Zinc finger RNA-binding
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g36400 FvH4_3g36400 FvH4_3g36400 |
| malus_domestica | MD00G1013500.v1.1 MD03G1090800.v1.1 |
| prunus_persica | Prupe.6G075200_v2.0.a1 |
| pyrus_communis | pycom03g07270 pycom11g08730 |
| rosa_chinensis | RchiOBHm_Chr5g0065291 |
| rosa_laevigata | RLG00000035778 |
| rosa_multiflora | Rmu_co8470125.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015900 |
| rosa_rugosa | Rorug05G0371000 |
| rosa_samantha | Rh5AG428800 Rh5BG444100 Rh5CG466300 Rh5DG456200 Rh5DG456300 |
| rosa_wichuraiana | Rw5G040250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 132 |
| AfaI | GTAC | 2 cut(s) | 6, 184 |
| AgsI | TTSAA | 2 cut(s) | 58, 149 |
| AjnI | CCWGG | 1 cut(s) | 45 |
| AluBI | AGCT | 3 cut(s) | 281, 294, 304 |
| AluI | AGCT | 3 cut(s) | 281, 294, 304 |
| ApeKI | GCWGC | 3 cut(s) | 158, 257, 260 |
| BbsI | GAAGAC | 1 cut(s) | 120 |
| BbvI | GCAGC | 3 cut(s) | 170, 244, 247 |
| BciT130I | CCWGG | 1 cut(s) | 47 |
| BfmI | CTRYAG | 1 cut(s) | 295 |
| BisI | GCNGC | 3 cut(s) | 159, 258, 261 |
| BlsI | GCNGC | 3 cut(s) | 160, 259, 262 |
| Bme1390I | CCNGG | 1 cut(s) | 47 |
| BmrFI | CCNGG | 1 cut(s) | 47 |
| BmsI | GCATC | 1 cut(s) | 244 |
| BpiI | GAAGAC | 1 cut(s) | 120 |
| BsaJI | CCNNGG | 1 cut(s) | 46 |
| Bse1I | ACTGG | 1 cut(s) | 79 |
| BseBI | CCWGG | 1 cut(s) | 47 |
| BseDI | CCNNGG | 1 cut(s) | 46 |
| BseMII | CTCAG | 1 cut(s) | 296 |
| BseNI | ACTGG | 1 cut(s) | 79 |
| BseXI | GCAGC | 3 cut(s) | 170, 244, 247 |
| BseYI | CCCAGC | 1 cut(s) | 281 |
| BsgI | GTGCAG | 1 cut(s) | 177 |
| BslFI | GGGAC | 1 cut(s) | 298 |
| BsmFI | GGGAC | 1 cut(s) | 298 |
| BspCNI | CTCAG | 1 cut(s) | 297 |
| BsrI | ACTGG | 1 cut(s) | 79 |
| BssECI | CCNNGG | 1 cut(s) | 46 |
| Bst2UI | CCWGG | 1 cut(s) | 47 |
| Bst4CI | ACNGT | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 1 cut(s) | 302 |
| BstDEI | CTNAG | 2 cut(s) | 129, 305 |
| BstNI | CCWGG | 1 cut(s) | 47 |
| BstSCI | CCNGG | 1 cut(s) | 45 |
| BstSFI | CTRYAG | 1 cut(s) | 295 |
| BstV1I | GCAGC | 3 cut(s) | 170, 244, 247 |
| BstV2I | GAAGAC | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 1 cut(s) | 302 |
| Csp6I | GTAC | 2 cut(s) | 5, 183 |
| CviJI | RGCY | 4 cut(s) | 281, 294, 300, 304 |
| CviKI_1 | RGCY | 4 cut(s) | 281, 294, 300, 304 |
| CviQI | GTAC | 2 cut(s) | 5, 183 |
| DdeI | CTNAG | 2 cut(s) | 129, 305 |
| Eco57I | CTGAAG | 1 cut(s) | 132 |
| EcoRII | CCWGG | 1 cut(s) | 45 |
| FaiI | YATR | 6 cut(s) | 18, 168, 188, 190, 225, 249 |
| FaqI | GGGAC | 1 cut(s) | 298 |
| Fnu4HI | GCNGC | 3 cut(s) | 159, 258, 261 |
| Fsp4HI | GCNGC | 3 cut(s) | 159, 258, 261 |
| GluI | GCNGC | 3 cut(s) | 159, 258, 261 |
| GsaI | CCCAGC | 1 cut(s) | 285 |
| HpyAV | CCTTC | 2 cut(s) | 88, 143 |
| HpyCH4III | ACNGT | 1 cut(s) | 70 |
| HpyCH4IV | ACGT | 1 cut(s) | 195 |
| HpyCH4V | TGCA | 3 cut(s) | 124, 158, 263 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 305 |
| HpySE526I | ACGT | 1 cut(s) | 195 |
| LmnI | GCTCC | 1 cut(s) | 278 |
| LpnPI | CCDG | 7 cut(s) | 32, 50, 59, 60, 222, 267, 314 |
| Lsp1109I | GCAGC | 3 cut(s) | 170, 244, 247 |
| LweI | GCATC | 1 cut(s) | 244 |
| MaeII | ACGT | 1 cut(s) | 195 |
| MaeIII | GTNAC | 2 cut(s) | 70, 191 |
| MboII | GAAGA | 2 cut(s) | 103, 125 |
| MluCI | AATT | 2 cut(s) | 53, 316 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 1 cut(s) | 132 |
| MseI | TTAA | 1 cut(s) | 173 |
| MslI | CAYNNNNRTG | 1 cut(s) | 252 |
| MspA1I | CMGCKG | 1 cut(s) | 304 |
| MspR9I | CCNGG | 1 cut(s) | 47 |
| MvaI | CCWGG | 1 cut(s) | 47 |
| PkrI | GCNGC | 3 cut(s) | 160, 259, 262 |
| Psp6I | CCWGG | 1 cut(s) | 45 |
| PspFI | CCCAGC | 1 cut(s) | 281 |
| PspGI | CCWGG | 1 cut(s) | 45 |
| PvuII | CAGCTG | 1 cut(s) | 304 |
| RsaI | GTAC | 2 cut(s) | 6, 184 |
| RsaNI | GTAC | 2 cut(s) | 5, 183 |
| RseI | CAYNNNNRTG | 1 cut(s) | 252 |
| SaqAI | TTAA | 1 cut(s) | 173 |
| SatI | GCNGC | 3 cut(s) | 159, 258, 261 |
| ScrFI | CCNGG | 1 cut(s) | 47 |
| SetI | ASST | 6 cut(s) | 48, 154, 198, 283, 296, 306 |
| SfaNI | GCATC | 1 cut(s) | 244 |
| SfcI | CTRYAG | 1 cut(s) | 295 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 252 |
| Sse9I | AATT | 2 cut(s) | 53, 316 |
| StyD4I | CCNGG | 1 cut(s) | 45 |
| TaaI | ACNGT | 1 cut(s) | 70 |
| TaiI | ACGT | 1 cut(s) | 198 |
| TasI | AATT | 2 cut(s) | 53, 316 |
| TatI | WGTACW | 1 cut(s) | 182 |
| Tru1I | TTAA | 1 cut(s) | 173 |
| Tru9I | TTAA | 1 cut(s) | 173 |
| TseI | GCWGC | 3 cut(s) | 158, 257, 260 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| TspGWI | ACGGA | 1 cut(s) | 151 |