Rh3AG096500

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0009476
Physical Location & Seq
Reverse (-)
8043056 .. 8046130
3075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG096500.1

Sequence Viewer

Length: 1686 bp
ATGGATAGTGGGATGGTAGCTGACCATTCTGTGGAACCTGCAATATGTGCTCTGTGCCACAGGGCTCTTTCACCCGAAAATGAGGCAATTGGAGATCTTGTAACTGCCAACATATGTGGGGACTGTAAATTTTTGTACCTTGAAGATCTTGGTACCCCCACACGGGACTCTTATAGGATGAGGCCGTCTAGGAGAAGAAGAGCTAGGTACAGTAGTTCCGAGTCGGTTGACGATGTTCTCTCACAACATTTCTCACATATGATTAATCTGGTGCGGCAAAATCAGTCCCCTGGCTCTGGCCTTGAGCATCTACCTGTAGATGGTGATTCTGCTGCCAGGATATCGCAGCGCACAAGTTCCCGTACTACACCAACTGGGTCTAGAAGATGGAGGCGGGTTCTCTCTGATACTGAGAGTGATGGTTTCGATAATGCGGATTCTCTCTATGGGGAGAGTGAATCAAATGTCAGTTTTGGGCGGTACAGGGTGTCTCATGATGTGAGTGATGTAGTTTCTTTTAGTGCCTATGGTGGTGATTCTGATGCTTCTGTAGACCTGCATGGTTTCCTGGATACGGAGACATTTATCCAACCAGATGATGGAAGCGCTGTTGATAGTGATACTGACATTGATCCAATGCATGCTGGTCTCAACCCATGGAACTCAGATGACGCTGAAGAAGATGATGACGATGATGACGATGACGATGATGAGGAGGATGAAGAAGATGATGAATGGGAAGAAGTTGAGTCTGTGGAAAACATGGTTGAATCTGCAGAAGCCAATAGTCAACCGCGAAACCCTTTGATTTTGAGTTCTGGTAGAAGAAACCGCCCAGTCAATTGGCACCAACGAAGACATATTACTGAAACTGATGCTCCACTTCATTGGGGAATGAGGGGAAGGAATTCCCGTGATATCTTATCTAACTTCGATGATTCAGACATGATGCCTTATGTTACAAATTCTGGTGATTATCTTGATGCAGTAGGCTTTGAAGAATTGCTGGAGCATCTTGCTGAGGCAGACAGCTTAAGACGAGGAGCACCTCCTGCTGCTGTCTCGTTTTTGAATAATCTGCCTCTCATTCTTATTGGTAAGGAACATGAGAAGCATGATGACTTAGCCTGTGCAATTTGCAAGGATGTATTGACTATTGGCACTGAAGTGAATCAGCTTCCTTGCTTTCACTTGTATCACCCTTCCTGTATTCTGCCATGGTTGAGTACACGGAATTCTTGCCCCCTTTGTCGTTATGAGCTACCAACTGATGACAGAGACTACGAAGAGGGGAAGCGGAATGCTGGTGGTAGAGTGGATATCCACGTCCGGCGGAATGCTAGAGAGGACAGGTCTGCTGGTGTTTATAATAGAGCCGAAGAAGATGAAGATCATGCTTTTAGTGAAACTAGAGTGGAGCATAGGTTCCAAGTAGGTAGGGAACCTGACTCTAATACCTCCGGAGGAGAAAATAATCGGGGGAGTTGGTTTCTTCTTGCCGCTGCTCCAATTGTTAGTCTTGTGGGCATAGTTCTCGTGCTGTGGTTGGGAGCTCCCCTAATGGAAAGAAGAGGTCTGGCAGGACAGGGCAACTTTGCTGATCAGGCCCAACGCCACGGTCATATTGCTGGTGCAGCACCCCACCACAGGCAGAATAGAAGCAGGAGGTGGTGGTCTCTTTTCTGA

Protein Analysis

561

Amino Acids

62.82

Weight (kDa)

4.71

Isoelectric Point (pI)

