Rh5BG503100

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0003060
Physical Location & Seq
Forward (+)
79952249 .. 79954095
1847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG503100.1

Sequence Viewer

Length: 1482 bp
ATGTTGGGATATTTTATGAATTACAATTCAAATTTCCTCGAATACTTTTGCACCTTCAACAAGGTGATGGCGGTGGATGAAGAACACACCCAGAAGCCGCACGTAGCGATGCTATCAAGTCCGGGCGTGGGTCACGTGACCCCTCTCCTCGAGCTAGCCAAACGGCTGGTCGTCGACCTCGGCTTCCAGGTCAGCTTCCTTGCAATCACCACCGATGCACCACCCGCGCAGCTTCAGTTGCTCAACAACAACCCCACCCTCCCTTCCGATCTCCACGTCATCCACCTCCCTCATGTTGATGTGTCAAGCAACGACGTCATAGCAATTCGGATCGTTCAAATTGTCCGAGAGAGCCTTCGTTCACTGCCCTCGGTGCTAACCAACTTACACTCACATAAACCGCCGCTAAAAGCTCTGATCGTCGATCCGTTTTGCATCGAAGCCCTCGAAACCGCCGCCGACCACTCTATCCCAACGTATCTTTTCTTGACCGCCTCCGCCTCATTTCTGGCGTTGACCATCTACTTCCCTACGCTTCATGCAGATGTCAAGGGAGACTACGGTAAAATCAAAGAGAGTGTTTTTCTTCCAGGTTGCATGCCCTTGTGGGTTGACGATCTTCTCCCTGATGTTCTGATACCAGAAGTCTTGCCTCTGTGCAACCGGATCCCACTGGTCAAGGGTATTTTCGTAAACACATGGGAAGAAATCGAGCCGGTAACGCTGAGCGCATTTAGAAACCACCCTTTCTTTGTCAATCTGCCGACGCCGACGATTCATCCCATCGGACCCCTAACCAAAGACAAAGACGCTGACGTAGAATCGGAGTTGCTCAAGTGGCTGGACAAGCAGCCGTGTGACTCGGTTGTTTACGTGTCATTCGGCAGCGGAGGGACGCTGTCGGCGGAGCAGATGACGGAGTTGGCTCATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCAAGACCTCCCAGAGCCGATGATGCTTCGGGAAGCTTCTTCGAAGCTGGTGTTGATGGTGCCCTTACGGCGTCGTATCTACCGGATGGGTTTTCGGAGAGGACACGAGGGGCAGGGCTGGTGACGGCGACGTGGGCCCCGCAAGTGGCGGTGTTGAGCCACCCCTCGGTGTGTGGGTTTGTGACGCACTGCGGGTGGAACTCGGTGATGGAGAGCGTGGTGCACGGGGTGGTGATGGTGGCTTGGCCGCTTTATGCAGAGCAGAAGATGAATGCAAGGGCATTGGTAGAGATGGGAGTGGCGGTGAGGCCGGAGGCGGGAGGGGATGGAGTTGTGGGCAGGGGGGAGGTGGAGAGGGTGGTGAGGATGGTGGTGGAAGGCGAAGAAGGGAAGGAGATGAGGAGGAGTGTGAGGGAGATGCAACGGAGTGCAGTGGAGGCTTTGGGTGGTGGTGGGTCGTCTAGTGGGCGTCTAAGTCGCTTGGGGAAGGAGTGGAGGGATGGAAGTACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

493

Amino Acids

53.78

Weight (kDa)

5.46

Isoelectric Point (pI)

33.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 260 - 428 2.4e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 318
AccB1I GGYRCC 1 cut(s) 1025
AccI GTMKAC 1 cut(s) 174
AccII CGCG 1 cut(s) 227
AclWI GGATC 4 cut(s) 338, 419, 661, 674
AcoI YGGCCR 1 cut(s) 1211
AcsI RAATTY 1 cut(s) 31
