carboxylase beta chain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34030 |
| fragaria_vesca | FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 |
| malus_domestica | MD05G1082300.v1.1 |
| prunus_persica | Prupe.8G126800_v2.0.a1 |
| pyrus_communis | pycom05g07710 pycom05g07720 |
| rosa_chinensis | RchiOBHm_Chr6g0257681 RchiOBHm_Chr6g0257701 |
| rosa_laevigata | RLG00000014716 RLG00000014717 |
| rosa_multiflora | Rmu_sc0000916.1_g000002 Rmu_sc0006683.1_g000009 Rmu_sc0006683.1_g000013 Rmu_sc0006683.1_g000018 Rmu_sc0011315.1_g000001 Rmu_sc0011315.1_g000004 Rmu_sc0026590.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00208880 Rroxscaffold_7G00208890 |
| rosa_rugosa | Rorug05G0568900 Rorug05G0569000 Rorug05G0569100 Rorug05G0569200 Rorug05G0569300 |
| rosa_samantha | Rh6AG085700 Rh6AG086000 Rh6BG080000 Rh6BG080100 Rh6CG075000 Rh6CG075100 Rh6DG071900 Rh6DG072000 |
| rosa_wichuraiana | Rw6G007690 Rw6G007700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 662 |
| AccB1I | GGYRCC | 1 cut(s) | 494 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1392 |
| AciI | CCGC | 6 cut(s) | 59, 244, 702, 777, 1255, 1480 |
| AclWI | GGATC | 2 cut(s) | 935, 1404 |
| AcoI | YGGCCR | 1 cut(s) | 737 |
| AcsI | RAATTY | 2 cut(s) | 371, 380 |
| AcuI | CTGAAG | 3 cut(s) | 530, 603, 1350 |
| AfaI | GTAC | 3 cut(s) | 37, 517, 1384 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1129, 1240, 1392 |
| AgsI | TTSAA | 6 cut(s) | 232, 385, 509, 859, 1042, 1456 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1179 |
| AjnI | CCWGG | 1 cut(s) | 1052 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 238, 270 |
| AluBI | AGCT | 5 cut(s) | 675, 947, 1367, 1445, 1509 |
| AluI | AGCT | 5 cut(s) | 675, 947, 1367, 1445, 1509 |
| Alw21I | GWGCWC | 3 cut(s) | 772, 1023, 1216 |
| Alw26I | GTCTC | 1 cut(s) | 974 |
| AlwI | GGATC | 2 cut(s) | 935, 1404 |
| Ama87I | CYCGRG | 1 cut(s) | 574 |
| AoxI | GGCC | 2 cut(s) | 737, 774 |
| ApeKI | GCWGC | 4 cut(s) | 71, 980, 1506, 1509 |
| ApoI | RAATTY | 2 cut(s) | 371, 380 |
| AspLEI | GCGC | 1 cut(s) | 683 |
| AspS9I | GGNCC | 2 cut(s) | 53, 643 |
| AsuHPI | GGTGA | 2 cut(s) | 547, 631 |
| AvaI | CYCGRG | 1 cut(s) | 574 |
| AvaII | GGWCC | 2 cut(s) | 53, 643 |
| BaeGI | GKGCMC | 1 cut(s) | 499 |
| BanI | GGYRCC | 1 cut(s) | 494 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 276, 308 |
| Bbv12I | GWGCWC | 3 cut(s) | 772, 1023, 1216 |
| BbvI | GCAGC | 3 cut(s) | 58, 967, 1496 |
| BccI | CCATC | 9 cut(s) | 13, 616, 754, 923, 983, 1183, 1193, 1394, 1479 |
| BceAI | ACGGC | 1 cut(s) | 1218 |
| BciT130I | CCWGG | 1 cut(s) | 1054 |
| BcoDI | GTCTC | 1 cut(s) | 974 |
| BfaI | CTAG | 4 cut(s) | 114, 423, 1125, 1151 |
| BfmI | CTRYAG | 3 cut(s) | 909, 1320, 1371 |
| BfoI | RGCGCY | 1 cut(s) | 684 |