56.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 376 - 418 9e-11 Ring finger domain
zf-C3HC4_2 PF13923 377 - 417 5.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 377 - 418 5.3e-06 RING-H2 zinc finger domain
zf-C3HC4 PF00097 377 - 417 6.4e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1368
Acc36I ACCTGC 2 cut(s) 46, 564
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 152, 846
AccB7I CCANNNNNTGG 2 cut(s) 31, 599
AccI GTMKAC 1 cut(s) 552
AccII CGCG 1 cut(s) 796
AccIII TCCGGA 1 cut(s) 1460
AciI CCGC 9 cut(s) 274, 394, 434, 478, 794, 832, 1297, 1333, 1500
AclWI GGATC 1 cut(s) 626
AcsI RAATTY 4 cut(s) 128, 907, 964, 1234
AcuI CTGAAG 2 cut(s) 696, 1185
AfaI GTAC 6 cut(s) 137, 154, 209, 364, 482, 1228
AfeI AGCGCT 1 cut(s) 607
AfiI CCNNNNNNNGG 8 cut(s) 31, 162, 163, 296, 320, 574, 599, 1647
AflII CTTAAG 1 cut(s) 1033
AgsI TTSAA 4 cut(s) 143, 770, 998, 1072
AjiI CACGTC 1 cut(s) 1327
AjnI CCWGG 3 cut(s) 289, 335, 567
AleI CACNNNNGTG 1 cut(s) 1166
AloI GAACNNNNNNTCC 2 cut(s) 1409, 1441
AluBI AGCT 6 cut(s) 20, 203, 1032, 1177, 1261, 1553
AluI AGCT 6 cut(s) 20, 203, 1032, 1177, 1261, 1553
Alw21I GWGCWC 3 cut(s) 52, 1048, 1555
Alw26I GTCTC 6 cut(s) 495, 572, 653, 1066, 1272, 1680
AlwI GGATC 1 cut(s) 626
Aor13HI TCCGGA 1 cut(s) 1460
Aor51HI AGCGCT 1 cut(s) 607
AoxI GGCC 3 cut(s) 182, 298, 1605
ApeKI GCWGC 5 cut(s) 332, 346, 1055, 1502, 1634
ApoI RAATTY 4 cut(s) 128, 907, 964, 1234
AseI ATTAAT 1 cut(s) 264
Asp700I GAANNNNTTC 1 cut(s) 907
Asp718I GGTACC 1 cut(s) 152
AspLEI GCGC 2 cut(s) 351, 608
AspS9I GGNCC 1 cut(s) 1606
AsuHPI GGTGA 5 cut(s) 63, 335, 545, 983, 1190
BaeI ACNNNNGTAYC 2 cut(s) 199, 232
BanI GGYRCC 2 cut(s) 152, 846
BanII GRGCYC 2 cut(s) 67, 1555
BarI GAAGNNNNNNTAC 2 cut(s) 847, 879
BauI CACGAG 1 cut(s) 1535
BbsI GAAGAC 1 cut(s) 862
Bbv12I GWGCWC 3 cut(s) 52, 1048, 1555
BbvCI CCTCAGC 1 cut(s) 1020
BbvI GCAGC 5 cut(s) 319, 358, 1042, 1489, 1646
BccI CCATC 5 cut(s) 7, 314, 381, 413, 593
BceAI ACGGC 1 cut(s) 169
BcgI CGANNNNNNTGC 2 cut(s) 1516, 1550
BciT130I CCWGG 3 cut(s) 291, 337, 569
BciVI GTATCC 1 cut(s) 565
BclI TGATCA 1 cut(s) 1600
BcoDI GTCTC 6 cut(s) 495, 572, 653, 1066, 1272, 1680
BfaI CTAG 5 cut(s) 189, 204, 381, 1341, 1410
BfmI CTRYAG 3 cut(s) 315, 549, 774
BfoI RGCGCY 1 cut(s) 609
BfrI CTTAAG 1 cut(s) 1033
BfuAI ACCTGC 2 cut(s) 46, 564
BfuI GTATCC 1 cut(s) 565
BglII AGATCT 2 cut(s) 94, 145
BisI GCNGC 7 cut(s) 275, 333, 347, 1056, 1500, 1503, 1635
BlsI GCNGC 7 cut(s) 276, 334, 348, 1057, 1501, 1504, 1636
