Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000784.1

Orthogroup ID

OG0004284

Physical Location & Seq

Genomic Coordinates Reverse (-)

9073 .. 12045

Gene Structure 2973 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

atgggtctcagactcctaagaccgctactgtggcaaaaacacgtggcagaagcccaccatggagctgcacagggccaaggaatgtcggccacgtggtgtgaaaagaacaaggtaactgtttcgctggctgttacggtgacggctgaagacggcgcgccgtggacgaggaaaaaaagtgtatatactcctatacgtgcccctgtggtgccatacacggagacggtgggggcccacgtggagggagatggtggtggtggtggtggtggcgggggtcttagtctattaccgtttctgaaatcttttgagacagttcggttagagatgactaagcaaaatgtggtagtgtccgatgctgactcccaaatcatgaacatggcgatatcggttgccgtgtcgaactcttcgattttcagtgcggcggcggagaagcctccgatggcgccgggtgggtatatatccatctcgaggaagagattgatgaacttgaagaaccttgacattattaatggaggtgaaagactcacctcttgggtggactcgatgaaggcttcatctcccacccatattcagtcttccccttgcttggtgaaaggccagagttcttggatgcttcagcacccatcagccttagacacgtttgacaaaatcatagaagtttcccaaggcaagcaaattgtcatgtttctggactatgatggcactctttcgcccatagtcgaagacccagatcgagcttttatgtcggattcaatgaggaagaccgtgaaacaacttgctaggtgttttcctactgcaatagtgagtggaagatgcagagacaaggtgtacaaatttgtacgattggcagagttgtactatgctggtagccatggtatggacattaaaggtccagcaaaaggttccaaatacaagaaaggtagccaaggtgttctttgccaaccagcaagtgagtttcttcctatgattgatgaagtttataagctactggttgagaagaccaaatcaactcctggagcaaaagttgagaacaacaagttctgtctctctgtgcattttcgctgtgttgatgaaaagaaatggagtgaactggcctcgcaagttagatcagttttgaaggagtacccacagcttagactctctcaaggaagaaaggttttggaaattcgtcctaccatcaaatgggacaaaggcaaggctcttgaatttttgctggagtcacttggatacgccaattgcaatgatgtttttcctgtgtacattggagatgaccgaaccgatgaagatgcgtttaaggtattgagagacagaggacaaggttttggcattctcgtctcaaaaattccaaaggaaaccagcgcaacttattctttacaggaaccggctgaggttatggactttctccagcgtttggttgagtggaaaagacaagcagtacggagccaagccatgttgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004805 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0022603 GO:0030312 GO:0031974 GO:0031981 GO:0034637 GO:0042221 GO:0042578 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046351 GO:0046686 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0060688 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:1900618 GO:1901576 GO:1905428 GO:2000026 GO:2000032

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Trehalose_PPase

Protein Analysis

484

Amino Acids

53.48

Weight (kDa)

