Rmu_sc0000800.1_g000029

formamidase C869.04 isoform X1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000800.1
Physical Location & Seq
Forward (+)
95510 .. 98618
3109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000800.1_g000029.1.cds

Sequence Viewer

Length: 1473 bp
atggctgtcaaacttcaatccttagatgaaagctgcatatcatcacttcaaccaaaacaaggaatcttcaatccatcatcttaccattgctcatcttcaacaagaccaaaaatggcttcttcttatggagcaagactggttgtgccgatagatgtgaaaaagaagccatgggagcagaaacttccacttcacaaccggtggcacccggatataccacctgtggcagaagctacggtgggagaggtttttcgagttgaaatggttgatttcagcgggggaggtatcacaaaggaatacactgccgaggacatcaagaatgccaatccttcaattgttcattatctcagcggaccgattaggatttcagacaaggatggaattccagcacagccaggtgatcttctggtagttgagatatgcaacttgggtcctcttccaggagatgaatggggtttcacagcaacattcgacagagaaaatggagggggatttctgactgaccattttccttgtgcaaccaaagctatttggtattttgaagggatatatgcctactctcctcaaataccaggagtgagattcccagggttaacacaccctggaatagttggaacagcaccatcaacggaactcttgaacatatggaataagagggagagagaacttgaggaaaatggagtcaagtctctgaaactatgtgaggttgtgcaccaacggcccttggctagcctaccatcaacaaaaggttgcgtccttggagggatcaaagagggcactcccgaatgggaaaagatagcagtggaggccgcaagaacaattccaggaagagaaaatggtggcaattgtgacatcaagaatcttagtagaggttcaaaggtataccttccagtattcattgaaggagcaaatcttagcactggtgacatgcacttttcacagggagatggcgaaatcgcattctgtggtgcgattgagatgagtggtttcctggagctcaagtgtgaaattataagggatggaatgaaagaatacctaacaccgatggggccaactcctcttcatgtgaatccaatctttgaaataggtcccgtcgagccaagattctcggaatggttggtatttgagggcattagtgttgatgagagtgggaagcagcactacctagatgcaactgttgcttacaagcgtgcagtactgaatgccatcgactacctctctaaatttggatactcaaaagaacagagctaccttctgctgtcatgctgtccatgcgagggaagaatttctggaatagtcgacgctcccaatgctgttgcaaccctagcaatcccaacagctatctttgaccaggatattcgaccaaaaacgaacaaggtcccggttggtccccggatagtgaggacaccagatgtcctaaaatgtacttacgatggaaatttgccaacgacaaggaaccctagctcagcaacataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

490

Amino Acids

53.55

Weight (kDa)