Bme1390I CCNGG 3 cut(s) 291, 337, 569
BmgBI CACGTC 1 cut(s) 1327
BmgT120I GGNCC 1 cut(s) 1606
BmiI GGNNCC 5 cut(s) 36, 154, 848, 1427, 1443
BmrFI CCNGG 3 cut(s) 291, 337, 569
BmrI ACTGGG 2 cut(s) 384, 830
BmsI GCATC 6 cut(s) 316, 532, 865, 939, 973, 1021
BmuI ACTGGG 2 cut(s) 384, 830
BpiI GAAGAC 1 cut(s) 862
BpmI CTGGAG 1 cut(s) 1028
Bpu10I CCTNAGC 1 cut(s) 1020
BpuEI CTTGAG 1 cut(s) 323
BsaBI GATNNNNATC 1 cut(s) 1389
BsaI GGTCTC 2 cut(s) 653, 1680
BsaJI CCNNGG 4 cut(s) 289, 656, 1217, 1615
BsaWI WCCGGW 1 cut(s) 1460
BsaXI ACNNNNNCTCC 6 cut(s) 84, 114, 862, 892, 1409, 1439
Bsc4I CCNNNNNNNGG 8 cut(s) 31, 162, 163, 296, 320, 574, 599, 1647
Bse1I ACTGG 2 cut(s) 379, 836
Bse8I GATNNNNATC 1 cut(s) 1389
BseAI TCCGGA 1 cut(s) 1460
BseBI CCWGG 3 cut(s) 291, 337, 569
BseDI CCNNGG 4 cut(s) 289, 656, 1217, 1615
BseGI GGATG 4 cut(s) 18, 183, 724, 1150
BseJI GATNNNNATC 1 cut(s) 1389
BseLI CCNNNNNNNGG 8 cut(s) 31, 162, 163, 296, 320, 574, 599, 1647
BseMII CTCAG 3 cut(s) 402, 678, 1011
BseNI ACTGG 2 cut(s) 379, 836
BseRI GAGGAG 3 cut(s) 728, 1056, 1479
BseXI GCAGC 5 cut(s) 319, 358, 1042, 1489, 1646
BsgI GTGCAG 1 cut(s) 1653
Bsh1236I CGCG 1 cut(s) 796
BshFI GGCC 3 cut(s) 184, 300, 1607
BshNI GGYRCC 2 cut(s) 152, 846
BsiHKAI GWGCWC 3 cut(s) 52, 1048, 1555
BsiSI CCGG 2 cut(s) 1330, 1461
BslFI GGGAC 3 cut(s) 134, 179, 271
BslI CCNNNNNNNGG 8 cut(s) 31, 162, 163, 296, 320, 574, 599, 1647
BsmAI GTCTC 6 cut(s) 495, 572, 653, 1066, 1272, 1680
BsmFI GGGAC 3 cut(s) 134, 179, 271
BsmI GAATGC 2 cut(s) 1306, 1342
BsnI GGCC 3 cut(s) 184, 300, 1607
Bso31I GGTCTC 2 cut(s) 653, 1680
Bsp1286I GDGCHC 4 cut(s) 52, 67, 1048, 1555
Bsp13I TCCGGA 1 cut(s) 1460
Bsp143I GATC 5 cut(s) 94, 145, 631, 1390, 1600
Bsp19I CCATGG 2 cut(s) 656, 1217
BspACI CCGC 9 cut(s) 274, 394, 434, 478, 794, 832, 1297, 1333, 1500
BspANI GGCC 3 cut(s) 184, 300, 1607
BspCNI CTCAG 3 cut(s) 403, 677, 1012
BspEI TCCGGA 1 cut(s) 1460
BspFNI CGCG 1 cut(s) 796
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 5 cut(s) 36, 154, 848, 1427, 1443
BspMAI CTGCAG 1 cut(s) 778
BspMI ACCTGC 2 cut(s) 46, 564
BspPI GGATC 1 cut(s) 626
BspQI GCTCTTC 1 cut(s) 193
BspT107I GGYRCC 2 cut(s) 152, 846
BspTI CTTAAG 1 cut(s) 1033
BspTNI GGTCTC 2 cut(s) 653, 1680
BsrI ACTGG 2 cut(s) 379, 836
BssECI CCNNGG 4 cut(s) 289, 656, 1217, 1615
BssMI GATC 5 cut(s) 94, 145, 631, 1390, 1600
BssSI CACGAG 1 cut(s) 1535
BssT1I CCWWGG 2 cut(s) 656, 1217
Bst2BI CACGAG 1 cut(s) 1535
Bst2UI CCWGG 3 cut(s) 291, 337, 569
Bst4CI ACNGT 3 cut(s) 125, 212, 1619
