Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000640.1

Orthogroup ID

OG0004276

Physical Location & Seq

Genomic Coordinates Reverse (-)

28516 .. 31171

Gene Structure 2656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

atgggacctagatggaaaggaaaggatgcaaaagctaaagctcttgcagatcccatgtcaagtatagtattgcagcttcagtcttctctagtccaatcagatgcccaaggattcttgtgtgggtgcaatgtacttcttgaagcaggaccaaagcaaactgatctccttcttcgtgcctgcttaggcgaacccataaaaaacttgtctggtgaacccattatcaacaaaaacaataagcattggttttactttggcatggaggagacattcttcctatgcaattctctaaaatgcctcaagatacttgatggtttagataactgcccaaagaatgatcaagaacttttccagtacgtgaaatctaagaaaacaacattccccgattcttacaaggcttattctcatcttcggctgaaaaattgggttgtgatgtacgattccaattactgtgcagactttgttgcctaccgccaccatccctctctggtccattctgaatttgttgtgattctgttatcagaaggagatagcgaggcaaatgatcgattgagggtgtggtctgatgtccgtggcaccaaaaggatgtgtaaagttattaagaaggcattgctagttctaagcgttgataaaaatggtcatgatgctacctctccatcatgtttgaaaggatacacagttacagagcacactatttcgagatggagtccggaacaatgccatgaggatcaccctaaagatgtttgggaaccaagtagcagttctgtgccattaatgcctagcggaaccacattaaggtctaaagtggctttagccccacggctagtttctctcgatcaaatattcaaggctttggttattttcttttggaatatcttacccgcctcacgcctagcagacctgcatcaccagcccagtcgctatcctccacccacctgcagtgcctccgcgccagcagcacgatcgatctttcaatccagcctccgcgcgcacagcctagcctccgacccttgtagcaatgcctccgacccggccctgcatcagcgcctccgacccagccttgctgcctctcatctgcaacccaccggcagatccctgcaacctaacaacgatcgcagcaccgatcgatcccgacctccagtccaccgtcgctccccattgtcgcaacaaccaccgatcgcaaacgacgtaacagccccgccccgccctccccgacctctagaccagtccgcccctaaaccagaaggaaggaaagccggaggaggaagaagaaggaaaaaaaaaaaaaaaaggggcaactcgggccgaagtaaggacccggcccggaaagaaaaaaagggcccaaagaacagaaggccctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000213 GO:0000214 GO:0000278 GO:0000281 GO:0000379 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016892 GO:0016894 GO:0022402 GO:0022414 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0061640 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:0140101 GO:1901360 GO:1902494 GO:1902555 GO:1903047 GO:1905348

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_int_endo tRNA_int_endo_N

Protein Analysis

452

Amino Acids

50.44

Weight (kDa)

9.82

Isoelectric Point (pI)