AcuI CTGAAG 1 cut(s) 218
AcvI CACGTG 1 cut(s) 136
AcyI GRCGYC 4 cut(s) 315, 767, 1037, 1435
AdeI CACNNNGTG 1 cut(s) 1195
AfaI GTAC 1 cut(s) 1474
AfiI CCNNNNNNNGG 5 cut(s) 128, 964, 1111, 1132, 1283
AflIII ACRYGT 1 cut(s) 873
AgsI TTSAA 3 cut(s) 30, 58, 338
AjiI CACGTC 2 cut(s) 277, 1098
AjnI CCWGG 2 cut(s) 186, 589
AluBI AGCT 7 cut(s) 154, 195, 232, 413, 940, 1002, 1013
AluI AGCT 7 cut(s) 154, 195, 232, 413, 940, 1002, 1013
Alw21I GWGCWC 1 cut(s) 1191
Alw26I GTCTC 1 cut(s) 549
Alw44I GTGCAC 1 cut(s) 1187
AlwI GGATC 4 cut(s) 338, 419, 661, 674
Ama87I CYCGRG 1 cut(s) 149
AoxI GGCC 3 cut(s) 1101, 1211, 1274
ApaI GGGCCC 1 cut(s) 1105
ApaLI GTGCAC 1 cut(s) 1187
ApeKI GCWGC 3 cut(s) 229, 850, 885
ApoI RAATTY 1 cut(s) 31
ArsI GACNNNNNNTTYG 2 cut(s) 153, 185
AspLEI GCGC 2 cut(s) 229, 731
AspS9I GGNCC 3 cut(s) 788, 1101, 1102
AsuC2I CCSGG 1 cut(s) 123
AsuHPI GGTGA 7 cut(s) 76, 199, 1099, 1183, 1210, 1282, 1339
AsuII TTCGAA 1 cut(s) 1008
AsuNHI GCTAGC 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 149
AvaII GGWCC 1 cut(s) 788
BaeGI GKGCMC 3 cut(s) 1030, 1105, 1191
BamHI GGATCC 1 cut(s) 666
BanI GGYRCC 1 cut(s) 1025
BanII GRGCYC 1 cut(s) 1105
BauI CACGAG 1 cut(s) 1071
BbrPI CACGTG 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 1191
BbvI GCAGC 3 cut(s) 241, 862, 897
BceAI ACGGC 4 cut(s) 179, 838, 1050, 1107
BciT130I CCWGG 2 cut(s) 188, 591
BcnI CCSGG 1 cut(s) 123
BcoDI GTCTC 1 cut(s) 549
BfaI CTAG 2 cut(s) 155, 1428
BglI GCCNNNNNGGC 1 cut(s) 1034
BisI GCNGC 7 cut(s) 98, 230, 404, 456, 851, 886, 1214
BlpI GCTNAGC 1 cut(s) 725
BlsI GCNGC 7 cut(s) 99, 231, 405, 457, 852, 887, 1215
Bme1390I CCNGG 3 cut(s) 123, 188, 591
Bme18I GGWCC 1 cut(s) 788
BmeT110I CYCGRG 1 cut(s) 149
BmgBI CACGTC 2 cut(s) 277, 1098
BmgT120I GGNCC 3 cut(s) 788, 1101, 1102
BmiI GGNNCC 5 cut(s) 668, 790, 1027, 1103, 1104
BmrFI CCNGG 3 cut(s) 123, 188, 591
BmsI GCATC 5 cut(s) 99, 205, 444, 979, 1374
BmtI GCTAGC 1 cut(s) 158
Bpu1102I GCTNAGC 1 cut(s) 725
Bpu14I TTCGAA 1 cut(s) 1008
BpuEI CTTGAG 1 cut(s) 818
BpuMI CCSGG 1 cut(s) 123
BsaAI YACGTR 3 cut(s) 103, 136, 874
BsaHI GRCGYC 4 cut(s) 315, 767, 1037, 1435
BsaJI CCNNGG 3 cut(s) 178, 369, 1131