Bst6I CTCTTC 3 cut(s) 193, 1281, 1564
BstAFI CTTAAG 1 cut(s) 1033
BstAPI GCANNNNNTGC 2 cut(s) 47, 1052
BstC8I GCNNGC 1 cut(s) 642
BstDEI CTNAG 4 cut(s) 411, 664, 1020, 1123
BstDSI CCRYGG 3 cut(s) 656, 1217, 1615
BstF5I GGATG 4 cut(s) 18, 183, 724, 1150
BstFNI CGCG 1 cut(s) 796
BstH2I RGCGCY 1 cut(s) 609
BstHHI GCGC 2 cut(s) 351, 608
BstKTI GATC 5 cut(s) 97, 148, 634, 1393, 1603
BstMAI GTCTC 6 cut(s) 495, 572, 653, 1066, 1272, 1680
BstMBI GATC 5 cut(s) 94, 145, 631, 1390, 1600
BstMWI GCNNNNNNNGC 4 cut(s) 47, 1052, 1604, 1634
BstNI CCWGG 3 cut(s) 291, 337, 569
BstNSI RCATGY 1 cut(s) 644
BstSCI CCNGG 3 cut(s) 289, 335, 567
BstSFI CTRYAG 3 cut(s) 315, 549, 774
BstUI CGCG 1 cut(s) 796
BstV1I GCAGC 5 cut(s) 319, 358, 1042, 1489, 1646
BstV2I GAAGAC 1 cut(s) 862
BstX2I RGATCY 2 cut(s) 94, 145
BstXI CCANNNNNNTGG 2 cut(s) 843, 888
BstYI RGATCY 2 cut(s) 94, 145
BsuI GTATCC 1 cut(s) 565
BsuRI GGCC 3 cut(s) 184, 300, 1607
BtgI CCRYGG 3 cut(s) 656, 1217, 1615
BtrI CACGTC 1 cut(s) 1327
BtsCI GGATG 4 cut(s) 18, 183, 724, 1150
BtsIMutI CAGTG 1 cut(s) 1161
BveI ACCTGC 2 cut(s) 46, 564
Cac8I GCNNGC 1 cut(s) 642
CciI TCATGA 1 cut(s) 493
CfoI GCGC 2 cut(s) 351, 608
Cfr13I GGNCC 1 cut(s) 1606
CseI GACGC 1 cut(s) 680
Csp6I GTAC 6 cut(s) 136, 153, 208, 363, 481, 1227
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviQI GTAC 6 cut(s) 136, 153, 208, 363, 481, 1227
DdeI CTNAG 4 cut(s) 411, 664, 1020, 1123
DpnI GATC 5 cut(s) 96, 147, 633, 1392, 1602
DpnII GATC 5 cut(s) 94, 145, 631, 1390, 1600
Eam1104I CTCTTC 3 cut(s) 193, 1281, 1564
EarI CTCTTC 3 cut(s) 193, 1281, 1564
EciI GGCGGA 1 cut(s) 1348
Ecl136II GAGCTC 1 cut(s) 1553
Eco130I CCWWGG 2 cut(s) 656, 1217
Eco24I GRGCYC 2 cut(s) 67, 1555
Eco31I GGTCTC 2 cut(s) 653, 1680
Eco32I GATATC 3 cut(s) 342, 919, 1321
Eco47III AGCGCT 1 cut(s) 607
Eco53kI GAGCTC 1 cut(s) 1553
Eco57I CTGAAG 2 cut(s) 696, 1185
EcoICRI GAGCTC 1 cut(s) 1553
EcoRI GAATTC 2 cut(s) 907, 1234
EcoRII CCWGG 3 cut(s) 289, 335, 567
EcoRV GATATC 3 cut(s) 342, 919, 1321
EcoT14I CCWWGG 2 cut(s) 656, 1217
EcoT22I ATGCAT 1 cut(s) 642
EcoT38I GRGCYC 2 cut(s) 67, 1555
ErhI CCWWGG 2 cut(s) 656, 1217
FaqI GGGAC 3 cut(s) 134, 179, 271
FauI CCCGC 1 cut(s) 387
FauNDI CATATG 2 cut(s) 113, 258
FbaI TGATCA 1 cut(s) 1600
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 7 cut(s) 275, 333, 347, 1056, 1500, 1503, 1635
FokI GGATG 4 cut(s) 25, 190, 731, 1157
FriOI GRGCYC 2 cut(s) 67, 1555
Fsp4HI GCNGC 7 cut(s) 275, 333, 347, 1056, 1500, 1503, 1635
