Rh3BG099200

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0009476
Physical Location & Seq
Reverse (-)
7935742 .. 7938872
3131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG099200.1

Sequence Viewer

Length: 1629 bp
ATGGATAGTGGGATGGTGGCTGACCATTCTGTGGAACCTGCAACATGTGCTCGGTGCCACAGGGCTCTTTCACCCGAAAATGAGTCAATTGGAGATCTTGTAACTGCCAACATGTGTGGGGACTGTAAATTTTTGTACTTTGAAGATCTTGGTACCCCCACACGGGACTCTTATAGGATGAGGCCGTCTAGGAGAAGAAGAGCTAGGTACAGTAGTTCCGAGTCGGTTGACGATGTTCTCTCACATTTCTCACATATGATTAATCTGGTGCGGCAAAATCAGTCCCCTGGCTCTGGGCTTGAGCATCTACCTGTAGATGGTGATTCTGCTGCCAGGATATCGCAGCGCACAAGTTCCCGTACTACACCAACTGGGTCTAGAAGATGGAGGCGGGTTCTCTCTGATAGTGAGAGTGATGGTTTCGATAATGCGGATTCTCTCTATGGGGAGAGTGAATCAAATGTCAGTTTTGGGCGGTACAGGGTGTCTCATGATGTGAGTGATGTAGTTTCTTTTAGTGCCTATGGTGGTGATTCTGATGCTTCTGTAGACCTGCATGGTTTCCTGGATACAGAGACATTGATCCAACCAGATGATGGAAGCGCTTTTGATAGTGATACTGACATTGATCCAATGCATGCTGGTCTCAACCCATGGAACTCAGATGACGCTGAAGAAGATGATGACGATGACGATGATGAGGAGGATGAAGAAGATGATGAATGGGAAGAAGTTGAGTCTGTGGAAAACATGGTTGAATCTGCAGAAGCCAATTCTGGTAGAAGAAACCGCCCAGTCAATTGGCACCAACGAAGACATATTACTGAAACTGATGCTCCACTTCATTGGGGAATGAGGGGAAGGAATTCCCGTGATATCTTATCTAACTTCGATGATTATGTTACAGATTCTGGTGATTATCTTGATGCAGTAGGCTTTGAAGAATTGCTGGAGCATCTTGCTGAGGCAGACAGCTTAAGACGAGGAGCACCTCCTGCTGCTGTCTCGTTTTTGAATAATCTGCCTATCATTCTTATTGGTAAGGAACATGAGAAGCATGATGACTTAGCCTGTGCAATTTGCAAGGATGTCTTGACTATTGGCACTGAAGTGAATCAGCTTCCTTGCTTTCACTTGTATCACCCTTCCTGTATTCTGCCATGGTTGAGTACACGGAATTCTTGCCCCCTTTGTCGTTACGAGCTACCAACTGATGACAGAGACTACGAAGAGGGGAAGCGGAATGCTGGTGGTAGAGTGGAGATCCACGTCCGGCGGAATGCTAGAGAGGACAGGTCTGCTGGTGTTTATAATAGAGCTGAAGAAGATGAAGATCATGCTTTTAGTGAAACTAGAGTGGAGCATAGGTTCCAAGTAGGTAGGGAACCTGACTCTAATACCTCCGGAGGAGAAAATAATCGGGGGAGTTGGTTTCTTTTTGCCGCTGCTCCAATTGTTAGTCTTGTGGGCATAGTTCTCGTGCTTTGGTTGGGAGCTCCCCTAATGGAAAGAAGAGGTCTGGCAGGACAGGGCAACTTTACTGATCAGGCCCGACGCCACGGTCATATTGCTGGTGCAGCACCCCACCACAGGCAGAATAGAAGCAGGAGGTGGTGGTCTCTTTTCTGA

Protein Analysis

542

Amino Acids

60.88

Weight (kDa)

4.8

Isoelectric Point (pI)

