Rmu_sc0000240.1_g000035

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000240.1
OG0009476
Physical Location & Seq
Reverse (-)
186268 .. 188548
2281 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1680 bp
ctgccgggctttaaagatccgagctttttgggctttcaatttcgtcccaagatggatagtgggatggtggctgaccattctgtggaacctgcaacatgtgctcggtgccacagggctctttcacccgaaaatgaggcaattggagatcttgtaactgccaacatgtgtggggactgtaaatttttgtactttgaagatcttggtacccccacacgggactcttataggatgaggccgtctaggagaagaagagctaggtacagtagttccgagtcggttgacgatgttctctcacatttctcacatatgattaatctggtgcggcaaaatcagtcccctggctctgggcttgagcatctacctgtagatggtgattctgctgccaggatatcgcagcgcacaagttcccgtactacaccaactgggtctagaagatggaggcgggttctctctgatagtgagagtgatggtttcgataatgcagattctctctatggggagagtgaatcaaatgtcagttttgggcggtacagggtgtctcatgatgtgagtgatgtagtttcttttagtgcctatggtggtgattctgatgcttctgtagacctgcatggtttcctggatacagagacattgatccaaccagatgatggaagcgcttttgatagtgatactgacattgatccaatgcatgctggtctcaacccatggaactcagatgacgctgaagaagatgatgacgatgacgatgatgaggaggatgaagaagatgatgaatgggaagaagttgagtctgtggaaaacatggttgaatctgcagaagccaattctggtagaagaaaccgcccagtcaattggcaccaacgaagacatattactgaaactgatgctccacttcattggggaatgaggggaaggaattcccgtgatatcttatctaacttcgatgattatgttacagattctggtgattatcttgatgcagtaggctttgaagaattgctggagcatcttgctgaggcagacagcttaagacgaggagcacctcctgctgctgtctcgtttttgaataatctgcctatcattcttattggtaaggaacatgagaagcatgatgacttagcctgtgcaatttgcaaggatgtcttgactattggcactgaagtgaatcagcttccttgctttcacttgtatcacccttcctgtattctgccatggttgagtacacggaattcttgccccctttgtcgttacgagctaccaactgatgacagagactacgaagaggggaagcggaatgctggtggtagagtggagatccacgtccggcggaatgctagagaggacaggtctgctggtgtttataatagagctgaagaagatgaagatcatgcttttagtgaaactagagtggagcataggttccaagtaggtagggaacctgactctaatacctccggaggagaaaataatcgggggagttggtttctttttgccgctgctccaattgttagtcttgtgggcatagttctcgtgctttggttgggagctcccctaatggaaagaagaggtctggcaggacagggcaactttactgatcaggcccgacgccacggtcatattgctggtgcagcaccccatcacaggcagaatagaagcaggaggtggtggtctcttttctga

Protein Analysis

559

Amino Acids

62.83

Weight (kDa)

4.85

Isoelectric Point (pI)

57.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 374 - 416 9e-11 Ring finger domain
zf-C3HC4_2 PF13923 375 - 415 5.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 375 - 416 5.3e-06 RING-H2 zinc finger domain
zf-C3HC4 PF00097 375 - 415 6.4e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1362
AasI GACNNNNNNGTC 1 cut(s) 1611
Acc36I ACCTGC 2 cut(s) 97, 612
Acc65I GGTACC 1 cut(s) 203
AccB1I GGYRCC 3 cut(s) 105, 203, 855
AccB7I CCANNNNNTGG 2 cut(s) 82, 647
AccI GTMKAC 1 cut(s) 600
