Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006683.1

Orthogroup ID

OG0002822

Physical Location & Seq

Genomic Coordinates Reverse (-)

58197 .. 63093

Gene Structure 4897 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006683.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

atgcttaggattttggcgaagagaggagccttaggttcatggaggtcagtgagcgcagtacagataacgagggattacagcctcggagtgctgcccgatggagttgatcggaattccgaggccttttctcggaattctaaggacatgggtctcttaatctccgacctccaatcccacatccaaaaggttctcgctggaggaggacctggagctgtgaagagaaacaagagcaggaacaagctccttcctcgagaacgcattgatcgcttgcttgatcctggtgcttctttccttgagctttctcagcttgcagggcatgaactgtatgaagacacattaccatctggtgggataattactggaattggtcctgtccatgggaggctctgtatgtttgtggctaatgatcctactgttaagggtgggacttattatcccatcactgttaagaaacacctcagggcgcaagaaattgctgctcgatgcaagttaccatgtgtgtatcttgttgatagcggaggggcttttcttcccaaacaggcggaggtgtttcctgacagggagaattttggtagaatcttttacaatcaagctgtaatgtcagccgaaggtattcctcaaattgcgctggtattgggctcctgcactgctggcggtgcgtatattcctgcaatggctgatgaaagtgtgatggtcaagggaaatggtaccatatttctagcaggacccccgcttgtgaaggctgccaccggagaagttgtatcggcagaggatttggggggtgctagtgtgcattgcaagacttcgggagtgtcagattattttgctcaagatgaactccatggacttactcttgggaggaatattattaagaacttgcacatggctgggaaacagggtttgaaaagcgaattgcggagcataagttccgaatataaggaaccattatttgatgtaaaggaactccgttccattgcaccaacagaccataagcaacagtttgatattcgttcagttattgctcgcattgttgatggaagcgaatttgatgaattcaagaaattgtatggcactactcttgtgacaggttttgctagaatcttcggacagcctgttggaattattggaaacaatgggatattatttaatgagtctgctctaaaaggggcccacttcattgaattatgtactcaacgaaatattcctttggtcttccttcagaacatcaccggatttatggttggctcgagatctgaagcaaatggaatagcaaaatctggagcaaaaatggtgatggcagtttcttgtgccaaggtccccaaagttactattataattggtggaagctttggcgctggcaattatgcaatgtgcggtcgtgcttatagtcccgatttcatgttcctttggccgaatgccaaaatatctgtgatgggtggtgctcaggccgctggtgtccttgctcagatagaaagaagcaacaagaaaaaacaaggaattgagtgggacaaggaggaagaggaaaagttcaaggcaaaggtagttgaggcatatgagaaagaaggaaactcttattactctacagcaaggctctgggatgatgggattattgatccagctgacaccagaaaagtcataggtctctctatcgctgcctctatgaaccgtgacccagaagaaaccaagtttggtgtattccgaatcaacgtcggatttgctgacgatagtgcgtcggcgaatgggttcgatggagtcatctgcgctcctaaagatgatgattgccgtggactggcattattttggcagaatgataccctagttagactcaggaactactctgcgaatcacattgacgtagaggttggggctgtagggtctgaaggtgttttcatgtttacaggaatctatggagtagctactacagcgaaccgtaccatcacttgggatcttctccgactgttagcctctcaacttcatattccatggttggtagctggatatttcaatgaagttctctgccatgctgacaaattaggcgggcttgccaaacagttcaatagagacaagtatccgttctccagggttatcacactcccctttagccaatctgaccattgtcccattttaattgagatcaatccggaaccaattccaaggcatcgaagacctaggtcttttaaatttgaggagatgtggctaccacacccggactgtgctaaggtagttgaacgagggtggatgctccctacttctggagactccatgcagcaatttggcagaaagattaaacataccggctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006520 GO:0006551 GO:0006552 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009987 GO:0016054 GO:0019752 GO:0031974 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046872 GO:0046914 GO:0050897 GO:0070013 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00280 ko01100 map00280 map01100

Pfam Domains

Protein Families

Carboxyl_trans

Protein Analysis

766

Amino Acids

83.68

Weight (kDa)

