Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0009476

Physical Location & Seq

Genomic Coordinates Forward (+)

41350327 .. 41353110

Gene Structure 2784 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00420010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGATAGTGCGATGGTAGCTGACCATTCTGTGGAACCTGCAACATGTGCTCGGTGCCACAGGGCTCTTTCACCCGAAAATGAGGCAATTGGAGATCTTGTAACTGCCAACATGTGTGGGGACTGTAAATTTTGGTACCTTCAAGATCTTGGTAGTCCCGTGTTCCCCACACGGGACTCTTATAGGATGAGGCCGTCTAGGAGAAGAAGAGCTAGGTACAGTAGTTCCGAGTCGGTTGACGATATTTTCTCACAACAGTTATCACATGTGATTAATCTGGTGCGGCAAAATCAGTCCCCTGGCTCTGGGCTTGAGGATCTACCTGTAGATGGTGATTCTGCTGCCAGGATATCACAGCGCACAAGTTCCCGTACTACACCAACTGGGTCTAGAAGATGGAGGCGGGTTCTCTCTGATACTGAGAGTGATGGTTTCGATAATGCAGATTCTCTCTATGGGGAGAGTGAATCAAATGTCAGTTTTGGGCGGTACAGGGTGTCTCATGATGTGAGTGATGTAGTTTCTTTTAGTGCCTATGGTGGTGATTCTGATGCTTCTGTAGACCTGCATGGTTTCCTGGATACAGAGACATTTATCCAACCAGATGATGGAAGCGCTTTTGATAGTGATACTGACATTGATCCAATGCATGCTGGTCTCAACCCATGGAACTCAGATGACGCTGAAGAAGATGATGACGATGACGATGATGAGGAGGATGAAGAAGATGATGAATGGGAAGAAGTTGAGTCTGTGGAAAACATGGTTGAATCTGCAGAAGCCAATAGTCAACCGCGAAACCCTTTGATTTTGAGTTCTGGTAGAAGAAACCGCCCAGTCAATTGGCACCAACGAAGACAGATTACTGAAACTGATGCTCCACTTCATTGGGGAATGAGGGGAAGGAATTCCCGTGATATCTTATCTAACTTTGATGATTCAGACATGATGCCTTATGTTACAACTTCTGGTGATTATCTTGATGTAGGCTTTGAAGAATTGCTGGAGCATCTTGCTGAGGCAGACAGCTCAAGACGAGGAGCACCTCCTGCTGCTGTCTCGTTTTTGAATAATCTGCCTCTCATTCCTATTGGTAAGGAACATGAGAAGCATGATGACTTAGCCTGTGCAATTTGCAAGGATGTATTGACTATTGGCACTGAAGTGAATCAGCTTCCTTGCTTTCACTTGTATCACCCTTCCTGTATTCTGCCATGGTTGAGTACACGGAATTCTTGCCCCCTTTGTCGTTATGAGCTACCAACTGATGACAGAGACTACGAAGAGGGGAAGCGGAATGCTGGTGGTAGAGTGGAGATCCACGTCCGGCGGAATGCTAGAGAGGACAGGTCTGCTGGTGTTTATAATAGAGCTGAAGAAGATGAAGATCATGCTTTTAGTGAAACTAGAGTGGAGCATAGGTTCCAAGTAGGTAGGGAACCTGACTCTAATACCTCCAGAGGAGAAAATAATCGGGGGAGTTGGTTTCTTCTTGCCGCTGCTCCAATTGTTAGTCTTGTGGGCATAGTTCTCGTGCTGTGGTTGGGAACTCCCCTAATGGAAAGAAGAGGTCTGGCAGGACAGGGAAACTTTGCTGATCAGGCCCGACGCCACGGTCACATTGCTGGTGCAGCACCCCACCACAGGCAGAATAGAAGCAGGAGGTGGTGGTCTCTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2 zf-RING_2

Protein Analysis

560

Amino Acids

62.97

Weight (kDa)

4.77

Isoelectric Point (pI)