67.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_int_endo	PF01974	126 - 212	1.5e-12	tRNA intron endonuclease, catalytic C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004276)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38890
fragaria_vesca	FvH4_6g01503 FvH4_6g01503 FvH4_6g01503 FvH4_6g01503 FvH4_6g01510
malus_domestica	MD11G1123700.v1.1 MD11G1124300.v1.1 MD12G1250600.v1.1
prunus_persica	Prupe.6G093000_v2.0.a1 Prupe.6G093000_v2.0.a1 Prupe.6G352700_v2.0.a1 Prupe.6G352700_v2.0.a1
pyrus_communis	pycom11g10450 pycom12g23060
rosa_chinensis	RchiOBHm_Chr3g0449171 RchiOBHm_Chr3g0449181 RchiOBHm_Chr5g0061031
rosa_laevigata	RLG00000035421
rosa_multiflora	Rmu_co8387241.1_g000001 Rmu_sc0000640.1_g000004 Rmu_sc0004874.1_g000009 Rmu_sc0006661.1_g000007
rosa_roxburghii	Rroxscaffold_1G00019610 Rroxscaffold_6G00427230
rosa_rugosa	Rorug02G0618600 Rorug05G0336200
rosa_samantha	Rh1AG412000 Rh3AG016900
rosa_wichuraiana	Rw3G001270 Rw3G001280 Rw5G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	941
Acc36I	ACCTGC	2 cut(s)	906, 941
AccB1I	GGYRCC	1 cut(s)	572
AccII	CGCG	3 cut(s)	947, 984, 986
AccIII	TCCGGA	1 cut(s)	706
AciI	CCGC	8 cut(s)	469, 780, 879, 945, 982, 1196, 1201, 1227
AclWI	GGATC	4 cut(s)	44, 732, 1083, 1119
AcsI	RAATTY	1 cut(s)	497
AcuI	CTGAAG	1 cut(s)	62
AfaI	GTAC	3 cut(s)	132, 353, 434
AfiI	CCNNNNNNNGG	2 cut(s)	792, 1309
AgsI	TTSAA	4 cut(s)	140, 664, 844, 971
AhdI	GACNNNNNGTC	1 cut(s)	1136
AjuI	GAANNNNNNNTTGG	2 cut(s)	742, 774
AluBI	AGCT	3 cut(s)	35, 41, 76
AluI	AGCT	3 cut(s)	35, 41, 76
Alw21I	GWGCWC	1 cut(s)	687
Alw26I	GTCTC	1 cut(s)	257
AlwI	GGATC	4 cut(s)	44, 732, 1083, 1119
Ama87I	CYCGRG	1 cut(s)	1297
Aor13HI	TCCGGA	1 cut(s)	706
AoxI	GGCC	5 cut(s)	1029, 1300, 1317, 1336, 1352
ApaI	GGGCCC	1 cut(s)	1340
ApeKI	GCWGC	4 cut(s)	73, 953, 1061, 1113
ApoI	RAATTY	1 cut(s)	497
AseI	ATTAAT	1 cut(s)	770
AspLEI	GCGC	4 cut(s)	949, 986, 988, 1044
AsuC2I	CCSGG	3 cut(s)	1028, 1316, 1321
AsuHPI	GGTGA	3 cut(s)	221, 719, 896
AvaI	CYCGRG	1 cut(s)	1297
AvaII	GGWCC	4 cut(s)	5, 146, 487, 1312
BaeGI	GKGCMC	1 cut(s)	1340
BanI	GGYRCC	1 cut(s)	572
BanII	GRGCYC	1 cut(s)	1340
BarI	GAAGNNNNNNTAC	2 cut(s)	60, 92
BbsI	GAAGAC	1 cut(s)	75
Bbv12I	GWGCWC	1 cut(s)	687
BbvI	GCAGC	4 cut(s)	85, 965, 1048, 1125