9.14

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trehalose_PPase	PF02358	228 - 460	1.5e-76	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004284)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22210 AT1G78090 AT1G78090 AT2G22190 AT2G22190 AT4G39770 AT4G39770 AT5G10100 AT5G10100 AT5G10100 AT5G10100 AT5G65140 AT5G65140 AT5G65140
fragaria_vesca	FvH4_1g21200 FvH4_1g21200 FvH4_1g21200 FvH4_1g21200
malus_domestica	MD15G1326700.v1.1
prunus_persica	Prupe.6G182400_v2.0.a1
pyrus_communis	pycom01g05510 pycom15g28800
rosa_chinensis	RchiOBHm_Chr2g0115021
rosa_laevigata	RLG00000018138
rosa_multiflora	Rmu_sc0000784.1_g000004
rosa_roxburghii	Rroxscaffold_2G00130490
rosa_rugosa	Rorug02G0192300
rosa_samantha	Rh2AG250900 Rh2BG260300 Rh2CG255200 Rh2DG259000
rosa_wichuraiana	Rw2G019590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	978
AccB1I	GGYRCC	2 cut(s)	205, 439
AccB7I	CCANNNNNTGG	3 cut(s)	874, 1179, 1408
AccII	CGCG	1 cut(s)	155
AciI	CCGC	5 cut(s)	23, 267, 416, 419, 422
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	4 cut(s)	830, 1161, 1202, 1338
AcuI	CTGAAG	2 cut(s)	165, 596
AcvI	CACGTG	3 cut(s)	43, 93, 235
AcyI	GRCGYC	1 cut(s)	440
AdeI	CACNNNGTG	1 cut(s)	96
AfaI	GTAC	6 cut(s)	827, 837, 854, 1121, 1256, 1434
AfiI	CCNNNNNNNGG	7 cut(s)	238, 465, 583, 874, 896, 1179, 1408
AflIII	ACRYGT	2 cut(s)	40, 633
AgsI	TTSAA	4 cut(s)	487, 750, 1114, 1202
AjnI	CCWGG	1 cut(s)	1009
AluBI	AGCT	4 cut(s)	65, 734, 982, 1129
AluI	AGCT	4 cut(s)	65, 734, 982, 1129
Alw26I	GTCTC	7 cut(s)	11, 212, 299, 810, 1046, 1296, 1336
Ama87I	CYCGRG	1 cut(s)	463
AoxI	GGCC	5 cut(s)	73, 87, 228, 592, 1089
ApaI	GGGCCC	1 cut(s)	232
ApeKI	GCWGC	1 cut(s)	65
ApoI	RAATTY	4 cut(s)	830, 1161, 1202, 1338
AscI	GGCGCGCC	1 cut(s)	153
AseI	ATTAAT	1 cut(s)	504
AspLEI	GCGC	4 cut(s)	155, 157, 442, 1358
AspS9I	GGNCC	4 cut(s)	73, 228, 229, 887
AsuC2I	CCSGG	1 cut(s)	444
AsuHPI	GGTGA	4 cut(s)	148, 514, 524, 598
AvaI	CYCGRG	1 cut(s)	463
AvaII	GGWCC	1 cut(s)	887
BaeGI	GKGCMC	2 cut(s)	199, 232
BanI	GGYRCC	2 cut(s)	205, 439
BanII	GRGCYC	1 cut(s)	232
BbrPI	CACGTG	3 cut(s)	43, 93, 235
BbsI	GAAGAC	5 cut(s)	153, 564, 726, 764, 1001
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	1 cut(s)	52
BccI	CCATC	6 cut(s)	239, 430, 467, 628, 689, 1181
BceAI	ACGGC	4 cut(s)	142, 156, 166, 374
BcgI	CGANNNNNNTGC	2 cut(s)	1265, 1299
BciT130I	CCWGG	1 cut(s)	1011
BciVI	GTATCC	1 cut(s)	1217
BcnI	CCSGG	1 cut(s)	444