59.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	375 - 417	9e-11	Ring finger domain
zf-C3HC4_2	PF13923	376 - 416	5.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	376 - 417	5.3e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	376 - 416	6.4e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01980
fragaria_vesca	FvH4_6g09350 FvH4_6g09350 FvH4_6g09350
malus_domestica	MD04G1178400.v1.1 MD12G1193900.v1.1
prunus_persica	Prupe.6G298400_v2.0.a1
pyrus_communis	pycom04g15740 pycom12g18010
rosa_chinensis	RchiOBHm_Chr2g0091181 RchiOBHm_Chr3g0459741
rosa_laevigata	RLG00000016189 RLG00000025061
rosa_multiflora	Rmu_sc0000240.1_g000035
rosa_roxburghii	Rroxscaffold_2G00150420 Rroxscaffold_6G00420010
rosa_rugosa	Rorug02G0014100 Rorug03G0038100
rosa_samantha	Rh3AG096500 Rh3BG099200 Rh3CG101100 Rh3DG100500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1365
AasI	GACNNNNNNGTC	1 cut(s)	1614
Acc36I	ACCTGC	2 cut(s)	46, 573
Acc65I	GGTACC	1 cut(s)	135
AccB1I	GGYRCC	3 cut(s)	54, 135, 846
AccB7I	CCANNNNNTGG	2 cut(s)	31, 608
AccI	GTMKAC	1 cut(s)	561
AccII	CGCG	1 cut(s)	796
AciI	CCGC	8 cut(s)	283, 403, 487, 794, 832, 1294, 1330, 1497
AclWI	GGATC	3 cut(s)	324, 635, 1312
AcsI	RAATTY	3 cut(s)	128, 907, 1231
AcuI	CTGAAG	3 cut(s)	705, 1182, 1395
AcyI	GRCGYC	1 cut(s)	1609
AfaI	GTAC	5 cut(s)	137, 218, 373, 491, 1225
AfeI	AGCGCT	1 cut(s)	616
AfiI	CCNNNNNNNGG	6 cut(s)	31, 172, 305, 329, 608, 1644
AflIII	ACRYGT	3 cut(s)	44, 111, 265
AgsI	TTSAA	4 cut(s)	143, 770, 995, 1069
AjiI	CACGTC	1 cut(s)	1324
AjnI	CCWGG	3 cut(s)	298, 344, 576
AleI	CACNNNNGTG	1 cut(s)	1163
AloI	GAACNNNNNNTCC	2 cut(s)	1406, 1438
AluBI	AGCT	6 cut(s)	20, 212, 1029, 1174, 1258, 1373
AluI	AGCT	6 cut(s)	20, 212, 1029, 1174, 1258, 1373
Alw21I	GWGCWC	2 cut(s)	52, 1045
Alw26I	GTCTC	6 cut(s)	504, 581, 662, 1063, 1269, 1677
AlwI	GGATC	3 cut(s)	324, 635, 1312
Aor51HI	AGCGCT	1 cut(s)	616
AoxI	GGCC	2 cut(s)	191, 1602
ApeKI	GCWGC	4 cut(s)	341, 1052, 1499, 1631
ApoI	RAATTY	3 cut(s)	128, 907, 1231
AseI	ATTAAT	1 cut(s)	273
Asp700I	GAANNNNTTC	1 cut(s)	907
Asp718I	GGTACC	1 cut(s)	135
AspLEI	GCGC	2 cut(s)	360, 617
AspS9I	GGNCC	1 cut(s)	1603
AsuHPI	GGTGA	5 cut(s)	63, 344, 554, 983, 1187