AccIII TCCGGA 1 cut(s) 1454
AciI CCGC 7 cut(s) 322, 442, 526, 841, 1291, 1327, 1494
AclWI GGATC 4 cut(s) 11, 628, 674, 1309
AcsI RAATTY 3 cut(s) 179, 916, 1228
AcuI CTGAAG 3 cut(s) 744, 1179, 1392
AcyI GRCGYC 1 cut(s) 1606
AfaI GTAC 6 cut(s) 188, 205, 260, 412, 530, 1222
AfeI AGCGCT 1 cut(s) 655
AfiI CCNNNNNNNGG 7 cut(s) 82, 213, 214, 344, 368, 647, 1641
AflII CTTAAG 1 cut(s) 1027
AflIII ACRYGT 2 cut(s) 95, 162
AgsI TTSAA 5 cut(s) 38, 194, 809, 992, 1066
AjiI CACGTC 1 cut(s) 1321
AjnI CCWGG 3 cut(s) 337, 383, 615
AleI CACNNNNGTG 1 cut(s) 1160
AloI GAACNNNNNNTCC 2 cut(s) 1403, 1435
AluBI AGCT 7 cut(s) 24, 254, 1026, 1171, 1255, 1370, 1547
AluI AGCT 7 cut(s) 24, 254, 1026, 1171, 1255, 1370, 1547
Alw21I GWGCWC 3 cut(s) 103, 1042, 1549
Alw26I GTCTC 6 cut(s) 543, 620, 701, 1060, 1266, 1674
AlwI GGATC 4 cut(s) 11, 628, 674, 1309
AlwNI CAGNNNCTG 1 cut(s) 962
Aor13HI TCCGGA 1 cut(s) 1454
Aor51HI AGCGCT 1 cut(s) 655
AoxI GGCC 2 cut(s) 233, 1599
ApeKI GCWGC 5 cut(s) 380, 394, 1049, 1496, 1628
ApoI RAATTY 3 cut(s) 179, 916, 1228
AseI ATTAAT 1 cut(s) 312
Asp700I GAANNNNTTC 1 cut(s) 916
Asp718I GGTACC 1 cut(s) 203
AspLEI GCGC 2 cut(s) 399, 656
AspS9I GGNCC 1 cut(s) 1600
AsuC2I CCSGG 1 cut(s) 6
AsuHPI GGTGA 5 cut(s) 114, 383, 593, 977, 1184
BaeI ACNNNNGTAYC 2 cut(s) 250, 283
BanI GGYRCC 3 cut(s) 105, 203, 855
BanII GRGCYC 2 cut(s) 118, 1549
BarI GAAGNNNNNNTAC 2 cut(s) 856, 888
BauI CACGAG 1 cut(s) 1529
BbsI GAAGAC 1 cut(s) 871
Bbv12I GWGCWC 3 cut(s) 103, 1042, 1549
BbvCI CCTCAGC 1 cut(s) 1014
BbvI GCAGC 5 cut(s) 367, 406, 1036, 1483, 1640
BccI CCATC 7 cut(s) 46, 58, 362, 429, 461, 641, 1644
BceAI ACGGC 1 cut(s) 220
BcgI CGANNNNNNTGC 2 cut(s) 1510, 1544
BciT130I CCWGG 3 cut(s) 339, 385, 617
BciVI GTATCC 1 cut(s) 613
BclI TGATCA 1 cut(s) 1594
BcnI CCSGG 1 cut(s) 6
BcoDI GTCTC 6 cut(s) 543, 620, 701, 1060, 1266, 1674
BfaI CTAG 5 cut(s) 240, 255, 429, 1335, 1404
BfmI CTRYAG 3 cut(s) 363, 597, 813
BfoI RGCGCY 1 cut(s) 657
BfrI CTTAAG 1 cut(s) 1027
BfuAI ACCTGC 2 cut(s) 97, 612
BfuI GTATCC 1 cut(s) 613
BglII AGATCT 2 cut(s) 145, 196
BisI GCNGC 7 cut(s) 323, 381, 395, 1050, 1494, 1497, 1629
BlsI GCNGC 7 cut(s) 324, 382, 396, 1051, 1495, 1498, 1630
Bme1390I CCNGG 4 cut(s) 6, 339, 385, 617
BmgBI CACGTC 1 cut(s) 1321
BmgT120I GGNCC 1 cut(s) 1600
BmiI GGNNCC 6 cut(s) 87, 107, 205, 857, 1421, 1437
BmrFI CCNGG 4 cut(s) 6, 339, 385, 617
BmrI ACTGGG 2 cut(s) 432, 839
BmsI GCATC 5 cut(s) 364, 580, 874, 967, 1015
BmuI ACTGGG 2 cut(s) 432, 839
BpiI GAAGAC 1 cut(s) 871