FspBI CTAG 5 cut(s) 189, 204, 381, 1341, 1410
GlaI GCGC 2 cut(s) 350, 607
GluI GCNGC 7 cut(s) 275, 333, 347, 1056, 1500, 1503, 1635
GsuI CTGGAG 1 cut(s) 1028
HaeII RGCGCY 1 cut(s) 609
HaeIII GGCC 3 cut(s) 184, 300, 1607
HapII CCGG 2 cut(s) 1330, 1461
HgaI GACGC 1 cut(s) 680
HhaI GCGC 2 cut(s) 351, 608
Hin6I GCGC 2 cut(s) 349, 606
HinP1I GCGC 2 cut(s) 349, 606
HincII GTYRAC 2 cut(s) 229, 791
HindII GTYRAC 2 cut(s) 229, 791
HpaII CCGG 2 cut(s) 1330, 1461
HphI GGTGA 5 cut(s) 63, 335, 545, 983, 1190
Hpy166II GTNNAC 4 cut(s) 229, 553, 791, 1229
Hpy188I TCNGA 6 cut(s) 220, 406, 541, 667, 943, 1685
Hpy188III TCNNGA 4 cut(s) 381, 494, 980, 1461
Hpy8I GTNNAC 4 cut(s) 229, 553, 791, 1229
HpyAV CCTTC 2 cut(s) 897, 1212
HpyCH4III ACNGT 3 cut(s) 125, 212, 1619
HpyCH4IV ACGT 1 cut(s) 1326
HpyCH4V TGCA 8 cut(s) 41, 559, 640, 776, 986, 1133, 1140, 1634
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 1052, 1604, 1634
HpyF3I CTNAG 4 cut(s) 411, 664, 1020, 1123
HpySE526I ACGT 1 cut(s) 1326
HspAI GCGC 2 cut(s) 349, 606
Kpn2I TCCGGA 1 cut(s) 1460
KpnI GGTACC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 1600
Kzo9I GATC 5 cut(s) 94, 145, 631, 1390, 1600
LguI GCTCTTC 1 cut(s) 193
LmnI GCTCC 7 cut(s) 883, 1009, 1043, 1417, 1510, 1550, 1558
Lsp1109I GCAGC 5 cut(s) 319, 358, 1042, 1489, 1646
LweI GCATC 6 cut(s) 316, 532, 865, 939, 973, 1021
MaeI CTAG 5 cut(s) 189, 204, 381, 1341, 1410
MaeII ACGT 1 cut(s) 1326
MaeIII GTNAC 2 cut(s) 100, 958
MalI GATC 5 cut(s) 96, 147, 633, 1392, 1602
MboI GATC 5 cut(s) 94, 145, 631, 1390, 1600
MfeI CAATTG 3 cut(s) 87, 841, 1509
MflI RGATCY 2 cut(s) 94, 145
MhlI GDGCHC 4 cut(s) 52, 67, 1048, 1555
MluCI AATT 9 cut(s) 87, 128, 841, 907, 964, 1001, 1134, 1234, 1509
MlyI GAGTC 4 cut(s) 161, 230, 758, 1442
MmeI TCCRAC 1 cut(s) 613
Mph1103I ATGCAT 1 cut(s) 642
MroI TCCGGA 1 cut(s) 1460
MroXI GAANNNNTTC 1 cut(s) 907
MseI TTAA 2 cut(s) 264, 1034
MslI CAYNNNNRTG 1 cut(s) 1166
MspA1I CMGCKG 1 cut(s) 1502
MspCI CTTAAG 1 cut(s) 1033
MspI CCGG 2 cut(s) 1330, 1461
MspR9I CCNGG 3 cut(s) 291, 337, 569
MunI CAATTG 3 cut(s) 87, 841, 1509
Mva1269I GAATGC 2 cut(s) 1306, 1342
MvaI CCWGG 3 cut(s) 291, 337, 569
MvnI CGCG 1 cut(s) 796
MwoI GCNNNNNNNGC 4 cut(s) 47, 1052, 1604, 1634
NcoI CCATGG 2 cut(s) 656, 1217
NdeI CATATG 2 cut(s) 113, 258
NdeII GATC 5 cut(s) 94, 145, 631, 1390, 1600
NlaIV GGNNCC 5 cut(s) 36, 154, 848, 1427, 1443
NsiI ATGCAT 1 cut(s) 642
NspI RCATGY 1 cut(s) 644
OliI CACNNNNGTG 1 cut(s) 1166
PaeI GCATGC 1 cut(s) 644
