Rh5CG526900

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003060
Physical Location & Seq
Forward (+)
73696552 .. 73697121
570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG526900.1

Sequence Viewer

Length: 570 bp
ATGGCGGAGTTGGCTCATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGTGAGACCTCTTGGAGCGGATGGTGCTTCGGGAAGCTTCTTCGAAGCTGGTGGTGATGTTTCCCTTACGGCGTCGTATTTTCCGGATGGGTTTCTGGAGAGGACACGAGGGGAGGGGCTAGTGACGGTGACTTGGGCCCCGCAAGTGGCGGTGTTGAGCCACCCCTCAGTGTGTGGGTTTGTGACGCACTGCGGGTGGAACTCGGTGATGGAGAGTGTGGTGCACGGGGTGGCGATGGTGGCGTGGCCGCTTTACGCTAAACAGAAGATGAATGCGAGGGCGTTGGTGGAGATGGGAGTGGCGGTGGTGTTGGAGGCGGGAGATGAGGGAGTTGTGGGGAAGGCGGAGGTAGAGAGGGTTGTGTGGTTGGTGGTGGAAGGCGAGGAAGGGAAGGAGATAAGGGGGAGGGTGAGAAAGATGCAGCAGAGTGCGGTGAAGGCTTTGGATGGTGGTGGGTCATCTGGCGGGTGTCTAAGTCGCTTGGGGAAGGAGTGGTGGGATAGAAGTACGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

189

Amino Acids

20.15

Weight (kDa)

5.83

Isoelectric Point (pI)