| BglII | AGATCT | 1 cut(s) | 578 |
| BisI | GCNGC | 5 cut(s) | 72, 777, 981, 1507, 1510 |
| BlsI | GCNGC | 5 cut(s) | 73, 778, 982, 1508, 1511 |
| Bme1390I | CCNGG | 1 cut(s) | 1054 |
| Bme18I | GGWCC | 2 cut(s) | 53, 643 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1179 |
| BmeT110I | CYCGRG | 1 cut(s) | 574 |
| BmgT120I | GGNCC | 2 cut(s) | 53, 643 |
| BmiI | GGNNCC | 4 cut(s) | 55, 270, 496, 645 |
| BmrFI | CCNGG | 1 cut(s) | 1054 |
| BmrI | ACTGGG | 1 cut(s) | 1262 |
| BmsI | GCATC | 1 cut(s) | 1081 |
| BmuI | ACTGGG | 1 cut(s) | 1262 |
| BpmI | CTGGAG | 2 cut(s) | 627, 1467 |
| Bpu10I | CCTNAGC | 1 cut(s) | 771 |
| BpuEI | CTTGAG | 1 cut(s) | 141 |
| BsaAI | YACGTR | 1 cut(s) | 1489 |
| BsaI | GGTCTC | 1 cut(s) | 974 |
| BsaJI | CCNNGG | 4 cut(s) | 169, 639, 1234, 1433 |
| BsaWI | WCCGGW | 2 cut(s) | 77, 557 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 72, 102, 238, 268 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1129, 1240, 1392 |
| Bse1I | ACTGG | 2 cut(s) | 1245, 1268 |
| Bse3DI | GCAATG | 3 cut(s) | 121, 300, 702 |
| BseBI | CCWGG | 1 cut(s) | 1054 |
| BseDI | CCNNGG | 4 cut(s) | 169, 639, 1234, 1433 |
| BseGI | GGATG | 2 cut(s) | 931, 1096 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1129, 1240, 1392 |
| BseMI | GCAATG | 3 cut(s) | 121, 300, 702 |
| BseMII | CTCAG | 3 cut(s) | 785, 806, 1291 |
| BseNI | ACTGG | 2 cut(s) | 1245, 1268 |
| BseSI | GKGCMC | 1 cut(s) | 499 |
| BseXI | GCAGC | 3 cut(s) | 58, 967, 1496 |
| BseYI | CCCAGC | 1 cut(s) | 215 |
| Bsh1285I | CGRYCG | 1 cut(s) | 706 |
| BshFI | GGCC | 2 cut(s) | 739, 776 |
| BshNI | GGYRCC | 1 cut(s) | 494 |
| BsiEI | CGRYCG | 1 cut(s) | 706 |
| BsiHKAI | GWGCWC | 3 cut(s) | 772, 1023, 1216 |
| BsiHKCI | CYCGRG | 1 cut(s) | 574 |
| BsiSI | CCGG | 2 cut(s) | 78, 558 |
| BslFI | GGGAC | 5 cut(s) | 629, 702, 848, 1010, 1507 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1129, 1240, 1392 |
| BsmAI | GTCTC | 1 cut(s) | 974 |
| BsmFI | GGGAC | 5 cut(s) | 629, 702, 848, 1010, 1507 |
| BsmI | GAATGC | 1 cut(s) | 748 |
| BsnI | GGCC | 2 cut(s) | 739, 776 |
| Bso31I | GGTCTC | 1 cut(s) | 974 |
| BsoBI | CYCGRG | 1 cut(s) | 574 |
| Bsp1286I | GDGCHC | 4 cut(s) | 499, 772, 1023, 1216 |
| Bsp143I | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| Bsp19I | CCATGG | 2 cut(s) | 169, 1433 |
| BspACI | CCGC | 6 cut(s) | 59, 244, 702, 777, 1255, 1480 |
| BspANI | GGCC | 2 cut(s) | 739, 776 |
| BspCNI | CTCAG | 3 cut(s) | 784, 805, 1290 |
| BspLI | GGNNCC | 4 cut(s) | 55, 270, 496, 645 |
| BspPI | GGATC | 2 cut(s) | 935, 1404 |
| BspT107I | GGYRCC | 1 cut(s) | 494 |
| BspTNI | GGTCTC | 1 cut(s) | 974 |
| BsrDI | GCAATG | 3 cut(s) | 121, 300, 702 |
| BsrI | ACTGG | 2 cut(s) | 1245, 1268 |
| BssECI | CCNNGG | 4 cut(s) | 169, 639, 1234, 1433 |