BaeI	ACNNNNGTAYC	2 cut(s)	208, 241
BanI	GGYRCC	3 cut(s)	54, 135, 846
BanII	GRGCYC	1 cut(s)	67
BarI	GAAGNNNNNNTAC	2 cut(s)	847, 879
BauI	CACGAG	1 cut(s)	1532
BbsI	GAAGAC	1 cut(s)	862
Bbv12I	GWGCWC	2 cut(s)	52, 1045
BbvCI	CCTCAGC	1 cut(s)	1017
BbvI	GCAGC	4 cut(s)	328, 1039, 1486, 1643
BccI	CCATC	5 cut(s)	7, 323, 390, 422, 602
BceAI	ACGGC	1 cut(s)	178
BcgI	CGANNNNNNTGC	2 cut(s)	1513, 1547
BciT130I	CCWGG	3 cut(s)	300, 346, 578
BciVI	GTATCC	1 cut(s)	574
BclI	TGATCA	1 cut(s)	1597
BcoDI	GTCTC	6 cut(s)	504, 581, 662, 1063, 1269, 1677
BfaI	CTAG	5 cut(s)	198, 213, 390, 1338, 1407
BfmI	CTRYAG	3 cut(s)	324, 558, 774
BfoI	RGCGCY	1 cut(s)	618
BfuAI	ACCTGC	2 cut(s)	46, 573
BfuI	GTATCC	1 cut(s)	574
BglII	AGATCT	2 cut(s)	94, 145
BisI	GCNGC	6 cut(s)	284, 342, 1053, 1497, 1500, 1632
BlsI	GCNGC	6 cut(s)	285, 343, 1054, 1498, 1501, 1633
Bme1390I	CCNGG	3 cut(s)	300, 346, 578
BmgBI	CACGTC	1 cut(s)	1324
BmgT120I	GGNCC	1 cut(s)	1603
BmiI	GGNNCC	6 cut(s)	36, 56, 137, 848, 1424, 1440
BmrFI	CCNGG	3 cut(s)	300, 346, 578
BmrI	ACTGGG	2 cut(s)	393, 830
BmsI	GCATC	4 cut(s)	541, 865, 939, 1018
BmuI	ACTGGG	2 cut(s)	393, 830
BpiI	GAAGAC	1 cut(s)	862
BpmI	CTGGAG	2 cut(s)	1025, 1441
Bpu10I	CCTNAGC	1 cut(s)	1017
BpuEI	CTTGAG	2 cut(s)	332, 1015
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaHI	GRCGYC	1 cut(s)	1609
BsaI	GGTCTC	2 cut(s)	662, 1677
BsaJI	CCNNGG	4 cut(s)	298, 665, 1214, 1612
BsaXI	ACNNNNNCTCC	6 cut(s)	84, 114, 862, 892, 1406, 1436
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 172, 305, 329, 608, 1644
Bse1I	ACTGG	2 cut(s)	388, 836
Bse3DI	GCAATG	1 cut(s)	1620
Bse8I	GATNNNNATC	1 cut(s)	1386
BseBI	CCWGG	3 cut(s)	300, 346, 578
BseDI	CCNNGG	4 cut(s)	298, 665, 1214, 1612
BseGI	GGATG	3 cut(s)	192, 724, 1147
BseJI	GATNNNNATC	1 cut(s)	1386
BseLI	CCNNNNNNNGG	6 cut(s)	31, 172, 305, 329, 608, 1644
BseMI	GCAATG	1 cut(s)	1620
BseMII	CTCAG	3 cut(s)	411, 687, 1008
BseNI	ACTGG	2 cut(s)	388, 836
BseRI	GAGGAG	3 cut(s)	728, 1053, 1476
BseXI	GCAGC	4 cut(s)	328, 1039, 1486, 1643
BsgI	GTGCAG	1 cut(s)	1650
Bsh1236I	CGCG	1 cut(s)	796
BshFI	GGCC	2 cut(s)	193, 1604
BshNI	GGYRCC	3 cut(s)	54, 135, 846
BsiHKAI	GWGCWC	2 cut(s)	52, 1045
BsiSI	CCGG	1 cut(s)	1327