5.69

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1010
AccB1I GGYRCC 1 cut(s) 201
AccI GTMKAC 2 cut(s) 879, 1296
AciI CCGC 3 cut(s) 273, 348, 807
AclWI GGATC 1 cut(s) 770
AcsI RAATTY 4 cut(s) 378, 1220, 1281, 1435
AfaI GTAC 2 cut(s) 1194, 1423
AfiI CCNNNNNNNGG 3 cut(s) 59, 437, 1274
AgeI ACCGGT 1 cut(s) 195
AjnI CCWGG 8 cut(s) 391, 436, 568, 583, 598, 820, 987, 1347
AjuI GAANNNNNNNTTGG 2 cut(s) 100, 132
AluBI AGCT 7 cut(s) 33, 230, 524, 994, 1245, 1337, 1461
AluI AGCT 7 cut(s) 33, 230, 524, 994, 1245, 1337, 1461
Alw21I GWGCWC 2 cut(s) 711, 996
Alw26I GTCTC 1 cut(s) 690
Alw44I GTGCAC 1 cut(s) 707
AlwI GGATC 1 cut(s) 770
AoxI GGCC 3 cut(s) 716, 804, 1046
ApaLI GTGCAC 1 cut(s) 707
ApeKI GCWGC 2 cut(s) 33, 1153
ApoI RAATTY 4 cut(s) 378, 1220, 1281, 1435
AsiGI ACCGGT 1 cut(s) 195
Asp700I GAANNNNTTC 1 cut(s) 1282
AspS9I GGNCC 7 cut(s) 350, 428, 717, 1046, 1085, 1375, 1385
AsuC2I CCSGG 3 cut(s) 206, 1379, 1390
AsuHPI GGTGA 2 cut(s) 407, 932
AsuNHI GCTAGC 1 cut(s) 725
AvaII GGWCC 5 cut(s) 350, 428, 1085, 1375, 1385
BaeGI GKGCMC 2 cut(s) 711, 776
BanI GGYRCC 1 cut(s) 201
BanII GRGCYC 1 cut(s) 996
BarI GAAGNNNNNNTAC 2 cut(s) 1142, 1174
Bbv12I GWGCWC 2 cut(s) 711, 996
BbvI GCAGC 2 cut(s) 20, 1165
BccI CCATC 9 cut(s) 82, 368, 628, 742, 938, 1010, 1036, 1211, 1424
BceAI ACGGC 1 cut(s) 731
BciT130I CCWGG 8 cut(s) 393, 438, 570, 585, 600, 822, 989, 1349
BciVI GTATCC 1 cut(s) 1220
BcnI CCSGG 3 cut(s) 206, 1379, 1390
BcoDI GTCTC 1 cut(s) 690
BfaI CTAG 4 cut(s) 726, 1163, 1322, 1458
BfuI GTATCC 1 cut(s) 1220
BisI GCNGC 3 cut(s) 34, 807, 1154
BlpI GCTNAGC 1 cut(s) 1462
BlsI GCNGC 3 cut(s) 35, 808, 1155
BmcAI AGTACT 1 cut(s) 1194
Bme18I GGWCC 5 cut(s) 350, 428, 1085, 1375, 1385
BmgT120I GGNCC 7 cut(s) 350, 428, 717, 1046, 1085, 1375, 1385
BmiI GGNNCC 7 cut(s) 203, 429, 1047, 1087, 1377, 1387, 1454
BmsI GCATC 1 cut(s) 1156
BmtI GCTAGC 1 cut(s) 729
BpmI CTGGAG 1 cut(s) 1010
Bpu1102I GCTNAGC 1 cut(s) 1462
BpuEI CTTGAG 2 cut(s) 686, 980
BpuMI CCSGG 3 cut(s) 206, 1379, 1390
BsaJI CCNNGG 8 cut(s) 167, 303, 583, 584, 598, 720, 754, 1388
BsaWI WCCGGW 1 cut(s) 195
BsaXI ACNNNNNCTCC 2 cut(s) 983, 1013
Bsc4I CCNNNNNNNGG 3 cut(s) 59, 437, 1274
Bse118I RCCGGY 1 cut(s) 195
Bse1I ACTGG 3 cut(s) 141, 887, 922
Bse3DI GCAATG 1 cut(s) 85
BseBI CCWGG 8 cut(s) 393, 438, 570, 585, 600, 822, 989, 1349
BseDI CCNNGG 8 cut(s) 167, 303, 583, 584, 598, 720, 754, 1388
BseGI GGATG 2 cut(s) 379, 1021
BseLI CCNNNNNNNGG 3 cut(s) 59, 437, 1274
BseMI GCAATG 1 cut(s) 85
BseMII CTCAG 1 cut(s) 358
BseNI ACTGG 3 cut(s) 141, 887, 922
BseRI GAGGAG 2 cut(s) 549, 1044
BseSI GKGCMC 2 cut(s) 711, 776