| BssMI | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| BssT1I | CCWWGG | 3 cut(s) | 169, 639, 1433 |
| Bst2UI | CCWGG | 1 cut(s) | 1054 |
| Bst4CI | ACNGT | 5 cut(s) | 273, 327, 995, 1177, 1382 |
| Bst6I | CTCTTC | 1 cut(s) | 840 |
| BstBAI | YACGTR | 1 cut(s) | 1489 |
| BstC8I | GCNNGC | 2 cut(s) | 352, 685 |
| BstDEI | CTNAG | 3 cut(s) | 771, 792, 1277 |
| BstDSI | CCRYGG | 3 cut(s) | 169, 1234, 1433 |
| BstF5I | GGATG | 2 cut(s) | 931, 1096 |
| BstH2I | RGCGCY | 1 cut(s) | 684 |
| BstHHI | GCGC | 1 cut(s) | 683 |
| BstKTI | GATC | 4 cut(s) | 540, 581, 943, 1399 |
| BstMAI | GTCTC | 1 cut(s) | 974 |
| BstMBI | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| BstMCI | CGRYCG | 1 cut(s) | 706 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 776 |
| BstNI | CCWGG | 1 cut(s) | 1054 |
| BstSCI | CCNGG | 1 cut(s) | 1052 |
| BstSFI | CTRYAG | 3 cut(s) | 909, 1320, 1371 |
| BstSLI | GKGCMC | 1 cut(s) | 499 |
| BstV1I | GCAGC | 3 cut(s) | 58, 967, 1496 |
| BstX2I | RGATCY | 2 cut(s) | 578, 1396 |
| BstYI | RGATCY | 2 cut(s) | 578, 1396 |
| BsuRI | GGCC | 2 cut(s) | 739, 776 |
| BtgI | CCRYGG | 3 cut(s) | 169, 1234, 1433 |
| BtgZI | GCGATG | 1 cut(s) | 961 |
| BtsCI | GGATG | 2 cut(s) | 931, 1096 |
| BtsIMutI | CAGTG | 1 cut(s) | 1182 |
| Cac8I | GCNNGC | 2 cut(s) | 352, 685 |
| CfoI | GCGC | 1 cut(s) | 683 |
| Cfr13I | GGNCC | 2 cut(s) | 53, 643 |
| CseI | GACGC | 2 cut(s) | 1169, 1492 |
| Csp6I | GTAC | 3 cut(s) | 36, 516, 1383 |
| CviAII | CATG | 4 cut(s) | 170, 211, 727, 1434 |
| CviQI | GTAC | 3 cut(s) | 36, 516, 1383 |
| DdeI | CTNAG | 3 cut(s) | 771, 792, 1277 |
| DpnI | GATC | 4 cut(s) | 539, 580, 942, 1398 |
| DpnII | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1179 |
| EaeI | YGGCCR | 1 cut(s) | 737 |
| Eam1104I | CTCTTC | 1 cut(s) | 840 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1179 |
| EarI | CTCTTC | 1 cut(s) | 840 |
| EciI | GGCGGA | 2 cut(s) | 1270, 1495 |
| Eco130I | CCWWGG | 3 cut(s) | 169, 639, 1433 |
| Eco31I | GGTCTC | 1 cut(s) | 974 |
| Eco32I | GATATC | 1 cut(s) | 1264 |
| Eco47I | GGWCC | 2 cut(s) | 53, 643 |
| Eco57I | CTGAAG | 3 cut(s) | 530, 603, 1350 |
| Eco88I | CYCGRG | 1 cut(s) | 574 |
| EcoO109I | RGGNCCY | 2 cut(s) | 53, 643 |
| EcoRI | GAATTC | 1 cut(s) | 380 |
| EcoRII | CCWGG | 1 cut(s) | 1052 |
| EcoRV | GATATC | 1 cut(s) | 1264 |
| EcoT14I | CCWWGG | 3 cut(s) | 169, 639, 1433 |
| ErhI | CCWWGG | 3 cut(s) | 169, 639, 1433 |
| FaeI | CATG | 4 cut(s) | 173, 214, 730, 1437 |
| FaqI | GGGAC | 5 cut(s) | 629, 702, 848, 1010, 1507 |
| FatI | CATG | 4 cut(s) | 169, 210, 726, 1433 |
| FauI | CCCGC | 1 cut(s) | 66 |
| FauNDI | CATATG | 1 cut(s) | 880 |
| Fnu4HI | GCNGC | 5 cut(s) | 72, 777, 981, 1507, 1510 |
| FokI | GGATG | 2 cut(s) | 938, 1103 |
