RLG00000036399

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0003060
Physical Location & Seq
Forward (+)
79999847 .. 80001265
1419 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036399

Sequence Viewer

Length: 1068 bp
ATGGCGGTGGATGGAAATGACACCCAGAAGCCACACGTAGCGGTGCTATCAAGTCCGGGCATGGGTCACGTGACCCCTCTCCTCGAGCTAGCCAAACGGCTTGTCGTCGACCTCCGCTTCCAGGTCAAGGTCAAGGGAGATTATGGTAAAATCAAAGAGAGGGTTTTTATTCCAGGTTGCATGCCCTTGTGGGTTGACGATCTTCTCCCTGATGTTCTGGTACCAGAAGTCTTGCCTCTATGCAACCGGTTCCCACTGGTCAAGGGCATTTTCGTGAACACATGGGAAGAACTCGAGCCGGTACCGCTGAGCGCATTTAGAAACCACCCTTTCTTTGTCAATCTGCCGATGCCGACGGTTCATCCCATCGGACCCCTAACCAAAGACAAAGAGGCTGACGTGGAATCGGAGTTGCTGACGTGGCTGGACAAGCAGCCGTGTGACTCGGTTGTTTACTTGTCGTTCGGCAGCGGAGGGACGCTGTTGGCGGAGCAGACGGCGGAGTTGGCTCATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCGAGACCTCCCAGAGCCCATGGTGCTCCGGGAAGCTTCTTCCAAGCTGGTGGTGATGTTTCCCTTACGGCGGAGTCGTATTTGCCGGATGGGTTTCTGGAGAGGACACGAGGGGCGGGGCTGGTGACGGTGACGTGGGCCCCGCAAGTGTTGGTGTTGAGCCACCCCTCGGTGTGTGGGTTTGTGATGCACTGCGGATGGAACTCGGTGATGGAGAGCCTGGTGCACGGAGTGGCGATGGTGGCGTGGCCGCTTTATGCGGAACAGAAGATGAATGCGAGGGCGTTGGTGGAGATGGGAGTGGCGGTGAGGCCGGAGGCGGGAGAGGAGGGAGTTGTGGGGAGGGCGGAGGTGGAGAGGGTGGTGAGGTTGGTGGTGGAAGGCGAGGAAGGGAAGGAGATGAGGGGAAGGGTGAGAAAGATGCAGCAGAGTGCGGTGGAGGCTTTGGGTGGTGGTGGGTCGTCTGGCGGGTGTCTAAGTCGCTTGGGGAAGGAGTGGAGGGATGGAAGTACGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

356

Amino Acids

38.52

Weight (kDa)

