Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002822

Physical Location & Seq

Genomic Coordinates Reverse (-)

76217567 .. 76219219

Gene Structure 1653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0568900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGCCTCGGTTCCGAGGTCACAAGGCCTCCCATTCCAGATCTACTTCTTCTCCTTCTGGACTTGGTTATGACGTGTTCCTCAGCTTCAGAGGTGAAGACACCCGAAAGAACTTCACTGATCACCTCTACACGGCCCTTGTCAACGCCGACGTTCGAACTTTCCGGGATGACCCTGAACTCGAGAGAGGGGAGAATATCCGTGAAGAACTAGAGAAAGCCATTCGAGAGTCGCGAAGTTCTGTGATTGTGTTTTCGAGAGATTACACCTCTTCCCCATGGTGTCTGGAGGAGCTTGTCATGATCCTTGAACGCAAGAGGACCTCCGATCATGTCGTGTTACCGGTGTTCTACGACGTTAATCCATCTCAACTGAGGATGCAGGCAGAAACTCTTTCAGAGCATCCTAAATACCAAGAAAATCAATGGTCGGAGAAGTTGAATGGATGGCGGGCAGCACTTCGAGAAGTTAAAGGTCTAGCAGGCATGGTGTTAGAAAATGAAGCTGACGGGCACGAGTCAAAGTTCATCCAAAAGATTGTTACAGTGATTCAAGACAAGCTATATCGAGTGGTTGATTCTCTCTCTGCAACTGCAGATAGAGAGATTCAAAAAAAGCTATACAACTTGGTTGATTCTCTCTCTGCAACTGCAGATAGAGAGATTCAAAAAAAGCTATACAACTTGGATGATTCTCTCTCTGCAACTGCAGATCACAACTCCTCATGGCTTTCTCCTTCTGGTGATTTTGCCTTTGGATTTCGCCAACTTGAAAACAGTGAGTATTTCTTGCTTTCTATATGGTTTGCCAAGATACCAGACAGAACCATTGTTTGGTACGCAAATGGAGATAGGCCTGCACCTAAGGGATCAATTGTGAAATTGACTTCCAGCAGTGGATTAGTGCTTACAACTCCTCAGGGTGAACAGCTATGGAAGTCTGATCTAACCATTGCTGGTGTTGTTGCTAATGGGGCTATGAATGATGAAGGTAACTTTATTCTGGAAGATGCGGAGTCAGGAAAGTTATGGGAGACATTCAAGAATCCTACTGATACCATGTTGCCTGGGCAGATAATGGAAAGAGGAGGGAGACTTTCTTCTCGAAAATCAGAGACTAACTATGCAAGAGGACGCTTCCAGATAGATTTTCAAGAAGATGGGAATCTTGTGTTTAGTGCCAGAAAACCTTTTTATTCTACTGCAACTACAACGGGGACTGTTAAAGGTAGTGAAGGTAAGCAGTTGGTTTTCGATGACTCTGGCAACTTCTATATTCTGCGAGTGAACCGTGGAAGATTCAAATTCACAGAGGAGGTACGCCCAGCAAGGGACTACTATCTCCGGTCAACTCTCAACTTTGATGGGGTTTTGACTCAATATTTTCTCCCAAAGTCTTCTGTTGACACTGTAAGCTGGAAACCACTTTGGTCAGAGCCAGATAACACTAGCAAGAGAACCCGCGCGATGCCGCGGGTAGTTTTCTTTCTATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006520 GO:0006551 GO:0006552 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009987 GO:0016054 GO:0019752 GO:0031974 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046872 GO:0046914 GO:0050897 GO:0070013 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00280 ko01100 map00280 map01100

Pfam Domains

Protein Families

Carboxyl_trans

Protein Analysis

497

Amino Acids

56.69

Weight (kDa)

6.45

Isoelectric Point (pI)

