Rw5G044810

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0003060
Physical Location & Seq
Forward (+)
78505892 .. 78507307
1416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G044810.1

Sequence Viewer

Length: 1416 bp
ATGGCGGTGGATGAAGAACACACCCAGAAGCCGCACGTAGCGATGCTATCAAGTCCGGGCGTGGGTCACGTGACCCCTCTCCTCGAGCTAGCCAAACGGCTGGTCGTCGACCTCGGCTTCCAGGTCAGCTTCCTTGCAATCACCACCGATGCACCACCCGCGCAGCTTCAGCTGCTCAACAACAACCCCACCCTCCCTTCCGATCTCCACGTCATCCACCTCCCTCATGTTGATGTGTCAAGCAACGACGTCATAGCAATTCGGATCGTTCAAATTGTCCGAGAGAGCCTTCGTTCACTGCCCTCGGTGCTAACCAACTTATACTCACATAAACCGCCGCTAAAAGCTCTGATCGTCGATCCGTTTTGCATCGAAGCCCTCGAAACCGCCGCCGACCACTCTATCCCAACGTATCTTTTCTTGACCGCCTCCGCTTCATTTCTGGCGTTGACCATCTACTTCCCTACGCTTCATGCAGATGTCAAGGGAGACTACGGTAAAATCAAAGAGAGTGTTTTTCTTCCAGGTTGCATGCCCTTGTGGGTTGACGATCTTCTCCCTGATGTTCTGATACCAGAAGTCTTGCCTCTGTGCAACCGGTTCCCACTGGTCAAGGGCATTTTCGTAAACACATGGGAAGAAATCGAGCCGGTAACGCTGAGCGCATTTAGAAACCACCCTTTCTTTGTCAATCTGCCGACGCCGACGATTCATCCCATCGGACCCCTAACCAAAGACAAAGACGCAGACGTAGAATCGGAGTTGCTCAAGTGGCTGGACAAGCAGCCGTGTGACTCGGTTGTTTACGTGTCATTCGGCAGCGGAGGGACGCTGTCGGCGGAGCAGATGACGGAGTTGGCTCATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTTGCAAGACCTCCCAGAGCCGATGATGCTTCGGGAAGCTTCTTCGAAGCTGGTGTTGATGGTGCCTTTACGGCGTCGTATCTACCGGATGGGTTTTCGGAGAGGACACGAGGGGCAGGGCTGGTGACGGCGACGTGGGCCCCGCAAGTGGCGGTGTTGAGCCACCCCTCGGTGTGTGGGTTTGTGACGCACTGCGGGTGGAACTCGGTGATGGAGAGCGTGGTGCACGGGGTGGTGATGGTGGCTTGGCCGCTTTATGCAGAGCAGAAGATGAATGCAAGGGCATTGGTAGAGATGGGAGTGGCGGTGAGGCCGGAGGCGGGAGGGGATGGAGTTGTGGGCAGGGGGGAGGTGGAGAGGGTGGTGAGGATGGTGGTGGAAGGCGAAGAAGGGAAGGAGATGAGGAGGAGTGTGAGGGAGATGCAACGGAGTGCAGTGGAGGCTTTGGGTGGTGGTGGGTCGTCTAGTGGGTGTCTAAGTCGCTTGGGGAAGGAGTGGAGGGATGGAAGTACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

471

Amino Acids

51.1

Weight (kDa)