BcoDI	GTCTC	7 cut(s)	11, 212, 299, 810, 1046, 1296, 1336
BfaI	CTAG	1 cut(s)	777
BfoI	RGCGCY	1 cut(s)	443
BfuI	GTATCC	1 cut(s)	1217
BisI	GCNGC	3 cut(s)	66, 417, 420
BlsI	GCNGC	3 cut(s)	67, 418, 421
Bme1390I	CCNGG	2 cut(s)	444, 1011
Bme18I	GGWCC	1 cut(s)	887
BmeT110I	CYCGRG	1 cut(s)	463
BmgT120I	GGNCC	4 cut(s)	73, 228, 229, 887
BmiI	GGNNCC	7 cut(s)	207, 229, 230, 441, 901, 1377, 1439
BmrFI	CCNGG	2 cut(s)	444, 1011
BmsI	GCATC	4 cut(s)	340, 597, 800, 1273
BpiI	GAAGAC	5 cut(s)	153, 564, 726, 764, 1001
BpmI	CTGGAG	3 cut(s)	1032, 1232, 1385
Bpu10I	CCTNAGC	1 cut(s)	1383
BpuEI	CTTGAG	1 cut(s)	1125
BpuMI	CCSGG	1 cut(s)	444
BsaAI	YACGTR	4 cut(s)	43, 93, 194, 235
BsaHI	GRCGYC	1 cut(s)	440
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	6 cut(s)	58, 76, 158, 661, 868, 922
BsaXI	ACNNNNNCTCC	2 cut(s)	1005, 1035
Bsc4I	CCNNNNNNNGG	7 cut(s)	238, 465, 583, 874, 896, 1179, 1408
Bse118I	RCCGGY	1 cut(s)	1378
Bse1I	ACTGG	2 cut(s)	990, 1092
Bse3DI	GCAATG	1 cut(s)	1243
BseBI	CCWGG	1 cut(s)	1011
BseDI	CCNNGG	6 cut(s)	58, 76, 158, 661, 868, 922
BseGI	GGATG	1 cut(s)	612
BseLI	CCNNNNNNNGG	7 cut(s)	238, 465, 583, 874, 896, 1179, 1408
BseMI	GCAATG	1 cut(s)	1243
BseMII	CTCAG	2 cut(s)	22, 1374
BseNI	ACTGG	2 cut(s)	990, 1092
BsePI	GCGCGC	1 cut(s)	153
BseSI	GKGCMC	2 cut(s)	199, 232
BseXI	GCAGC	1 cut(s)	52
BsgI	GTGCAG	1 cut(s)	51
Bsh1236I	CGCG	1 cut(s)	155
BshFI	GGCC	5 cut(s)	75, 89, 230, 594, 1091
BshNI	GGYRCC	2 cut(s)	205, 439
BsiHKCI	CYCGRG	1 cut(s)	463
BsiSI	CCGG	2 cut(s)	443, 1379
BslFI	GGGAC	1 cut(s)	1196
BslI	CCNNNNNNNGG	7 cut(s)	238, 465, 583, 874, 896, 1179, 1408
BsmAI	GTCTC	7 cut(s)	11, 212, 299, 810, 1046, 1296, 1336
BsmBI	CGTCTC	2 cut(s)	212, 1336
BsmFI	GGGAC	1 cut(s)	1196
BsmI	GAATGC	1 cut(s)	1323
BsnI	GGCC	5 cut(s)	75, 89, 230, 594, 1091
Bso31I	GGTCTC	1 cut(s)	11
BsoBI	CYCGRG	1 cut(s)	463
Bsp120I	GGGCCC	1 cut(s)	228
Bsp1286I	GDGCHC	2 cut(s)	199, 232
Bsp1407I	TGTACA	2 cut(s)	825, 1254
Bsp143I	GATC	2 cut(s)	727, 1103
Bsp19I	CCATGG	2 cut(s)	58, 868
BspACI	CCGC	5 cut(s)	23, 267, 416, 419, 422
BspANI	GGCC	5 cut(s)	75, 89, 230, 594, 1091
BspCNI	CTCAG	2 cut(s)	21, 1375
BspFNI	CGCG	1 cut(s)	155
BspHI	TCATGA	1 cut(s)	366
BspLI	GGNNCC	7 cut(s)	207, 229, 230, 441, 901, 1377, 1439
BspT107I	GGYRCC	2 cut(s)	205, 439
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	1 cut(s)	1243
BsrFI	RCCGGY	1 cut(s)	1378
BsrGI	TGTACA	2 cut(s)	825, 1254
BsrI	ACTGG	2 cut(s)	990, 1092
BssAI	RCCGGY	1 cut(s)	1378
BssECI	CCNNGG	6 cut(s)	58, 76, 158, 661, 868, 922