BsaWI WCCGGW 2 cut(s) 663, 1048
BsaXI ACNNNNNCTCC 2 cut(s) 1254, 1284
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 964, 1111, 1132, 1283
Bse118I RCCGGY 1 cut(s) 715
Bse1I ACTGG 1 cut(s) 678
BseBI CCWGG 2 cut(s) 188, 591
BseDI CCNNGG 3 cut(s) 178, 369, 1131
BseGI GGATG 7 cut(s) 82, 279, 778, 1057, 1297, 1338, 1471
BseLI CCNNNNNNNGG 5 cut(s) 128, 964, 1111, 1132, 1283
BseMII CTCAG 2 cut(s) 716, 932
BseNI ACTGG 1 cut(s) 678
BseRI GAGGAG 3 cut(s) 137, 1381, 1384
BseSI GKGCMC 3 cut(s) 1030, 1105, 1191
BseXI GCAGC 3 cut(s) 241, 862, 897
BsgI GTGCAG 1 cut(s) 1416
Bsh1236I CGCG 1 cut(s) 227
BshFI GGCC 3 cut(s) 1103, 1213, 1276
BshNI GGYRCC 1 cut(s) 1025
BsiHKAI GWGCWC 1 cut(s) 1191
BsiHKCI CYCGRG 1 cut(s) 149
BsiSI CCGG 5 cut(s) 122, 664, 716, 1049, 1277
BslFI GGGAC 1 cut(s) 907
BslI CCNNNNNNNGG 5 cut(s) 128, 964, 1111, 1132, 1283
BsmAI GTCTC 1 cut(s) 549
BsmFI GGGAC 1 cut(s) 907
BsmI GAATGC 1 cut(s) 1243
BsnI GGCC 3 cut(s) 1103, 1213, 1276
BsoBI CYCGRG 1 cut(s) 149
Bsp119I TTCGAA 1 cut(s) 1008
Bsp120I GGGCCC 1 cut(s) 1101
Bsp1286I GDGCHC 3 cut(s) 1030, 1105, 1191
Bsp143I GATC 6 cut(s) 268, 330, 417, 424, 616, 666
Bsp1720I GCTNAGC 1 cut(s) 725
BspANI GGCC 3 cut(s) 1103, 1213, 1276
BspCNI CTCAG 2 cut(s) 717, 933
BspFNI CGCG 1 cut(s) 227
BspLI GGNNCC 5 cut(s) 668, 790, 1027, 1103, 1104
BspOI GCTAGC 1 cut(s) 158
BspPI GGATC 4 cut(s) 338, 419, 661, 674
BspT104I TTCGAA 1 cut(s) 1008
BspT107I GGYRCC 1 cut(s) 1025
BsrFI RCCGGY 1 cut(s) 715
BsrI ACTGG 1 cut(s) 678
BssAI RCCGGY 1 cut(s) 715
BssECI CCNNGG 3 cut(s) 178, 369, 1131
BssMI GATC 6 cut(s) 268, 330, 417, 424, 616, 666
BssNI GRCGYC 4 cut(s) 315, 767, 1037, 1435
BssSI CACGAG 1 cut(s) 1071
Bst2BI CACGAG 1 cut(s) 1071
Bst2UI CCWGG 2 cut(s) 188, 591
Bst4CI ACNGT 1 cut(s) 563
BstACI GRCGYC 4 cut(s) 315, 767, 1037, 1435
BstBAI YACGTR 3 cut(s) 103, 136, 874
BstBI TTCGAA 1 cut(s) 1008
BstC8I GCNNGC 2 cut(s) 156, 599
BstDEI CTNAG 3 cut(s) 725, 941, 1439
BstF5I GGATG 7 cut(s) 82, 279, 778, 1057, 1297, 1338, 1471
BstFNI CGCG 1 cut(s) 227
BstHHI GCGC 2 cut(s) 229, 731
BstKTI GATC 6 cut(s) 271, 333, 420, 427, 619, 669
BstMAI GTCTC 1 cut(s) 549
