Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0026590.1

Orthogroup ID

OG0002822

Physical Location & Seq

Genomic Coordinates Forward (+)

4902 .. 9374

Gene Structure 4473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0026590.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

atgcttgggattttggcgaagagaggagctttaggctcatggaggtcagtgagcgcagtacagataacgagggattacagcctcggagtgctgcccgatggagttgatcggaattccgaggccttttctcggaattctaaggacatgggtctcttaatctccgacctccaatcccacatccaaaaggttctcgctggaggaggacctggagctgtgaagagaaacaagagcaggaacaagctccttcctcgagaacgcattgatcgcttgcttgatcctggtgcttctttccttgagctttctcagcttgcagggcatgaactgtatgaagacacattaccatctggtgggataattactggaattggtcctgtccatgggaggctctgtatgtttgtggctaatgatcctactgttaagggtgggacttattatcccatcactgttaagaaacacctcagggcgcaagaaattgctgctcgatgcaagttaccatgtgtgtatcttgttgatagcggaggggcttttcttcccaaacaggcggaggtgtttcctgacaaggagaatttcggtagaattttctacaatcaagctttaatgtcagctgaaggcattcctcagattgcgctggtattgggctcttgcactgctggcggtgcgtatattcctgcaatggctgatgaaagtgtgatggttaagggaaatggtactatatttctggcaggacccccgcttgtgaaggctgccaccggagaagttgtatcggcagaggatttggggggtgctagtgtgcattgcaagacttcgggagtgtcagattattttgctcaagatgaactccatggacttactcttgggaggaatattattaagaacttgcacatggctgggaaacagggtttgaaaagcgaattgcggagcataagttccgaatataaggaaccattatttgatgtaaaggaactccgttccattgcaccaacagaccataagcaacagtttgatattcgttcagttattgctcgcattgttgatggaagcgaatttgatgaattcaagaaattgtatggcactactcttgtgacaggttttgctagaatcttcggacagcctgttggaattattggaaacaatgggatattatttaatgaatctgctctaaaaggtgcccacttcattgaattatgtactcaacgaaatattactttgatcttccttcagaacatcaccggatttatggttggctcgagatctgaagcaaatggaatagcaaaatctggagcaaaaatggtgatggcagtttcttgtgccaaggtccccaaagttactattataattggtggaagctttggcgctggcaattatgcaatgtgcggtcgtgcttatagtcccgatttcatgttcctttggccgaatgccaaaatatctgtgatgggtggtgctcaggccgctggtgtccttgctcagatagaaagaagcaacaagaaaaaacaaggaattgagtgggacaaggaggaagaggaaaagttcaaggcaaaggtagttgaggcatatgagaaagaaggaaactcttattactctacagcaaggctctgggatgatgggattattgatccagctgacaccagaaaagtcataggtctctccatcgctgcctctatgaaccgtgacccagaagaaaccaagttcgtgctcgtccctgtgcaacaattcaaaatcctcgcctggaactgcaaaggacttaacaatatagaaacgcaggatgctcttgttgatattgttcgatgtcaaaaccctagtttggtgtttctctctgaaaccctagcaacgtcggatttgctgacgacagtgcgtcggctgatgggcttcgatggagtcgtctgtgctcctaaagatgatgattgccgtggactggcattattttggcggagtgatatcccagttagactcaggaactactctgcgaatcacatcgacgtagaggttggggctgtagggtctgaaggtgttttcaggtttacaggaatctatggagtagctactacagagaaccgtaccatcacttgggatcttctccgactattagcctctcaacttcatattccatggttggtagctggagatttcaatgaagttctctgccatcaatggcggacgcacgtagggacgagtgggggcagctgcccctactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006520 GO:0006551 GO:0006552 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009987 GO:0016054 GO:0019752 GO:0031974 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046872 GO:0046914 GO:0050897 GO:0070013 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00280 ko01100 map00280 map01100

Pfam Domains

Protein Families

Carboxyl_trans

Protein Analysis

730

Amino Acids

79.33

Weight (kDa)