5.78

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 117 - 316 4e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 220, 301
AccB1I GGYRCC 2 cut(s) 220, 301
AccI GTMKAC 1 cut(s) 108
AcoI YGGCCR 1 cut(s) 797
AcvI CACGTG 1 cut(s) 70
AdeI CACNNNGTG 1 cut(s) 781
AfaI GTAC 3 cut(s) 222, 303, 1060
AfiI CCNNNNNNNGG 7 cut(s) 62, 121, 127, 547, 619, 718, 869
AflIII ACRYGT 1 cut(s) 34
AgeI ACCGGT 1 cut(s) 246
AjiI CACGTC 3 cut(s) 400, 420, 684
AjnI CCWGG 3 cut(s) 120, 172, 768
AluBI AGCT 4 cut(s) 88, 523, 585, 596
AluI AGCT 4 cut(s) 88, 523, 585, 596
Alw21I GWGCWC 2 cut(s) 577, 777
Alw26I GTCTC 1 cut(s) 547
Alw44I GTGCAC 1 cut(s) 773
Ama87I CYCGRG 2 cut(s) 83, 293
AoxI GGCC 3 cut(s) 687, 797, 860
ApaI GGGCCC 1 cut(s) 691
ApaLI GTGCAC 1 cut(s) 773
ApeKI GCWGC 3 cut(s) 433, 468, 973
ArsI GACNNNNNNTTYG 2 cut(s) 87, 119
AsiGI ACCGGT 1 cut(s) 246
Asp718I GGTACC 2 cut(s) 220, 301
AspLEI GCGC 1 cut(s) 314
AspS9I GGNCC 3 cut(s) 371, 687, 688
AsuC2I CCSGG 2 cut(s) 57, 579
AsuHPI GGTGA 7 cut(s) 614, 685, 691, 769, 868, 925, 973
AsuNHI GCTAGC 1 cut(s) 88
AvaI CYCGRG 2 cut(s) 83, 293
AvaII GGWCC 1 cut(s) 371
BaeGI GKGCMC 2 cut(s) 691, 777
BanI GGYRCC 2 cut(s) 220, 301
BanII GRGCYC 2 cut(s) 568, 691
BauI CACGAG 1 cut(s) 657
BbrPI CACGTG 1 cut(s) 70
Bbv12I GWGCWC 2 cut(s) 577, 777
BbvI GCAGC 3 cut(s) 445, 480, 985
BccI CCATC 8 cut(s) 5, 374, 632, 741, 754, 781, 838, 1046
BceAI ACGGC 4 cut(s) 113, 421, 513, 633
BciT130I CCWGG 3 cut(s) 122, 174, 770
BcnI CCSGG 2 cut(s) 57, 579
BcoDI GTCTC 1 cut(s) 547
BfaI CTAG 1 cut(s) 89
BisI GCNGC 4 cut(s) 434, 469, 800, 974
BlpI GCTNAGC 1 cut(s) 308
BlsI GCNGC 4 cut(s) 435, 470, 801, 975
Bme1390I CCNGG 5 cut(s) 57, 122, 174, 579, 770
Bme18I GGWCC 1 cut(s) 371
BmeT110I CYCGRG 2 cut(s) 83, 293
BmgBI CACGTC 3 cut(s) 400, 420, 684
BmgT120I GGNCC 3 cut(s) 371, 687, 688
BmiI GGNNCC 6 cut(s) 222, 251, 303, 373, 689, 690
BmrFI CCNGG 5 cut(s) 57, 122, 174, 579, 770
BmsI GCATC 3 cut(s) 339, 726, 960
BmtI GCTAGC 1 cut(s) 92
BpmI CTGGAG 1 cut(s) 668
Bpu1102I GCTNAGC 1 cut(s) 308
BpuMI CCSGG 2 cut(s) 57, 579
BsaAI YACGTR 2 cut(s) 37, 70
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 2 cut(s) 568, 717
BsaWI WCCGGW 1 cut(s) 246
BsaXI ACNNNNNCTCC 2 cut(s) 840, 870
Bsc4I CCNNNNNNNGG 7 cut(s) 62, 121, 127, 547, 619, 718, 869
Bse118I RCCGGY 2 cut(s) 246, 298
Bse1I ACTGG 1 cut(s) 261
BseBI CCWGG 3 cut(s) 122, 174, 770
BseDI CCNNGG 2 cut(s) 568, 717