BslFI	GGGAC	4 cut(s)	134, 141, 188, 280
BslI	CCNNNNNNNGG	6 cut(s)	31, 172, 305, 329, 608, 1644
BsmAI	GTCTC	6 cut(s)	504, 581, 662, 1063, 1269, 1677
BsmFI	GGGAC	4 cut(s)	134, 141, 188, 280
BsmI	GAATGC	2 cut(s)	1303, 1339
BsnI	GGCC	2 cut(s)	193, 1604
Bso31I	GGTCTC	2 cut(s)	662, 1677
Bsp1286I	GDGCHC	3 cut(s)	52, 67, 1045
Bsp143I	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
Bsp19I	CCATGG	2 cut(s)	665, 1214
BspACI	CCGC	8 cut(s)	283, 403, 487, 794, 832, 1294, 1330, 1497
BspANI	GGCC	2 cut(s)	193, 1604
BspCNI	CTCAG	3 cut(s)	412, 686, 1009
BspFNI	CGCG	1 cut(s)	796
BspHI	TCATGA	1 cut(s)	502
BspLI	GGNNCC	6 cut(s)	36, 56, 137, 848, 1424, 1440
BspMAI	CTGCAG	1 cut(s)	778
BspMI	ACCTGC	2 cut(s)	46, 573
BspPI	GGATC	3 cut(s)	324, 635, 1312
BspQI	GCTCTTC	1 cut(s)	202
BspT107I	GGYRCC	3 cut(s)	54, 135, 846
BspTNI	GGTCTC	2 cut(s)	662, 1677
BsrDI	GCAATG	1 cut(s)	1620
BsrI	ACTGG	2 cut(s)	388, 836
BssECI	CCNNGG	4 cut(s)	298, 665, 1214, 1612
BssMI	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
BssNI	GRCGYC	1 cut(s)	1609
BssSI	CACGAG	1 cut(s)	1532
BssT1I	CCWWGG	2 cut(s)	665, 1214
Bst2BI	CACGAG	1 cut(s)	1532
Bst2UI	CCWGG	3 cut(s)	300, 346, 578
Bst4CI	ACNGT	4 cut(s)	125, 221, 258, 1616
Bst6I	CTCTTC	3 cut(s)	202, 1278, 1561
BstACI	GRCGYC	1 cut(s)	1609
BstAPI	GCANNNNNTGC	2 cut(s)	47, 1049
BstC8I	GCNNGC	1 cut(s)	651
BstDEI	CTNAG	4 cut(s)	420, 673, 1017, 1120
BstDSI	CCRYGG	3 cut(s)	665, 1214, 1612
BstF5I	GGATG	3 cut(s)	192, 724, 1147
BstFNI	CGCG	1 cut(s)	796
BstH2I	RGCGCY	1 cut(s)	618
BstHHI	GCGC	2 cut(s)	360, 617
BstKTI	GATC	7 cut(s)	97, 148, 319, 643, 1320, 1390, 1600
BstMAI	GTCTC	6 cut(s)	504, 581, 662, 1063, 1269, 1677
BstMBI	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
BstMWI	GCNNNNNNNGC	5 cut(s)	17, 47, 1049, 1601, 1631
BstNI	CCWGG	3 cut(s)	300, 346, 578
BstNSI	RCATGY	4 cut(s)	48, 115, 269, 653
BstSCI	CCNGG	3 cut(s)	298, 344, 576
BstSFI	CTRYAG	3 cut(s)	324, 558, 774
BstUI	CGCG	1 cut(s)	796
BstV1I	GCAGC	4 cut(s)	328, 1039, 1486, 1643
BstV2I	GAAGAC	1 cut(s)	862
BstX2I	RGATCY	4 cut(s)	94, 145, 316, 1317
BstXI	CCANNNNNNTGG	2 cut(s)	843, 888
BstYI	RGATCY	4 cut(s)	94, 145, 316, 1317
BsuI	GTATCC	1 cut(s)	574