8.07

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34030
fragaria_vesca	FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870 FvH4_2g05870
malus_domestica	MD05G1082300.v1.1
prunus_persica	Prupe.8G126800_v2.0.a1
pyrus_communis	pycom05g07710 pycom05g07720
rosa_chinensis	RchiOBHm_Chr6g0257681 RchiOBHm_Chr6g0257701
rosa_laevigata	RLG00000014716 RLG00000014717
rosa_multiflora	Rmu_sc0000916.1_g000002 Rmu_sc0006683.1_g000009 Rmu_sc0006683.1_g000013 Rmu_sc0006683.1_g000018 Rmu_sc0011315.1_g000001 Rmu_sc0011315.1_g000004 Rmu_sc0026590.1_g000002
rosa_roxburghii	Rroxscaffold_7G00208880 Rroxscaffold_7G00208890
rosa_rugosa	Rorug05G0568900 Rorug05G0569000 Rorug05G0569100 Rorug05G0569200 Rorug05G0569300
rosa_samantha	Rh6AG085700 Rh6AG086000 Rh6BG080000 Rh6BG080100 Rh6CG075000 Rh6CG075100 Rh6DG071900 Rh6DG072000
rosa_wichuraiana	Rw6G007690 Rw6G007700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1334
AccB1I	GGYRCC	1 cut(s)	1166
AccB7I	CCANNNNNTGG	2 cut(s)	347, 2064
AciI	CCGC	9 cut(s)	516, 542, 654, 731, 916, 1374, 1449, 1927, 2152
AclWI	GGATC	4 cut(s)	269, 401, 1607, 2076
AcoI	YGGCCR	1 cut(s)	1409
AcsI	RAATTY	6 cut(s)	112, 133, 565, 576, 1043, 1052
AcuI	CTGAAG	4 cut(s)	627, 1202, 1275, 2022
AfaI	GTAC	4 cut(s)	60, 709, 1189, 2056
AfiI	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1801, 1912, 2064
AgsI	TTSAA	6 cut(s)	904, 1057, 1181, 1531, 1714, 2128
AhdI	GACNNNNNGTC	1 cut(s)	1851
AjnI	CCWGG	3 cut(s)	205, 277, 1724
AloI	GAACNNNNNNTCC	2 cut(s)	910, 942
Alw21I	GWGCWC	3 cut(s)	1444, 1695, 1888
Alw26I	GTCTC	2 cut(s)	155, 1646
AlwI	GGATC	4 cut(s)	269, 401, 1607, 2076
Ama87I	CYCGRG	2 cut(s)	249, 1246
AoxI	GGCC	3 cut(s)	120, 1409, 1446
ApeKI	GCWGC	6 cut(s)	91, 476, 743, 1652, 2178, 2181
ApoI	RAATTY	6 cut(s)	112, 133, 565, 576, 1043, 1052
Asp700I	GAANNNNTTC	1 cut(s)	612
AspLEI	GCGC	4 cut(s)	56, 466, 628, 1355
AspS9I	GGNCC	4 cut(s)	203, 368, 725, 1315
AsuHPI	GGTGA	2 cut(s)	1219, 1303
AvaI	CYCGRG	2 cut(s)	249, 1246
AvaII	GGWCC	4 cut(s)	203, 368, 725, 1315
AxyI	CCTNAGG	1 cut(s)	458
BaeGI	GKGCMC	1 cut(s)	1171
BanI	GGYRCC	1 cut(s)	1166
BanII	GRGCYC	1 cut(s)	641
BarI	GAAGNNNNNNTAC	2 cut(s)	321, 353
BbsI	GAAGAC	1 cut(s)	336
Bbv12I	GWGCWC	3 cut(s)	1444, 1695, 1888