8.59

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34030
fragaria_vesca	FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870
malus_domestica	MD05G1082300.v1.1
prunus_persica	Prupe.8G126800_v2.0.a1
pyrus_communis	pycom05g07710 pycom05g07720
rosa_chinensis	RchiOBHm_Chr6g0257681 RchiOBHm_Chr6g0257701
rosa_laevigata	RLG00000014716 RLG00000014717
rosa_multiflora	Rmu_sc0000916.1_g000002 Rmu_sc0006683.1_g000009 Rmu_sc0006683.1_g000013 Rmu_sc0006683.1_g000018 Rmu_sc0011315.1_g000001 Rmu_sc0011315.1_g000004 Rmu_sc0026590.1_g000002
rosa_roxburghii	Rroxscaffold_7G00208880 Rroxscaffold_7G00208890
rosa_rugosa	Rorug05G0568900 Rorug05G0569000 Rorug05G0569100 Rorug05G0569200 Rorug05G0569300
rosa_samantha	Rh6AG085700 Rh6AG086000 Rh6BG080000 Rh6BG080100 Rh6CG075000 Rh6CG075100 Rh6DG071900 Rh6DG072000
rosa_wichuraiana	Rw6G007690 Rw6G007700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1334
Acc65I	GGTACC	1 cut(s)	707
AccB1I	GGYRCC	1 cut(s)	707
AccB7I	CCANNNNNTGG	2 cut(s)	347, 1941
AccIII	TCCGGA	1 cut(s)	2140
AciI	CCGC	8 cut(s)	516, 542, 654, 731, 916, 1374, 1449, 2037
AclWI	GGATC	4 cut(s)	269, 401, 1607, 1953
AcoI	YGGCCR	1 cut(s)	1409
AcsI	RAATTY	6 cut(s)	112, 133, 565, 1043, 1052, 2180
AcuI	CTGAAG	3 cut(s)	1202, 1275, 1899
AfaI	GTAC	4 cut(s)	60, 709, 1189, 1933
AfiI	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1789, 1941, 2252
AgsI	TTSAA	7 cut(s)	904, 1057, 1181, 1531, 2005, 2056, 2228
AjnI	CCWGG	3 cut(s)	205, 277, 2078
AjuI	GAANNNNNNNTTGG	2 cut(s)	1671, 1703
AloI	GAACNNNNNNTCC	2 cut(s)	910, 942
AluBI	AGCT	9 cut(s)	212, 241, 298, 307, 593, 1347, 1619, 1916, 1994
AluI	AGCT	9 cut(s)	212, 241, 298, 307, 593, 1347, 1619, 1916, 1994
Alw21I	GWGCWC	1 cut(s)	1444
Alw26I	GTCTC	4 cut(s)	155, 1646, 2055, 2250
AlwI	GGATC	4 cut(s)	269, 401, 1607, 1953
Ama87I	CYCGRG	2 cut(s)	249, 1246
Aor13HI	TCCGGA	1 cut(s)	2140
AoxI	GGCC	4 cut(s)	120, 1167, 1409, 1446
ApaI	GGGCCC	1 cut(s)	1171
ApeKI	GCWGC	5 cut(s)	91, 476, 743, 1652, 2266
ApoI	RAATTY	6 cut(s)	112, 133, 565, 1043, 1052, 2180
Asp700I	GAANNNNTTC	3 cut(s)	612, 1742, 2148
Asp718I	GGTACC	1 cut(s)	707
AspA2I	CCTAGG	1 cut(s)	2168
AspLEI	GCGC	5 cut(s)	56, 466, 628, 1355, 1763
AspS9I	GGNCC	6 cut(s)	203, 368, 725, 1167, 1168, 1315
AsuC2I	CCSGG	1 cut(s)	2207
AsuHPI	GGTGA	2 cut(s)	1219, 1303
AvaI	CYCGRG	2 cut(s)	249, 1246