57.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 357 - 399 8.7e-11 Ring finger domain
zf-C3HC4_2 PF13923 358 - 398 4.9e-08 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 358 - 399 4.8e-06 RING-H2 zinc finger domain
zf-C3HC4 PF00097 358 - 398 6.1e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1311
AasI GACNNNNNNGTC 1 cut(s) 1560
Acc36I ACCTGC 2 cut(s) 46, 561
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 3 cut(s) 54, 152, 804
AccB7I CCANNNNNTGG 2 cut(s) 31, 596
AccI GTMKAC 1 cut(s) 549
AccIII TCCGGA 1 cut(s) 1403
AciI CCGC 8 cut(s) 271, 391, 431, 475, 790, 1240, 1276, 1443
AclWI GGATC 3 cut(s) 577, 623, 1258
AcsI RAATTY 3 cut(s) 128, 865, 1177
AcuI CTGAAG 3 cut(s) 693, 1128, 1341
AcyI GRCGYC 1 cut(s) 1555
AfaI GTAC 6 cut(s) 137, 154, 209, 361, 479, 1171
AfeI AGCGCT 1 cut(s) 604
AfiI CCNNNNNNNGG 7 cut(s) 31, 162, 163, 293, 317, 596, 1590
AflII CTTAAG 1 cut(s) 976
AflIII ACRYGT 2 cut(s) 44, 111
AgsI TTSAA 4 cut(s) 143, 758, 941, 1015
AjiI CACGTC 1 cut(s) 1270
AjnI CCWGG 3 cut(s) 286, 332, 564
AleI CACNNNNGTG 1 cut(s) 1109
AloI GAACNNNNNNTCC 2 cut(s) 1352, 1384
AluBI AGCT 6 cut(s) 203, 975, 1120, 1204, 1319, 1496
AluI AGCT 6 cut(s) 203, 975, 1120, 1204, 1319, 1496
Alw21I GWGCWC 3 cut(s) 52, 991, 1498
Alw26I GTCTC 6 cut(s) 492, 569, 650, 1009, 1215, 1623
AlwI GGATC 3 cut(s) 577, 623, 1258
AlwNI CAGNNNCTG 1 cut(s) 911
Aor13HI TCCGGA 1 cut(s) 1403
Aor51HI AGCGCT 1 cut(s) 604
AoxI GGCC 2 cut(s) 182, 1548
ApeKI GCWGC 5 cut(s) 329, 343, 998, 1445, 1577
ApoI RAATTY 3 cut(s) 128, 865, 1177
AseI ATTAAT 1 cut(s) 261
Asp700I GAANNNNTTC 1 cut(s) 865
Asp718I GGTACC 1 cut(s) 152
AspLEI GCGC 2 cut(s) 348, 605
AspS9I GGNCC 1 cut(s) 1549
AsuHPI GGTGA 5 cut(s) 63, 332, 542, 926, 1133
BaeI ACNNNNGTAYC 2 cut(s) 199, 232
BanI GGYRCC 3 cut(s) 54, 152, 804
BanII GRGCYC 2 cut(s) 67, 1498
BarI GAAGNNNNNNTAC 2 cut(s) 805, 837
BauI CACGAG 1 cut(s) 1478
BbsI GAAGAC 1 cut(s) 820
Bbv12I GWGCWC 3 cut(s) 52, 991, 1498
BbvCI CCTCAGC 1 cut(s) 963
BbvI GCAGC 5 cut(s) 316, 355, 985, 1432, 1589
BccI CCATC 5 cut(s) 7, 311, 378, 410, 590
BceAI ACGGC 1 cut(s) 169
BcgI CGANNNNNNTGC 2 cut(s) 1459, 1493
BciT130I CCWGG 3 cut(s) 288, 334, 566
BciVI GTATCC 1 cut(s) 562
BclI TGATCA 1 cut(s) 1543
BcoDI GTCTC 6 cut(s) 492, 569, 650, 1009, 1215, 1623
BfaI CTAG 5 cut(s) 189, 204, 378, 1284, 1353
BfmI CTRYAG 3 cut(s) 312, 546, 762
BfoI RGCGCY 1 cut(s) 606
BfrI CTTAAG 1 cut(s) 976
BfuAI ACCTGC 2 cut(s) 46, 561
BfuI GTATCC 1 cut(s) 562
BglII AGATCT 2 cut(s) 94, 145
BisI GCNGC 7 cut(s) 272, 330, 344, 999, 1443, 1446, 1578
BlsI GCNGC 7 cut(s) 273, 331, 345, 1000, 1444, 1447, 1579