BstMBI GATC 6 cut(s) 268, 330, 417, 424, 616, 666
BstNI CCWGG 2 cut(s) 188, 591
BstNSI RCATGY 1 cut(s) 601
BstSCI CCNGG 3 cut(s) 121, 186, 589
BstSLI GKGCMC 3 cut(s) 1030, 1105, 1191
BstUI CGCG 1 cut(s) 227
BstV1I GCAGC 3 cut(s) 241, 862, 897
BstX2I RGATCY 1 cut(s) 666
BstXI CCANNNNNNTGG 1 cut(s) 166
BstYI RGATCY 1 cut(s) 666
BsuRI GGCC 3 cut(s) 1103, 1213, 1276
BtgZI GCGATG 1 cut(s) 122
BtrI CACGTC 2 cut(s) 277, 1098
BtsCI GGATG 7 cut(s) 82, 279, 778, 1057, 1297, 1338, 1471
BtsI GCAGTG 3 cut(s) 362, 1153, 1404
BtsIMutI CAGTG 4 cut(s) 362, 671, 1153, 1404
Cac8I GCNNGC 2 cut(s) 156, 599
CfoI GCGC 2 cut(s) 229, 731
Cfr10I RCCGGY 1 cut(s) 715
Cfr13I GGNCC 3 cut(s) 788, 1101, 1102
CseI GACGC 6 cut(s) 775, 818, 904, 1026, 1159, 1424
Csp6I GTAC 1 cut(s) 1473
CviAII CATG 5 cut(s) 293, 539, 598, 699, 929
CviQI GTAC 1 cut(s) 1473
DdeI CTNAG 3 cut(s) 725, 941, 1439
DpnI GATC 6 cut(s) 270, 332, 419, 426, 618, 668
DpnII GATC 6 cut(s) 268, 330, 417, 424, 616, 666
DraIII CACNNNGTG 1 cut(s) 1195
EaeI YGGCCR 1 cut(s) 1211
EciI GGCGGA 2 cut(s) 487, 920
Eco24I GRGCYC 1 cut(s) 1105
Eco47I GGWCC 1 cut(s) 788
Eco57I CTGAAG 1 cut(s) 218
Eco72I CACGTG 1 cut(s) 136
Eco88I CYCGRG 1 cut(s) 149
EcoO109I RGGNCCY 1 cut(s) 1102
EcoRII CCWGG 2 cut(s) 186, 589
EcoT38I GRGCYC 1 cut(s) 1105
FaeI CATG 5 cut(s) 296, 542, 601, 702, 932
FaiI YATR 9 cut(s) 17, 294, 320, 396, 540, 599, 700, 930, 1221
FaqI GGGAC 1 cut(s) 907
FatI CATG 5 cut(s) 292, 538, 597, 698, 928
FauI CCCGC 4 cut(s) 232, 1113, 1151, 1276
FblI GTMKAC 1 cut(s) 174
Fnu4HI GCNGC 7 cut(s) 98, 230, 404, 456, 851, 886, 1214
FokI GGATG 7 cut(s) 89, 266, 765, 1064, 1304, 1345, 1478
FriOI GRGCYC 1 cut(s) 1105
Fsp4HI GCNGC 7 cut(s) 98, 230, 404, 456, 851, 886, 1214
FspBI CTAG 2 cut(s) 155, 1428
GlaI GCGC 2 cut(s) 228, 730
GluI GCNGC 7 cut(s) 98, 230, 404, 456, 851, 886, 1214
HaeIII GGCC 3 cut(s) 1103, 1213, 1276
HapII CCGG 5 cut(s) 122, 664, 716, 1049, 1277
HgaI GACGC 6 cut(s) 775, 818, 904, 1026, 1159, 1424
HhaI GCGC 2 cut(s) 229, 731
Hin1I GRCGYC 4 cut(s) 315, 767, 1037, 1435
Hin1II CATG 5 cut(s) 296, 542, 601, 702, 932
Hin6I GCGC 2 cut(s) 227, 729
HinP1I GCGC 2 cut(s) 227, 729