BsuRI	GGCC	2 cut(s)	193, 1604
BtgI	CCRYGG	3 cut(s)	665, 1214, 1612
BtgZI	GCGATG	1 cut(s)	26
BtrI	CACGTC	1 cut(s)	1324
BtsCI	GGATG	3 cut(s)	192, 724, 1147
BtsIMutI	CAGTG	1 cut(s)	1158
BveI	ACCTGC	2 cut(s)	46, 573
Cac8I	GCNNGC	1 cut(s)	651
CciI	TCATGA	1 cut(s)	502
CfoI	GCGC	2 cut(s)	360, 617
Cfr13I	GGNCC	1 cut(s)	1603
CseI	GACGC	2 cut(s)	689, 1617
Csp6I	GTAC	5 cut(s)	136, 217, 372, 490, 1224
CspCI	CAANNNNNGTGG	2 cut(s)	97, 132
CviQI	GTAC	5 cut(s)	136, 217, 372, 490, 1224
DdeI	CTNAG	4 cut(s)	420, 673, 1017, 1120
DpnI	GATC	7 cut(s)	96, 147, 318, 642, 1319, 1389, 1599
DpnII	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
DrdI	GACNNNNNNGTC	1 cut(s)	1614
DseDI	GACNNNNNNGTC	1 cut(s)	1614
Eam1104I	CTCTTC	3 cut(s)	202, 1278, 1561
EarI	CTCTTC	3 cut(s)	202, 1278, 1561
EciI	GGCGGA	1 cut(s)	1345
Eco130I	CCWWGG	2 cut(s)	665, 1214
Eco24I	GRGCYC	1 cut(s)	67
Eco31I	GGTCTC	2 cut(s)	662, 1677
Eco32I	GATATC	2 cut(s)	351, 919
Eco47III	AGCGCT	1 cut(s)	616
Eco57I	CTGAAG	3 cut(s)	705, 1182, 1395
EcoRI	GAATTC	2 cut(s)	907, 1231
EcoRII	CCWGG	3 cut(s)	298, 344, 576
EcoRV	GATATC	2 cut(s)	351, 919
EcoT14I	CCWWGG	2 cut(s)	665, 1214
EcoT22I	ATGCAT	1 cut(s)	651
EcoT38I	GRGCYC	1 cut(s)	67
ErhI	CCWWGG	2 cut(s)	665, 1214
FaqI	GGGAC	4 cut(s)	134, 141, 188, 280
FauI	CCCGC	1 cut(s)	396
FbaI	TGATCA	1 cut(s)	1597
FblI	GTMKAC	1 cut(s)	561
Fnu4HI	GCNGC	6 cut(s)	284, 342, 1053, 1497, 1500, 1632
FokI	GGATG	3 cut(s)	199, 731, 1154
FriOI	GRGCYC	1 cut(s)	67
Fsp4HI	GCNGC	6 cut(s)	284, 342, 1053, 1497, 1500, 1632
FspBI	CTAG	5 cut(s)	198, 213, 390, 1338, 1407
GlaI	GCGC	2 cut(s)	359, 616
GluI	GCNGC	6 cut(s)	284, 342, 1053, 1497, 1500, 1632
GsuI	CTGGAG	2 cut(s)	1025, 1441
HaeII	RGCGCY	1 cut(s)	618
HaeIII	GGCC	2 cut(s)	193, 1604
HapII	CCGG	1 cut(s)	1327
HgaI	GACGC	2 cut(s)	689, 1617
HhaI	GCGC	2 cut(s)	360, 617
Hin1I	GRCGYC	1 cut(s)	1609
Hin6I	GCGC	2 cut(s)	358, 615
HinP1I	GCGC	2 cut(s)	358, 615
HincII	GTYRAC	2 cut(s)	238, 791
HindII	GTYRAC	2 cut(s)	238, 791
HpaII	CCGG	1 cut(s)	1327
HphI	GGTGA	5 cut(s)	63, 344, 554, 983, 1187
Hpy166II	GTNNAC	4 cut(s)	238, 562, 791, 1226
Hpy188I	TCNGA	6 cut(s)	229, 415, 550, 676, 943, 1682
Hpy188III	TCNNGA	6 cut(s)	143, 390, 503, 980, 1032, 1458