38.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	23 - 193	6.4e-42	TIR domain
TIR_2	PF13676	25 - 124	1.1e-17	TIR domain
B_lectin	PF01453	275 - 360	6.8e-13	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34030
fragaria_vesca	FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870
malus_domestica	MD05G1082300.v1.1
prunus_persica	Prupe.8G126800_v2.0.a1
pyrus_communis	pycom05g07710 pycom05g07720
rosa_chinensis	RchiOBHm_Chr6g0257681 RchiOBHm_Chr6g0257701
rosa_laevigata	RLG00000014716 RLG00000014717
rosa_multiflora	Rmu_sc0000916.1_g000002 Rmu_sc0006683.1_g000009 Rmu_sc0006683.1_g000013 Rmu_sc0006683.1_g000018 Rmu_sc0011315.1_g000001 Rmu_sc0011315.1_g000004 Rmu_sc0026590.1_g000002
rosa_roxburghii	Rroxscaffold_7G00208880 Rroxscaffold_7G00208890
rosa_rugosa	Rorug05G0568900 Rorug05G0569000 Rorug05G0569100 Rorug05G0569200 Rorug05G0569300
rosa_samantha	Rh6AG085700 Rh6AG086000 Rh6BG080000 Rh6BG080100 Rh6CG075000 Rh6CG075100 Rh6DG071900 Rh6DG072000
rosa_wichuraiana	Rw6G007690 Rw6G007700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	831
AccII	CGCG	4 cut(s)	232, 1461, 1463, 1471
AciI	CCGC	5 cut(s)	448, 1010, 1459, 1469, 1471
AclWI	GGATC	2 cut(s)	295, 874
AcsI	RAATTY	1 cut(s)	1301
AcuI	CTGAAG	1 cut(s)	70
AfaI	GTAC	2 cut(s)	836, 1317
AfiI	CCNNNNNNNGG	3 cut(s)	130, 831, 1327
AflIII	ACRYGT	1 cut(s)	72
AgeI	ACCGGT	1 cut(s)	340
AgsI	TTSAA	9 cut(s)	308, 439, 551, 608, 665, 770, 1039, 1151, 1300
AjiI	CACGTC	1 cut(s)	73
AjnI	CCWGG	1 cut(s)	1063
AjuI	GAANNNNNNNTTGG	2 cut(s)	814, 846
AluBI	AGCT	8 cut(s)	84, 292, 503, 559, 616, 673, 928, 1413
AluI	AGCT	8 cut(s)	84, 292, 503, 559, 616, 673, 928, 1413
Alw26I	GTCTC	3 cut(s)	1025, 1084, 1106
AlwI	GGATC	2 cut(s)	295, 874
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	3 cut(s)	24, 132, 851
ApeKI	GCWGC	1 cut(s)	452
ApoI	RAATTY	1 cut(s)	1301
AsiGI	ACCGGT	1 cut(s)	340
AspLEI	GCGC	1 cut(s)	1463
AspS9I	GGNCC	2 cut(s)	133, 318
AsuC2I	CCSGG	1 cut(s)	164
AsuHPI	GGTGA	4 cut(s)	104, 113, 752, 932
AsuII	TTCGAA	1 cut(s)	154
AvaI	CYCGRG	1 cut(s)	179
AvaII	GGWCC	1 cut(s)	318
AxyI	CCTNAGG	2 cut(s)	861, 915
BaeGI	GKGCMC	1 cut(s)	513
BauI	CACGAG	1 cut(s)	512
BbsI	GAAGAC	2 cut(s)	102, 1386
BbvCI	CCTCAGC	1 cut(s)	80
BbvI	GCAGC	1 cut(s)	464
BccI	CCATC	4 cut(s)	370, 438, 1151, 1355
BceAI	ACGGC	1 cut(s)	147
BciT130I	CCWGG	1 cut(s)	1065
BclI	TGATCA	1 cut(s)	118