BccI	CCATC	5 cut(s)	6, 302, 483, 661, 693
BceAI	ACGGC	1 cut(s)	833
BcgI	CGANNNNNNTGC	2 cut(s)	942, 976
BciVI	GTATCC	1 cut(s)	662
BclI	TGATCA	1 cut(s)	334
BcnI	CCSGG	3 cut(s)	1028, 1316, 1321
BcoDI	GTCTC	1 cut(s)	257
BfaI	CTAG	8 cut(s)	9, 89, 611, 777, 821, 890, 995, 1217
BfmI	CTRYAG	1 cut(s)	934
BfoI	RGCGCY	1 cut(s)	1045
BfuAI	ACCTGC	2 cut(s)	906, 941
BfuI	GTATCC	1 cut(s)	662
BisI	GCNGC	4 cut(s)	74, 954, 1062, 1114
BlsI	GCNGC	4 cut(s)	75, 955, 1063, 1115
Bme1390I	CCNGG	3 cut(s)	1028, 1316, 1321
Bme18I	GGWCC	4 cut(s)	5, 146, 487, 1312
BmeRI	GACNNNNNGTC	1 cut(s)	1136
BmeT110I	CYCGRG	1 cut(s)	1297
BmiI	GGNNCC	6 cut(s)	6, 574, 747, 784, 1314, 1338
BmrFI	CCNGG	3 cut(s)	1028, 1316, 1321
BmrI	ACTGGG	1 cut(s)	906
BmsI	GCATC	5 cut(s)	16, 91, 631, 910, 1045
BmuI	ACTGGG	1 cut(s)	906
BpiI	GAAGAC	1 cut(s)	75
BpmI	CTGGAG	1 cut(s)	1119
Bpu10I	CCTNAGC	1 cut(s)	181
BpuEI	CTTGAG	1 cut(s)	281
BpuMI	CCSGG	3 cut(s)	1028, 1316, 1321
Bsa29I	ATCGAT	3 cut(s)	544, 962, 1123
BsaAI	YACGTR	1 cut(s)	355
BsaJI	CCNNGG	3 cut(s)	106, 568, 815
BsaWI	WCCGGW	1 cut(s)	706
BsaXI	ACNNNNNCTCC	2 cut(s)	1133, 1163
Bsc4I	CCNNNNNNNGG	2 cut(s)	792, 1309
Bse118I	RCCGGY	1 cut(s)	1082
Bse1I	ACTGG	4 cut(s)	349, 912, 1136, 1222
Bse3DI	GCAATG	3 cut(s)	133, 605, 1021
BseAI	TCCGGA	1 cut(s)	706
BseCI	ATCGAT	3 cut(s)	544, 962, 1123
BseDI	CCNNGG	3 cut(s)	106, 568, 815
BseGI	GGATG	3 cut(s)	31, 475, 588
BseLI	CCNNNNNNNGG	2 cut(s)	792, 1309
BseMI	GCAATG	3 cut(s)	133, 605, 1021
BseNI	ACTGG	4 cut(s)	349, 912, 1136, 1222
BsePI	GCGCGC	1 cut(s)	984
BseRI	GAGGAG	2 cut(s)	275, 1272
BseSI	GKGCMC	1 cut(s)	1340
BseXI	GCAGC	4 cut(s)	85, 965, 1048, 1125
BseYI	CCCAGC	1 cut(s)	1052
BsgI	GTGCAG	1 cut(s)	471
Bsh1236I	CGCG	3 cut(s)	947, 984, 986
Bsh1285I	CGRYCG	4 cut(s)	962, 1111, 1123, 1176
BshFI	GGCC	5 cut(s)	1031, 1302, 1319, 1338, 1354
BshNI	GGYRCC	1 cut(s)	572
BshVI	ATCGAT	3 cut(s)	544, 962, 1123
BsiEI	CGRYCG	4 cut(s)	962, 1111, 1123, 1176
BsiHKAI	GWGCWC	1 cut(s)	687
BsiHKCI	CYCGRG	1 cut(s)	1297
BsiSI	CCGG	6 cut(s)	707, 1028, 1083, 1254, 1316, 1321
BslFI	GGGAC	1 cut(s)	18
BslI	CCNNNNNNNGG	2 cut(s)	792, 1309
BsmAI	GTCTC	1 cut(s)	257
BsmFI	GGGAC	1 cut(s)	18
BsnI	GGCC	5 cut(s)	1031, 1302, 1319, 1338, 1354
BsoBI	CYCGRG	1 cut(s)	1297
Bsp120I	GGGCCC	1 cut(s)	1336