BpmI CTGGAG 1 cut(s) 1022
Bpu10I CCTNAGC 1 cut(s) 1014
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 1 cut(s) 6
BsaBI GATNNNNATC 1 cut(s) 1383
BsaHI GRCGYC 1 cut(s) 1606
BsaI GGTCTC 2 cut(s) 701, 1674
BsaJI CCNNGG 4 cut(s) 337, 704, 1211, 1609
BsaWI WCCGGW 1 cut(s) 1454
BsaXI ACNNNNNCTCC 6 cut(s) 135, 165, 871, 901, 1403, 1433
Bsc4I CCNNNNNNNGG 7 cut(s) 82, 213, 214, 344, 368, 647, 1641
Bse1I ACTGG 2 cut(s) 427, 845
Bse8I GATNNNNATC 1 cut(s) 1383
BseAI TCCGGA 1 cut(s) 1454
BseBI CCWGG 3 cut(s) 339, 385, 617
BseDI CCNNGG 4 cut(s) 337, 704, 1211, 1609
BseGI GGATG 4 cut(s) 69, 234, 763, 1144
BseJI GATNNNNATC 1 cut(s) 1383
BseLI CCNNNNNNNGG 7 cut(s) 82, 213, 214, 344, 368, 647, 1641
BseMII CTCAG 2 cut(s) 726, 1005
BseNI ACTGG 2 cut(s) 427, 845
BseRI GAGGAG 3 cut(s) 767, 1050, 1473
BseXI GCAGC 5 cut(s) 367, 406, 1036, 1483, 1640
BsgI GTGCAG 1 cut(s) 1647
BshFI GGCC 2 cut(s) 235, 1601
BshNI GGYRCC 3 cut(s) 105, 203, 855
BsiHKAI GWGCWC 3 cut(s) 103, 1042, 1549
BsiSI CCGG 3 cut(s) 5, 1324, 1455
BslFI GGGAC 4 cut(s) 30, 185, 230, 319
BslI CCNNNNNNNGG 7 cut(s) 82, 213, 214, 344, 368, 647, 1641
BsmAI GTCTC 6 cut(s) 543, 620, 701, 1060, 1266, 1674
BsmFI GGGAC 4 cut(s) 30, 185, 230, 319
BsmI GAATGC 2 cut(s) 1300, 1336
BsnI GGCC 2 cut(s) 235, 1601
Bso31I GGTCTC 2 cut(s) 701, 1674
Bsp1286I GDGCHC 4 cut(s) 103, 118, 1042, 1549
Bsp13I TCCGGA 1 cut(s) 1454
Bsp143I GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
Bsp19I CCATGG 2 cut(s) 704, 1211
BspACI CCGC 7 cut(s) 322, 442, 526, 841, 1291, 1327, 1494
BspANI GGCC 2 cut(s) 235, 1601
BspCNI CTCAG 2 cut(s) 725, 1006
BspEI TCCGGA 1 cut(s) 1454
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 6 cut(s) 87, 107, 205, 857, 1421, 1437
BspMAI CTGCAG 1 cut(s) 817
BspMI ACCTGC 2 cut(s) 97, 612
BspPI GGATC 4 cut(s) 11, 628, 674, 1309
BspQI GCTCTTC 1 cut(s) 244
BspT107I GGYRCC 3 cut(s) 105, 203, 855
BspTI CTTAAG 1 cut(s) 1027
BspTNI GGTCTC 2 cut(s) 701, 1674
BsrI ACTGG 2 cut(s) 427, 845
BssECI CCNNGG 4 cut(s) 337, 704, 1211, 1609
BssMI GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
BssNI GRCGYC 1 cut(s) 1606
BssSI CACGAG 1 cut(s) 1529
BssT1I CCWWGG 2 cut(s) 704, 1211
Bst2BI CACGAG 1 cut(s) 1529
Bst2UI CCWGG 3 cut(s) 339, 385, 617
Bst4CI ACNGT 3 cut(s) 176, 263, 1613
Bst6I CTCTTC 3 cut(s) 244, 1275, 1558
BstACI GRCGYC 1 cut(s) 1606
BstAFI CTTAAG 1 cut(s) 1027
BstAPI GCANNNNNTGC 2 cut(s) 98, 1046
BstC8I GCNNGC 1 cut(s) 690
BstDEI CTNAG 3 cut(s) 712, 1014, 1117
BstDSI CCRYGG 3 cut(s) 704, 1211, 1609