BseGI GGATG 5 cut(s) 16, 361, 643, 752, 1057
BseLI CCNNNNNNNGG 7 cut(s) 62, 121, 127, 547, 619, 718, 869
BseMII CTCAG 2 cut(s) 299, 515
BseNI ACTGG 1 cut(s) 261
BseRI GAGGAG 2 cut(s) 71, 890
BseSI GKGCMC 2 cut(s) 691, 777
BseXI GCAGC 3 cut(s) 445, 480, 985
BshFI GGCC 3 cut(s) 689, 799, 862
BshNI GGYRCC 2 cut(s) 220, 301
BshTI ACCGGT 1 cut(s) 246
BsiHKAI GWGCWC 2 cut(s) 577, 777
BsiHKCI CYCGRG 2 cut(s) 83, 293
BsiSI CCGG 6 cut(s) 56, 247, 299, 578, 635, 863
BslFI GGGAC 1 cut(s) 490
BslI CCNNNNNNNGG 7 cut(s) 62, 121, 127, 547, 619, 718, 869
BsmAI GTCTC 1 cut(s) 547
BsmFI GGGAC 1 cut(s) 490
BsmI GAATGC 1 cut(s) 829
BsnI GGCC 3 cut(s) 689, 799, 862
Bso31I GGTCTC 1 cut(s) 547
BsoBI CYCGRG 2 cut(s) 83, 293
Bsp120I GGGCCC 1 cut(s) 687
Bsp1286I GDGCHC 4 cut(s) 568, 577, 691, 777
Bsp143I GATC 1 cut(s) 199
Bsp1720I GCTNAGC 1 cut(s) 308
Bsp19I CCATGG 1 cut(s) 568
BspANI GGCC 3 cut(s) 689, 799, 862
BspCNI CTCAG 2 cut(s) 300, 516
BspLI GGNNCC 6 cut(s) 222, 251, 303, 373, 689, 690
BspOI GCTAGC 1 cut(s) 92
BspT107I GGYRCC 2 cut(s) 220, 301
BspTNI GGTCTC 1 cut(s) 547
BsrFI RCCGGY 2 cut(s) 246, 298
BsrI ACTGG 1 cut(s) 261
BssAI RCCGGY 2 cut(s) 246, 298
BssECI CCNNGG 2 cut(s) 568, 717
BssMI GATC 1 cut(s) 199
BssSI CACGAG 1 cut(s) 657
BssT1I CCWWGG 1 cut(s) 568
Bst2BI CACGAG 1 cut(s) 657
Bst2UI CCWGG 3 cut(s) 122, 174, 770
Bst4CI ACNGT 2 cut(s) 358, 679
BstBAI YACGTR 2 cut(s) 37, 70
BstC8I GCNNGC 2 cut(s) 90, 182
BstDEI CTNAG 3 cut(s) 308, 524, 1025
BstDSI CCRYGG 1 cut(s) 568
BstF5I GGATG 5 cut(s) 16, 361, 643, 752, 1057
BstHHI GCGC 1 cut(s) 314
BstKTI GATC 1 cut(s) 202
BstMAI GTCTC 1 cut(s) 547
BstMBI GATC 1 cut(s) 199
BstMWI GCNNNNNNNGC 7 cut(s) 304, 421, 430, 506, 572, 791, 989
BstNI CCWGG 3 cut(s) 122, 174, 770
BstNSI RCATGY 1 cut(s) 184
BstSCI CCNGG 5 cut(s) 55, 120, 172, 577, 768
BstSLI GKGCMC 2 cut(s) 691, 777
BstV1I GCAGC 3 cut(s) 445, 480, 985
BstXI CCANNNNNNTGG 1 cut(s) 599
BsuRI GGCC 3 cut(s) 689, 799, 862
BtgI CCRYGG 1 cut(s) 568
BtgZI GCGATG 1 cut(s) 800
BtrI CACGTC 3 cut(s) 400, 420, 684
BtsCI GGATG 5 cut(s) 16, 361, 643, 752, 1057
BtsI GCAGTG 1 cut(s) 739
BtsIMutI CAGTG 2 cut(s) 254, 739
Cac8I GCNNGC 2 cut(s) 90, 182
CfoI GCGC 1 cut(s) 314
Cfr10I RCCGGY 2 cut(s) 246, 298
Cfr13I GGNCC 3 cut(s) 371, 687, 688
CseI GACGC 1 cut(s) 487
Csp6I GTAC 3 cut(s) 221, 302, 1059
CspAI ACCGGT 1 cut(s) 246
CviAII CATG 5 cut(s) 61, 181, 282, 512, 569
CviQI GTAC 3 cut(s) 221, 302, 1059
DdeI CTNAG 3 cut(s) 308, 524, 1025