AvaII	GGWCC	4 cut(s)	203, 368, 725, 1315
AvrII	CCTAGG	1 cut(s)	2168
AxyI	CCTNAGG	2 cut(s)	31, 458
BaeGI	GKGCMC	1 cut(s)	1171
BaeI	ACNNNNGTAYC	2 cut(s)	1803, 1836
BanI	GGYRCC	1 cut(s)	707
BanII	GRGCYC	2 cut(s)	641, 1171
BarI	GAAGNNNNNNTAC	2 cut(s)	321, 353
BbsI	GAAGAC	3 cut(s)	336, 1204, 2170
Bbv12I	GWGCWC	1 cut(s)	1444
BbvI	GCAGC	5 cut(s)	78, 463, 730, 1639, 2278
BceAI	ACGGC	1 cut(s)	1767
BciT130I	CCWGG	3 cut(s)	207, 279, 2080
BciVI	GTATCC	1 cut(s)	2079
BcnI	CCSGG	1 cut(s)	2207
BcoDI	GTCTC	4 cut(s)	155, 1646, 2055, 2250
BfaI	CTAG	5 cut(s)	719, 786, 1095, 1817, 2169
BfmI	CTRYAG	3 cut(s)	1581, 1869, 1920
BfoI	RGCGCY	1 cut(s)	1356
BfuI	GTATCC	1 cut(s)	2079
BglII	AGATCT	1 cut(s)	1250
BisI	GCNGC	6 cut(s)	92, 477, 744, 1449, 1653, 2267
BlnI	CCTAGG	1 cut(s)	2168
BlsI	GCNGC	6 cut(s)	93, 478, 745, 1450, 1654, 2268
Bme1390I	CCNGG	4 cut(s)	207, 279, 2080, 2207
Bme18I	GGWCC	4 cut(s)	203, 368, 725, 1315
BmeT110I	CYCGRG	2 cut(s)	249, 1246
BmgT120I	GGNCC	6 cut(s)	203, 368, 725, 1167, 1168, 1315
BmiI	GGNNCC	9 cut(s)	28, 640, 709, 727, 942, 1168, 1169, 1317, 2145
BmrFI	CCNGG	4 cut(s)	207, 279, 2080, 2207
BmsI	GCATC	3 cut(s)	473, 2167, 2229
BoxI	GACNNNNGTC	3 cut(s)	147, 2115, 2170
BpiI	GAAGAC	3 cut(s)	336, 1204, 2170
BpmI	CTGGAG	5 cut(s)	216, 228, 1299, 2062, 2274
Bpu10I	CCTNAGC	3 cut(s)	5, 1443, 2217
BpuEI	CTTGAG	2 cut(s)	314, 813
BpuMI	CCSGG	1 cut(s)	2207
BsaI	GGTCTC	2 cut(s)	155, 1646
BsaWI	WCCGGW	3 cut(s)	749, 1229, 2140
BsaXI	ACNNNNNCTCC	6 cut(s)	373, 403, 744, 774, 910, 940
Bsc4I	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1789, 1941, 2252
Bse118I	RCCGGY	1 cut(s)	2294
Bse1I	ACTGG	2 cut(s)	364, 1794
Bse21I	CCTNAGG	2 cut(s)	31, 458
Bse3DI	GCAATG	4 cut(s)	678, 793, 972, 1374
BseAI	TCCGGA	1 cut(s)	2140
BseBI	CCWGG	3 cut(s)	207, 279, 2080
BseGI	GGATG	3 cut(s)	177, 1603, 2244
BseLI	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1789, 1941, 2252
BseMI	GCAATG	4 cut(s)	678, 793, 972, 1374
BseMII	CTCAG	5 cut(s)	317, 472, 1457, 1478, 1840
BseNI	ACTGG	2 cut(s)	364, 1794
BseRI	GAGGAG	3 cut(s)	39, 213, 2201
BseSI	GKGCMC	1 cut(s)	1171
BseXI	GCAGC	5 cut(s)	78, 463, 730, 1639, 2278
BseYI	CCCAGC	1 cut(s)	887
BsgI	GTGCAG	1 cut(s)	628
Bsh1285I	CGRYCG	1 cut(s)	1378
BshFI	GGCC	4 cut(s)	122, 1169, 1411, 1448
BshNI	GGYRCC	1 cut(s)	707
BsiEI	CGRYCG	1 cut(s)	1378
BsiHKAI	GWGCWC	1 cut(s)	1444