BbvI	GCAGC	5 cut(s)	78, 463, 730, 1639, 2168
BceAI	ACGGC	1 cut(s)	1890
BciT130I	CCWGG	3 cut(s)	207, 279, 1726
BcoDI	GTCTC	2 cut(s)	155, 1646
BfaI	CTAG	4 cut(s)	786, 1095, 1797, 1823
BfmI	CTRYAG	3 cut(s)	1581, 1992, 2043
BfoI	RGCGCY	1 cut(s)	1356
BglII	AGATCT	1 cut(s)	1250
BisI	GCNGC	7 cut(s)	92, 477, 744, 1449, 1653, 2179, 2182
BlsI	GCNGC	7 cut(s)	93, 478, 745, 1450, 1654, 2180, 2183
Bme1390I	CCNGG	3 cut(s)	207, 279, 1726
Bme18I	GGWCC	4 cut(s)	203, 368, 725, 1315
BmeRI	GACNNNNNGTC	1 cut(s)	1851
BmeT110I	CYCGRG	2 cut(s)	249, 1246
BmgT120I	GGNCC	4 cut(s)	203, 368, 725, 1315
BmiI	GGNNCC	4 cut(s)	727, 942, 1168, 1317
BmrFI	CCNGG	3 cut(s)	207, 279, 1726
BmrI	ACTGGG	1 cut(s)	1934
BmsI	GCATC	2 cut(s)	473, 1753
BmuI	ACTGGG	1 cut(s)	1934
BoxI	GACNNNNGTC	1 cut(s)	147
BpiI	GAAGAC	1 cut(s)	336
BpmI	CTGGAG	4 cut(s)	216, 228, 1299, 2139
Bpu10I	CCTNAGC	1 cut(s)	1443
BpuEI	CTTGAG	2 cut(s)	314, 813
BsaAI	YACGTR	1 cut(s)	2161
BsaI	GGTCTC	2 cut(s)	155, 1646
BsaJI	CCNNGG	7 cut(s)	82, 117, 376, 841, 1311, 1906, 2105
BsaWI	WCCGGW	2 cut(s)	749, 1229
BsaXI	ACNNNNNCTCC	6 cut(s)	373, 403, 744, 774, 910, 940
Bsc4I	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1801, 1912, 2064
Bse1I	ACTGG	3 cut(s)	364, 1917, 1940
Bse21I	CCTNAGG	1 cut(s)	458
Bse3DI	GCAATG	4 cut(s)	678, 793, 972, 1374
BseBI	CCWGG	3 cut(s)	207, 279, 1726
BseDI	CCNNGG	7 cut(s)	82, 117, 376, 841, 1311, 1906, 2105
BseGI	GGATG	3 cut(s)	177, 1603, 1768
BseLI	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1801, 1912, 2064
BseMI	GCAATG	4 cut(s)	678, 793, 972, 1374
BseMII	CTCAG	6 cut(s)	317, 472, 632, 1457, 1478, 1963
BseNI	ACTGG	3 cut(s)	364, 1917, 1940
BseRI	GAGGAG	2 cut(s)	39, 213
BseSI	GKGCMC	1 cut(s)	1171
BseXI	GCAGC	5 cut(s)	78, 463, 730, 1639, 2168
BseYI	CCCAGC	1 cut(s)	887
Bsh1285I	CGRYCG	1 cut(s)	1378
BshFI	GGCC	3 cut(s)	122, 1411, 1448
BshNI	GGYRCC	1 cut(s)	1166
BsiEI	CGRYCG	1 cut(s)	1378
BsiHKAI	GWGCWC	3 cut(s)	1444, 1695, 1888
BsiHKCI	CYCGRG	2 cut(s)	249, 1246
BsiSI	CCGG	2 cut(s)	750, 1230
BslFI	GGGAC	6 cut(s)	439, 1301, 1374, 1520, 1682, 2179
BslI	CCNNNNNNNGG	6 cut(s)	129, 347, 377, 1801, 1912, 2064
BsmAI	GTCTC	2 cut(s)	155, 1646
BsmFI	GGGAC	6 cut(s)	439, 1301, 1374, 1520, 1682, 2179