28.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 59 - 150 6.1e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 71
AccIII TCCGGA 1 cut(s) 136
AcoI YGGCCR 1 cut(s) 299
AcyI GRCGYC 1 cut(s) 125
AdeI CACNNNGTG 1 cut(s) 283
AfaI GTAC 1 cut(s) 562
AfiI CCNNNNNNNGG 2 cut(s) 52, 199
AluBI AGCT 3 cut(s) 28, 90, 101
AluI AGCT 3 cut(s) 28, 90, 101
Alw21I GWGCWC 1 cut(s) 279
Alw26I GTCTC 1 cut(s) 52
Alw44I GTGCAC 1 cut(s) 275
Aor13HI TCCGGA 1 cut(s) 136
AoxI GGCC 2 cut(s) 189, 299
ApaI GGGCCC 1 cut(s) 193
ApaLI GTGCAC 1 cut(s) 275
ApeKI GCWGC 1 cut(s) 475
AspS9I GGNCC 2 cut(s) 189, 190
AsuHPI GGTGA 6 cut(s) 67, 119, 193, 271, 475, 499
AsuII TTCGAA 1 cut(s) 96
BaeGI GKGCMC 2 cut(s) 193, 279
BanII GRGCYC 1 cut(s) 193
BauI CACGAG 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 279
BbvI GCAGC 1 cut(s) 487
BccI CCATC 6 cut(s) 68, 134, 256, 283, 340, 494
BceAI ACGGC 1 cut(s) 138
BcoDI GTCTC 1 cut(s) 52
BfaI CTAG 1 cut(s) 173
BisI GCNGC 2 cut(s) 302, 476
BlsI GCNGC 2 cut(s) 303, 477
BmgT120I GGNCC 2 cut(s) 189, 190
BmiI GGNNCC 2 cut(s) 191, 192
BmsI GCATC 1 cut(s) 462
BpmI CTGGAG 1 cut(s) 170
Bpu14I TTCGAA 1 cut(s) 96
BsaHI GRCGYC 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 52
BsaWI WCCGGW 1 cut(s) 136
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 2 cut(s) 52, 199
BseAI TCCGGA 1 cut(s) 136
BseGI GGATG 3 cut(s) 79, 145, 505
BseLI CCNNNNNNNGG 2 cut(s) 52, 199
BseMII CTCAG 2 cut(s) 20, 234
BseSI GKGCMC 2 cut(s) 193, 279
BseXI GCAGC 1 cut(s) 487
BshFI GGCC 2 cut(s) 191, 301
BsiHKAI GWGCWC 1 cut(s) 279
BsiSI CCGG 1 cut(s) 137
BslI CCNNNNNNNGG 2 cut(s) 52, 199
BsmAI GTCTC 1 cut(s) 52
BsmI GAATGC 1 cut(s) 331
BsnI GGCC 2 cut(s) 191, 301
Bso31I GGTCTC 1 cut(s) 52
Bsp119I TTCGAA 1 cut(s) 96
Bsp120I GGGCCC 1 cut(s) 189
Bsp1286I GDGCHC 2 cut(s) 193, 279
Bsp13I TCCGGA 1 cut(s) 136
BspANI GGCC 2 cut(s) 191, 301
BspCNI CTCAG 2 cut(s) 21, 233
BspEI TCCGGA 1 cut(s) 136
BspLI GGNNCC 2 cut(s) 191, 192
BspT104I TTCGAA 1 cut(s) 96
BspTNI GGTCTC 1 cut(s) 52
BsrBI CCGCTC 1 cut(s) 71
BssNI GRCGYC 1 cut(s) 125
BssSI CACGAG 1 cut(s) 159
Bst2BI CACGAG 1 cut(s) 159
Bst4CI ACNGT 1 cut(s) 181
BstACI GRCGYC 1 cut(s) 125
BstBI TTCGAA 1 cut(s) 96
BstDEI CTNAG 3 cut(s) 29, 220, 527
BstF5I GGATG 3 cut(s) 79, 145, 505
BstMAI GTCTC 1 cut(s) 52
BstMWI GCNNNNNNNGC 4 cut(s) 11, 77, 293, 491
BstSLI GKGCMC 2 cut(s) 193, 279
BstV1I GCAGC 1 cut(s) 487
BsuRI GGCC 2 cut(s) 191, 301
BtgZI GCGATG 1 cut(s) 302
BtsCI GGATG 3 cut(s) 79, 145, 505
BtsI GCAGTG 1 cut(s) 241
BtsIMutI CAGTG 2 cut(s) 228, 241
Cfr13I GGNCC 2 cut(s) 189, 190
CseI GACGC 2 cut(s) 114, 247
Csp6I GTAC 1 cut(s) 561
CviAII CATG 1 cut(s) 17
CviJI RGCY 9 cut(s) 14, 28, 90, 101, 172, 191, 213, 301, 494
CviKI_1 RGCY 9 cut(s) 14, 28, 90, 101, 172, 191, 213, 301, 494
CviQI GTAC 1 cut(s) 561
DdeI CTNAG 3 cut(s) 29, 220, 527
DraIII CACNNNGTG 1 cut(s) 283
EaeI YGGCCR 1 cut(s) 299
EciI GGCGGA 2 cut(s) 20, 413
Eco24I GRGCYC 1 cut(s) 193
Eco31I GGTCTC 1 cut(s) 52
EcoO109I RGGNCCY 1 cut(s) 190
EcoT38I GRGCYC 1 cut(s) 193
FaeI CATG 1 cut(s) 20
FaiI YATR 1 cut(s) 18
FatI CATG 1 cut(s) 16
FauI CCCGC 4 cut(s) 201, 239, 364, 512
Fnu4HI GCNGC 2 cut(s) 302, 476
FokI GGATG 3 cut(s) 86, 152, 512
FriOI GRGCYC 1 cut(s) 193
Fsp4HI GCNGC 2 cut(s) 302, 476
FspBI CTAG 1 cut(s) 173
GluI GCNGC 2 cut(s) 302, 476
GsuI CTGGAG 1 cut(s) 170
HaeIII GGCC 2 cut(s) 191, 301
HapII CCGG 1 cut(s) 137
HgaI GACGC 2 cut(s) 114, 247
Hin1I GRCGYC 1 cut(s) 125
Hin1II CATG 1 cut(s) 20
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 1 cut(s) 42
HpaII CCGG 1 cut(s) 137
HphI GGTGA 6 cut(s) 67, 119, 193, 271, 475, 499
Hpy166II GTNNAC 1 cut(s) 277
Hpy188III TCNNGA 3 cut(s) 84, 137, 149
Hpy8I GTNNAC 1 cut(s) 277
Hpy99I CGWCG 1 cut(s) 130
HpyAV CCTTC 6 cut(s) 388, 425, 434, 439, 484, 535
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4V TGCA 2 cut(s) 277, 475
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 77, 293, 491
HpyF3I CTNAG 3 cut(s) 29, 220, 527
Hsp92I GRCGYC 1 cut(s) 125
Hsp92II CATG 1 cut(s) 20
Kpn2I TCCGGA 1 cut(s) 136
LmnI GCTCC 2 cut(s) 25, 68
LpnPI CCDG 5 cut(s) 34, 87, 134, 150, 501
Lsp1109I GCAGC 1 cut(s) 487
LweI GCATC 1 cut(s) 462
MaeI CTAG 1 cut(s) 173
MaeIII GTNAC 3 cut(s) 175, 181, 235
MbiI CCGCTC 1 cut(s) 71
MboII GAAGA 2 cut(s) 85, 331
MhlI GDGCHC 2 cut(s) 193, 279
MmeI TCCRAC 1 cut(s) 345
MroI TCCGGA 1 cut(s) 136
MspI CCGG 1 cut(s) 137
Mva1269I GAATGC 1 cut(s) 331
MwoI GCNNNNNNNGC 4 cut(s) 11, 77, 293, 491
NlaIII CATG 1 cut(s) 20
NlaIV GGNNCC 2 cut(s) 191, 192
NmuCI GTSAC 3 cut(s) 175, 181, 235
NspV TTCGAA 1 cut(s) 96
PctI GAATGC 1 cut(s) 331
PfeI GAWTC 1 cut(s) 42
PkrI GCNGC 2 cut(s) 303, 477
PspN4I GGNNCC 2 cut(s) 191, 192
PspOMI GGGCCC 1 cut(s) 189
PspPI GGNCC 2 cut(s) 189, 190
RsaI GTAC 1 cut(s) 562
RsaNI GTAC 1 cut(s) 561
SatI GCNGC 2 cut(s) 302, 476
Sau96I GGNCC 2 cut(s) 189, 190
SduI GDGCHC 2 cut(s) 193, 279
SetI ASST 5 cut(s) 30, 64, 92, 103, 405
SfaNI GCATC 1 cut(s) 462
SfuI TTCGAA 1 cut(s) 96
SspMI CTAG 1 cut(s) 173
TaaI ACNGT 1 cut(s) 181
TaqI TCGA 1 cut(s) 96
TauI GCSGC 1 cut(s) 304
TfiI GAWTC 1 cut(s) 42
TscAI CASTG 2 cut(s) 228, 248
TseFI GTSAC 3 cut(s) 175, 181, 235
TseI GCWGC 1 cut(s) 475
Tsp45I GTSAC 3 cut(s) 175, 181, 235
TspDTI ATGAA 1 cut(s) 338
TspRI CASTG 2 cut(s) 228, 248
VneI GTGCAC 1 cut(s) 275
XspI CTAG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.