Bme1390I CCNGG 3 cut(s) 288, 334, 566
BmgBI CACGTC 1 cut(s) 1270
BmgT120I GGNCC 1 cut(s) 1549
BmiI GGNNCC 6 cut(s) 36, 56, 154, 806, 1370, 1386
BmrFI CCNGG 3 cut(s) 288, 334, 566
BmrI ACTGGG 2 cut(s) 381, 788
BmsI GCATC 5 cut(s) 313, 529, 823, 916, 964
BmuI ACTGGG 2 cut(s) 381, 788
BpiI GAAGAC 1 cut(s) 820
BpmI CTGGAG 1 cut(s) 971
Bpu10I CCTNAGC 1 cut(s) 963
BpuEI CTTGAG 1 cut(s) 320
BsaBI GATNNNNATC 1 cut(s) 1332
BsaHI GRCGYC 1 cut(s) 1555
BsaI GGTCTC 2 cut(s) 650, 1623
BsaJI CCNNGG 4 cut(s) 286, 653, 1160, 1558
BsaWI WCCGGW 1 cut(s) 1403
BsaXI ACNNNNNCTCC 6 cut(s) 84, 114, 820, 850, 1352, 1382
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 162, 163, 293, 317, 596, 1590
Bse1I ACTGG 2 cut(s) 376, 794
Bse8I GATNNNNATC 1 cut(s) 1332
BseAI TCCGGA 1 cut(s) 1403
BseBI CCWGG 3 cut(s) 288, 334, 566
BseDI CCNNGG 4 cut(s) 286, 653, 1160, 1558
BseGI GGATG 4 cut(s) 18, 183, 712, 1093
BseJI GATNNNNATC 1 cut(s) 1332
BseLI CCNNNNNNNGG 7 cut(s) 31, 162, 163, 293, 317, 596, 1590
BseMII CTCAG 2 cut(s) 675, 954
BseNI ACTGG 2 cut(s) 376, 794
BseRI GAGGAG 3 cut(s) 716, 999, 1422
BseXI GCAGC 5 cut(s) 316, 355, 985, 1432, 1589
BsgI GTGCAG 1 cut(s) 1596
BshFI GGCC 2 cut(s) 184, 1550
BshNI GGYRCC 3 cut(s) 54, 152, 804
BsiHKAI GWGCWC 3 cut(s) 52, 991, 1498
BsiSI CCGG 2 cut(s) 1273, 1404
BslFI GGGAC 3 cut(s) 134, 179, 268
BslI CCNNNNNNNGG 7 cut(s) 31, 162, 163, 293, 317, 596, 1590
BsmAI GTCTC 6 cut(s) 492, 569, 650, 1009, 1215, 1623
BsmFI GGGAC 3 cut(s) 134, 179, 268
BsmI GAATGC 2 cut(s) 1249, 1285
BsnI GGCC 2 cut(s) 184, 1550
Bso31I GGTCTC 2 cut(s) 650, 1623
Bsp1286I GDGCHC 4 cut(s) 52, 67, 991, 1498
Bsp13I TCCGGA 1 cut(s) 1403
Bsp143I GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
Bsp19I CCATGG 2 cut(s) 653, 1160
BspACI CCGC 8 cut(s) 271, 391, 431, 475, 790, 1240, 1276, 1443
BspANI GGCC 2 cut(s) 184, 1550
BspCNI CTCAG 2 cut(s) 674, 955
BspEI TCCGGA 1 cut(s) 1403
BspHI TCATGA 1 cut(s) 490
BspLI GGNNCC 6 cut(s) 36, 56, 154, 806, 1370, 1386
BspMAI CTGCAG 1 cut(s) 766
BspMI ACCTGC 2 cut(s) 46, 561
BspPI GGATC 3 cut(s) 577, 623, 1258
BspQI GCTCTTC 1 cut(s) 193
BspT107I GGYRCC 3 cut(s) 54, 152, 804
BspTI CTTAAG 1 cut(s) 976
BspTNI GGTCTC 2 cut(s) 650, 1623
BsrI ACTGG 2 cut(s) 376, 794
BssECI CCNNGG 4 cut(s) 286, 653, 1160, 1558
BssMI GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
BssNI GRCGYC 1 cut(s) 1555
BssSI CACGAG 1 cut(s) 1478
BssT1I CCWWGG 2 cut(s) 653, 1160
Bst2BI CACGAG 1 cut(s) 1478
Bst2UI CCWGG 3 cut(s) 288, 334, 566
Bst4CI ACNGT 3 cut(s) 125, 212, 1562
Bst6I CTCTTC 3 cut(s) 193, 1224, 1507