BsiHKCI	CYCGRG	2 cut(s)	249, 1246
BsiSI	CCGG	5 cut(s)	750, 1230, 2141, 2207, 2295
BslFI	GGGAC	5 cut(s)	439, 1301, 1374, 1520, 2103
BslI	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1789, 1941, 2252
BsmAI	GTCTC	4 cut(s)	155, 1646, 2055, 2250
BsmFI	GGGAC	5 cut(s)	439, 1301, 1374, 1520, 2103
BsmI	GAATGC	1 cut(s)	1420
BsnI	GGCC	4 cut(s)	122, 1169, 1411, 1448
Bso31I	GGTCTC	2 cut(s)	155, 1646
BsoBI	CYCGRG	2 cut(s)	249, 1246
Bsp120I	GGGCCC	1 cut(s)	1167
Bsp1286I	GDGCHC	3 cut(s)	641, 1171, 1444
Bsp13I	TCCGGA	1 cut(s)	2140
Bsp143I	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
Bsp19I	CCATGG	3 cut(s)	376, 841, 1982
BspACI	CCGC	8 cut(s)	516, 542, 654, 731, 916, 1374, 1449, 2037
BspANI	GGCC	4 cut(s)	122, 1169, 1411, 1448
BspCNI	CTCAG	5 cut(s)	316, 471, 1456, 1477, 1839
BspEI	TCCGGA	1 cut(s)	2140
BspLI	GGNNCC	9 cut(s)	28, 640, 709, 727, 942, 1168, 1169, 1317, 2145
BspPI	GGATC	4 cut(s)	269, 401, 1607, 1953
BspT107I	GGYRCC	1 cut(s)	707
BspTNI	GGTCTC	2 cut(s)	155, 1646
BsrDI	GCAATG	4 cut(s)	678, 793, 972, 1374
BsrFI	RCCGGY	1 cut(s)	2294
BsrI	ACTGG	2 cut(s)	364, 1794
BssAI	RCCGGY	1 cut(s)	2294
BssMI	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
BssT1I	CCWWGG	6 cut(s)	376, 841, 1311, 1982, 2153, 2168
Bst2UI	CCWGG	3 cut(s)	207, 279, 2080
Bst4CI	ACNGT	9 cut(s)	324, 415, 445, 999, 1667, 1931, 1959, 2052, 2213
Bst6I	CTCTTC	3 cut(s)	14, 212, 1512
BstC8I	GCNNGC	7 cut(s)	269, 309, 652, 1024, 1357, 2039, 2043
BstDEI	CTNAG	9 cut(s)	5, 31, 138, 303, 458, 1443, 1464, 1826, 2217
BstDSI	CCRYGG	4 cut(s)	376, 841, 1783, 1982
BstF5I	GGATG	3 cut(s)	177, 1603, 2244
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	5 cut(s)	56, 466, 628, 1355, 1763
BstKTI	GATC	8 cut(s)	109, 265, 277, 409, 1253, 1615, 1948, 2136
BstMAI	GTCTC	4 cut(s)	155, 1646, 2055, 2250
BstMBI	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
BstMCI	CGRYCG	1 cut(s)	1378
BstMWI	GCNNNNNNNGC	7 cut(s)	264, 304, 313, 651, 656, 1448, 1922
BstNI	CCWGG	3 cut(s)	207, 279, 2080
BstPAI	GACNNNNGTC	3 cut(s)	147, 2115, 2170
BstSCI	CCNGG	4 cut(s)	205, 277, 2078, 2205
BstSFI	CTRYAG	3 cut(s)	1581, 1869, 1920
BstSLI	GKGCMC	1 cut(s)	1171
BstV1I	GCAGC	5 cut(s)	78, 463, 730, 1639, 2278
BstV2I	GAAGAC	3 cut(s)	336, 1204, 2170
BstX2I	RGATCY	2 cut(s)	1250, 1945
BstYI	RGATCY	2 cut(s)	1250, 1945
Bsu36I	CCTNAGG	2 cut(s)	31, 458