PagI TCATGA 1 cut(s) 493
PciSI GCTCTTC 1 cut(s) 193
PcsI WCGNNNNNNNCGW 1 cut(s) 696
PctI GAATGC 2 cut(s) 1306, 1342
PdmI GAANNNNTTC 1 cut(s) 907
PfeI GAWTC 7 cut(s) 326, 437, 458, 536, 770, 938, 1171
PflMI CCANNNNNTGG 2 cut(s) 31, 599
PfoI TCCNGGA 1 cut(s) 567
PkrI GCNGC 7 cut(s) 276, 334, 348, 1057, 1501, 1504, 1636
PleI GAGTC 4 cut(s) 161, 229, 757, 1442
PpsI GAGTC 4 cut(s) 161, 229, 757, 1442
PshBI ATTAAT 1 cut(s) 264
PsiI TTATAA 1 cut(s) 1368
Psp124BI GAGCTC 1 cut(s) 1555
Psp6I CCWGG 3 cut(s) 289, 335, 567
PspGI CCWGG 3 cut(s) 289, 335, 567
PspN4I GGNNCC 5 cut(s) 36, 154, 848, 1427, 1443
PspPI GGNCC 1 cut(s) 1606
PstI CTGCAG 1 cut(s) 778
PsuI RGATCY 2 cut(s) 94, 145
RsaI GTAC 6 cut(s) 137, 154, 209, 364, 482, 1228
RsaNI GTAC 6 cut(s) 136, 153, 208, 363, 481, 1227
RseI CAYNNNNRTG 1 cut(s) 1166
SacI GAGCTC 1 cut(s) 1555
SapI GCTCTTC 1 cut(s) 193
SaqAI TTAA 2 cut(s) 264, 1034
SatI GCNGC 7 cut(s) 275, 333, 347, 1056, 1500, 1503, 1635
Sau3AI GATC 5 cut(s) 94, 145, 631, 1390, 1600
Sau96I GGNCC 1 cut(s) 1606
SchI GAGTC 4 cut(s) 161, 230, 758, 1442
ScrFI CCNGG 3 cut(s) 291, 337, 569
SduI GDGCHC 4 cut(s) 52, 67, 1048, 1555
SfaNI GCATC 6 cut(s) 316, 532, 865, 939, 973, 1021
SfcI CTRYAG 3 cut(s) 315, 549, 774
SmiMI CAYNNNNRTG 1 cut(s) 1166
SmlI CTYRAG 2 cut(s) 302, 1033
SmoI CTYRAG 2 cut(s) 302, 1033
SphI GCATGC 1 cut(s) 644
Sse9I AATT 9 cut(s) 87, 128, 841, 907, 964, 1001, 1134, 1234, 1509
SsiI CCGC 9 cut(s) 274, 394, 434, 478, 794, 832, 1297, 1333, 1500
SspMI CTAG 5 cut(s) 189, 204, 381, 1341, 1410
SstI GAGCTC 1 cut(s) 1555
StyD4I CCNGG 3 cut(s) 289, 335, 567
StyI CCWWGG 2 cut(s) 656, 1217
TaaI ACNGT 3 cut(s) 125, 212, 1619
TaiI ACGT 1 cut(s) 1329
TaqI TCGA 2 cut(s) 426, 933
TasI AATT 9 cut(s) 87, 128, 841, 907, 964, 1001, 1134, 1234, 1509
TatI WGTACW 1 cut(s) 1226
TauI GCSGC 2 cut(s) 277, 1502
TfiI GAWTC 7 cut(s) 326, 437, 458, 536, 770, 938, 1171
Tru1I TTAA 2 cut(s) 264, 1034
Tru9I TTAA 2 cut(s) 264, 1034
TscAI CASTG 1 cut(s) 1168
TseI GCWGC 5 cut(s) 332, 346, 1055, 1502, 1634
TspDTI ATGAA 4 cut(s) 735, 747, 875, 1401
TspGWI ACGGA 2 cut(s) 590, 1246
TspRI CASTG 1 cut(s) 1168
Van91I CCANNNNNTGG 2 cut(s) 31, 599
Vha464I CTTAAG 1 cut(s) 1033
VspI ATTAAT 1 cut(s) 264
XapI RAATTY 4 cut(s) 128, 907, 964, 1234
XbaI TCTAGA 1 cut(s) 380
XceI RCATGY 1 cut(s) 644
XcmI CCANNNNNNNNNTGG 1 cut(s) 596
XmiI GTMKAC 1 cut(s) 552
XmnI GAANNNNTTC 1 cut(s) 907
XspI CTAG 5 cut(s) 189, 204, 381, 1341, 1410
Zsp2I ATGCAT 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.