5.33

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 238 - 406 2.6e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 959
AccI GTMKAC 1 cut(s) 108
AccII CGCG 1 cut(s) 161
AclWI GGATC 2 cut(s) 272, 353
AcoI YGGCCR 1 cut(s) 1145
AcuI CTGAAG 1 cut(s) 152
AcvI CACGTG 1 cut(s) 70
AcyI GRCGYC 3 cut(s) 249, 701, 971
AdeI CACNNNGTG 1 cut(s) 1129
AfaI GTAC 1 cut(s) 1408
AfiI CCNNNNNNNGG 4 cut(s) 62, 1045, 1066, 1217
AflIII ACRYGT 1 cut(s) 807
AgeI ACCGGT 1 cut(s) 597
AgsI TTSAA 1 cut(s) 272
AjiI CACGTC 2 cut(s) 211, 1032
AjnI CCWGG 2 cut(s) 120, 523
AluBI AGCT 8 cut(s) 88, 129, 166, 172, 347, 874, 936, 947
AluI AGCT 8 cut(s) 88, 129, 166, 172, 347, 874, 936, 947
Alw21I GWGCWC 1 cut(s) 1125
Alw26I GTCTC 1 cut(s) 483
Alw44I GTGCAC 1 cut(s) 1121
AlwI GGATC 2 cut(s) 272, 353
Ama87I CYCGRG 1 cut(s) 83
AoxI GGCC 3 cut(s) 1035, 1145, 1208
ApaI GGGCCC 1 cut(s) 1039
ApaLI GTGCAC 1 cut(s) 1121
ApeKI GCWGC 4 cut(s) 163, 172, 784, 819
ArsI GACNNNNNNTTYG 2 cut(s) 87, 119
AsiGI ACCGGT 1 cut(s) 597
AspLEI GCGC 2 cut(s) 163, 665
AspS9I GGNCC 3 cut(s) 722, 1035, 1036
AsuC2I CCSGG 1 cut(s) 57
AsuHPI GGTGA 6 cut(s) 133, 1033, 1117, 1144, 1216, 1273
AsuII TTCGAA 1 cut(s) 942
AsuNHI GCTAGC 1 cut(s) 88
AvaI CYCGRG 1 cut(s) 83
AvaII GGWCC 1 cut(s) 722
BaeGI GKGCMC 2 cut(s) 1039, 1125
BanI GGYRCC 1 cut(s) 959
BanII GRGCYC 1 cut(s) 1039
BauI CACGAG 1 cut(s) 1005
BbrPI CACGTG 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 1125
BbvI GCAGC 4 cut(s) 159, 175, 796, 831
BceAI ACGGC 4 cut(s) 113, 772, 984, 1041
BciT130I CCWGG 2 cut(s) 122, 525
BcnI CCSGG 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 483
BfaI CTAG 2 cut(s) 89, 1362
BglI GCCNNNNNGGC 1 cut(s) 968
BisI GCNGC 8 cut(s) 32, 164, 173, 338, 390, 785, 820, 1148
BlpI GCTNAGC 1 cut(s) 659
BlsI GCNGC 8 cut(s) 33, 165, 174, 339, 391, 786, 821, 1149
Bme1390I CCNGG 3 cut(s) 57, 122, 525
Bme18I GGWCC 1 cut(s) 722
BmeT110I CYCGRG 1 cut(s) 83
BmgBI CACGTC 2 cut(s) 211, 1032
BmgT120I GGNCC 3 cut(s) 722, 1035, 1036
BmiI GGNNCC 5 cut(s) 602, 724, 961, 1037, 1038
BmrFI CCNGG 3 cut(s) 57, 122, 525
BmsI GCATC 5 cut(s) 33, 139, 378, 913, 1308
BmtI GCTAGC 1 cut(s) 92
Bpu1102I GCTNAGC 1 cut(s) 659
Bpu14I TTCGAA 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 752
BpuMI CCSGG 1 cut(s) 57
BsaAI YACGTR 3 cut(s) 37, 70, 808
BsaHI GRCGYC 3 cut(s) 249, 701, 971
BsaJI CCNNGG 3 cut(s) 112, 303, 1065
BsaWI WCCGGW 2 cut(s) 597, 982
BsaXI ACNNNNNCTCC 2 cut(s) 1188, 1218
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 1045, 1066, 1217
Bse118I RCCGGY 2 cut(s) 597, 649
Bse1I ACTGG 1 cut(s) 612
BseBI CCWGG 2 cut(s) 122, 525
BseDI CCNNGG 3 cut(s) 112, 303, 1065
BseGI GGATG 7 cut(s) 16, 213, 712, 991, 1231, 1272, 1405