BsuI	GTATCC	1 cut(s)	2079
BsuRI	GGCC	4 cut(s)	122, 1169, 1411, 1448
BtgI	CCRYGG	4 cut(s)	376, 841, 1783, 1982
BtsCI	GGATG	3 cut(s)	177, 1603, 2244
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	3 cut(s)	54, 441, 645
Cac8I	GCNNGC	7 cut(s)	269, 309, 652, 1024, 1357, 2039, 2043
CfoI	GCGC	5 cut(s)	56, 466, 628, 1355, 1763
Cfr10I	RCCGGY	1 cut(s)	2294
Cfr13I	GGNCC	6 cut(s)	203, 368, 725, 1167, 1168, 1315
CseI	GACGC	1 cut(s)	1719
Csp6I	GTAC	4 cut(s)	59, 708, 1188, 1932
CviQI	GTAC	4 cut(s)	59, 708, 1188, 1932
DdeI	CTNAG	9 cut(s)	5, 31, 138, 303, 458, 1443, 1464, 1826, 2217
DpnI	GATC	8 cut(s)	108, 264, 276, 408, 1252, 1614, 1947, 2135
DpnII	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
DraI	TTTAAA	1 cut(s)	2179
EaeI	YGGCCR	1 cut(s)	1409
Eam1104I	CTCTTC	3 cut(s)	14, 212, 1512
EarI	CTCTTC	3 cut(s)	14, 212, 1512
EciI	GGCGGA	1 cut(s)	557
Eco130I	CCWWGG	6 cut(s)	376, 841, 1311, 1982, 2153, 2168
Eco147I	AGGCCT	1 cut(s)	122
Eco24I	GRGCYC	2 cut(s)	641, 1171
Eco31I	GGTCTC	2 cut(s)	155, 1646
Eco47I	GGWCC	4 cut(s)	203, 368, 725, 1315
Eco57I	CTGAAG	3 cut(s)	1202, 1275, 1899
Eco81I	CCTNAGG	2 cut(s)	31, 458
Eco88I	CYCGRG	2 cut(s)	249, 1246
EcoO109I	RGGNCCY	4 cut(s)	203, 725, 1167, 1315
EcoRI	GAATTC	3 cut(s)	112, 133, 1052
EcoRII	CCWGG	3 cut(s)	205, 277, 2078
EcoT14I	CCWWGG	6 cut(s)	376, 841, 1311, 1982, 2153, 2168
EcoT38I	GRGCYC	2 cut(s)	641, 1171
ErhI	CCWWGG	6 cut(s)	376, 841, 1311, 1982, 2153, 2168
FaqI	GGGAC	5 cut(s)	439, 1301, 1374, 1520, 2103
FauI	CCCGC	2 cut(s)	738, 2030
FauNDI	CATATG	1 cut(s)	1552
Fnu4HI	GCNGC	6 cut(s)	92, 477, 744, 1449, 1653, 2267
FokI	GGATG	3 cut(s)	164, 1610, 2251
FriOI	GRGCYC	2 cut(s)	641, 1171
Fsp4HI	GCNGC	6 cut(s)	92, 477, 744, 1449, 1653, 2267
FspBI	CTAG	5 cut(s)	719, 786, 1095, 1817, 2169
GlaI	GCGC	5 cut(s)	55, 465, 627, 1354, 1762
GluI	GCNGC	6 cut(s)	92, 477, 744, 1449, 1653, 2267
GsaI	CCCAGC	1 cut(s)	891
GsuI	CTGGAG	5 cut(s)	216, 228, 1299, 2062, 2274
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	4 cut(s)	122, 1169, 1411, 1448
HapII	CCGG	5 cut(s)	750, 1230, 2141, 2207, 2295
HgaI	GACGC	1 cut(s)	1719
HhaI	GCGC	5 cut(s)	56, 466, 628, 1355, 1763
Hin6I	GCGC	5 cut(s)	54, 464, 626, 1353, 1761
HinP1I	GCGC	5 cut(s)	54, 464, 626, 1353, 1761
HindIII	AAGCTT	1 cut(s)	1345
HinfI	GANTC	9 cut(s)	576, 1098, 1151, 1701, 1752, 1824, 1843, 1902, 2258