BseXI GCAGC 2 cut(s) 20, 1165
BsgI GTGCAG 1 cut(s) 1209
BshFI GGCC 3 cut(s) 718, 806, 1048
BshNI GGYRCC 1 cut(s) 201
BshTI ACCGGT 1 cut(s) 195
BsiHKAI GWGCWC 2 cut(s) 711, 996
BsiSI CCGG 4 cut(s) 196, 206, 1379, 1390
BslFI GGGAC 3 cut(s) 1071, 1361, 1371
BslI CCNNNNNNNGG 3 cut(s) 59, 437, 1274
BsmAI GTCTC 1 cut(s) 690
BsmFI GGGAC 3 cut(s) 1071, 1361, 1371
BsmI GAATGC 3 cut(s) 322, 956, 1204
BsnI GGCC 3 cut(s) 718, 806, 1048
Bsp1286I GDGCHC 3 cut(s) 711, 776, 996
Bsp143I GATC 2 cut(s) 397, 762
Bsp1720I GCTNAGC 1 cut(s) 1462
Bsp19I CCATGG 1 cut(s) 167
BspACI CCGC 3 cut(s) 273, 348, 807
BspANI GGCC 3 cut(s) 718, 806, 1048
BspCNI CTCAG 1 cut(s) 357
BspLI GGNNCC 7 cut(s) 203, 429, 1047, 1087, 1377, 1387, 1454
BspOI GCTAGC 1 cut(s) 729
BspPI GGATC 1 cut(s) 770
BspT107I GGYRCC 1 cut(s) 201
BsrDI GCAATG 1 cut(s) 85
BsrFI RCCGGY 1 cut(s) 195
BsrI ACTGG 3 cut(s) 141, 887, 922
BssAI RCCGGY 1 cut(s) 195
BssECI CCNNGG 8 cut(s) 167, 303, 583, 584, 598, 720, 754, 1388
BssMI GATC 2 cut(s) 397, 762
BssNAI GTATAC 1 cut(s) 880
BssT1I CCWWGG 3 cut(s) 167, 720, 754
Bst1107I GTATAC 1 cut(s) 880
Bst2UI CCWGG 8 cut(s) 393, 438, 570, 585, 600, 822, 989, 1349
Bst4CI ACNGT 2 cut(s) 235, 1174
Bst6I CTCTTC 3 cut(s) 438, 820, 1062
BstAPI GCANNNNNTGC 1 cut(s) 1175
BstC8I GCNNGC 2 cut(s) 727, 1188
BstDEI CTNAG 5 cut(s) 22, 344, 860, 911, 1462
BstDSI CCRYGG 1 cut(s) 167
BstENI CCTNNNNNAGG 1 cut(s) 435
BstF5I GGATG 2 cut(s) 379, 1021
BstKTI GATC 2 cut(s) 400, 765
BstMAI GTCTC 1 cut(s) 690
BstMBI GATC 2 cut(s) 397, 762
BstMWI GCNNNNNNNGC 8 cut(s) 172, 521, 715, 803, 1175, 1269, 1307, 1322
BstNI CCWGG 8 cut(s) 393, 438, 570, 585, 600, 822, 989, 1349
BstNSI RCATGY 1 cut(s) 928
BstSLI GKGCMC 2 cut(s) 711, 776
BstV1I GCAGC 2 cut(s) 20, 1165
BstZ17I GTATAC 1 cut(s) 880
BsuI GTATCC 1 cut(s) 1220
BsuRI GGCC 3 cut(s) 718, 806, 1048
BtgI CCRYGG 1 cut(s) 167
BtsCI GGATG 2 cut(s) 379, 1021
BtsI GCAGTG 2 cut(s) 297, 804
BtsIMutI CAGTG 3 cut(s) 297, 804, 915
Cac8I GCNNGC 2 cut(s) 727, 1188
Cfr10I RCCGGY 1 cut(s) 195
Cfr13I GGNCC 7 cut(s) 350, 428, 717, 1046, 1085, 1375, 1385
CpoI CGGWCCG 1 cut(s) 350
CseI GACGC 2 cut(s) 739, 1307
Csp6I GTAC 2 cut(s) 1193, 1422
CspAI ACCGGT 1 cut(s) 195
CspI CGGWCCG 1 cut(s) 350
CviAII CATG 5 cut(s) 168, 925, 1061, 1260, 1269
CviQI GTAC 2 cut(s) 1193, 1422
DdeI CTNAG 5 cut(s) 22, 344, 860, 911, 1462
DpnI GATC 2 cut(s) 399, 764
DpnII GATC 2 cut(s) 397, 762
Eam1104I CTCTTC 3 cut(s) 438, 820, 1062
EarI CTCTTC 3 cut(s) 438, 820, 1062
Ecl136II GAGCTC 1 cut(s) 994
Eco130I CCWWGG 3 cut(s) 167, 720, 754
Eco24I GRGCYC 1 cut(s) 996
Eco47I GGWCC 5 cut(s) 350, 428, 1085, 1375, 1385