BseLI CCNNNNNNNGG 4 cut(s) 62, 1045, 1066, 1217
BseMII CTCAG 2 cut(s) 650, 866
BseNI ACTGG 1 cut(s) 612
BseRI GAGGAG 3 cut(s) 71, 1315, 1318
BseSI GKGCMC 2 cut(s) 1039, 1125
BseXI GCAGC 4 cut(s) 159, 175, 796, 831
BsgI GTGCAG 1 cut(s) 1350
Bsh1236I CGCG 1 cut(s) 161
BshFI GGCC 3 cut(s) 1037, 1147, 1210
BshNI GGYRCC 1 cut(s) 959
BshTI ACCGGT 1 cut(s) 597
BsiHKAI GWGCWC 1 cut(s) 1125
BsiHKCI CYCGRG 1 cut(s) 83
BsiSI CCGG 5 cut(s) 56, 598, 650, 983, 1211
BslFI GGGAC 1 cut(s) 841
BslI CCNNNNNNNGG 4 cut(s) 62, 1045, 1066, 1217
BsmAI GTCTC 1 cut(s) 483
BsmFI GGGAC 1 cut(s) 841
BsmI GAATGC 1 cut(s) 1177
BsnI GGCC 3 cut(s) 1037, 1147, 1210
BsoBI CYCGRG 1 cut(s) 83
Bsp119I TTCGAA 1 cut(s) 942
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 2 cut(s) 1039, 1125
Bsp143I GATC 5 cut(s) 202, 264, 351, 358, 550
Bsp1720I GCTNAGC 1 cut(s) 659
BspANI GGCC 3 cut(s) 1037, 1147, 1210
BspCNI CTCAG 2 cut(s) 651, 867
BspFNI CGCG 1 cut(s) 161
BspLI GGNNCC 5 cut(s) 602, 724, 961, 1037, 1038
BspOI GCTAGC 1 cut(s) 92
BspPI GGATC 2 cut(s) 272, 353
BspT104I TTCGAA 1 cut(s) 942
BspT107I GGYRCC 1 cut(s) 959
BsrFI RCCGGY 2 cut(s) 597, 649
BsrI ACTGG 1 cut(s) 612
BssAI RCCGGY 2 cut(s) 597, 649
BssECI CCNNGG 3 cut(s) 112, 303, 1065
BssMI GATC 5 cut(s) 202, 264, 351, 358, 550
BssNI GRCGYC 3 cut(s) 249, 701, 971
BssSI CACGAG 1 cut(s) 1005
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 2 cut(s) 122, 525
Bst4CI ACNGT 1 cut(s) 497
BstACI GRCGYC 3 cut(s) 249, 701, 971
BstBAI YACGTR 3 cut(s) 37, 70, 808
BstBI TTCGAA 1 cut(s) 942
BstC8I GCNNGC 2 cut(s) 90, 533
BstDEI CTNAG 3 cut(s) 659, 875, 1373
BstF5I GGATG 7 cut(s) 16, 213, 712, 991, 1231, 1272, 1405
BstFNI CGCG 1 cut(s) 161
BstHHI GCGC 2 cut(s) 163, 665
BstKTI GATC 5 cut(s) 205, 267, 354, 361, 553
BstMAI GTCTC 1 cut(s) 483
BstMBI GATC 5 cut(s) 202, 264, 351, 358, 550
BstNI CCWGG 2 cut(s) 122, 525
BstNSI RCATGY 1 cut(s) 535
BstSCI CCNGG 3 cut(s) 55, 120, 523
BstSLI GKGCMC 2 cut(s) 1039, 1125
BstUI CGCG 1 cut(s) 161
BstV1I GCAGC 4 cut(s) 159, 175, 796, 831
BstXI CCANNNNNNTGG 1 cut(s) 100
BsuRI GGCC 3 cut(s) 1037, 1147, 1210
BtgZI GCGATG 1 cut(s) 56
BtrI CACGTC 2 cut(s) 211, 1032
BtsCI GGATG 7 cut(s) 16, 213, 712, 991, 1231, 1272, 1405
BtsI GCAGTG 3 cut(s) 296, 1087, 1338
BtsIMutI CAGTG 4 cut(s) 296, 605, 1087, 1338
Cac8I GCNNGC 2 cut(s) 90, 533
CfoI GCGC 2 cut(s) 163, 665
Cfr10I RCCGGY 2 cut(s) 597, 649
Cfr13I GGNCC 3 cut(s) 722, 1035, 1036
CseI GACGC 5 cut(s) 709, 752, 838, 960, 1093
Csp6I GTAC 1 cut(s) 1407
CspAI ACCGGT 1 cut(s) 597
CviAII CATG 5 cut(s) 227, 473, 532, 633, 863
CviQI GTAC 1 cut(s) 1407
DdeI CTNAG 3 cut(s) 659, 875, 1373
DpnI GATC 5 cut(s) 204, 266, 353, 360, 552