HincII GTYRAC 3 cut(s) 175, 516, 613
HindII GTYRAC 3 cut(s) 175, 516, 613
HindIII AAGCTT 1 cut(s) 1000
HinfI GANTC 4 cut(s) 775, 821, 860, 954
HpaII CCGG 5 cut(s) 122, 664, 716, 1049, 1277
HphI GGTGA 7 cut(s) 76, 199, 1099, 1183, 1210, 1282, 1339
Hpy166II GTNNAC 7 cut(s) 175, 362, 516, 613, 694, 871, 1189
Hpy188I TCNGA 8 cut(s) 268, 330, 347, 417, 636, 788, 826, 1063
Hpy188III TCNNGA 2 cut(s) 487, 996
Hpy8I GTNNAC 7 cut(s) 175, 362, 516, 613, 694, 871, 1189
Hpy99I CGWCG 7 cut(s) 176, 317, 425, 769, 775, 1042, 1099
HpyAV CCTTC 7 cut(s) 64, 273, 365, 1337, 1346, 1351, 1447
HpyCH4III ACNGT 1 cut(s) 563
HpyCH4IV ACGT 8 cut(s) 102, 135, 276, 315, 476, 816, 873, 1097
HpyF3I CTNAG 3 cut(s) 725, 941, 1439
HpySE526I ACGT 8 cut(s) 102, 135, 276, 315, 476, 816, 873, 1097
Hsp92I GRCGYC 4 cut(s) 315, 767, 1037, 1435
Hsp92II CATG 5 cut(s) 296, 542, 601, 702, 932
HspAI GCGC 2 cut(s) 227, 729
Kzo9I GATC 6 cut(s) 268, 330, 417, 424, 616, 666
LmnI GCTCC 2 cut(s) 907, 937
Lsp1109I GCAGC 3 cut(s) 241, 862, 897
LweI GCATC 5 cut(s) 99, 205, 444, 979, 1374
MaeI CTAG 2 cut(s) 155, 1428
MaeII ACGT 8 cut(s) 102, 135, 276, 315, 476, 816, 873, 1097
MaeIII GTNAC 6 cut(s) 131, 136, 718, 857, 1087, 1147
MalI GATC 6 cut(s) 270, 332, 419, 426, 618, 668
MboI GATC 6 cut(s) 268, 330, 417, 424, 616, 666
MboII GAAGA 7 cut(s) 92, 578, 611, 716, 997, 1243, 1361
MflI RGATCY 1 cut(s) 666
MhlI GDGCHC 3 cut(s) 1030, 1105, 1191
MluCI AATT 5 cut(s) 19, 25, 31, 324, 339
MlyI GAGTC 1 cut(s) 854
MmeI TCCRAC 1 cut(s) 915
MslI CAYNNNNRTG 2 cut(s) 297, 543
MspA1I CMGCKG 1 cut(s) 888
MspI CCGG 5 cut(s) 122, 664, 716, 1049, 1277
MspR9I CCNGG 3 cut(s) 123, 188, 591
Mva1269I GAATGC 1 cut(s) 1243
MvaI CCWGG 2 cut(s) 188, 591
MvnI CGCG 1 cut(s) 227
NciI CCSGG 1 cut(s) 123
NdeII GATC 6 cut(s) 268, 330, 417, 424, 616, 666
NheI GCTAGC 1 cut(s) 154
NlaIII CATG 5 cut(s) 296, 542, 601, 702, 932
NlaIV GGNNCC 5 cut(s) 668, 790, 1027, 1103, 1104
NmeAIII GCCGAG 1 cut(s) 159
NmuCI GTSAC 5 cut(s) 131, 136, 857, 1087, 1147
NspI RCATGY 1 cut(s) 601
NspV TTCGAA 1 cut(s) 1008
PaeI GCATGC 1 cut(s) 601
PaeR7I CTCGAG 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 444