| Fsp4HI | GCNGC | 5 cut(s) | 72, 777, 981, 1507, 1510 |
| FspBI | CTAG | 4 cut(s) | 114, 423, 1125, 1151 |
| GlaI | GCGC | 1 cut(s) | 682 |
| GluI | GCNGC | 5 cut(s) | 72, 777, 981, 1507, 1510 |
| GsaI | CCCAGC | 1 cut(s) | 219 |
| GsuI | CTGGAG | 2 cut(s) | 627, 1467 |
| HaeII | RGCGCY | 1 cut(s) | 684 |
| HaeIII | GGCC | 2 cut(s) | 739, 776 |
| HapII | CCGG | 2 cut(s) | 78, 558 |
| HgaI | GACGC | 2 cut(s) | 1169, 1492 |
| HhaI | GCGC | 1 cut(s) | 683 |
| Hin1II | CATG | 4 cut(s) | 173, 214, 730, 1437 |
| Hin6I | GCGC | 1 cut(s) | 681 |
| HinP1I | GCGC | 1 cut(s) | 681 |
| HincII | GTYRAC | 1 cut(s) | 361 |
| HindII | GTYRAC | 1 cut(s) | 361 |
| HindIII | AAGCTT | 1 cut(s) | 673 |
| HinfI | GANTC | 6 cut(s) | 426, 479, 1203, 1275, 1294, 1353 |
| HpaII | CCGG | 2 cut(s) | 78, 558 |
| HphI | GGTGA | 2 cut(s) | 547, 631 |
| Hpy166II | GTNNAC | 3 cut(s) | 361, 1238, 1347 |
| Hpy188III | TCNNGA | 7 cut(s) | 135, 158, 385, 576, 606, 719, 1279 |
| Hpy8I | GTNNAC | 3 cut(s) | 361, 1238, 1347 |
| Hpy99I | CGWCG | 3 cut(s) | 1162, 1185, 1307 |
| HpyAV | CCTTC | 4 cut(s) | 61, 554, 884, 1325 |
| HpyCH4III | ACNGT | 5 cut(s) | 273, 327, 995, 1177, 1382 |
| HpyCH4IV | ACGT | 3 cut(s) | 1157, 1305, 1488 |
| HpyCH4V | TGCA | 7 cut(s) | 121, 126, 208, 305, 695, 1033, 1062 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 776 |
| HpyF3I | CTNAG | 3 cut(s) | 771, 792, 1277 |
| HpySE526I | ACGT | 3 cut(s) | 1157, 1305, 1488 |
| Hsp92II | CATG | 4 cut(s) | 173, 214, 730, 1437 |
| HspAI | GCGC | 1 cut(s) | 681 |
| Kzo9I | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| LmnI | GCTCC | 3 cut(s) | 246, 608, 1219 |
| Lsp1109I | GCAGC | 3 cut(s) | 58, 967, 1496 |
| LweI | GCATC | 1 cut(s) | 1081 |
| MaeI | CTAG | 4 cut(s) | 114, 423, 1125, 1151 |
| MaeII | ACGT | 3 cut(s) | 1157, 1305, 1488 |
| MaeIII | GTNAC | 3 cut(s) | 409, 652, 995 |
| MalI | GATC | 4 cut(s) | 539, 580, 942, 1398 |
| MboI | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| MboII | GAAGA | 5 cut(s) | 421, 532, 857, 1016, 1391 |
| MflI | RGATCY | 2 cut(s) | 578, 1396 |
| MhlI | GDGCHC | 4 cut(s) | 499, 772, 1023, 1216 |
| MlyI | GAGTC | 2 cut(s) | 1212, 1269 |
| MmeI | TCCRAC | 3 cut(s) | 424, 1140, 1429 |
| MnlI | CCTC | 9 cut(s) | 91, 180, 835, 841, 868, 994, 1058, 1303, 1426 |
| MseI | TTAA | 4 cut(s) | 24, 198, 474, 1071 |
| MspA1I | CMGCKG | 3 cut(s) | 779, 947, 1509 |
| MspI | CCGG | 2 cut(s) | 78, 558 |
| MspR9I | CCNGG | 1 cut(s) | 1054 |
| Mva1269I | GAATGC | 1 cut(s) | 748 |
| MvaI | CCWGG | 1 cut(s) | 1054 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 776 |
| NcoI | CCATGG | 2 cut(s) | 169, 1433 |
| NdeI | CATATG | 1 cut(s) | 880 |
| NdeII | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| NlaIII | CATG | 4 cut(s) | 173, 214, 730, 1437 |