DpnII GATC 5 cut(s) 202, 264, 351, 358, 550
DraIII CACNNNGTG 1 cut(s) 1129
EaeI YGGCCR 1 cut(s) 1145
EciI GGCGGA 1 cut(s) 854
Eco24I GRGCYC 1 cut(s) 1039
Eco47I GGWCC 1 cut(s) 722
Eco57I CTGAAG 1 cut(s) 152
Eco72I CACGTG 1 cut(s) 70
Eco88I CYCGRG 1 cut(s) 83
EcoO109I RGGNCCY 1 cut(s) 1036
EcoRII CCWGG 2 cut(s) 120, 523
EcoT38I GRGCYC 1 cut(s) 1039
FaeI CATG 5 cut(s) 230, 476, 535, 636, 866
FaiI YATR 9 cut(s) 228, 254, 322, 330, 474, 533, 634, 864, 1155
FaqI GGGAC 1 cut(s) 841
FatI CATG 5 cut(s) 226, 472, 531, 632, 862
FauI CCCGC 4 cut(s) 166, 1047, 1085, 1210
FblI GTMKAC 1 cut(s) 108
Fnu4HI GCNGC 8 cut(s) 32, 164, 173, 338, 390, 785, 820, 1148
FokI GGATG 7 cut(s) 23, 200, 699, 998, 1238, 1279, 1412
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 8 cut(s) 32, 164, 173, 338, 390, 785, 820, 1148
FspBI CTAG 2 cut(s) 89, 1362
GlaI GCGC 2 cut(s) 162, 664
GluI GCNGC 8 cut(s) 32, 164, 173, 338, 390, 785, 820, 1148
HaeIII GGCC 3 cut(s) 1037, 1147, 1210
HapII CCGG 5 cut(s) 56, 598, 650, 983, 1211
HgaI GACGC 5 cut(s) 709, 752, 838, 960, 1093
HhaI GCGC 2 cut(s) 163, 665
Hin1I GRCGYC 3 cut(s) 249, 701, 971
Hin1II CATG 5 cut(s) 230, 476, 535, 636, 866
Hin6I GCGC 2 cut(s) 161, 663
HinP1I GCGC 2 cut(s) 161, 663
HincII GTYRAC 3 cut(s) 109, 450, 547
HindII GTYRAC 3 cut(s) 109, 450, 547
HindIII AAGCTT 1 cut(s) 934
HinfI GANTC 4 cut(s) 709, 755, 794, 888
HpaII CCGG 5 cut(s) 56, 598, 650, 983, 1211
HphI GGTGA 6 cut(s) 133, 1033, 1117, 1144, 1216, 1273
Hpy166II GTNNAC 7 cut(s) 109, 296, 450, 547, 628, 805, 1123
Hpy188I TCNGA 8 cut(s) 202, 264, 281, 351, 570, 722, 760, 997
Hpy188III TCNNGA 2 cut(s) 421, 930
Hpy8I GTNNAC 7 cut(s) 109, 296, 450, 547, 628, 805, 1123
Hpy99I CGWCG 7 cut(s) 110, 251, 359, 703, 709, 976, 1033
HpyAV CCTTC 6 cut(s) 207, 299, 1271, 1280, 1285, 1381
HpyCH4III ACNGT 1 cut(s) 497
HpyCH4IV ACGT 8 cut(s) 36, 69, 210, 249, 410, 750, 807, 1031
HpyF3I CTNAG 3 cut(s) 659, 875, 1373
HpySE526I ACGT 8 cut(s) 36, 69, 210, 249, 410, 750, 807, 1031
Hsp92I GRCGYC 3 cut(s) 249, 701, 971
Hsp92II CATG 5 cut(s) 230, 476, 535, 636, 866
HspAI GCGC 2 cut(s) 161, 663
Kzo9I GATC 5 cut(s) 202, 264, 351, 358, 550
LmnI GCTCC 2 cut(s) 841, 871
Lsp1109I GCAGC 4 cut(s) 159, 175, 796, 831
LweI GCATC 5 cut(s) 33, 139, 378, 913, 1308
MaeI CTAG 2 cut(s) 89, 1362
MaeII ACGT 8 cut(s) 36, 69, 210, 249, 410, 750, 807, 1031
MaeIII GTNAC 6 cut(s) 65, 70, 652, 791, 1021, 1081
MalI GATC 5 cut(s) 204, 266, 353, 360, 552
MboI GATC 5 cut(s) 202, 264, 351, 358, 550
MboII GAAGA 7 cut(s) 26, 512, 545, 650, 931, 1177, 1295
MhlI GDGCHC 2 cut(s) 1039, 1125
MluCI AATT 2 cut(s) 258, 273
MlyI GAGTC 1 cut(s) 788
MmeI TCCRAC 1 cut(s) 849
MslI CAYNNNNRTG 2 cut(s) 231, 477
MspA1I CMGCKG 2 cut(s) 172, 822
