Rh5BG029300

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0003060
Physical Location & Seq
Reverse (-)
2078292 .. 2080399
2108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG029300.1

Sequence Viewer

Length: 1422 bp
ATGGTGATGGCGGTGGATGAAGAACACACCCAGAAGCCGCACGTGGCGATGCTATCAAGTCCGGGCGTGGGTCACGTGACCCCTCTTCTCGAGCTAGCCAAACGGCTGGTCGTCGACCTCGGCTTCCAGGTCAGCTTCCTTGCAATCACCACCGATGCACCACCCGCGCAGCTTCAGCTGCTCAACAACAACCCCACCCTCCCTTCCGATCTCCACGTCATCCACCTCCCTCATGTTGATGTGTCAAGCAACAACGTCATAGCAATTCGGATCGTTCAAATTGTCCGAGAGAGCCTTCGTTCACTGCCCTCGGTGCTAACCAACTTACACTCACATAAACCGCCGCTAAAAGCTCTGATCGTCGATCCGTTTTGCATCGAAGCCCTCGAAACCGCCGCCGACCACTCTATCCCAACATATCTTTTCTTGACCGCCTCCGCTTCATTTCTGGCGTTGACCATCTACTTCCCTACACTTCATGCAGATGTCAAGGGAGACTATGGTAAAATCAAAGAGAGTGTTTTTCTTCCAGGTTGCATGCCCTTGTGGGCTGACGATCTTCTCCCTGATGTTCTGGTACCAGAAGTCTTGCCTCTATGCAACCGGATCCCACTCGTCAAGGGCATTTTCGTAAACACATGGGAAGAAATCGAGCCGGTAACGCTGAGCGCATTTAGAAACCACCCTTTCTTTGTCAATCTGCCGACGCCGACGATTCATCCCATCGGACCCCTAACCAAAGACAAAGACGCTGACGTAGAATCGGAGCTGCTCAAGTGGCTGGACAAGCAGCCGTGTGACTCGGTTGTTTACGTGTCATTCGGCAGCGGAGGGACGCTGTCGGCGGAGCAGATGACGGAGTTGGCTCATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCAAGACCTCCCAGAGCCGATGATGCTTCGGGAAGCTTCTTCGAAGCTGGTGTTGATGGTGCCCTTACGGCGTTGTATCTGCCGGATGGGTTTTCGGAGAGGACACGAGGGTCAGGGCTGGTGACGGCGACGTGGGCTCCGCAAGTGGCGGTGTTGAGCCACCCCTCGGTGTGTGGGTTTGTGACGCACTGCGGGTGGAACTCGGTGATGGAGAGCTTGGTGCACGGGGTGGTGATGGTGGCTTGGCCGCTTTATGCAGAGCAGAAAATGAATGCGAGGGCATTGGTGGAGATGGGAGTGGCGGTGAGGCCCGAGGCGGGAGGGGATGGAGTTGTGGGAAGGGGGGAGGTGGAAAGGGTGGTGAGGATGGTGGTGGAAGGTGAAGAAGGGAAGAAGATGAGGCGGAGTGTGAGGGAGATGCAGCGGAGTGCAGTGGAGGCTTTAGGTGGCGGTGGGTCGTCTAGTGGGTGTCTAAGTCGCTTGGGGAAGGAGTGGAGGAATGGAAGTACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

473

Amino Acids

51.24

Weight (kDa)