Bsp1286I	GDGCHC	2 cut(s)	687, 1340
Bsp13I	TCCGGA	1 cut(s)	706
BspACI	CCGC	8 cut(s)	469, 780, 879, 945, 982, 1196, 1201, 1227
BspANI	GGCC	5 cut(s)	1031, 1302, 1319, 1338, 1354
BspDI	ATCGAT	3 cut(s)	544, 962, 1123
BspEI	TCCGGA	1 cut(s)	706
BspFNI	CGCG	3 cut(s)	947, 984, 986
BspHI	TCATGA	1 cut(s)	637
BspLI	GGNNCC	6 cut(s)	6, 574, 747, 784, 1314, 1338
BspMAI	CTGCAG	1 cut(s)	938
BspMI	ACCTGC	2 cut(s)	906, 941
BspPI	GGATC	4 cut(s)	44, 732, 1083, 1119
BspT107I	GGYRCC	1 cut(s)	572
BsrDI	GCAATG	3 cut(s)	133, 605, 1021
BsrFI	RCCGGY	1 cut(s)	1082
BsrI	ACTGG	4 cut(s)	349, 912, 1136, 1222
BssAI	RCCGGY	1 cut(s)	1082
BssECI	CCNNGG	3 cut(s)	106, 568, 815
BssHII	GCGCGC	1 cut(s)	984
BssT1I	CCWWGG	1 cut(s)	106
Bst4CI	ACNGT	3 cut(s)	449, 676, 1145
BstBAI	YACGTR	1 cut(s)	355
BstC8I	GCNNGC	3 cut(s)	178, 951, 986
BstDEI	CTNAG	3 cut(s)	181, 363, 617
BstDSI	CCRYGG	2 cut(s)	568, 815
BstF5I	GGATG	3 cut(s)	31, 475, 588
BstFNI	CGCG	3 cut(s)	947, 984, 986
BstH2I	RGCGCY	1 cut(s)	1045
BstHHI	GCGC	4 cut(s)	949, 986, 988, 1044
BstMAI	GTCTC	1 cut(s)	257
BstMCI	CGRYCG	4 cut(s)	962, 1111, 1123, 1176
BstMWI	GCNNNNNNNGC	5 cut(s)	772, 907, 953, 990, 1299
BstSCI	CCNGG	3 cut(s)	1026, 1314, 1319
BstSFI	CTRYAG	1 cut(s)	934
BstSLI	GKGCMC	1 cut(s)	1340
BstUI	CGCG	3 cut(s)	947, 984, 986
BstV1I	GCAGC	4 cut(s)	85, 965, 1048, 1125
BstV2I	GAAGAC	1 cut(s)	75
BstX2I	RGATCY	2 cut(s)	49, 1088
BstYI	RGATCY	2 cut(s)	49, 1088
Bsu15I	ATCGAT	3 cut(s)	544, 962, 1123
BsuI	GTATCC	1 cut(s)	662
BsuRI	GGCC	5 cut(s)	1031, 1302, 1319, 1338, 1354
BsuTUI	ATCGAT	3 cut(s)	544, 962, 1123
BtgI	CCRYGG	2 cut(s)	568, 815
BtsCI	GGATG	3 cut(s)	31, 475, 588
BtsI	GCAGTG	1 cut(s)	943
BtsIMutI	CAGTG	1 cut(s)	943
BveI	ACCTGC	2 cut(s)	906, 941
Cac8I	GCNNGC	3 cut(s)	178, 951, 986
CciI	TCATGA	1 cut(s)	637
CfoI	GCGC	4 cut(s)	949, 986, 988, 1044
Cfr10I	RCCGGY	1 cut(s)	1082
ClaI	ATCGAT	3 cut(s)	544, 962, 1123
Csp6I	GTAC	3 cut(s)	131, 352, 433
CviAII	CATG	5 cut(s)	55, 256, 638, 657, 719
CviQI	GTAC	3 cut(s)	131, 352, 433
DdeI	CTNAG	3 cut(s)	181, 363, 617
DriI	GACNNNNNGTC	1 cut(s)	1136
Eam1105I	GACNNNNNGTC	1 cut(s)	1136
EciI	GGCGGA	1 cut(s)	1216
Eco130I	CCWWGG	1 cut(s)	106
Eco24I	GRGCYC	1 cut(s)	1340
Eco47I	GGWCC	4 cut(s)	5, 146, 487, 1312
Eco57I	CTGAAG	1 cut(s)	62
Eco88I	CYCGRG	1 cut(s)	1297