BcnI	CCSGG	1 cut(s)	164
BcoDI	GTCTC	3 cut(s)	1025, 1084, 1106
BfaI	CTAG	3 cut(s)	209, 476, 1446
BfmI	CTRYAG	3 cut(s)	591, 648, 705
BglII	AGATCT	1 cut(s)	38
BisI	GCNGC	2 cut(s)	453, 1469
BlsI	GCNGC	2 cut(s)	454, 1470
Bme1390I	CCNGG	2 cut(s)	164, 1065
Bme18I	GGWCC	1 cut(s)	318
BmeT110I	CYCGRG	1 cut(s)	179
BmgBI	CACGTC	1 cut(s)	73
BmgT120I	GGNCC	2 cut(s)	133, 318
BmiI	GGNNCC	1 cut(s)	11
BmrFI	CCNGG	2 cut(s)	164, 1065
BmsI	GCATC	4 cut(s)	366, 409, 997, 1455
BpiI	GAAGAC	2 cut(s)	102, 1386
BpmI	CTGGAG	1 cut(s)	305
Bpu10I	CCTNAGC	1 cut(s)	80
Bpu14I	TTCGAA	1 cut(s)	154
BpuMI	CCSGG	1 cut(s)	164
BsaBI	GATNNNNATC	1 cut(s)	1161
BsaJI	CCNNGG	6 cut(s)	5, 13, 275, 1064, 1288, 1469
BsaWI	WCCGGW	2 cut(s)	340, 1341
BsaXI	ACNNNNNCTCC	4 cut(s)	11, 34, 41, 64
Bsc4I	CCNNNNNNNGG	3 cut(s)	130, 831, 1327
Bse118I	RCCGGY	1 cut(s)	340
Bse21I	CCTNAGG	2 cut(s)	861, 915
Bse3DI	GCAATG	1 cut(s)	948
Bse8I	GATNNNNATC	1 cut(s)	1161
BseBI	CCWGG	1 cut(s)	1065
BseDI	CCNNGG	6 cut(s)	5, 13, 275, 1064, 1288, 1469
BseGI	GGATG	6 cut(s)	172, 381, 400, 449, 525, 691
BseJI	GATNNNNATC	1 cut(s)	1161
BseLI	CCNNNNNNNGG	3 cut(s)	130, 831, 1327
BseMI	GCAATG	1 cut(s)	948
BseMII	CTCAG	3 cut(s)	94, 362, 929
BseRI	GAGGAG	5 cut(s)	302, 709, 903, 1098, 1325
BseSI	GKGCMC	1 cut(s)	513
BseXI	GCAGC	1 cut(s)	464
BseYI	CCCAGC	1 cut(s)	1321
BsgI	GTGCAG	1 cut(s)	840
Bsh1236I	CGCG	4 cut(s)	232, 1461, 1463, 1471
BshFI	GGCC	3 cut(s)	26, 134, 853
BshTI	ACCGGT	1 cut(s)	340
BsiHKCI	CYCGRG	1 cut(s)	179
BsiSI	CCGG	3 cut(s)	163, 341, 1342
BslFI	GGGAC	2 cut(s)	1228, 1343
BslI	CCNNNNNNNGG	3 cut(s)	130, 831, 1327
BsmAI	GTCTC	3 cut(s)	1025, 1084, 1106
BsmFI	GGGAC	2 cut(s)	1228, 1343
BsnI	GGCC	3 cut(s)	26, 134, 853
BsoBI	CYCGRG	1 cut(s)	179
Bsp119I	TTCGAA	1 cut(s)	154
Bsp1286I	GDGCHC	1 cut(s)	513
Bsp143I	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
Bsp19I	CCATGG	1 cut(s)	275
Bsp68I	TCGCGA	1 cut(s)	232
BspACI	CCGC	5 cut(s)	448, 1010, 1459, 1469, 1471
BspANI	GGCC	3 cut(s)	26, 134, 853
BspCNI	CTCAG	3 cut(s)	93, 363, 928
BspFNI	CGCG	4 cut(s)	232, 1461, 1463, 1471
BspHI	TCATGA	1 cut(s)	297
BspLI	GGNNCC	1 cut(s)	11
BspMAI	CTGCAG	3 cut(s)	595, 652, 709
BspPI	GGATC	2 cut(s)	295, 874
BspT104I	TTCGAA	1 cut(s)	154
BsrDI	GCAATG	1 cut(s)	948
BsrFI	RCCGGY	1 cut(s)	340
BssAI	RCCGGY	1 cut(s)	340
BssECI	CCNNGG	6 cut(s)	5, 13, 275, 1064, 1288, 1469