MspI CCGG 5 cut(s) 56, 598, 650, 983, 1211
MspR9I CCNGG 3 cut(s) 57, 122, 525
Mva1269I GAATGC 1 cut(s) 1177
MvaI CCWGG 2 cut(s) 122, 525
MvnI CGCG 1 cut(s) 161
NciI CCSGG 1 cut(s) 57
NdeII GATC 5 cut(s) 202, 264, 351, 358, 550
NheI GCTAGC 1 cut(s) 88
NlaIII CATG 5 cut(s) 230, 476, 535, 636, 866
NlaIV GGNNCC 5 cut(s) 602, 724, 961, 1037, 1038
NmeAIII GCCGAG 1 cut(s) 93
NmuCI GTSAC 5 cut(s) 65, 70, 791, 1021, 1081
NspI RCATGY 1 cut(s) 535
NspV TTCGAA 1 cut(s) 942
PaeI GCATGC 1 cut(s) 535
PaeR7I CTCGAG 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PctI GAATGC 1 cut(s) 1177
PfeI GAWTC 3 cut(s) 709, 755, 888
PflFI GACNNNGTC 1 cut(s) 832
PinAI ACCGGT 1 cut(s) 597
PkrI GCNGC 8 cut(s) 33, 165, 174, 339, 391, 786, 821, 1149
PleI GAGTC 1 cut(s) 788
PmaCI CACGTG 1 cut(s) 70
PmlI CACGTG 1 cut(s) 70
PpsI GAGTC 1 cut(s) 788
Ppu21I YACGTR 3 cut(s) 37, 70, 808
Psp6I CCWGG 2 cut(s) 120, 523
PspCI CACGTG 1 cut(s) 70
PspGI CCWGG 2 cut(s) 120, 523
PspN4I GGNNCC 5 cut(s) 602, 724, 961, 1037, 1038
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 3 cut(s) 722, 1035, 1036
PspXI VCTCGAGB 1 cut(s) 83
PsyI GACNNNGTC 1 cut(s) 832
PvuII CAGCTG 1 cut(s) 172
RsaI GTAC 1 cut(s) 1408
RsaNI GTAC 1 cut(s) 1407
RseI CAYNNNNRTG 2 cut(s) 231, 477
SalI GTCGAC 1 cut(s) 107
SatI GCNGC 8 cut(s) 32, 164, 173, 338, 390, 785, 820, 1148
Sau3AI GATC 5 cut(s) 202, 264, 351, 358, 550
Sau96I GGNCC 3 cut(s) 722, 1035, 1036
SchI GAGTC 1 cut(s) 788
ScrFI CCNGG 3 cut(s) 57, 122, 525
SduI GDGCHC 2 cut(s) 1039, 1125
SfaNI GCATC 5 cut(s) 33, 139, 378, 913, 1308
Sfr274I CTCGAG 1 cut(s) 83
SfuI TTCGAA 1 cut(s) 942
SinI GGWCC 1 cut(s) 722
SlaI CTCGAG 1 cut(s) 83
SmiMI CAYNNNNRTG 2 cut(s) 231, 477
SmlI CTYRAG 2 cut(s) 83, 767
SmoI CTYRAG 2 cut(s) 83, 767
SphI GCATGC 1 cut(s) 535
Sse9I AATT 2 cut(s) 258, 273
SspMI CTAG 2 cut(s) 89, 1362
StyD4I CCNGG 3 cut(s) 55, 120, 523
TaaI ACNGT 1 cut(s) 497
TaiI ACGT 8 cut(s) 39, 72, 213, 252, 413, 753, 810, 1034
TaqI TCGA 7 cut(s) 84, 108, 357, 372, 381, 645, 942
TasI AATT 2 cut(s) 258, 273
TatI WGTACW 1 cut(s) 1406
TauI GCSGC 4 cut(s) 34, 340, 392, 1150
TfiI GAWTC 3 cut(s) 709, 755, 888
TscAI CASTG 4 cut(s) 303, 612, 1094, 1338
TseFI GTSAC 5 cut(s) 65, 70, 791, 1021, 1081
TseI GCWGC 4 cut(s) 163, 172, 784, 819
Tsp45I GTSAC 5 cut(s) 65, 70, 791, 1021, 1081
TspDTI ATGAA 5 cut(s) 27, 426, 461, 701, 1184
TspGWI ACGGA 3 cut(s) 351, 866, 1339
TspRI CASTG 4 cut(s) 303, 612, 1094, 1338
Tth111I GACNNNGTC 1 cut(s) 832
VneI GTGCAC 1 cut(s) 1121
VpaK11BI GGWCC 1 cut(s) 722
XceI RCATGY 1 cut(s) 535
XhoI CTCGAG 1 cut(s) 83
XmiI GTMKAC 1 cut(s) 108
XspI CTAG 2 cut(s) 89, 1362
ZraI GACGTC 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.