Hpy8I	GTNNAC	4 cut(s)	238, 562, 791, 1226
Hpy99I	CGWCG	1 cut(s)	1611
HpyAV	CCTTC	3 cut(s)	149, 897, 1209
HpyCH4III	ACNGT	4 cut(s)	125, 221, 258, 1616
HpyCH4IV	ACGT	1 cut(s)	1323
HpyCH4V	TGCA	8 cut(s)	41, 443, 568, 649, 776, 1130, 1137, 1631
HpyF10VI	GCNNNNNNNGC	5 cut(s)	17, 47, 1049, 1601, 1631
HpyF3I	CTNAG	4 cut(s)	420, 673, 1017, 1120
HpySE526I	ACGT	1 cut(s)	1323
Hsp92I	GRCGYC	1 cut(s)	1609
HspAI	GCGC	2 cut(s)	358, 615
KpnI	GGTACC	1 cut(s)	139
Ksp22I	TGATCA	1 cut(s)	1597
Kzo9I	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
LguI	GCTCTTC	1 cut(s)	202
LmnI	GCTCC	5 cut(s)	883, 1006, 1040, 1414, 1507
Lsp1109I	GCAGC	4 cut(s)	328, 1039, 1486, 1643
LweI	GCATC	4 cut(s)	541, 865, 939, 1018
MaeI	CTAG	5 cut(s)	198, 213, 390, 1338, 1407
MaeII	ACGT	1 cut(s)	1323
MaeIII	GTNAC	3 cut(s)	100, 958, 1616
MalI	GATC	7 cut(s)	96, 147, 318, 642, 1319, 1389, 1599
MboI	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
MfeI	CAATTG	3 cut(s)	87, 841, 1506
MflI	RGATCY	4 cut(s)	94, 145, 316, 1317
MhlI	GDGCHC	3 cut(s)	52, 67, 1045
MluCI	AATT	8 cut(s)	87, 128, 841, 907, 998, 1131, 1231, 1506
MlyI	GAGTC	4 cut(s)	170, 239, 758, 1439
MmeI	TCCRAC	1 cut(s)	622
Mph1103I	ATGCAT	1 cut(s)	651
MroXI	GAANNNNTTC	1 cut(s)	907
MseI	TTAA	1 cut(s)	273
MslI	CAYNNNNRTG	1 cut(s)	1163
MspA1I	CMGCKG	1 cut(s)	1499
MspI	CCGG	1 cut(s)	1327
MspR9I	CCNGG	3 cut(s)	300, 346, 578
MunI	CAATTG	3 cut(s)	87, 841, 1506
Mva1269I	GAATGC	2 cut(s)	1303, 1339
MvaI	CCWGG	3 cut(s)	300, 346, 578
MvnI	CGCG	1 cut(s)	796
MwoI	GCNNNNNNNGC	5 cut(s)	17, 47, 1049, 1601, 1631
NcoI	CCATGG	2 cut(s)	665, 1214
NdeII	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
NlaIV	GGNNCC	6 cut(s)	36, 56, 137, 848, 1424, 1440
NmuCI	GTSAC	1 cut(s)	1616
NsiI	ATGCAT	1 cut(s)	651
NspI	RCATGY	4 cut(s)	48, 115, 269, 653
OliI	CACNNNNGTG	1 cut(s)	1163
PaeI	GCATGC	1 cut(s)	653
PagI	TCATGA	1 cut(s)	502
PciI	ACATGT	3 cut(s)	44, 111, 265
PciSI	GCTCTTC	1 cut(s)	202
PctI	GAATGC	2 cut(s)	1303, 1339
PdmI	GAANNNNTTC	1 cut(s)	907
PfeI	GAWTC	7 cut(s)	335, 446, 467, 545, 770, 938, 1168
PflMI	CCANNNNNTGG	2 cut(s)	31, 608
PfoI	TCCNGGA	1 cut(s)	576
PkrI	GCNGC	6 cut(s)	285, 343, 1054, 1498, 1501, 1633