BssHII	GCGCGC	1 cut(s)	153
BssMI	GATC	2 cut(s)	727, 1103
BssNI	GRCGYC	1 cut(s)	440
BssT1I	CCWWGG	5 cut(s)	58, 76, 661, 868, 922
Bst2UI	CCWGG	1 cut(s)	1011
Bst4CI	ACNGT	7 cut(s)	30, 118, 136, 223, 288, 310, 763
Bst6I	CTCTTC	2 cut(s)	406, 464
BstACI	GRCGYC	1 cut(s)	440
BstAUI	TGTACA	2 cut(s)	825, 1254
BstBAI	YACGTR	4 cut(s)	43, 93, 194, 235
BstC8I	GCNNGC	3 cut(s)	126, 155, 668
BstDEI	CTNAG	7 cut(s)	8, 17, 275, 327, 628, 1130, 1383
BstDSI	CCRYGG	3 cut(s)	58, 158, 868
BstF5I	GGATG	1 cut(s)	612
BstFNI	CGCG	1 cut(s)	155
BstH2I	RGCGCY	1 cut(s)	443
BstHHI	GCGC	4 cut(s)	155, 157, 442, 1358
BstKTI	GATC	2 cut(s)	730, 1106
BstMAI	GTCTC	7 cut(s)	11, 212, 299, 810, 1046, 1296, 1336
BstMBI	GATC	2 cut(s)	727, 1103
BstMWI	GCNNNNNNNGC	1 cut(s)	31
BstNI	CCWGG	1 cut(s)	1011
BstSCI	CCNGG	2 cut(s)	442, 1009
BstSLI	GKGCMC	2 cut(s)	199, 232
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	1 cut(s)	52
BstV2I	GAAGAC	5 cut(s)	153, 564, 726, 764, 1001
BsuI	GTATCC	1 cut(s)	1217
BsuRI	GGCC	5 cut(s)	75, 89, 230, 594, 1091
BtgI	CCRYGG	3 cut(s)	58, 158, 868
BtsCI	GGATG	1 cut(s)	612
BtsIMutI	CAGTG	1 cut(s)	418
Cac8I	GCNNGC	3 cut(s)	126, 155, 668
CciI	TCATGA	1 cut(s)	366
CfoI	GCGC	4 cut(s)	155, 157, 442, 1358
Cfr10I	RCCGGY	1 cut(s)	1378
Cfr13I	GGNCC	4 cut(s)	73, 228, 229, 887
Csp6I	GTAC	6 cut(s)	826, 836, 853, 1120, 1255, 1433
CviAII	CATG	6 cut(s)	59, 367, 373, 679, 869, 1447
CviQI	GTAC	6 cut(s)	826, 836, 853, 1120, 1255, 1433
DdeI	CTNAG	7 cut(s)	8, 17, 275, 327, 628, 1130, 1383
DinI	GGCGCC	1 cut(s)	441
DpnI	GATC	2 cut(s)	729, 1105
DpnII	GATC	2 cut(s)	727, 1103
DraIII	CACNNNGTG	1 cut(s)	96
EaeI	YGGCCR	1 cut(s)	87
Eam1104I	CTCTTC	2 cut(s)	406, 464
EarI	CTCTTC	2 cut(s)	406, 464
EciI	GGCGGA	1 cut(s)	437
Eco130I	CCWWGG	5 cut(s)	58, 76, 661, 868, 922
Eco24I	GRGCYC	1 cut(s)	232
Eco31I	GGTCTC	1 cut(s)	11
Eco32I	GATATC	1 cut(s)	381
Eco47I	GGWCC	1 cut(s)	887
Eco57I	CTGAAG	2 cut(s)	165, 596
Eco72I	CACGTG	3 cut(s)	43, 93, 235
Eco88I	CYCGRG	1 cut(s)	463
EcoO109I	RGGNCCY	1 cut(s)	228
EcoRII	CCWGG	1 cut(s)	1009
EcoRV	GATATC	1 cut(s)	381
EcoT14I	CCWWGG	5 cut(s)	58, 76, 661, 868, 922
EcoT38I	GRGCYC	1 cut(s)	232
EgeI	GGCGCC	1 cut(s)	441
EheI	GGCGCC	1 cut(s)	441
ErhI	CCWWGG	5 cut(s)	58, 76, 661, 868, 922
Esp3I	CGTCTC	2 cut(s)	212, 1336
FaeI	CATG	6 cut(s)	62, 370, 376, 682, 872, 1450
FalI	AAGNNNNNCTT	2 cut(s)	915, 947
FaqI	GGGAC	1 cut(s)	1196
FatI	CATG	6 cut(s)	58, 366, 372, 678, 868, 1446
FauI	CCCGC	1 cut(s)	260