BstACI GRCGYC 1 cut(s) 1555
BstAFI CTTAAG 1 cut(s) 976
BstAPI GCANNNNNTGC 2 cut(s) 47, 995
BstC8I GCNNGC 1 cut(s) 639
BstDEI CTNAG 3 cut(s) 661, 963, 1066
BstDSI CCRYGG 3 cut(s) 653, 1160, 1558
BstF5I GGATG 4 cut(s) 18, 183, 712, 1093
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 2 cut(s) 348, 605
BstKTI GATC 7 cut(s) 97, 148, 585, 631, 1266, 1336, 1546
BstMAI GTCTC 6 cut(s) 492, 569, 650, 1009, 1215, 1623
BstMBI GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
BstMWI GCNNNNNNNGC 3 cut(s) 47, 995, 1577
BstNI CCWGG 3 cut(s) 288, 334, 566
BstNSI RCATGY 3 cut(s) 48, 115, 641
BstSCI CCNGG 3 cut(s) 286, 332, 564
BstSFI CTRYAG 3 cut(s) 312, 546, 762
BstV1I GCAGC 5 cut(s) 316, 355, 985, 1432, 1589
BstV2I GAAGAC 1 cut(s) 820
BstX2I RGATCY 3 cut(s) 94, 145, 1263
BstXI CCANNNNNNTGG 2 cut(s) 801, 846
BstYI RGATCY 3 cut(s) 94, 145, 1263
BsuI GTATCC 1 cut(s) 562
BsuRI GGCC 2 cut(s) 184, 1550
BtgI CCRYGG 3 cut(s) 653, 1160, 1558
BtrI CACGTC 1 cut(s) 1270
BtsCI GGATG 4 cut(s) 18, 183, 712, 1093
BtsIMutI CAGTG 1 cut(s) 1104
BveI ACCTGC 2 cut(s) 46, 561
Cac8I GCNNGC 1 cut(s) 639
CaiI CAGNNNCTG 1 cut(s) 911
CciI TCATGA 1 cut(s) 490
CfoI GCGC 2 cut(s) 348, 605
Cfr13I GGNCC 1 cut(s) 1549
CseI GACGC 2 cut(s) 677, 1563
Csp6I GTAC 6 cut(s) 136, 153, 208, 360, 478, 1170
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviQI GTAC 6 cut(s) 136, 153, 208, 360, 478, 1170
DdeI CTNAG 3 cut(s) 661, 963, 1066
DpnI GATC 7 cut(s) 96, 147, 584, 630, 1265, 1335, 1545
DpnII GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
DrdI GACNNNNNNGTC 1 cut(s) 1560
DseDI GACNNNNNNGTC 1 cut(s) 1560
Eam1104I CTCTTC 3 cut(s) 193, 1224, 1507
EarI CTCTTC 3 cut(s) 193, 1224, 1507
EciI GGCGGA 1 cut(s) 1291
Ecl136II GAGCTC 1 cut(s) 1496
Eco130I CCWWGG 2 cut(s) 653, 1160
Eco24I GRGCYC 2 cut(s) 67, 1498
Eco31I GGTCTC 2 cut(s) 650, 1623
Eco32I GATATC 2 cut(s) 339, 877
Eco47III AGCGCT 1 cut(s) 604
Eco53kI GAGCTC 1 cut(s) 1496
Eco57I CTGAAG 3 cut(s) 693, 1128, 1341
EcoICRI GAGCTC 1 cut(s) 1496
EcoRI GAATTC 2 cut(s) 865, 1177
EcoRII CCWGG 3 cut(s) 286, 332, 564
EcoRV GATATC 2 cut(s) 339, 877
EcoT14I CCWWGG 2 cut(s) 653, 1160
EcoT22I ATGCAT 1 cut(s) 639
EcoT38I GRGCYC 2 cut(s) 67, 1498
ErhI CCWWGG 2 cut(s) 653, 1160
FalI AAGNNNNNCTT 2 cut(s) 1076, 1108
FaqI GGGAC 3 cut(s) 134, 179, 268
FauI CCCGC 1 cut(s) 384
FauNDI CATATG 1 cut(s) 255
FbaI TGATCA 1 cut(s) 1543
FblI GTMKAC 1 cut(s) 549
Fnu4HI GCNGC 7 cut(s) 272, 330, 344, 999, 1443, 1446, 1578
FokI GGATG 4 cut(s) 25, 190, 719, 1100
FriOI GRGCYC 2 cut(s) 67, 1498
Fsp4HI GCNGC 7 cut(s) 272, 330, 344, 999, 1443, 1446, 1578