HpaII	CCGG	5 cut(s)	750, 1230, 2141, 2207, 2295
HphI	GGTGA	2 cut(s)	1219, 1303
Hpy166II	GTNNAC	2 cut(s)	1787, 1896
Hpy8I	GTNNAC	2 cut(s)	1787, 1896
Hpy99I	CGWCG	2 cut(s)	1712, 1735
HpyAV	CCTTC	6 cut(s)	254, 602, 733, 1226, 1556, 1874
HpyCH4III	ACNGT	9 cut(s)	324, 415, 445, 999, 1667, 1931, 1959, 2052, 2213
HpyCH4IV	ACGT	2 cut(s)	1707, 1854
HpyF10VI	GCNNNNNNNGC	7 cut(s)	264, 304, 313, 651, 656, 1448, 1922
HpyF3I	CTNAG	9 cut(s)	5, 31, 138, 303, 458, 1443, 1464, 1826, 2217
HpySE526I	ACGT	2 cut(s)	1707, 1854
HspAI	GCGC	5 cut(s)	54, 464, 626, 1353, 1761
Kpn2I	TCCGGA	1 cut(s)	2140
KpnI	GGTACC	1 cut(s)	711
Kzo9I	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
LmnI	GCTCC	8 cut(s)	26, 209, 246, 644, 918, 1280, 1768, 2247
Lsp1109I	GCAGC	5 cut(s)	78, 463, 730, 1639, 2278
LweI	GCATC	3 cut(s)	473, 2167, 2229
MaeI	CTAG	5 cut(s)	719, 786, 1095, 1817, 2169
MaeII	ACGT	2 cut(s)	1707, 1854
MaeIII	GTNAC	4 cut(s)	489, 1081, 1324, 1667
MalI	GATC	8 cut(s)	108, 264, 276, 408, 1252, 1614, 1947, 2135
MboI	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
MflI	RGATCY	2 cut(s)	1250, 1945
MhlI	GDGCHC	3 cut(s)	641, 1171, 1444
MlyI	GAGTC	4 cut(s)	1160, 1761, 1818, 2252
MmeI	TCCRAC	4 cut(s)	186, 1096, 1690, 1978
MroI	TCCGGA	1 cut(s)	2140
MroXI	GAANNNNTTC	3 cut(s)	612, 1742, 2148
MseI	TTAA	8 cut(s)	155, 417, 447, 870, 1146, 2126, 2178, 2286
MspA1I	CMGCKG	2 cut(s)	1451, 1619
MspI	CCGG	5 cut(s)	750, 1230, 2141, 2207, 2295
MspR9I	CCNGG	4 cut(s)	207, 279, 2080, 2207
Mva1269I	GAATGC	1 cut(s)	1420
MvaI	CCWGG	3 cut(s)	207, 279, 2080
MwoI	GCNNNNNNNGC	7 cut(s)	264, 304, 313, 651, 656, 1448, 1922
NciI	CCSGG	1 cut(s)	2207
NcoI	CCATGG	3 cut(s)	376, 841, 1982
NdeI	CATATG	1 cut(s)	1552
NdeII	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
NlaIV	GGNNCC	9 cut(s)	28, 640, 709, 727, 942, 1168, 1169, 1317, 2145
NmuCI	GTSAC	2 cut(s)	1081, 1667
PaeR7I	CTCGAG	2 cut(s)	249, 1246
PceI	AGGCCT	1 cut(s)	122
PctI	GAATGC	1 cut(s)	1420
PdmI	GAANNNNTTC	3 cut(s)	612, 1742, 2148
PfeI	GAWTC	5 cut(s)	576, 1098, 1701, 1843, 1902
PflMI	CCANNNNNTGG	2 cut(s)	347, 1941
PkrI	GCNGC	6 cut(s)	93, 478, 745, 1450, 1654, 2268
PleI	GAGTC	4 cut(s)	1159, 1760, 1818, 2252
PpsI	GAGTC	4 cut(s)	1159, 1760, 1818, 2252
PpuMI	RGGWCCY	3 cut(s)	203, 725, 1315
PshAI	GACNNNNGTC	3 cut(s)	147, 2115, 2170
PsiI	TTATAA	1 cut(s)	1334