EcoO109I	RGGNCCY	4 cut(s)	5, 1312, 1336, 1353
EcoT14I	CCWWGG	1 cut(s)	106
EcoT38I	GRGCYC	1 cut(s)	1340
ErhI	CCWWGG	1 cut(s)	106
FaeI	CATG	5 cut(s)	58, 259, 641, 660, 722
FaiI	YATR	8 cut(s)	56, 65, 194, 257, 277, 639, 658, 720
FaqI	GGGAC	1 cut(s)	18
FatI	CATG	5 cut(s)	54, 255, 637, 656, 718
FauI	CCCGC	3 cut(s)	886, 1203, 1208
FbaI	TGATCA	1 cut(s)	334
Fnu4HI	GCNGC	4 cut(s)	74, 954, 1062, 1114
FokI	GGATG	3 cut(s)	38, 462, 595
FriOI	GRGCYC	1 cut(s)	1340
Fsp4HI	GCNGC	4 cut(s)	74, 954, 1062, 1114
FspBI	CTAG	8 cut(s)	9, 89, 611, 777, 821, 890, 995, 1217
GlaI	GCGC	4 cut(s)	948, 985, 987, 1043
GluI	GCNGC	4 cut(s)	74, 954, 1062, 1114
GsaI	CCCAGC	1 cut(s)	1056
GsuI	CTGGAG	1 cut(s)	1119
HaeII	RGCGCY	1 cut(s)	1045
HaeIII	GGCC	5 cut(s)	1031, 1302, 1319, 1338, 1354
HapII	CCGG	6 cut(s)	707, 1028, 1083, 1254, 1316, 1321
HhaI	GCGC	4 cut(s)	949, 986, 988, 1044
Hin1II	CATG	5 cut(s)	58, 259, 641, 660, 722
Hin6I	GCGC	4 cut(s)	947, 984, 986, 1042
HinP1I	GCGC	4 cut(s)	947, 984, 986, 1042
HinfI	GANTC	5 cut(s)	111, 383, 437, 508, 703
HpaII	CCGG	6 cut(s)	707, 1028, 1083, 1254, 1316, 1321
HphI	GGTGA	3 cut(s)	221, 719, 896
Hpy166II	GTNNAC	2 cut(s)	212, 1141
Hpy188I	TCNGA	7 cut(s)	100, 496, 520, 562, 1003, 1024, 1049
Hpy188III	TCNNGA	9 cut(s)	137, 298, 338, 638, 696, 707, 830, 1128, 1217
Hpy8I	GTNNAC	2 cut(s)	212, 1141
Hpy99I	CGWCG	2 cut(s)	1149, 1187
HpyAV	CCTTC	7 cut(s)	176, 515, 595, 1235, 1239, 1263, 1344
HpyCH4III	ACNGT	3 cut(s)	449, 676, 1145
HpyCH4IV	ACGT	2 cut(s)	354, 1185
HpyF10VI	GCNNNNNNNGC	5 cut(s)	772, 907, 953, 990, 1299
HpyF3I	CTNAG	3 cut(s)	181, 363, 617
HpySE526I	ACGT	2 cut(s)	354, 1185
Hsp92II	CATG	5 cut(s)	58, 259, 641, 660, 722
HspAI	GCGC	4 cut(s)	947, 984, 986, 1042
Kpn2I	TCCGGA	1 cut(s)	706
Ksp22I	TGATCA	1 cut(s)	334
LmnI	GCTCC	1 cut(s)	1154
Lsp1109I	GCAGC	4 cut(s)	85, 965, 1048, 1125
LweI	GCATC	5 cut(s)	16, 91, 631, 910, 1045
MaeI	CTAG	8 cut(s)	9, 89, 611, 777, 821, 890, 995, 1217
MaeII	ACGT	2 cut(s)	354, 1185
MaeIII	GTNAC	2 cut(s)	676, 1186
MboII	GAAGA	6 cut(s)	75, 161, 262, 398, 1275, 1278
MflI	RGATCY	2 cut(s)	49, 1088
MhlI	GDGCHC	2 cut(s)	687, 1340
MluCI	AATT	4 cut(s)	280, 418, 442, 497
MlyI	GAGTC	1 cut(s)	712
MmeI	TCCRAC	3 cut(s)	1026, 1047, 1072
MroI	TCCGGA	1 cut(s)	706
MseI	TTAA	3 cut(s)	597, 770, 791