Eco53kI GAGCTC 1 cut(s) 994
EcoICRI GAGCTC 1 cut(s) 994
EcoNI CCTNNNNNAGG 1 cut(s) 435
EcoO109I RGGNCCY 3 cut(s) 428, 1085, 1375
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 8 cut(s) 391, 436, 568, 583, 598, 820, 987, 1347
EcoT14I CCWWGG 3 cut(s) 167, 720, 754
EcoT38I GRGCYC 1 cut(s) 996
ErhI CCWWGG 3 cut(s) 167, 720, 754
FaeI CATG 5 cut(s) 171, 928, 1064, 1263, 1272
FaqI GGGAC 3 cut(s) 1071, 1361, 1371
FatI CATG 5 cut(s) 167, 924, 1060, 1259, 1268
FauI CCCGC 1 cut(s) 266
FauNDI CATATG 1 cut(s) 641
FblI GTMKAC 2 cut(s) 879, 1296
Fnu4HI GCNGC 3 cut(s) 34, 807, 1154
FokI GGATG 2 cut(s) 386, 1028
FriOI GRGCYC 1 cut(s) 996
Fsp4HI GCNGC 3 cut(s) 34, 807, 1154
FspBI CTAG 4 cut(s) 726, 1163, 1322, 1458
GluI GCNGC 3 cut(s) 34, 807, 1154
GsuI CTGGAG 1 cut(s) 1010
HaeIII GGCC 3 cut(s) 718, 806, 1048
HapII CCGG 4 cut(s) 196, 206, 1379, 1390
HgaI GACGC 2 cut(s) 739, 1307
Hin1II CATG 5 cut(s) 171, 928, 1064, 1263, 1272
HincII GTYRAC 2 cut(s) 591, 1297
HindII GTYRAC 2 cut(s) 591, 1297
HinfI GANTC 6 cut(s) 63, 579, 678, 856, 1066, 1101
HpaI GTTAAC 1 cut(s) 591
HpaII CCGG 4 cut(s) 196, 206, 1379, 1390
HphI GGTGA 2 cut(s) 407, 932
Hpy166II GTNNAC 4 cut(s) 591, 709, 880, 1297
Hpy188I TCNGA 4 cut(s) 367, 495, 690, 1108
Hpy188III TCNNGA 5 cut(s) 313, 634, 779, 853, 1287
Hpy8I GTNNAC 4 cut(s) 591, 709, 880, 1297
Hpy99I CGWCG 2 cut(s) 1094, 1301
HpyAV CCTTC 5 cut(s) 336, 533, 893, 893, 1259
HpyCH4III ACNGT 2 cut(s) 235, 1174
HpyCH4V TGCA 8 cut(s) 36, 420, 515, 709, 928, 1169, 1190, 1316
HpyF10VI GCNNNNNNNGC 8 cut(s) 172, 521, 715, 803, 1175, 1269, 1307, 1322
HpyF3I CTNAG 5 cut(s) 22, 344, 860, 911, 1462
Hsp92II CATG 5 cut(s) 171, 928, 1064, 1263, 1272
KspAI GTTAAC 1 cut(s) 591
Kzo9I GATC 2 cut(s) 397, 762
LmnI GCTCC 5 cut(s) 128, 172, 902, 991, 1306
Lsp1109I GCAGC 2 cut(s) 20, 1165
LweI GCATC 1 cut(s) 1156
MaeI CTAG 4 cut(s) 726, 1163, 1322, 1458
MaeIII GTNAC 2 cut(s) 845, 920
MalI GATC 2 cut(s) 399, 764
MboI GATC 2 cut(s) 397, 762
MboII GAAGA 8 cut(s) 58, 87, 111, 392, 425, 837, 1049, 1290
MfeI CAATTG 2 cut(s) 330, 841
MhlI GDGCHC 3 cut(s) 711, 776, 996
MluCI AATT 8 cut(s) 330, 378, 816, 841, 1005, 1220, 1281, 1435
MlyI GAGTC 1 cut(s) 687
MmeI TCCRAC 1 cut(s) 589
MroXI GAANNNNTTC 1 cut(s) 1282
MseI TTAA 1 cut(s) 590
MspA1I CMGCKG 2 cut(s) 273, 348
MspI CCGG 4 cut(s) 196, 206, 1379, 1390
MunI CAATTG 2 cut(s) 330, 841
Mva1269I GAATGC 3 cut(s) 322, 956, 1204
MvaI CCWGG 8 cut(s) 393, 438, 570, 585, 600, 822, 989, 1349
MwoI GCNNNNNNNGC 8 cut(s) 172, 521, 715, 803, 1175, 1269, 1307, 1322
NciI CCSGG 3 cut(s) 206, 1379, 1390
NcoI CCATGG 1 cut(s) 167
NdeI CATATG 1 cut(s) 641