BstF5I GGATG 4 cut(s) 69, 234, 763, 1144
BstH2I RGCGCY 1 cut(s) 657
BstHHI GCGC 2 cut(s) 399, 656
BstKTI GATC 8 cut(s) 19, 148, 199, 636, 682, 1317, 1387, 1597
BstMAI GTCTC 6 cut(s) 543, 620, 701, 1060, 1266, 1674
BstMBI GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
BstMWI GCNNNNNNNGC 4 cut(s) 30, 98, 1046, 1628
BstNI CCWGG 3 cut(s) 339, 385, 617
BstNSI RCATGY 3 cut(s) 99, 166, 692
BstSCI CCNGG 4 cut(s) 4, 337, 383, 615
BstSFI CTRYAG 3 cut(s) 363, 597, 813
BstV1I GCAGC 5 cut(s) 367, 406, 1036, 1483, 1640
BstV2I GAAGAC 1 cut(s) 871
BstX2I RGATCY 4 cut(s) 16, 145, 196, 1314
BstXI CCANNNNNNTGG 2 cut(s) 852, 897
BstYI RGATCY 4 cut(s) 16, 145, 196, 1314
BsuI GTATCC 1 cut(s) 613
BsuRI GGCC 2 cut(s) 235, 1601
BtgI CCRYGG 3 cut(s) 704, 1211, 1609
BtrI CACGTC 1 cut(s) 1321
BtsCI GGATG 4 cut(s) 69, 234, 763, 1144
BtsIMutI CAGTG 1 cut(s) 1155
BveI ACCTGC 2 cut(s) 97, 612
Cac8I GCNNGC 1 cut(s) 690
CaiI CAGNNNCTG 1 cut(s) 962
CciI TCATGA 1 cut(s) 541
CfoI GCGC 2 cut(s) 399, 656
Cfr13I GGNCC 1 cut(s) 1600
CseI GACGC 2 cut(s) 728, 1614
Csp6I GTAC 6 cut(s) 187, 204, 259, 411, 529, 1221
CspCI CAANNNNNGTGG 2 cut(s) 148, 183
CviQI GTAC 6 cut(s) 187, 204, 259, 411, 529, 1221
DdeI CTNAG 3 cut(s) 712, 1014, 1117
DpnI GATC 8 cut(s) 18, 147, 198, 635, 681, 1316, 1386, 1596
DpnII GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
DraI TTTAAA 1 cut(s) 13
DrdI GACNNNNNNGTC 1 cut(s) 1611
DseDI GACNNNNNNGTC 1 cut(s) 1611
Eam1104I CTCTTC 3 cut(s) 244, 1275, 1558
EarI CTCTTC 3 cut(s) 244, 1275, 1558
EciI GGCGGA 1 cut(s) 1342
Ecl136II GAGCTC 1 cut(s) 1547
Eco130I CCWWGG 2 cut(s) 704, 1211
Eco24I GRGCYC 2 cut(s) 118, 1549
Eco31I GGTCTC 2 cut(s) 701, 1674
Eco32I GATATC 2 cut(s) 390, 928
Eco47III AGCGCT 1 cut(s) 655
Eco53kI GAGCTC 1 cut(s) 1547
Eco57I CTGAAG 3 cut(s) 744, 1179, 1392
EcoICRI GAGCTC 1 cut(s) 1547
EcoRI GAATTC 2 cut(s) 916, 1228
EcoRII CCWGG 3 cut(s) 337, 383, 615
EcoRV GATATC 2 cut(s) 390, 928
EcoT14I CCWWGG 2 cut(s) 704, 1211
EcoT22I ATGCAT 1 cut(s) 690
EcoT38I GRGCYC 2 cut(s) 118, 1549
ErhI CCWWGG 2 cut(s) 704, 1211
FalI AAGNNNNNCTT 2 cut(s) 1127, 1159
FaqI GGGAC 4 cut(s) 30, 185, 230, 319
FauI CCCGC 1 cut(s) 435
FauNDI CATATG 1 cut(s) 306
FbaI TGATCA 1 cut(s) 1594
FblI GTMKAC 1 cut(s) 600
Fnu4HI GCNGC 7 cut(s) 323, 381, 395, 1050, 1494, 1497, 1629
FokI GGATG 4 cut(s) 76, 241, 770, 1151
FriOI GRGCYC 2 cut(s) 118, 1549
Fsp4HI GCNGC 7 cut(s) 323, 381, 395, 1050, 1494, 1497, 1629
FspBI CTAG 5 cut(s) 240, 255, 429, 1335, 1404
GlaI GCGC 2 cut(s) 398, 655