BssMI	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
BssSI	CACGAG	1 cut(s)	512
BssT1I	CCWWGG	1 cut(s)	275
Bst2BI	CACGAG	1 cut(s)	512
Bst2UI	CCWGG	1 cut(s)	1065
Bst4CI	ACNGT	5 cut(s)	544, 776, 1219, 1289, 1408
Bst6I	CTCTTC	1 cut(s)	274
BstBI	TTCGAA	1 cut(s)	154
BstC8I	GCNNGC	4 cut(s)	381, 450, 481, 855
BstDEI	CTNAG	4 cut(s)	80, 371, 861, 915
BstDSI	CCRYGG	3 cut(s)	275, 1288, 1469
BstF5I	GGATG	6 cut(s)	172, 381, 400, 449, 525, 691
BstFNI	CGCG	4 cut(s)	232, 1461, 1463, 1471
BstHHI	GCGC	1 cut(s)	1463
BstKTI	GATC	7 cut(s)	41, 121, 303, 328, 712, 869, 943
BstMAI	GTCTC	3 cut(s)	1025, 1084, 1106
BstMBI	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
BstMWI	GCNNNNNNNGC	1 cut(s)	971
BstNI	CCWGG	1 cut(s)	1065
BstSCI	CCNGG	2 cut(s)	162, 1063
BstSFI	CTRYAG	3 cut(s)	591, 648, 705
BstSLI	GKGCMC	1 cut(s)	513
BstUI	CGCG	4 cut(s)	232, 1461, 1463, 1471
BstV1I	GCAGC	1 cut(s)	464
BstV2I	GAAGAC	2 cut(s)	102, 1386
BstX2I	RGATCY	1 cut(s)	38
BstYI	RGATCY	1 cut(s)	38
Bsu36I	CCTNAGG	2 cut(s)	861, 915
BsuRI	GGCC	3 cut(s)	26, 134, 853
BtgI	CCRYGG	3 cut(s)	275, 1288, 1469
BtgZI	GCGATG	1 cut(s)	1478
BtrI	CACGTC	1 cut(s)	73
BtsCI	GGATG	6 cut(s)	172, 381, 400, 449, 525, 691
BtsI	GCAGTG	1 cut(s)	898
BtsIMutI	CAGTG	5 cut(s)	114, 549, 781, 898, 1404
BtuMI	TCGCGA	1 cut(s)	232
Cac8I	GCNNGC	4 cut(s)	381, 450, 481, 855
CciI	TCATGA	1 cut(s)	297
CfoI	GCGC	1 cut(s)	1463
Cfr10I	RCCGGY	1 cut(s)	340
Cfr13I	GGNCC	2 cut(s)	133, 318
Cfr42I	CCGCGG	1 cut(s)	1472
CseI	GACGC	1 cut(s)	1140
Csp6I	GTAC	2 cut(s)	835, 1316
CspAI	ACCGGT	1 cut(s)	340
CviAII	CATG	6 cut(s)	276, 298, 329, 484, 723, 1057
CviQI	GTAC	2 cut(s)	835, 1316
DdeI	CTNAG	4 cut(s)	80, 371, 861, 915
DpnI	GATC	7 cut(s)	40, 120, 302, 327, 711, 868, 942
DpnII	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
Eam1104I	CTCTTC	1 cut(s)	274
EarI	CTCTTC	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	275
Eco147I	AGGCCT	2 cut(s)	26, 853
Eco47I	GGWCC	1 cut(s)	318
Eco57I	CTGAAG	1 cut(s)	70
Eco81I	CCTNAGG	2 cut(s)	861, 915
Eco88I	CYCGRG	1 cut(s)	179
EcoO109I	RGGNCCY	1 cut(s)	318
EcoRII	CCWGG	1 cut(s)	1063
EcoT14I	CCWWGG	1 cut(s)	275
ErhI	CCWWGG	1 cut(s)	275
FaeI	CATG	6 cut(s)	279, 301, 332, 487, 726, 1060
FaqI	GGGAC	2 cut(s)	1228, 1343
FatI	CATG	6 cut(s)	275, 297, 328, 483, 722, 1056
FauI	CCCGC	3 cut(s)	441, 1464, 1466
FbaI	TGATCA	1 cut(s)	118
Fnu4HI	GCNGC	2 cut(s)	453, 1469