MspI	CCGG	6 cut(s)	707, 1028, 1083, 1254, 1316, 1321
MspR9I	CCNGG	3 cut(s)	1028, 1316, 1321
MvnI	CGCG	3 cut(s)	947, 984, 986
MwoI	GCNNNNNNNGC	5 cut(s)	772, 907, 953, 990, 1299
NciI	CCSGG	3 cut(s)	1028, 1316, 1321
NlaIII	CATG	5 cut(s)	58, 259, 641, 660, 722
NlaIV	GGNNCC	6 cut(s)	6, 574, 747, 784, 1314, 1338
PagI	TCATGA	1 cut(s)	637
PaqCI	CACCTGC	1 cut(s)	941
PauI	GCGCGC	1 cut(s)	984
PcsI	WCGNNNNNNNCGW	1 cut(s)	1182
PfeI	GAWTC	4 cut(s)	111, 383, 437, 508
PkrI	GCNGC	4 cut(s)	75, 955, 1063, 1115
Ple19I	CGATCG	4 cut(s)	962, 1111, 1123, 1176
PleI	GAGTC	1 cut(s)	711
PpsI	GAGTC	1 cut(s)	711
Ppu21I	YACGTR	1 cut(s)	355
PpuMI	RGGWCCY	2 cut(s)	5, 1312
PshBI	ATTAAT	1 cut(s)	770
Psp5II	RGGWCCY	2 cut(s)	5, 1312
PspFI	CCCAGC	1 cut(s)	1052
PspN4I	GGNNCC	6 cut(s)	6, 574, 747, 784, 1314, 1338
PspOMI	GGGCCC	1 cut(s)	1336
PspPPI	RGGWCCY	2 cut(s)	5, 1312
PstI	CTGCAG	1 cut(s)	938
PsuI	RGATCY	2 cut(s)	49, 1088
PteI	GCGCGC	1 cut(s)	984
PvuI	CGATCG	4 cut(s)	962, 1111, 1123, 1176
RsaI	GTAC	3 cut(s)	132, 353, 434
RsaNI	GTAC	3 cut(s)	131, 352, 433
SaqAI	TTAA	3 cut(s)	597, 770, 791
SatI	GCNGC	4 cut(s)	74, 954, 1062, 1114
SchI	GAGTC	1 cut(s)	712
ScrFI	CCNGG	3 cut(s)	1028, 1316, 1321
SduI	GDGCHC	2 cut(s)	687, 1340
SfaNI	GCATC	5 cut(s)	16, 91, 631, 910, 1045
SfcI	CTRYAG	1 cut(s)	934
SinI	GGWCC	4 cut(s)	5, 146, 487, 1312
SmlI	CTYRAG	1 cut(s)	296
SmoI	CTYRAG	1 cut(s)	296
Sse9I	AATT	4 cut(s)	280, 418, 442, 497
SsiI	CCGC	8 cut(s)	469, 780, 879, 945, 982, 1196, 1201, 1227
SspI	AATATT	1 cut(s)	840
SspMI	CTAG	8 cut(s)	9, 89, 611, 777, 821, 890, 995, 1217
StyD4I	CCNGG	3 cut(s)	1026, 1314, 1319
StyI	CCWWGG	1 cut(s)	106
TaaI	ACNGT	3 cut(s)	449, 676, 1145
TaiI	ACGT	2 cut(s)	357, 1188
TaqI	TCGA	5 cut(s)	544, 695, 831, 962, 1123
TasI	AATT	4 cut(s)	280, 418, 442, 497
TatI	WGTACW	1 cut(s)	130
TfiI	GAWTC	4 cut(s)	111, 383, 437, 508
Tru1I	TTAA	3 cut(s)	597, 770, 791
Tru9I	TTAA	3 cut(s)	597, 770, 791
TscAI	CASTG	1 cut(s)	943
TseI	GCWGC	4 cut(s)	73, 953, 1061, 1113
TspGWI	ACGGA	1 cut(s)	557
TspRI	CASTG	1 cut(s)	943
VpaK11BI	GGWCC	4 cut(s)	5, 146, 487, 1312
VspI	ATTAAT	1 cut(s)	770
XapI	RAATTY	1 cut(s)	497
XbaI	TCTAGA	1 cut(s)	1216
XspI	CTAG	8 cut(s)	9, 89, 611, 777, 821, 890, 995, 1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.