GluI GCNGC 7 cut(s) 323, 381, 395, 1050, 1494, 1497, 1629
GsuI CTGGAG 1 cut(s) 1022
HaeII RGCGCY 1 cut(s) 657
HaeIII GGCC 2 cut(s) 235, 1601
HapII CCGG 3 cut(s) 5, 1324, 1455
HgaI GACGC 2 cut(s) 728, 1614
HhaI GCGC 2 cut(s) 399, 656
Hin1I GRCGYC 1 cut(s) 1606
Hin6I GCGC 2 cut(s) 397, 654
HinP1I GCGC 2 cut(s) 397, 654
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HpaII CCGG 3 cut(s) 5, 1324, 1455
HphI GGTGA 5 cut(s) 114, 383, 593, 977, 1184
Hpy166II GTNNAC 3 cut(s) 280, 601, 1223
Hpy188I TCNGA 6 cut(s) 21, 271, 454, 589, 715, 1679
Hpy188III TCNNGA 5 cut(s) 429, 542, 974, 1144, 1455
Hpy8I GTNNAC 3 cut(s) 280, 601, 1223
Hpy99I CGWCG 1 cut(s) 1608
HpyAV CCTTC 2 cut(s) 906, 1206
HpyCH4III ACNGT 3 cut(s) 176, 263, 1613
HpyCH4IV ACGT 1 cut(s) 1320
HpyCH4V TGCA 9 cut(s) 92, 482, 607, 688, 815, 980, 1127, 1134, 1628
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 98, 1046, 1628
HpyF3I CTNAG 3 cut(s) 712, 1014, 1117
HpySE526I ACGT 1 cut(s) 1320
Hsp92I GRCGYC 1 cut(s) 1606
HspAI GCGC 2 cut(s) 397, 654
Kpn2I TCCGGA 1 cut(s) 1454
KpnI GGTACC 1 cut(s) 207
Ksp22I TGATCA 1 cut(s) 1594
Kzo9I GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
LguI GCTCTTC 1 cut(s) 244
LmnI GCTCC 7 cut(s) 892, 1003, 1037, 1411, 1504, 1544, 1552
Lsp1109I GCAGC 5 cut(s) 367, 406, 1036, 1483, 1640
LweI GCATC 5 cut(s) 364, 580, 874, 967, 1015
MaeI CTAG 5 cut(s) 240, 255, 429, 1335, 1404
MaeII ACGT 1 cut(s) 1320
MaeIII GTNAC 3 cut(s) 151, 952, 1247
MalI GATC 8 cut(s) 18, 147, 198, 635, 681, 1316, 1386, 1596
MboI GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
MfeI CAATTG 3 cut(s) 138, 850, 1503
MflI RGATCY 4 cut(s) 16, 145, 196, 1314
MhlI GDGCHC 4 cut(s) 103, 118, 1042, 1549
MlyI GAGTC 4 cut(s) 212, 281, 797, 1436
MmeI TCCRAC 1 cut(s) 661
Mph1103I ATGCAT 1 cut(s) 690
MroI TCCGGA 1 cut(s) 1454
MroXI GAANNNNTTC 1 cut(s) 916
MseI TTAA 3 cut(s) 12, 312, 1028
MslI CAYNNNNRTG 1 cut(s) 1160
MspA1I CMGCKG 1 cut(s) 1496
MspCI CTTAAG 1 cut(s) 1027
MspI CCGG 3 cut(s) 5, 1324, 1455
MspR9I CCNGG 4 cut(s) 6, 339, 385, 617
MunI CAATTG 3 cut(s) 138, 850, 1503
Mva1269I GAATGC 2 cut(s) 1300, 1336
MvaI CCWGG 3 cut(s) 339, 385, 617
MwoI GCNNNNNNNGC 4 cut(s) 30, 98, 1046, 1628
NciI CCSGG 1 cut(s) 6
NcoI CCATGG 2 cut(s) 704, 1211
NdeI CATATG 1 cut(s) 306
NdeII GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
NlaIV GGNNCC 6 cut(s) 87, 107, 205, 857, 1421, 1437
NsiI ATGCAT 1 cut(s) 690
NspI RCATGY 3 cut(s) 99, 166, 692
OliI CACNNNNGTG 1 cut(s) 1160
PaeI GCATGC 1 cut(s) 692