Fnu4HI	GCNGC	3 cut(s)	66, 417, 420
FokI	GGATG	1 cut(s)	619
FriOI	GRGCYC	1 cut(s)	232
Fsp4HI	GCNGC	3 cut(s)	66, 417, 420
FspBI	CTAG	1 cut(s)	777
GlaI	GCGC	4 cut(s)	154, 156, 441, 1357
GluI	GCNGC	3 cut(s)	66, 417, 420
GsuI	CTGGAG	3 cut(s)	1032, 1232, 1385
HaeII	RGCGCY	1 cut(s)	443
HaeIII	GGCC	5 cut(s)	75, 89, 230, 594, 1091
HapII	CCGG	2 cut(s)	443, 1379
HhaI	GCGC	4 cut(s)	155, 157, 442, 1358
Hin1I	GRCGYC	1 cut(s)	440
Hin1II	CATG	6 cut(s)	62, 370, 376, 682, 872, 1450
Hin6I	GCGC	4 cut(s)	153, 155, 440, 1356
HinP1I	GCGC	4 cut(s)	153, 155, 440, 1356
HinfI	GANTC	7 cut(s)	12, 356, 519, 536, 746, 1134, 1214
HpaII	CCGG	2 cut(s)	443, 1379
HphI	GGTGA	4 cut(s)	148, 514, 524, 598
Hpy166II	GTNNAC	5 cut(s)	162, 535, 826, 1085, 1255
Hpy188I	TCNGA	5 cut(s)	11, 294, 349, 435, 745
Hpy188III	TCNNGA	4 cut(s)	367, 463, 686, 1199
Hpy8I	GTNNAC	5 cut(s)	162, 535, 826, 1085, 1255
HpyAV	CCTTC	2 cut(s)	538, 1108
HpyCH4III	ACNGT	7 cut(s)	30, 118, 136, 223, 288, 310, 763
HpyCH4IV	ACGT	5 cut(s)	42, 92, 193, 234, 635
HpyCH4V	TGCA	5 cut(s)	68, 794, 813, 1051, 1236
HpyF10VI	GCNNNNNNNGC	1 cut(s)	31
HpyF3I	CTNAG	7 cut(s)	8, 17, 275, 327, 628, 1130, 1383
HpySE526I	ACGT	5 cut(s)	42, 92, 193, 234, 635
Hsp92I	GRCGYC	1 cut(s)	440
Hsp92II	CATG	6 cut(s)	62, 370, 376, 682, 872, 1450
HspAI	GCGC	4 cut(s)	153, 155, 440, 1356
KasI	GGCGCC	1 cut(s)	439
Kzo9I	GATC	2 cut(s)	727, 1103
LmnI	GCTCC	3 cut(s)	62, 1013, 1437
Lsp1109I	GCAGC	1 cut(s)	52
LweI	GCATC	4 cut(s)	340, 597, 800, 1273
MaeI	CTAG	1 cut(s)	777
MaeII	ACGT	5 cut(s)	42, 92, 193, 234, 635
MaeIII	GTNAC	4 cut(s)	112, 130, 136, 1215
MalI	GATC	2 cut(s)	729, 1105
MboI	GATC	2 cut(s)	727, 1103
MfeI	CAATTG	1 cut(s)	1231
MhlI	GDGCHC	2 cut(s)	199, 232
MluCI	AATT	6 cut(s)	672, 830, 1161, 1202, 1231, 1338
Mly113I	GGCGCC	1 cut(s)	440
MlyI	GAGTC	6 cut(s)	6, 350, 513, 530, 1128, 1223
MmeI	TCCRAC	1 cut(s)	723
MseI	TTAA	3 cut(s)	504, 882, 1290
MslI	CAYNNNNRTG	1 cut(s)	371
MspI	CCGG	2 cut(s)	443, 1379
MspR9I	CCNGG	2 cut(s)	444, 1011
MunI	CAATTG	1 cut(s)	1231
Mva1269I	GAATGC	1 cut(s)	1323
MvaI	CCWGG	1 cut(s)	1011
MvnI	CGCG	1 cut(s)	155
MwoI	GCNNNNNNNGC	1 cut(s)	31
NarI	GGCGCC	1 cut(s)	440
NciI	CCSGG	1 cut(s)	444
NcoI	CCATGG	2 cut(s)	58, 868
NdeII	GATC	2 cut(s)	727, 1103
NlaIII	CATG	6 cut(s)	62, 370, 376, 682, 872, 1450
NlaIV	GGNNCC	7 cut(s)	207, 229, 230, 441, 901, 1377, 1439
NmuCI	GTSAC	2 cut(s)	136, 1215
PaeR7I	CTCGAG	1 cut(s)	463
PagI	TCATGA	1 cut(s)	366
PalAI	GGCGCGCC	1 cut(s)	153