PleI	GAGTC	4 cut(s)	170, 238, 757, 1439
PpsI	GAGTC	4 cut(s)	170, 238, 757, 1439
PscI	ACATGT	3 cut(s)	44, 111, 265
PshBI	ATTAAT	1 cut(s)	273
PsiI	TTATAA	1 cut(s)	1365
Psp6I	CCWGG	3 cut(s)	298, 344, 576
PspGI	CCWGG	3 cut(s)	298, 344, 576
PspN4I	GGNNCC	6 cut(s)	36, 56, 137, 848, 1424, 1440
PspPI	GGNCC	1 cut(s)	1603
PstI	CTGCAG	1 cut(s)	778
PsuI	RGATCY	4 cut(s)	94, 145, 316, 1317
RsaI	GTAC	5 cut(s)	137, 218, 373, 491, 1225
RsaNI	GTAC	5 cut(s)	136, 217, 372, 490, 1224
RseI	CAYNNNNRTG	1 cut(s)	1163
SapI	GCTCTTC	1 cut(s)	202
SaqAI	TTAA	1 cut(s)	273
SatI	GCNGC	6 cut(s)	284, 342, 1053, 1497, 1500, 1632
Sau3AI	GATC	7 cut(s)	94, 145, 316, 640, 1317, 1387, 1597
Sau96I	GGNCC	1 cut(s)	1603
SchI	GAGTC	4 cut(s)	170, 239, 758, 1439
ScrFI	CCNGG	3 cut(s)	300, 346, 578
SduI	GDGCHC	3 cut(s)	52, 67, 1045
SfaNI	GCATC	4 cut(s)	541, 865, 939, 1018
SfcI	CTRYAG	3 cut(s)	324, 558, 774
SmiMI	CAYNNNNRTG	1 cut(s)	1163
SmlI	CTYRAG	2 cut(s)	311, 1030
SmoI	CTYRAG	2 cut(s)	311, 1030
SphI	GCATGC	1 cut(s)	653
Sse9I	AATT	8 cut(s)	87, 128, 841, 907, 998, 1131, 1231, 1506
SsiI	CCGC	8 cut(s)	283, 403, 487, 794, 832, 1294, 1330, 1497
SspMI	CTAG	5 cut(s)	198, 213, 390, 1338, 1407
StyD4I	CCNGG	3 cut(s)	298, 344, 576
StyI	CCWWGG	2 cut(s)	665, 1214
TaaI	ACNGT	4 cut(s)	125, 221, 258, 1616
TaiI	ACGT	1 cut(s)	1326
TaqI	TCGA	1 cut(s)	435
TasI	AATT	8 cut(s)	87, 128, 841, 907, 998, 1131, 1231, 1506
TatI	WGTACW	1 cut(s)	1223
TauI	GCSGC	2 cut(s)	286, 1499
TfiI	GAWTC	7 cut(s)	335, 446, 467, 545, 770, 938, 1168
Tru1I	TTAA	1 cut(s)	273
Tru9I	TTAA	1 cut(s)	273
TscAI	CASTG	1 cut(s)	1165
TseFI	GTSAC	1 cut(s)	1616
TseI	GCWGC	4 cut(s)	341, 1052, 1499, 1631
Tsp45I	GTSAC	1 cut(s)	1616
TspDTI	ATGAA	4 cut(s)	735, 747, 875, 1398
TspGWI	ACGGA	1 cut(s)	1243
TspRI	CASTG	1 cut(s)	1165
Van91I	CCANNNNNTGG	2 cut(s)	31, 608
VspI	ATTAAT	1 cut(s)	273
XapI	RAATTY	3 cut(s)	128, 907, 1231
XbaI	TCTAGA	1 cut(s)	389
XceI	RCATGY	4 cut(s)	48, 115, 269, 653
XcmI	CCANNNNNNNNNTGG	1 cut(s)	605
XmiI	GTMKAC	1 cut(s)	561
XmnI	GAANNNNTTC	1 cut(s)	907
XspI	CTAG	5 cut(s)	198, 213, 390, 1338, 1407
Zsp2I	ATGCAT	1 cut(s)	651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.