FokI	GGATG	6 cut(s)	179, 387, 388, 456, 512, 698
Fsp4HI	GCNGC	2 cut(s)	453, 1469
FspBI	CTAG	3 cut(s)	209, 476, 1446
GlaI	GCGC	1 cut(s)	1462
GluI	GCNGC	2 cut(s)	453, 1469
GsaI	CCCAGC	1 cut(s)	1325
GsuI	CTGGAG	1 cut(s)	305
HaeIII	GGCC	3 cut(s)	26, 134, 853
HapII	CCGG	3 cut(s)	163, 341, 1342
HgaI	GACGC	1 cut(s)	1140
HhaI	GCGC	1 cut(s)	1463
Hin1II	CATG	6 cut(s)	279, 301, 332, 487, 726, 1060
Hin6I	GCGC	1 cut(s)	1461
HinP1I	GCGC	1 cut(s)	1461
HincII	GTYRAC	3 cut(s)	142, 1347, 1402
HindII	GTYRAC	3 cut(s)	142, 1347, 1402
HpaII	CCGG	3 cut(s)	163, 341, 1342
HphI	GGTGA	4 cut(s)	104, 113, 752, 932
Hpy166II	GTNNAC	5 cut(s)	142, 923, 1285, 1347, 1402
Hpy188I	TCNGA	8 cut(s)	14, 89, 325, 397, 430, 940, 1111, 1432
Hpy8I	GTNNAC	5 cut(s)	142, 923, 1285, 1347, 1402
Hpy99I	CGWCG	2 cut(s)	152, 356
HpyAV	CCTTC	4 cut(s)	63, 744, 980, 1226
HpyCH4III	ACNGT	5 cut(s)	544, 776, 1219, 1289, 1408
HpyCH4IV	ACGT	3 cut(s)	72, 150, 354
HpyF10VI	GCNNNNNNNGC	1 cut(s)	971
HpyF3I	CTNAG	4 cut(s)	80, 371, 861, 915
HpySE526I	ACGT	3 cut(s)	72, 150, 354
Hsp92II	CATG	6 cut(s)	279, 301, 332, 487, 726, 1060
HspAI	GCGC	1 cut(s)	1461
Ksp22I	TGATCA	1 cut(s)	118
KspI	CCGCGG	1 cut(s)	1472
Kzo9I	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
LmnI	GCTCC	1 cut(s)	289
Lsp1109I	GCAGC	1 cut(s)	464
LweI	GCATC	4 cut(s)	366, 409, 997, 1455
MaeI	CTAG	3 cut(s)	209, 476, 1446
MaeII	ACGT	3 cut(s)	72, 150, 354
MaeIII	GTNAC	4 cut(s)	17, 336, 538, 989
MalI	GATC	7 cut(s)	40, 120, 302, 327, 711, 868, 942
MboI	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
MboII	GAAGA	9 cut(s)	39, 107, 215, 261, 1016, 1089, 1166, 1305, 1386
MfeI	CAATTG	1 cut(s)	870
MflI	RGATCY	1 cut(s)	38
MhlI	GDGCHC	1 cut(s)	513
MluCI	AATT	3 cut(s)	870, 878, 1301
MlyI	GAGTC	5 cut(s)	236, 524, 1022, 1250, 1366
MmeI	TCCRAC	1 cut(s)	408
MseI	TTAA	4 cut(s)	357, 468, 1221, 1492
MspA1I	CMGCKG	1 cut(s)	1471
MspI	CCGG	3 cut(s)	163, 341, 1342
MspR9I	CCNGG	2 cut(s)	164, 1065
MunI	CAATTG	1 cut(s)	870
MvaI	CCWGG	1 cut(s)	1065
MvnI	CGCG	4 cut(s)	232, 1461, 1463, 1471
MwoI	GCNNNNNNNGC	1 cut(s)	971
NciI	CCSGG	1 cut(s)	164
NcoI	CCATGG	1 cut(s)	275
NdeII	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
NlaIII	CATG	6 cut(s)	279, 301, 332, 487, 726, 1060
NlaIV	GGNNCC	1 cut(s)	11
NmuCI	GTSAC	1 cut(s)	17
NruI	TCGCGA	1 cut(s)	232
NspV	TTCGAA	1 cut(s)	154
PaeR7I	CTCGAG	1 cut(s)	179
PagI	TCATGA	1 cut(s)	297