5.66

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 240 - 407 2.6e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1015
Acc65I GGTACC 1 cut(s) 577
AccB1I GGYRCC 2 cut(s) 577, 965
AccI GTMKAC 1 cut(s) 114
AccII CGCG 1 cut(s) 167
AclWI GGATC 4 cut(s) 278, 359, 601, 614
AcoI YGGCCR 1 cut(s) 1151
AcuI CTGAAG 1 cut(s) 158
AcvI CACGTG 2 cut(s) 43, 76
AcyI GRCGYC 1 cut(s) 707
AdeI CACNNNGTG 1 cut(s) 1135
AfaI GTAC 2 cut(s) 579, 1414
AfiI CCNNNNNNNGG 4 cut(s) 68, 904, 1072, 1223
AflIII ACRYGT 1 cut(s) 813
AgsI TTSAA 1 cut(s) 278
AjiI CACGTC 2 cut(s) 217, 1038
AjnI CCWGG 2 cut(s) 126, 529
Alw21I GWGCWC 1 cut(s) 1131
Alw26I GTCTC 1 cut(s) 489
Alw44I GTGCAC 1 cut(s) 1127
AlwI GGATC 4 cut(s) 278, 359, 601, 614
Ama87I CYCGRG 2 cut(s) 89, 1217
AoxI GGCC 2 cut(s) 1151, 1214
ApaLI GTGCAC 1 cut(s) 1127
ApeKI GCWGC 6 cut(s) 169, 178, 769, 790, 825, 1327
ArsI GACNNNNNNTTYG 2 cut(s) 93, 125
Asp718I GGTACC 1 cut(s) 577
AspLEI GCGC 2 cut(s) 169, 671
AspS9I GGNCC 2 cut(s) 728, 1215
AsuC2I CCSGG 1 cut(s) 63
AsuHPI GGTGA 8 cut(s) 16, 139, 1039, 1123, 1150, 1222, 1279, 1298
AsuII TTCGAA 1 cut(s) 948
AsuNHI GCTAGC 1 cut(s) 94
AvaI CYCGRG 2 cut(s) 89, 1217
AvaII GGWCC 1 cut(s) 728
BaeGI GKGCMC 2 cut(s) 970, 1131
BamHI GGATCC 1 cut(s) 606
BanI GGYRCC 2 cut(s) 577, 965
BanII GRGCYC 1 cut(s) 1045
BauI CACGAG 1 cut(s) 1011
BbrPI CACGTG 2 cut(s) 43, 76
Bbv12I GWGCWC 1 cut(s) 1131
BbvI GCAGC 6 cut(s) 165, 181, 756, 802, 837, 1339
BccI CCATC 9 cut(s) 467, 731, 956, 986, 1108, 1135, 1192, 1226, 1267
BceAI ACGGC 4 cut(s) 119, 778, 990, 1047
BciT130I CCWGG 2 cut(s) 128, 531
BcnI CCSGG 1 cut(s) 63
BcoDI GTCTC 1 cut(s) 489
BfaI CTAG 2 cut(s) 95, 1368
BglI GCCNNNNNGGC 1 cut(s) 974
BlpI GCTNAGC 1 cut(s) 665
Bme1390I CCNGG 3 cut(s) 63, 128, 531
Bme18I GGWCC 1 cut(s) 728
BmeT110I CYCGRG 2 cut(s) 89, 1217
BmgBI CACGTC 2 cut(s) 217, 1038
BmgT120I GGNCC 2 cut(s) 728, 1215
BmiI GGNNCC 5 cut(s) 579, 608, 730, 967, 1044
BmrFI CCNGG 3 cut(s) 63, 128, 531
BmsI GCATC 5 cut(s) 39, 145, 384, 919, 1314
BmtI GCTAGC 1 cut(s) 98
Bpu1102I GCTNAGC 1 cut(s) 665
Bpu14I TTCGAA 1 cut(s) 948
BpuEI CTTGAG 1 cut(s) 758
BpuMI CCSGG 1 cut(s) 63
BsaAI YACGTR 3 cut(s) 43, 76, 814
BsaHI GRCGYC 1 cut(s) 707
BsaJI CCNNGG 4 cut(s) 118, 309, 1071, 1218
BsaWI WCCGGW 1 cut(s) 603
BsaXI ACNNNNNCTCC 4 cut(s) 1027, 1057, 1194, 1224
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 904, 1072, 1223
Bse118I RCCGGY 1 cut(s) 655
BseBI CCWGG 2 cut(s) 128, 531
BseDI CCNNGG 4 cut(s) 118, 309, 1071, 1218
BseGI GGATG 6 cut(s) 22, 219, 718, 997, 1237, 1278