FspBI CTAG 5 cut(s) 189, 204, 378, 1284, 1353
GlaI GCGC 2 cut(s) 347, 604
GluI GCNGC 7 cut(s) 272, 330, 344, 999, 1443, 1446, 1578
GsuI CTGGAG 1 cut(s) 971
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 2 cut(s) 184, 1550
HapII CCGG 2 cut(s) 1273, 1404
HgaI GACGC 2 cut(s) 677, 1563
HhaI GCGC 2 cut(s) 348, 605
Hin1I GRCGYC 1 cut(s) 1555
Hin6I GCGC 2 cut(s) 346, 603
HinP1I GCGC 2 cut(s) 346, 603
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HpaII CCGG 2 cut(s) 1273, 1404
HphI GGTGA 5 cut(s) 63, 332, 542, 926, 1133
Hpy166II GTNNAC 3 cut(s) 229, 550, 1172
Hpy188I TCNGA 5 cut(s) 220, 403, 538, 664, 1628
Hpy188III TCNNGA 5 cut(s) 378, 491, 923, 1093, 1404
Hpy8I GTNNAC 3 cut(s) 229, 550, 1172
Hpy99I CGWCG 1 cut(s) 1557
HpyAV CCTTC 2 cut(s) 855, 1155
HpyCH4III ACNGT 3 cut(s) 125, 212, 1562
HpyCH4IV ACGT 1 cut(s) 1269
HpyCH4V TGCA 8 cut(s) 41, 556, 637, 764, 929, 1076, 1083, 1577
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 995, 1577
HpyF3I CTNAG 3 cut(s) 661, 963, 1066
HpySE526I ACGT 1 cut(s) 1269
Hsp92I GRCGYC 1 cut(s) 1555
HspAI GCGC 2 cut(s) 346, 603
Kpn2I TCCGGA 1 cut(s) 1403
KpnI GGTACC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 1543
Kzo9I GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
LguI GCTCTTC 1 cut(s) 193
LmnI GCTCC 7 cut(s) 841, 952, 986, 1360, 1453, 1493, 1501
Lsp1109I GCAGC 5 cut(s) 316, 355, 985, 1432, 1589
LweI GCATC 5 cut(s) 313, 529, 823, 916, 964
MaeI CTAG 5 cut(s) 189, 204, 378, 1284, 1353
MaeII ACGT 1 cut(s) 1269
MaeIII GTNAC 3 cut(s) 100, 901, 1196
MalI GATC 7 cut(s) 96, 147, 584, 630, 1265, 1335, 1545
MboI GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
MfeI CAATTG 3 cut(s) 87, 799, 1452
MflI RGATCY 3 cut(s) 94, 145, 1263
MhlI GDGCHC 4 cut(s) 52, 67, 991, 1498
MluCI AATT 9 cut(s) 87, 128, 772, 799, 865, 944, 1077, 1177, 1452
MlyI GAGTC 5 cut(s) 92, 161, 230, 746, 1385
MmeI TCCRAC 1 cut(s) 610
Mph1103I ATGCAT 1 cut(s) 639
MroI TCCGGA 1 cut(s) 1403
MroXI GAANNNNTTC 1 cut(s) 865
MseI TTAA 2 cut(s) 261, 977
MslI CAYNNNNRTG 1 cut(s) 1109
MspA1I CMGCKG 1 cut(s) 1445
MspCI CTTAAG 1 cut(s) 976
MspI CCGG 2 cut(s) 1273, 1404
MspR9I CCNGG 3 cut(s) 288, 334, 566
MunI CAATTG 3 cut(s) 87, 799, 1452
Mva1269I GAATGC 2 cut(s) 1249, 1285
MvaI CCWGG 3 cut(s) 288, 334, 566
MwoI GCNNNNNNNGC 3 cut(s) 47, 995, 1577
NcoI CCATGG 2 cut(s) 653, 1160
NdeI CATATG 1 cut(s) 255
NdeII GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
NlaIV GGNNCC 6 cut(s) 36, 56, 154, 806, 1370, 1386
NsiI ATGCAT 1 cut(s) 639
NspI RCATGY 3 cut(s) 48, 115, 641
OliI CACNNNNGTG 1 cut(s) 1109
PaeI GCATGC 1 cut(s) 641