PceI	AGGCCT	2 cut(s)	26, 853
PcsI	WCGNNNNNNNCGW	1 cut(s)	229
PfeI	GAWTC	9 cut(s)	547, 575, 604, 632, 661, 689, 1042, 1162, 1296
PflMI	CCANNNNNTGG	1 cut(s)	831
PfoI	TCCNGGA	1 cut(s)	162
PinAI	ACCGGT	1 cut(s)	340
PkrI	GCNGC	2 cut(s)	454, 1470
PleI	GAGTC	5 cut(s)	235, 523, 1021, 1250, 1366
PpsI	GAGTC	5 cut(s)	235, 523, 1021, 1250, 1366
PpuMI	RGGWCCY	1 cut(s)	318
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	1 cut(s)	1063
PspFI	CCCAGC	1 cut(s)	1321
PspGI	CCWGG	1 cut(s)	1063
PspN4I	GGNNCC	1 cut(s)	11
PspPI	GGNCC	2 cut(s)	133, 318
PspPPI	RGGWCCY	1 cut(s)	318
PstI	CTGCAG	3 cut(s)	595, 652, 709
PsuI	RGATCY	1 cut(s)	38
RruI	TCGCGA	1 cut(s)	232
RsaI	GTAC	2 cut(s)	836, 1317
RsaNI	GTAC	2 cut(s)	835, 1316
SacII	CCGCGG	1 cut(s)	1472
SaqAI	TTAA	4 cut(s)	357, 468, 1221, 1492
SatI	GCNGC	2 cut(s)	453, 1469
Sau3AI	GATC	7 cut(s)	38, 118, 300, 325, 709, 866, 940
Sau96I	GGNCC	2 cut(s)	133, 318
SchI	GAGTC	5 cut(s)	236, 524, 1022, 1250, 1366
ScrFI	CCNGG	2 cut(s)	164, 1065
SduI	GDGCHC	1 cut(s)	513
SfaNI	GCATC	4 cut(s)	366, 409, 997, 1455
SfcI	CTRYAG	3 cut(s)	591, 648, 705
Sfr274I	CTCGAG	1 cut(s)	179
Sfr303I	CCGCGG	1 cut(s)	1472
SfuI	TTCGAA	1 cut(s)	154
SgrBI	CCGCGG	1 cut(s)	1472
SinI	GGWCC	1 cut(s)	318
SlaI	CTCGAG	1 cut(s)	179
SmlI	CTYRAG	1 cut(s)	179
SmoI	CTYRAG	1 cut(s)	179
Sse9I	AATT	3 cut(s)	870, 878, 1301
SseBI	AGGCCT	2 cut(s)	26, 853
SsiI	CCGC	5 cut(s)	448, 1010, 1459, 1469, 1471
SspI	AATATT	1 cut(s)	1379
SspMI	CTAG	3 cut(s)	209, 476, 1446
StuI	AGGCCT	2 cut(s)	26, 853
StyD4I	CCNGG	2 cut(s)	162, 1063
StyI	CCWWGG	1 cut(s)	275
TaaI	ACNGT	5 cut(s)	544, 776, 1219, 1289, 1408
TaiI	ACGT	3 cut(s)	75, 153, 357
TaqI	TCGA	8 cut(s)	154, 180, 223, 254, 460, 565, 1102, 1251
TasI	AATT	3 cut(s)	870, 878, 1301
TauI	GCSGC	1 cut(s)	1471
TfiI	GAWTC	9 cut(s)	547, 575, 604, 632, 661, 689, 1042, 1162, 1296
Tru1I	TTAA	4 cut(s)	357, 468, 1221, 1492
Tru9I	TTAA	4 cut(s)	357, 468, 1221, 1492
TscAI	CASTG	5 cut(s)	121, 549, 781, 898, 1411
TseFI	GTSAC	1 cut(s)	17
TseI	GCWGC	1 cut(s)	452
Tsp45I	GTSAC	1 cut(s)	17
TspDTI	ATGAA	4 cut(s)	513, 514, 992, 999
TspGWI	ACGGA	1 cut(s)	188
TspRI	CASTG	5 cut(s)	121, 549, 781, 898, 1411
Van91I	CCANNNNNTGG	1 cut(s)	831
VpaK11BI	GGWCC	1 cut(s)	318
XapI	RAATTY	1 cut(s)	1301
XhoI	CTCGAG	1 cut(s)	179
XspI	CTAG	3 cut(s)	209, 476, 1446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.