BseLI CCNNNNNNNGG 4 cut(s) 68, 904, 1072, 1223
BseMII CTCAG 2 cut(s) 656, 872
BseSI GKGCMC 2 cut(s) 970, 1131
BseXI GCAGC 6 cut(s) 165, 181, 756, 802, 837, 1339
BsgI GTGCAG 1 cut(s) 1356
Bsh1236I CGCG 1 cut(s) 167
BshFI GGCC 2 cut(s) 1153, 1216
BshNI GGYRCC 2 cut(s) 577, 965
BsiHKAI GWGCWC 1 cut(s) 1131
BsiHKCI CYCGRG 2 cut(s) 89, 1217
BsiSI CCGG 4 cut(s) 62, 604, 656, 989
BslFI GGGAC 1 cut(s) 847
BslI CCNNNNNNNGG 4 cut(s) 68, 904, 1072, 1223
BsmAI GTCTC 1 cut(s) 489
BsmFI GGGAC 1 cut(s) 847
BsmI GAATGC 1 cut(s) 1183
BsnI GGCC 2 cut(s) 1153, 1216
BsoBI CYCGRG 2 cut(s) 89, 1217
Bsp119I TTCGAA 1 cut(s) 948
Bsp1286I GDGCHC 3 cut(s) 970, 1045, 1131
Bsp143I GATC 6 cut(s) 208, 270, 357, 364, 556, 606
Bsp1720I GCTNAGC 1 cut(s) 665
BspANI GGCC 2 cut(s) 1153, 1216
BspCNI CTCAG 2 cut(s) 657, 873
BspFNI CGCG 1 cut(s) 167
BspLI GGNNCC 5 cut(s) 579, 608, 730, 967, 1044
BspOI GCTAGC 1 cut(s) 98
BspPI GGATC 4 cut(s) 278, 359, 601, 614
BspT104I TTCGAA 1 cut(s) 948
BspT107I GGYRCC 2 cut(s) 577, 965
BsrFI RCCGGY 1 cut(s) 655
BssAI RCCGGY 1 cut(s) 655
BssECI CCNNGG 4 cut(s) 118, 309, 1071, 1218
BssMI GATC 6 cut(s) 208, 270, 357, 364, 556, 606
BssNI GRCGYC 1 cut(s) 707
BssSI CACGAG 1 cut(s) 1011
Bst2BI CACGAG 1 cut(s) 1011
Bst2UI CCWGG 2 cut(s) 128, 531
Bst6I CTCTTC 1 cut(s) 90
BstACI GRCGYC 1 cut(s) 707
BstBAI YACGTR 3 cut(s) 43, 76, 814
BstBI TTCGAA 1 cut(s) 948
BstC8I GCNNGC 2 cut(s) 96, 539
BstDEI CTNAG 3 cut(s) 665, 881, 1379
BstF5I GGATG 6 cut(s) 22, 219, 718, 997, 1237, 1278
BstFNI CGCG 1 cut(s) 167
BstHHI GCGC 2 cut(s) 169, 671
BstKTI GATC 6 cut(s) 211, 273, 360, 367, 559, 609
BstMAI GTCTC 1 cut(s) 489
BstMBI GATC 6 cut(s) 208, 270, 357, 364, 556, 606
BstNI CCWGG 2 cut(s) 128, 531
BstNSI RCATGY 1 cut(s) 541
BstSCI CCNGG 3 cut(s) 61, 126, 529
BstSLI GKGCMC 2 cut(s) 970, 1131
BstUI CGCG 1 cut(s) 167
BstV1I GCAGC 6 cut(s) 165, 181, 756, 802, 837, 1339
BstX2I RGATCY 1 cut(s) 606
BstXI CCANNNNNNTGG 1 cut(s) 106
BstYI RGATCY 1 cut(s) 606
BsuRI GGCC 2 cut(s) 1153, 1216
BtgZI GCGATG 1 cut(s) 62
BtrI CACGTC 2 cut(s) 217, 1038
BtsCI GGATG 6 cut(s) 22, 219, 718, 997, 1237, 1278
BtsI GCAGTG 3 cut(s) 302, 1093, 1344
BtsIMutI CAGTG 3 cut(s) 302, 1093, 1344
Cac8I GCNNGC 2 cut(s) 96, 539
CfoI GCGC 2 cut(s) 169, 671
Cfr10I RCCGGY 1 cut(s) 655
Cfr13I GGNCC 2 cut(s) 728, 1215
CseI GACGC 4 cut(s) 715, 758, 844, 1099
Csp6I GTAC 2 cut(s) 578, 1413
CviAII CATG 5 cut(s) 233, 479, 538, 639, 869
CviQI GTAC 2 cut(s) 578, 1413
DdeI CTNAG 3 cut(s) 665, 881, 1379
DpnI GATC 6 cut(s) 210, 272, 359, 366, 558, 608