BsmI	GAATGC	2 cut(s)	612, 1420
BsnI	GGCC	3 cut(s)	122, 1411, 1448
Bso31I	GGTCTC	2 cut(s)	155, 1646
BsoBI	CYCGRG	2 cut(s)	249, 1246
Bsp1286I	GDGCHC	5 cut(s)	641, 1171, 1444, 1695, 1888
Bsp143I	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
Bsp19I	CCATGG	3 cut(s)	376, 841, 2105
BspACI	CCGC	9 cut(s)	516, 542, 654, 731, 916, 1374, 1449, 1927, 2152
BspANI	GGCC	3 cut(s)	122, 1411, 1448
BspCNI	CTCAG	6 cut(s)	316, 471, 631, 1456, 1477, 1962
BspLI	GGNNCC	4 cut(s)	727, 942, 1168, 1317
BspPI	GGATC	4 cut(s)	269, 401, 1607, 2076
BspT107I	GGYRCC	1 cut(s)	1166
BspTNI	GGTCTC	2 cut(s)	155, 1646
BsrDI	GCAATG	4 cut(s)	678, 793, 972, 1374
BsrI	ACTGG	3 cut(s)	364, 1917, 1940
BssECI	CCNNGG	7 cut(s)	82, 117, 376, 841, 1311, 1906, 2105
BssMI	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
BssT1I	CCWWGG	4 cut(s)	376, 841, 1311, 2105
Bst2UI	CCWGG	3 cut(s)	207, 279, 1726
Bst4CI	ACNGT	7 cut(s)	324, 415, 445, 999, 1667, 1849, 2054
Bst6I	CTCTTC	3 cut(s)	14, 212, 1512
BstBAI	YACGTR	1 cut(s)	2161
BstC8I	GCNNGC	5 cut(s)	269, 309, 652, 1024, 1357
BstDEI	CTNAG	7 cut(s)	138, 303, 458, 618, 1443, 1464, 1949
BstDSI	CCRYGG	4 cut(s)	376, 841, 1906, 2105
BstF5I	GGATG	3 cut(s)	177, 1603, 1768
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	4 cut(s)	56, 466, 628, 1355
BstKTI	GATC	8 cut(s)	109, 265, 277, 409, 1212, 1253, 1615, 2071
BstMAI	GTCTC	2 cut(s)	155, 1646
BstMBI	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
BstMCI	CGRYCG	1 cut(s)	1378
BstMWI	GCNNNNNNNGC	6 cut(s)	264, 304, 313, 651, 656, 1448
BstNI	CCWGG	3 cut(s)	207, 279, 1726
BstPAI	GACNNNNGTC	1 cut(s)	147
BstSCI	CCNGG	3 cut(s)	205, 277, 1724
BstSFI	CTRYAG	3 cut(s)	1581, 1992, 2043
BstSLI	GKGCMC	1 cut(s)	1171
BstV1I	GCAGC	5 cut(s)	78, 463, 730, 1639, 2168
BstV2I	GAAGAC	1 cut(s)	336
BstX2I	RGATCY	2 cut(s)	1250, 2068
BstYI	RGATCY	2 cut(s)	1250, 2068
Bsu36I	CCTNAGG	1 cut(s)	458
BsuRI	GGCC	3 cut(s)	122, 1411, 1448
BtgI	CCRYGG	4 cut(s)	376, 841, 1906, 2105
BtgZI	GCGATG	1 cut(s)	1633
BtsCI	GGATG	3 cut(s)	177, 1603, 1768
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	4 cut(s)	54, 441, 645, 1854
Cac8I	GCNNGC	5 cut(s)	269, 309, 652, 1024, 1357
CfoI	GCGC	4 cut(s)	56, 466, 628, 1355
Cfr13I	GGNCC	4 cut(s)	203, 368, 725, 1315