PctI GAATGC 1 cut(s) 1243
PfeI GAWTC 3 cut(s) 775, 821, 954
PflFI GACNNNGTC 1 cut(s) 898
PkrI GCNGC 7 cut(s) 99, 231, 405, 457, 852, 887, 1215
PleI GAGTC 1 cut(s) 854
PmaCI CACGTG 1 cut(s) 136
PmlI CACGTG 1 cut(s) 136
PpsI GAGTC 1 cut(s) 854
Ppu21I YACGTR 3 cut(s) 103, 136, 874
Psp6I CCWGG 2 cut(s) 186, 589
PspCI CACGTG 1 cut(s) 136
PspGI CCWGG 2 cut(s) 186, 589
PspN4I GGNNCC 5 cut(s) 668, 790, 1027, 1103, 1104
PspOMI GGGCCC 1 cut(s) 1101
PspPI GGNCC 3 cut(s) 788, 1101, 1102
PspXI VCTCGAGB 1 cut(s) 149
PsuI RGATCY 1 cut(s) 666
PsyI GACNNNGTC 1 cut(s) 898
RsaI GTAC 1 cut(s) 1474
RsaNI GTAC 1 cut(s) 1473
RseI CAYNNNNRTG 2 cut(s) 297, 543
SalI GTCGAC 1 cut(s) 173
SatI GCNGC 7 cut(s) 98, 230, 404, 456, 851, 886, 1214
Sau3AI GATC 6 cut(s) 268, 330, 417, 424, 616, 666
Sau96I GGNCC 3 cut(s) 788, 1101, 1102
SchI GAGTC 1 cut(s) 854
ScrFI CCNGG 3 cut(s) 123, 188, 591
SduI GDGCHC 3 cut(s) 1030, 1105, 1191
SfaNI GCATC 5 cut(s) 99, 205, 444, 979, 1374
Sfr274I CTCGAG 1 cut(s) 149
SfuI TTCGAA 1 cut(s) 1008
SinI GGWCC 1 cut(s) 788
SlaI CTCGAG 1 cut(s) 149
SmiMI CAYNNNNRTG 2 cut(s) 297, 543
SmlI CTYRAG 2 cut(s) 149, 833
SmoI CTYRAG 2 cut(s) 149, 833
SphI GCATGC 1 cut(s) 601
Sse9I AATT 5 cut(s) 19, 25, 31, 324, 339
SspMI CTAG 2 cut(s) 155, 1428
StyD4I CCNGG 3 cut(s) 121, 186, 589
TaaI ACNGT 1 cut(s) 563
TaiI ACGT 8 cut(s) 105, 138, 279, 318, 479, 819, 876, 1100
TaqI TCGA 8 cut(s) 39, 150, 174, 423, 438, 447, 711, 1008
TasI AATT 5 cut(s) 19, 25, 31, 324, 339
TatI WGTACW 1 cut(s) 1472
TauI GCSGC 4 cut(s) 100, 406, 458, 1216
TfiI GAWTC 3 cut(s) 775, 821, 954
TscAI CASTG 4 cut(s) 369, 678, 1160, 1404
TseFI GTSAC 5 cut(s) 131, 136, 857, 1087, 1147
TseI GCWGC 3 cut(s) 229, 850, 885
Tsp45I GTSAC 5 cut(s) 131, 136, 857, 1087, 1147
TspDTI ATGAA 5 cut(s) 32, 93, 527, 767, 1250
TspGWI ACGGA 3 cut(s) 417, 932, 1405
TspRI CASTG 4 cut(s) 369, 678, 1160, 1404
Tth111I GACNNNGTC 1 cut(s) 898
VneI GTGCAC 1 cut(s) 1187
VpaK11BI GGWCC 1 cut(s) 788
XapI RAATTY 1 cut(s) 31
XceI RCATGY 1 cut(s) 601
XhoI CTCGAG 1 cut(s) 149
XmiI GTMKAC 1 cut(s) 174
XspI CTAG 2 cut(s) 155, 1428
ZraI GACGTC 1 cut(s) 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.