DpnII GATC 6 cut(s) 208, 270, 357, 364, 556, 606
DraIII CACNNNGTG 1 cut(s) 1135
DrdI GACNNNNNNGTC 1 cut(s) 1015
DseDI GACNNNNNNGTC 1 cut(s) 1015
EaeI YGGCCR 1 cut(s) 1151
Eam1104I CTCTTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 90
EciI GGCGGA 2 cut(s) 860, 1324
Eco24I GRGCYC 1 cut(s) 1045
Eco47I GGWCC 1 cut(s) 728
Eco57I CTGAAG 1 cut(s) 158
Eco72I CACGTG 2 cut(s) 43, 76
Eco88I CYCGRG 2 cut(s) 89, 1217
EcoRII CCWGG 2 cut(s) 126, 529
EcoT38I GRGCYC 1 cut(s) 1045
FaeI CATG 5 cut(s) 236, 482, 541, 642, 872
FaqI GGGAC 1 cut(s) 847
FatI CATG 5 cut(s) 232, 478, 537, 638, 868
FauI CCCGC 3 cut(s) 172, 1091, 1216
FblI GTMKAC 1 cut(s) 114
FokI GGATG 6 cut(s) 29, 206, 705, 1004, 1244, 1285
FriOI GRGCYC 1 cut(s) 1045
FspBI CTAG 2 cut(s) 95, 1368
GlaI GCGC 2 cut(s) 168, 670
HaeIII GGCC 2 cut(s) 1153, 1216
HapII CCGG 4 cut(s) 62, 604, 656, 989
HgaI GACGC 4 cut(s) 715, 758, 844, 1099
HhaI GCGC 2 cut(s) 169, 671
Hin1I GRCGYC 1 cut(s) 707
Hin1II CATG 5 cut(s) 236, 482, 541, 642, 872
Hin6I GCGC 2 cut(s) 167, 669
HinP1I GCGC 2 cut(s) 167, 669
HincII GTYRAC 2 cut(s) 115, 456
HindII GTYRAC 2 cut(s) 115, 456
HindIII AAGCTT 1 cut(s) 940
HinfI GANTC 4 cut(s) 715, 761, 800, 894
HpaII CCGG 4 cut(s) 62, 604, 656, 989
HphI GGTGA 8 cut(s) 16, 139, 1039, 1123, 1150, 1222, 1279, 1298
Hpy166II GTNNAC 6 cut(s) 115, 302, 456, 634, 811, 1129
Hpy188I TCNGA 7 cut(s) 208, 270, 287, 357, 728, 766, 1003
Hpy188III TCNNGA 3 cut(s) 89, 427, 936
Hpy8I GTNNAC 6 cut(s) 115, 302, 456, 634, 811, 1129
Hpy99I CGWCG 5 cut(s) 116, 365, 709, 715, 1039
HpyAV CCTTC 6 cut(s) 213, 305, 1239, 1277, 1286, 1387
HpyCH4IV ACGT 7 cut(s) 42, 75, 216, 255, 756, 813, 1037
HpyF3I CTNAG 3 cut(s) 665, 881, 1379
HpySE526I ACGT 7 cut(s) 42, 75, 216, 255, 756, 813, 1037
Hsp92I GRCGYC 1 cut(s) 707
Hsp92II CATG 5 cut(s) 236, 482, 541, 642, 872
HspAI GCGC 2 cut(s) 167, 669
KpnI GGTACC 1 cut(s) 581
Kzo9I GATC 6 cut(s) 208, 270, 357, 364, 556, 606
LmnI GCTCC 4 cut(s) 766, 847, 877, 1048
Lsp1109I GCAGC 6 cut(s) 165, 181, 756, 802, 837, 1339
LweI GCATC 5 cut(s) 39, 145, 384, 919, 1314
MaeI CTAG 2 cut(s) 95, 1368
MaeII ACGT 7 cut(s) 42, 75, 216, 255, 756, 813, 1037
MaeIII GTNAC 6 cut(s) 71, 76, 658, 797, 1027, 1087
MalI GATC 6 cut(s) 210, 272, 359, 366, 558, 608
MboI GATC 6 cut(s) 208, 270, 357, 364, 556, 606
MboII GAAGA 9 cut(s) 32, 77, 518, 551, 656, 937, 1301, 1309, 1312
MflI RGATCY 1 cut(s) 606
MhlI GDGCHC 3 cut(s) 970, 1045, 1131
MluCI AATT 2 cut(s) 264, 279
MlyI GAGTC 1 cut(s) 794
MmeI TCCRAC 1 cut(s) 855