NdeII GATC 2 cut(s) 397, 762
NheI GCTAGC 1 cut(s) 725
NlaIII CATG 5 cut(s) 171, 928, 1064, 1263, 1272
NlaIV GGNNCC 7 cut(s) 203, 429, 1047, 1087, 1377, 1387, 1454
NmeAIII GCCGAG 1 cut(s) 328
NmuCI GTSAC 2 cut(s) 845, 920
NspI RCATGY 1 cut(s) 928
PasI CCCWGGG 1 cut(s) 584
PctI GAATGC 3 cut(s) 322, 956, 1204
PdmI GAANNNNTTC 1 cut(s) 1282
PfeI GAWTC 5 cut(s) 63, 579, 856, 1066, 1101
PfoI TCCNGGA 3 cut(s) 436, 820, 987
PinAI ACCGGT 1 cut(s) 195
PkrI GCNGC 3 cut(s) 35, 808, 1155
PleI GAGTC 1 cut(s) 686
PpsI GAGTC 1 cut(s) 686
PpuMI RGGWCCY 3 cut(s) 428, 1085, 1375
PsiI TTATAA 1 cut(s) 1010
Psp124BI GAGCTC 1 cut(s) 996
Psp5II RGGWCCY 3 cut(s) 428, 1085, 1375
Psp6I CCWGG 8 cut(s) 391, 436, 568, 583, 598, 820, 987, 1347
PspGI CCWGG 8 cut(s) 391, 436, 568, 583, 598, 820, 987, 1347
PspN4I GGNNCC 7 cut(s) 203, 429, 1047, 1087, 1377, 1387, 1454
PspPI GGNCC 7 cut(s) 350, 428, 717, 1046, 1085, 1375, 1385
PspPPI RGGWCCY 3 cut(s) 428, 1085, 1375
RsaI GTAC 2 cut(s) 1194, 1423
RsaNI GTAC 2 cut(s) 1193, 1422
Rsr2I CGGWCCG 1 cut(s) 350
RsrII CGGWCCG 1 cut(s) 350
SacI GAGCTC 1 cut(s) 996
SalI GTCGAC 1 cut(s) 1295
SaqAI TTAA 1 cut(s) 590
SatI GCNGC 3 cut(s) 34, 807, 1154
Sau3AI GATC 2 cut(s) 397, 762
Sau96I GGNCC 7 cut(s) 350, 428, 717, 1046, 1085, 1375, 1385
ScaI AGTACT 1 cut(s) 1194
SchI GAGTC 1 cut(s) 687
SduI GDGCHC 3 cut(s) 711, 776, 996
SfaNI GCATC 1 cut(s) 1156
SinI GGWCC 5 cut(s) 350, 428, 1085, 1375, 1385
SmlI CTYRAG 2 cut(s) 665, 995
SmoI CTYRAG 2 cut(s) 665, 995
Sse9I AATT 8 cut(s) 330, 378, 816, 841, 1005, 1220, 1281, 1435
SsiI CCGC 3 cut(s) 273, 348, 807
SspMI CTAG 4 cut(s) 726, 1163, 1322, 1458
SstI GAGCTC 1 cut(s) 996
StyI CCWWGG 3 cut(s) 167, 720, 754
TaaI ACNGT 2 cut(s) 235, 1174
TaqI TCGA 6 cut(s) 250, 468, 1092, 1206, 1296, 1357
TaqII GACCGA 1 cut(s) 367
TasI AATT 8 cut(s) 330, 378, 816, 841, 1005, 1220, 1281, 1435
TatI WGTACW 2 cut(s) 1192, 1421
TauI GCSGC 1 cut(s) 809
TfiI GAWTC 5 cut(s) 63, 579, 856, 1066, 1101
Tru1I TTAA 1 cut(s) 590
Tru9I TTAA 1 cut(s) 590
TscAI CASTG 3 cut(s) 304, 804, 922
TseFI GTSAC 2 cut(s) 845, 920
TseI GCWGC 2 cut(s) 33, 1153
Tsp45I GTSAC 2 cut(s) 845, 920
TspDTI ATGAA 6 cut(s) 42, 326, 459, 883, 1037, 1049
TspGWI ACGGA 1 cut(s) 641
TspRI CASTG 3 cut(s) 304, 804, 922
VneI GTGCAC 1 cut(s) 707
VpaK11BI GGWCC 5 cut(s) 350, 428, 1085, 1375, 1385
XagI CCTNNNNNAGG 1 cut(s) 435
XapI RAATTY 4 cut(s) 378, 1220, 1281, 1435
XceI RCATGY 1 cut(s) 928
XcmI CCANNNNNNNNNTGG 1 cut(s) 444
XmiI GTMKAC 2 cut(s) 879, 1296
XmnI GAANNNNTTC 1 cut(s) 1282
XspI CTAG 4 cut(s) 726, 1163, 1322, 1458
ZrmI AGTACT 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.