PagI TCATGA 1 cut(s) 541
PciI ACATGT 2 cut(s) 95, 162
PciSI GCTCTTC 1 cut(s) 244
PctI GAATGC 2 cut(s) 1300, 1336
PdmI GAANNNNTTC 1 cut(s) 916
PfeI GAWTC 7 cut(s) 374, 485, 506, 584, 809, 959, 1165
PflMI CCANNNNNTGG 2 cut(s) 82, 647
PfoI TCCNGGA 1 cut(s) 615
PkrI GCNGC 7 cut(s) 324, 382, 396, 1051, 1495, 1498, 1630
PleI GAGTC 4 cut(s) 212, 280, 796, 1436
PpsI GAGTC 4 cut(s) 212, 280, 796, 1436
PscI ACATGT 2 cut(s) 95, 162
PshBI ATTAAT 1 cut(s) 312
PsiI TTATAA 1 cut(s) 1362
Psp124BI GAGCTC 1 cut(s) 1549
Psp6I CCWGG 3 cut(s) 337, 383, 615
PspGI CCWGG 3 cut(s) 337, 383, 615
PspN4I GGNNCC 6 cut(s) 87, 107, 205, 857, 1421, 1437
PspPI GGNCC 1 cut(s) 1600
PstI CTGCAG 1 cut(s) 817
PstNI CAGNNNCTG 1 cut(s) 962
PsuI RGATCY 4 cut(s) 16, 145, 196, 1314
RsaI GTAC 6 cut(s) 188, 205, 260, 412, 530, 1222
RsaNI GTAC 6 cut(s) 187, 204, 259, 411, 529, 1221
RseI CAYNNNNRTG 1 cut(s) 1160
SacI GAGCTC 1 cut(s) 1549
SapI GCTCTTC 1 cut(s) 244
SaqAI TTAA 3 cut(s) 12, 312, 1028
SatI GCNGC 7 cut(s) 323, 381, 395, 1050, 1494, 1497, 1629
Sau3AI GATC 8 cut(s) 16, 145, 196, 633, 679, 1314, 1384, 1594
Sau96I GGNCC 1 cut(s) 1600
SchI GAGTC 4 cut(s) 212, 281, 797, 1436
ScrFI CCNGG 4 cut(s) 6, 339, 385, 617
SduI GDGCHC 4 cut(s) 103, 118, 1042, 1549
SfaNI GCATC 5 cut(s) 364, 580, 874, 967, 1015
SfcI CTRYAG 3 cut(s) 363, 597, 813
SmiMI CAYNNNNRTG 1 cut(s) 1160
SmlI CTYRAG 2 cut(s) 350, 1027
SmoI CTYRAG 2 cut(s) 350, 1027
SphI GCATGC 1 cut(s) 692
SsiI CCGC 7 cut(s) 322, 442, 526, 841, 1291, 1327, 1494
SspMI CTAG 5 cut(s) 240, 255, 429, 1335, 1404
SstI GAGCTC 1 cut(s) 1549
StyD4I CCNGG 4 cut(s) 4, 337, 383, 615
StyI CCWWGG 2 cut(s) 704, 1211
TaaI ACNGT 3 cut(s) 176, 263, 1613
TaiI ACGT 1 cut(s) 1323
TaqI TCGA 2 cut(s) 474, 942
TatI WGTACW 2 cut(s) 186, 1220
TauI GCSGC 2 cut(s) 325, 1496
TfiI GAWTC 7 cut(s) 374, 485, 506, 584, 809, 959, 1165
Tru1I TTAA 3 cut(s) 12, 312, 1028
Tru9I TTAA 3 cut(s) 12, 312, 1028
TscAI CASTG 1 cut(s) 1162
TseI GCWGC 5 cut(s) 380, 394, 1049, 1496, 1628
TspDTI ATGAA 4 cut(s) 774, 786, 884, 1395
TspGWI ACGGA 1 cut(s) 1240
TspRI CASTG 1 cut(s) 1162
Van91I CCANNNNNTGG 2 cut(s) 82, 647
Vha464I CTTAAG 1 cut(s) 1027
VspI ATTAAT 1 cut(s) 312
XapI RAATTY 3 cut(s) 179, 916, 1228
XbaI TCTAGA 1 cut(s) 428
XceI RCATGY 3 cut(s) 99, 166, 692
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XmiI GTMKAC 1 cut(s) 600
XmnI GAANNNNTTC 1 cut(s) 916
XspI CTAG 5 cut(s) 240, 255, 429, 1335, 1404
Zsp2I ATGCAT 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.