MslI CAYNNNNRTG 2 cut(s) 237, 483
MspA1I CMGCKG 3 cut(s) 178, 828, 1330
MspI CCGG 4 cut(s) 62, 604, 656, 989
MspR9I CCNGG 3 cut(s) 63, 128, 531
Mva1269I GAATGC 1 cut(s) 1183
MvaI CCWGG 2 cut(s) 128, 531
MvnI CGCG 1 cut(s) 167
NciI CCSGG 1 cut(s) 63
NdeII GATC 6 cut(s) 208, 270, 357, 364, 556, 606
NheI GCTAGC 1 cut(s) 94
NlaIII CATG 5 cut(s) 236, 482, 541, 642, 872
NlaIV GGNNCC 5 cut(s) 579, 608, 730, 967, 1044
NmeAIII GCCGAG 1 cut(s) 99
NmuCI GTSAC 5 cut(s) 71, 76, 797, 1027, 1087
NspI RCATGY 1 cut(s) 541
NspV TTCGAA 1 cut(s) 948
PaeI GCATGC 1 cut(s) 541
PaeR7I CTCGAG 1 cut(s) 89
PcsI WCGNNNNNNNCGW 1 cut(s) 384
PctI GAATGC 1 cut(s) 1183
PfeI GAWTC 3 cut(s) 715, 761, 894
PflFI GACNNNGTC 1 cut(s) 838
PleI GAGTC 1 cut(s) 794
PmaCI CACGTG 2 cut(s) 43, 76
PmlI CACGTG 2 cut(s) 43, 76
PpsI GAGTC 1 cut(s) 794
Ppu21I YACGTR 3 cut(s) 43, 76, 814
Psp6I CCWGG 2 cut(s) 126, 529
PspCI CACGTG 2 cut(s) 43, 76
PspGI CCWGG 2 cut(s) 126, 529
PspN4I GGNNCC 5 cut(s) 579, 608, 730, 967, 1044
PspPI GGNCC 2 cut(s) 728, 1215
PsuI RGATCY 1 cut(s) 606
PsyI GACNNNGTC 1 cut(s) 838
PvuII CAGCTG 1 cut(s) 178
RsaI GTAC 2 cut(s) 579, 1414
RsaNI GTAC 2 cut(s) 578, 1413
RseI CAYNNNNRTG 2 cut(s) 237, 483
SalI GTCGAC 1 cut(s) 113
Sau3AI GATC 6 cut(s) 208, 270, 357, 364, 556, 606
Sau96I GGNCC 2 cut(s) 728, 1215
SchI GAGTC 1 cut(s) 794
ScrFI CCNGG 3 cut(s) 63, 128, 531
SduI GDGCHC 3 cut(s) 970, 1045, 1131
SfaNI GCATC 5 cut(s) 39, 145, 384, 919, 1314
Sfr274I CTCGAG 1 cut(s) 89
SfuI TTCGAA 1 cut(s) 948
SinI GGWCC 1 cut(s) 728
SlaI CTCGAG 1 cut(s) 89
SmiMI CAYNNNNRTG 2 cut(s) 237, 483
SmlI CTYRAG 2 cut(s) 89, 773
SmoI CTYRAG 2 cut(s) 89, 773
SphI GCATGC 1 cut(s) 541
Sse9I AATT 2 cut(s) 264, 279
SspMI CTAG 2 cut(s) 95, 1368
StyD4I CCNGG 3 cut(s) 61, 126, 529
TaiI ACGT 7 cut(s) 45, 78, 219, 258, 759, 816, 1040
TaqI TCGA 7 cut(s) 90, 114, 363, 378, 387, 651, 948
TasI AATT 2 cut(s) 264, 279
TatI WGTACW 1 cut(s) 1412
TauI GCSGC 4 cut(s) 40, 346, 398, 1156
TfiI GAWTC 3 cut(s) 715, 761, 894
TscAI CASTG 3 cut(s) 309, 1100, 1344
TseFI GTSAC 5 cut(s) 71, 76, 797, 1027, 1087
TseI GCWGC 6 cut(s) 169, 178, 769, 790, 825, 1327
Tsp45I GTSAC 5 cut(s) 71, 76, 797, 1027, 1087
TspDTI ATGAA 5 cut(s) 33, 432, 467, 707, 1190
TspGWI ACGGA 2 cut(s) 357, 872
TspRI CASTG 3 cut(s) 309, 1100, 1344
Tth111I GACNNNGTC 1 cut(s) 838
VneI GTGCAC 1 cut(s) 1127
VpaK11BI GGWCC 1 cut(s) 728
XceI RCATGY 1 cut(s) 541
XhoI CTCGAG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 114
XspI CTAG 2 cut(s) 95, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.