PauI	GCGCGC	1 cut(s)	153
PcsI	WCGNNNNNNNCGW	1 cut(s)	401
PctI	GAATGC	1 cut(s)	1323
PfeI	GAWTC	1 cut(s)	746
PflMI	CCANNNNNTGG	3 cut(s)	874, 1179, 1408
PfoI	TCCNGGA	1 cut(s)	1009
PkrI	GCNGC	3 cut(s)	67, 418, 421
PleI	GAGTC	6 cut(s)	6, 350, 513, 530, 1128, 1222
PluTI	GGCGCC	1 cut(s)	443
PmaCI	CACGTG	3 cut(s)	43, 93, 235
PmlI	CACGTG	3 cut(s)	43, 93, 235
PpsI	GAGTC	6 cut(s)	6, 350, 513, 530, 1128, 1222
Ppu21I	YACGTR	4 cut(s)	43, 93, 194, 235
PshBI	ATTAAT	1 cut(s)	504
PsiI	TTATAA	1 cut(s)	978
Psp6I	CCWGG	1 cut(s)	1009
PspCI	CACGTG	3 cut(s)	43, 93, 235
PspGI	CCWGG	1 cut(s)	1009
PspN4I	GGNNCC	7 cut(s)	207, 229, 230, 441, 901, 1377, 1439
PspOMI	GGGCCC	1 cut(s)	228
PspPI	GGNCC	4 cut(s)	73, 228, 229, 887
PteI	GCGCGC	1 cut(s)	153
RsaI	GTAC	6 cut(s)	827, 837, 854, 1121, 1256, 1434
RsaNI	GTAC	6 cut(s)	826, 836, 853, 1120, 1255, 1433
RseI	CAYNNNNRTG	1 cut(s)	371
SaqAI	TTAA	3 cut(s)	504, 882, 1290
SatI	GCNGC	3 cut(s)	66, 417, 420
Sau3AI	GATC	2 cut(s)	727, 1103
Sau96I	GGNCC	4 cut(s)	73, 228, 229, 887
SchI	GAGTC	6 cut(s)	6, 350, 513, 530, 1128, 1223
ScrFI	CCNGG	2 cut(s)	444, 1011
SduI	GDGCHC	2 cut(s)	199, 232
SfaNI	GCATC	4 cut(s)	340, 597, 800, 1273
SfoI	GGCGCC	1 cut(s)	441
Sfr274I	CTCGAG	1 cut(s)	463
SgsI	GGCGCGCC	1 cut(s)	153
SinI	GGWCC	1 cut(s)	887
SlaI	CTCGAG	1 cut(s)	463
SmiMI	CAYNNNNRTG	1 cut(s)	371
SmlI	CTYRAG	2 cut(s)	463, 1140
SmoI	CTYRAG	2 cut(s)	463, 1140
Sse9I	AATT	6 cut(s)	672, 830, 1161, 1202, 1231, 1338
SsiI	CCGC	5 cut(s)	23, 267, 416, 419, 422
SspDI	GGCGCC	1 cut(s)	439
SspMI	CTAG	1 cut(s)	777
StyD4I	CCNGG	2 cut(s)	442, 1009
StyI	CCWWGG	5 cut(s)	58, 76, 661, 868, 922
TaaI	ACNGT	7 cut(s)	30, 118, 136, 223, 288, 310, 763
TaiI	ACGT	5 cut(s)	45, 95, 196, 237, 638
TaqI	TCGA	6 cut(s)	395, 404, 464, 539, 717, 730
TaqII	GACCGA	1 cut(s)	1284
TasI	AATT	6 cut(s)	672, 830, 1161, 1202, 1231, 1338
TatI	WGTACW	3 cut(s)	825, 852, 1254
TauI	GCSGC	2 cut(s)	419, 422
TfiI	GAWTC	1 cut(s)	746
Tru1I	TTAA	3 cut(s)	504, 882, 1290
Tru9I	TTAA	3 cut(s)	504, 882, 1290
TscAI	CASTG	1 cut(s)	418
TseFI	GTSAC	2 cut(s)	136, 1215
TseI	GCWGC	1 cut(s)	65
Tsp45I	GTSAC	2 cut(s)	136, 1215
TspDTI	ATGAA	7 cut(s)	383, 494, 540, 557, 984, 1083, 1293
TspGWI	ACGGA	2 cut(s)	230, 1450
TspRI	CASTG	1 cut(s)	418
Van91I	CCANNNNNTGG	3 cut(s)	874, 1179, 1408
VpaK11BI	GGWCC	1 cut(s)	887
VspI	ATTAAT	1 cut(s)	504
XapI	RAATTY	4 cut(s)	830, 1161, 1202, 1338
XhoI	CTCGAG	1 cut(s)	463
XspI	CTAG	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.