| NlaIV | GGNNCC | 4 cut(s) | 55, 270, 496, 645 |
| NmuCI | GTSAC | 2 cut(s) | 409, 995 |
| PaeR7I | CTCGAG | 1 cut(s) | 574 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1203 |
| PctI | GAATGC | 1 cut(s) | 748 |
| PfeI | GAWTC | 4 cut(s) | 426, 479, 1294, 1353 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1392 |
| PkrI | GCNGC | 5 cut(s) | 73, 778, 982, 1508, 1511 |
| PleI | GAGTC | 2 cut(s) | 1211, 1269 |
| PpsI | GAGTC | 2 cut(s) | 1211, 1269 |
| Ppu21I | YACGTR | 1 cut(s) | 1489 |
| PpuMI | RGGWCCY | 2 cut(s) | 53, 643 |
| PsiI | TTATAA | 1 cut(s) | 662 |
| Psp5II | RGGWCCY | 2 cut(s) | 53, 643 |
| Psp6I | CCWGG | 1 cut(s) | 1052 |
| PspFI | CCCAGC | 1 cut(s) | 215 |
| PspGI | CCWGG | 1 cut(s) | 1052 |
| PspN4I | GGNNCC | 4 cut(s) | 55, 270, 496, 645 |
| PspPI | GGNCC | 2 cut(s) | 53, 643 |
| PspPPI | RGGWCCY | 2 cut(s) | 53, 643 |
| PsuI | RGATCY | 2 cut(s) | 578, 1396 |
| PvuII | CAGCTG | 2 cut(s) | 947, 1509 |
| RsaI | GTAC | 3 cut(s) | 37, 517, 1384 |
| RsaNI | GTAC | 3 cut(s) | 36, 516, 1383 |
| SaqAI | TTAA | 4 cut(s) | 24, 198, 474, 1071 |
| SatI | GCNGC | 5 cut(s) | 72, 777, 981, 1507, 1510 |
| Sau3AI | GATC | 4 cut(s) | 537, 578, 940, 1396 |
| Sau96I | GGNCC | 2 cut(s) | 53, 643 |
| SchI | GAGTC | 2 cut(s) | 1212, 1269 |
| ScrFI | CCNGG | 1 cut(s) | 1054 |
| SduI | GDGCHC | 4 cut(s) | 499, 772, 1023, 1216 |
| SfaNI | GCATC | 1 cut(s) | 1081 |
| SfcI | CTRYAG | 3 cut(s) | 909, 1320, 1371 |
| Sfr274I | CTCGAG | 1 cut(s) | 574 |
| SinI | GGWCC | 2 cut(s) | 53, 643 |
| SlaI | CTCGAG | 1 cut(s) | 574 |
| SmlI | CTYRAG | 2 cut(s) | 156, 574 |
| SmoI | CTYRAG | 2 cut(s) | 156, 574 |
| SsiI | CCGC | 6 cut(s) | 59, 244, 702, 777, 1255, 1480 |
| SspI | AATATT | 2 cut(s) | 193, 529 |
| SspMI | CTAG | 4 cut(s) | 114, 423, 1125, 1151 |
| StyD4I | CCNGG | 1 cut(s) | 1052 |
| StyI | CCWWGG | 3 cut(s) | 169, 639, 1433 |
| TaaI | ACNGT | 5 cut(s) | 273, 327, 995, 1177, 1382 |
| TaiI | ACGT | 3 cut(s) | 1160, 1308, 1491 |
| TaqI | TCGA | 4 cut(s) | 575, 1111, 1197, 1302 |
| TatI | WGTACW | 1 cut(s) | 515 |
| TauI | GCSGC | 1 cut(s) | 779 |
| TfiI | GAWTC | 4 cut(s) | 426, 479, 1294, 1353 |
| Tru1I | TTAA | 4 cut(s) | 24, 198, 474, 1071 |
| Tru9I | TTAA | 4 cut(s) | 24, 198, 474, 1071 |
| TscAI | CASTG | 1 cut(s) | 1182 |
| TseFI | GTSAC | 2 cut(s) | 409, 995 |
| TseI | GCWGC | 4 cut(s) | 71, 980, 1506, 1509 |
| Tsp45I | GTSAC | 2 cut(s) | 409, 995 |
| TspDTI | ATGAA | 9 cut(s) | 24, 177, 393, 492, 493, 715, 1004, 1415, 1473 |
| TspGWI | ACGGA | 1 cut(s) | 378 |
| TspRI | CASTG | 1 cut(s) | 1182 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1392 |
| VpaK11BI | GGWCC | 2 cut(s) | 53, 643 |
| XapI | RAATTY | 2 cut(s) | 371, 380 |
| XhoI | CTCGAG | 1 cut(s) | 574 |
| XspI | CTAG | 4 cut(s) | 114, 423, 1125, 1151 |