DpnI GATC 1 cut(s) 201
DpnII GATC 1 cut(s) 199
DraIII CACNNNGTG 1 cut(s) 781
EaeI YGGCCR 1 cut(s) 797
EciI GGCGGA 4 cut(s) 503, 515, 635, 911
Eco130I CCWWGG 1 cut(s) 568
Eco24I GRGCYC 2 cut(s) 568, 691
Eco31I GGTCTC 1 cut(s) 547
Eco47I GGWCC 1 cut(s) 371
Eco72I CACGTG 1 cut(s) 70
Eco88I CYCGRG 2 cut(s) 83, 293
EcoO109I RGGNCCY 1 cut(s) 688
EcoRII CCWGG 3 cut(s) 120, 172, 768
EcoT14I CCWWGG 1 cut(s) 568
EcoT38I GRGCYC 2 cut(s) 568, 691
ErhI CCWWGG 1 cut(s) 568
FaeI CATG 5 cut(s) 64, 184, 285, 515, 572
FaiI YATR 8 cut(s) 62, 144, 182, 241, 283, 513, 570, 807
FaqI GGGAC 1 cut(s) 490
FatI CATG 5 cut(s) 60, 180, 281, 511, 568
FauI CCCGC 4 cut(s) 658, 699, 862, 1010
FblI GTMKAC 1 cut(s) 108
Fnu4HI GCNGC 4 cut(s) 434, 469, 800, 974
FokI GGATG 5 cut(s) 23, 348, 650, 759, 1064
FriOI GRGCYC 2 cut(s) 568, 691
Fsp4HI GCNGC 4 cut(s) 434, 469, 800, 974
FspBI CTAG 1 cut(s) 89
GlaI GCGC 1 cut(s) 313
GluI GCNGC 4 cut(s) 434, 469, 800, 974
GsuI CTGGAG 1 cut(s) 668
HaeIII GGCC 3 cut(s) 689, 799, 862
HapII CCGG 6 cut(s) 56, 247, 299, 578, 635, 863
HgaI GACGC 1 cut(s) 487
HhaI GCGC 1 cut(s) 314
Hin1II CATG 5 cut(s) 64, 184, 285, 515, 572
Hin6I GCGC 1 cut(s) 312
HinP1I GCGC 1 cut(s) 312
HincII GTYRAC 2 cut(s) 109, 196
HindII GTYRAC 2 cut(s) 109, 196
HindIII AAGCTT 1 cut(s) 583
HinfI GANTC 4 cut(s) 404, 443, 537, 623
HpaII CCGG 6 cut(s) 56, 247, 299, 578, 635, 863
HphI GGTGA 7 cut(s) 614, 685, 691, 769, 868, 925, 973
Hpy166II GTNNAC 5 cut(s) 109, 196, 277, 454, 775
Hpy188I TCNGA 2 cut(s) 371, 409
Hpy188III TCNNGA 2 cut(s) 274, 647
Hpy8I GTNNAC 5 cut(s) 109, 196, 277, 454, 775
Hpy99I CGWCG 2 cut(s) 110, 358
HpyAV CCTTC 5 cut(s) 923, 932, 937, 951, 1033
HpyCH4III ACNGT 2 cut(s) 358, 679
HpyCH4IV ACGT 5 cut(s) 36, 69, 399, 419, 683
HpyCH4V TGCA 5 cut(s) 180, 243, 739, 775, 973
HpyF10VI GCNNNNNNNGC 7 cut(s) 304, 421, 430, 506, 572, 791, 989
HpyF3I CTNAG 3 cut(s) 308, 524, 1025
HpySE526I ACGT 5 cut(s) 36, 69, 399, 419, 683
Hsp92II CATG 5 cut(s) 64, 184, 285, 515, 572
HspAI GCGC 1 cut(s) 312
KpnI GGTACC 2 cut(s) 224, 305
Kzo9I GATC 1 cut(s) 199
LmnI GCTCC 3 cut(s) 490, 520, 580
Lsp1109I GCAGC 3 cut(s) 445, 480, 985
LweI GCATC 3 cut(s) 339, 726, 960
MaeI CTAG 1 cut(s) 89
MaeII ACGT 5 cut(s) 36, 69, 399, 419, 683
MaeIII GTNAC 5 cut(s) 65, 70, 440, 673, 679
MalI GATC 1 cut(s) 201
MboI GATC 1 cut(s) 199
MboII GAAGA 4 cut(s) 194, 299, 580, 829
MhlI GDGCHC 4 cut(s) 568, 577, 691, 777
MlyI GAGTC 2 cut(s) 437, 632