PagI TCATGA 1 cut(s) 490
PciI ACATGT 2 cut(s) 44, 111
PciSI GCTCTTC 1 cut(s) 193
PctI GAATGC 2 cut(s) 1249, 1285
PdmI GAANNNNTTC 1 cut(s) 865
PfeI GAWTC 7 cut(s) 323, 434, 455, 533, 758, 908, 1114
PflMI CCANNNNNTGG 2 cut(s) 31, 596
PfoI TCCNGGA 1 cut(s) 564
PkrI GCNGC 7 cut(s) 273, 331, 345, 1000, 1444, 1447, 1579
PleI GAGTC 5 cut(s) 91, 161, 229, 745, 1385
PpsI GAGTC 5 cut(s) 91, 161, 229, 745, 1385
PscI ACATGT 2 cut(s) 44, 111
PshBI ATTAAT 1 cut(s) 261
PsiI TTATAA 1 cut(s) 1311
Psp124BI GAGCTC 1 cut(s) 1498
Psp6I CCWGG 3 cut(s) 286, 332, 564
PspGI CCWGG 3 cut(s) 286, 332, 564
PspN4I GGNNCC 6 cut(s) 36, 56, 154, 806, 1370, 1386
PspPI GGNCC 1 cut(s) 1549
PstI CTGCAG 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 911
PsuI RGATCY 3 cut(s) 94, 145, 1263
RsaI GTAC 6 cut(s) 137, 154, 209, 361, 479, 1171
RsaNI GTAC 6 cut(s) 136, 153, 208, 360, 478, 1170
RseI CAYNNNNRTG 1 cut(s) 1109
SacI GAGCTC 1 cut(s) 1498
SapI GCTCTTC 1 cut(s) 193
SaqAI TTAA 2 cut(s) 261, 977
SatI GCNGC 7 cut(s) 272, 330, 344, 999, 1443, 1446, 1578
Sau3AI GATC 7 cut(s) 94, 145, 582, 628, 1263, 1333, 1543
Sau96I GGNCC 1 cut(s) 1549
SchI GAGTC 5 cut(s) 92, 161, 230, 746, 1385
ScrFI CCNGG 3 cut(s) 288, 334, 566
SduI GDGCHC 4 cut(s) 52, 67, 991, 1498
SfaNI GCATC 5 cut(s) 313, 529, 823, 916, 964
SfcI CTRYAG 3 cut(s) 312, 546, 762
SmiMI CAYNNNNRTG 1 cut(s) 1109
SmlI CTYRAG 2 cut(s) 299, 976
SmoI CTYRAG 2 cut(s) 299, 976
SphI GCATGC 1 cut(s) 641
Sse9I AATT 9 cut(s) 87, 128, 772, 799, 865, 944, 1077, 1177, 1452
SsiI CCGC 8 cut(s) 271, 391, 431, 475, 790, 1240, 1276, 1443
SspMI CTAG 5 cut(s) 189, 204, 378, 1284, 1353
SstI GAGCTC 1 cut(s) 1498
StyD4I CCNGG 3 cut(s) 286, 332, 564
StyI CCWWGG 2 cut(s) 653, 1160
TaaI ACNGT 3 cut(s) 125, 212, 1562
TaiI ACGT 1 cut(s) 1272
TaqI TCGA 2 cut(s) 423, 891
TasI AATT 9 cut(s) 87, 128, 772, 799, 865, 944, 1077, 1177, 1452
TatI WGTACW 2 cut(s) 135, 1169
TauI GCSGC 2 cut(s) 274, 1445
TfiI GAWTC 7 cut(s) 323, 434, 455, 533, 758, 908, 1114
Tru1I TTAA 2 cut(s) 261, 977
Tru9I TTAA 2 cut(s) 261, 977
TscAI CASTG 1 cut(s) 1111
TseI GCWGC 5 cut(s) 329, 343, 998, 1445, 1577
TspDTI ATGAA 4 cut(s) 723, 735, 833, 1344
TspGWI ACGGA 1 cut(s) 1189
TspRI CASTG 1 cut(s) 1111
Van91I CCANNNNNTGG 2 cut(s) 31, 596
Vha464I CTTAAG 1 cut(s) 976
VspI ATTAAT 1 cut(s) 261
XapI RAATTY 3 cut(s) 128, 865, 1177
XbaI TCTAGA 1 cut(s) 377
XceI RCATGY 3 cut(s) 48, 115, 641
XcmI CCANNNNNNNNNTGG 1 cut(s) 593
XmiI GTMKAC 1 cut(s) 549
XmnI GAANNNNTTC 1 cut(s) 865
XspI CTAG 5 cut(s) 189, 204, 378, 1284, 1353
Zsp2I ATGCAT 1 cut(s) 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.