Psp5II	RGGWCCY	3 cut(s)	203, 725, 1315
Psp6I	CCWGG	3 cut(s)	205, 277, 2078
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	3 cut(s)	205, 277, 2078
PspN4I	GGNNCC	9 cut(s)	28, 640, 709, 727, 942, 1168, 1169, 1317, 2145
PspOMI	GGGCCC	1 cut(s)	1167
PspPI	GGNCC	6 cut(s)	203, 368, 725, 1167, 1168, 1315
PspPPI	RGGWCCY	3 cut(s)	203, 725, 1315
PsuI	RGATCY	2 cut(s)	1250, 1945
PvuII	CAGCTG	1 cut(s)	1619
RsaI	GTAC	4 cut(s)	60, 709, 1189, 1933
RsaNI	GTAC	4 cut(s)	59, 708, 1188, 1932
SaqAI	TTAA	8 cut(s)	155, 417, 447, 870, 1146, 2126, 2178, 2286
SatI	GCNGC	6 cut(s)	92, 477, 744, 1449, 1653, 2267
Sau3AI	GATC	8 cut(s)	106, 262, 274, 406, 1250, 1612, 1945, 2133
Sau96I	GGNCC	6 cut(s)	203, 368, 725, 1167, 1168, 1315
SchI	GAGTC	4 cut(s)	1160, 1761, 1818, 2252
ScrFI	CCNGG	4 cut(s)	207, 279, 2080, 2207
SduI	GDGCHC	3 cut(s)	641, 1171, 1444
SfaNI	GCATC	3 cut(s)	473, 2167, 2229
SfcI	CTRYAG	3 cut(s)	1581, 1869, 1920
Sfr274I	CTCGAG	2 cut(s)	249, 1246
SinI	GGWCC	4 cut(s)	203, 368, 725, 1315
SlaI	CTCGAG	2 cut(s)	249, 1246
SmlI	CTYRAG	4 cut(s)	249, 293, 828, 1246
SmoI	CTYRAG	4 cut(s)	249, 293, 828, 1246
SseBI	AGGCCT	1 cut(s)	122
SsiI	CCGC	8 cut(s)	516, 542, 654, 731, 916, 1374, 1449, 2037
SspI	AATATT	2 cut(s)	865, 1201
SspMI	CTAG	5 cut(s)	719, 786, 1095, 1817, 2169
StuI	AGGCCT	1 cut(s)	122
StyD4I	CCNGG	4 cut(s)	205, 277, 2078, 2205
StyI	CCWWGG	6 cut(s)	376, 841, 1311, 1982, 2153, 2168
TaaI	ACNGT	9 cut(s)	324, 415, 445, 999, 1667, 1931, 1959, 2052, 2213
TaiI	ACGT	2 cut(s)	1710, 1857
TaqI	TCGA	5 cut(s)	250, 481, 1247, 1746, 2161
TatI	WGTACW	2 cut(s)	58, 1187
TauI	GCSGC	1 cut(s)	1451
TfiI	GAWTC	5 cut(s)	576, 1098, 1701, 1843, 1902
Tru1I	TTAA	8 cut(s)	155, 417, 447, 870, 1146, 2126, 2178, 2286
Tru9I	TTAA	8 cut(s)	155, 417, 447, 870, 1146, 2126, 2178, 2286
TscAI	CASTG	3 cut(s)	54, 448, 652
TseFI	GTSAC	2 cut(s)	1081, 1667
TseI	GCWGC	5 cut(s)	91, 476, 743, 1652, 2266
Tsp45I	GTSAC	2 cut(s)	1081, 1667
TspGWI	ACGGA	2 cut(s)	956, 2061
TspRI	CASTG	3 cut(s)	54, 448, 652
Van91I	CCANNNNNTGG	2 cut(s)	347, 1941
VpaK11BI	GGWCC	4 cut(s)	203, 368, 725, 1315
XapI	RAATTY	6 cut(s)	112, 133, 565, 1043, 1052, 2180
XhoI	CTCGAG	2 cut(s)	249, 1246
XmaJI	CCTAGG	1 cut(s)	2168
XmnI	GAANNNNTTC	3 cut(s)	612, 1742, 2148
XspI	CTAG	5 cut(s)	719, 786, 1095, 1817, 2169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.