MmeI TCCRAC 1 cut(s) 498
MslI CAYNNNNRTG 1 cut(s) 272
MspA1I CMGCKG 2 cut(s) 307, 471
MspI CCGG 6 cut(s) 56, 247, 299, 578, 635, 863
MspR9I CCNGG 5 cut(s) 57, 122, 174, 579, 770
Mva1269I GAATGC 1 cut(s) 829
MvaI CCWGG 3 cut(s) 122, 174, 770
MwoI GCNNNNNNNGC 7 cut(s) 304, 421, 430, 506, 572, 791, 989
NciI CCSGG 2 cut(s) 57, 579
NcoI CCATGG 1 cut(s) 568
NdeII GATC 1 cut(s) 199
NheI GCTAGC 1 cut(s) 88
NlaIII CATG 5 cut(s) 64, 184, 285, 515, 572
NlaIV GGNNCC 6 cut(s) 222, 251, 303, 373, 689, 690
NmuCI GTSAC 5 cut(s) 65, 70, 440, 673, 679
NspI RCATGY 1 cut(s) 184
PaeI GCATGC 1 cut(s) 184
PaeR7I CTCGAG 2 cut(s) 83, 293
PcsI WCGNNNNNNNCGW 1 cut(s) 623
PctI GAATGC 1 cut(s) 829
PfeI GAWTC 2 cut(s) 404, 537
PfoI TCCNGGA 1 cut(s) 577
PinAI ACCGGT 1 cut(s) 246
PkrI GCNGC 4 cut(s) 435, 470, 801, 975
PleI GAGTC 2 cut(s) 437, 631
PmaCI CACGTG 1 cut(s) 70
PmlI CACGTG 1 cut(s) 70
PpsI GAGTC 2 cut(s) 437, 631
Ppu21I YACGTR 2 cut(s) 37, 70
Psp6I CCWGG 3 cut(s) 120, 172, 768
PspCI CACGTG 1 cut(s) 70
PspGI CCWGG 3 cut(s) 120, 172, 768
PspN4I GGNNCC 6 cut(s) 222, 251, 303, 373, 689, 690
PspOMI GGGCCC 1 cut(s) 687
PspPI GGNCC 3 cut(s) 371, 687, 688
PspXI VCTCGAGB 2 cut(s) 83, 293
RsaI GTAC 3 cut(s) 222, 303, 1060
RsaNI GTAC 3 cut(s) 221, 302, 1059
RseI CAYNNNNRTG 1 cut(s) 272
SalI GTCGAC 1 cut(s) 107
SatI GCNGC 4 cut(s) 434, 469, 800, 974
Sau3AI GATC 1 cut(s) 199
Sau96I GGNCC 3 cut(s) 371, 687, 688
SchI GAGTC 2 cut(s) 437, 632
ScrFI CCNGG 5 cut(s) 57, 122, 174, 579, 770
SduI GDGCHC 4 cut(s) 568, 577, 691, 777
SfaNI GCATC 3 cut(s) 339, 726, 960
Sfr274I CTCGAG 2 cut(s) 83, 293
SinI GGWCC 1 cut(s) 371
SlaI CTCGAG 2 cut(s) 83, 293
SmiMI CAYNNNNRTG 1 cut(s) 272
SmlI CTYRAG 2 cut(s) 83, 293
SmoI CTYRAG 2 cut(s) 83, 293
SphI GCATGC 1 cut(s) 184
SspMI CTAG 1 cut(s) 89
StyD4I CCNGG 5 cut(s) 55, 120, 172, 577, 768
StyI CCWWGG 1 cut(s) 568
TaaI ACNGT 2 cut(s) 358, 679
TaiI ACGT 5 cut(s) 39, 72, 402, 422, 686
TaqI TCGA 3 cut(s) 84, 108, 294
TauI GCSGC 1 cut(s) 802
TfiI GAWTC 2 cut(s) 404, 537
TscAI CASTG 2 cut(s) 261, 746
TseFI GTSAC 5 cut(s) 65, 70, 440, 673, 679
TseI GCWGC 3 cut(s) 433, 468, 973
Tsp45I GTSAC 5 cut(s) 65, 70, 440, 673, 679
TspDTI ATGAA 2 cut(s) 350, 836
TspGWI ACGGA 1 cut(s) 792
TspRI CASTG 2 cut(s) 261, 746
VneI GTGCAC 1 cut(s) 773
VpaK11BI GGWCC 1 cut(s) 371
XceI RCATGY 1 cut(s) 184
XhoI CTCGAG 2 cut(s) 83, 293
XmiI GTMKAC 1 cut(s) 108
XspI CTAG 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.