CseI	GACGC	2 cut(s)	1841, 2164
Csp6I	GTAC	4 cut(s)	59, 708, 1188, 2055
CviAII	CATG	9 cut(s)	39, 145, 317, 377, 495, 842, 883, 1399, 2106
CviQI	GTAC	4 cut(s)	59, 708, 1188, 2055
DdeI	CTNAG	7 cut(s)	138, 303, 458, 618, 1443, 1464, 1949
DpnI	GATC	8 cut(s)	108, 264, 276, 408, 1211, 1252, 1614, 2070
DpnII	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
DriI	GACNNNNNGTC	1 cut(s)	1851
EaeI	YGGCCR	1 cut(s)	1409
Eam1104I	CTCTTC	3 cut(s)	14, 212, 1512
Eam1105I	GACNNNNNGTC	1 cut(s)	1851
EarI	CTCTTC	3 cut(s)	14, 212, 1512
EciI	GGCGGA	3 cut(s)	557, 1942, 2167
Eco130I	CCWWGG	4 cut(s)	376, 841, 1311, 2105
Eco147I	AGGCCT	1 cut(s)	122
Eco24I	GRGCYC	1 cut(s)	641
Eco31I	GGTCTC	2 cut(s)	155, 1646
Eco32I	GATATC	1 cut(s)	1936
Eco47I	GGWCC	4 cut(s)	203, 368, 725, 1315
Eco57I	CTGAAG	4 cut(s)	627, 1202, 1275, 2022
Eco81I	CCTNAGG	1 cut(s)	458
Eco88I	CYCGRG	2 cut(s)	249, 1246
EcoO109I	RGGNCCY	3 cut(s)	203, 725, 1315
EcoRI	GAATTC	3 cut(s)	112, 133, 1052
EcoRII	CCWGG	3 cut(s)	205, 277, 1724
EcoRV	GATATC	1 cut(s)	1936
EcoT14I	CCWWGG	4 cut(s)	376, 841, 1311, 2105
EcoT38I	GRGCYC	1 cut(s)	641
ErhI	CCWWGG	4 cut(s)	376, 841, 1311, 2105
FaeI	CATG	9 cut(s)	42, 148, 320, 380, 498, 845, 886, 1402, 2109
FaqI	GGGAC	6 cut(s)	439, 1301, 1374, 1520, 1682, 2179
FatI	CATG	9 cut(s)	38, 144, 316, 376, 494, 841, 882, 1398, 2105
FauI	CCCGC	1 cut(s)	738
FauNDI	CATATG	1 cut(s)	1552
Fnu4HI	GCNGC	7 cut(s)	92, 477, 744, 1449, 1653, 2179, 2182
FokI	GGATG	3 cut(s)	164, 1610, 1775
FriOI	GRGCYC	1 cut(s)	641
Fsp4HI	GCNGC	7 cut(s)	92, 477, 744, 1449, 1653, 2179, 2182
FspBI	CTAG	4 cut(s)	786, 1095, 1797, 1823
GlaI	GCGC	4 cut(s)	55, 465, 627, 1354
GluI	GCNGC	7 cut(s)	92, 477, 744, 1449, 1653, 2179, 2182
GsaI	CCCAGC	1 cut(s)	891
GsuI	CTGGAG	4 cut(s)	216, 228, 1299, 2139
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	3 cut(s)	122, 1411, 1448
HapII	CCGG	2 cut(s)	750, 1230
HgaI	GACGC	2 cut(s)	1841, 2164
HhaI	GCGC	4 cut(s)	56, 466, 628, 1355
Hin1II	CATG	9 cut(s)	42, 148, 320, 380, 498, 845, 886, 1402, 2109
Hin6I	GCGC	4 cut(s)	54, 464, 626, 1353
HinP1I	GCGC	4 cut(s)	54, 464, 626, 1353
HindIII	AAGCTT	2 cut(s)	591, 1345
HinfI	GANTC	6 cut(s)	1098, 1151, 1875, 1947, 1966, 2025
HpaII	CCGG	2 cut(s)	750, 1230
HphI	GGTGA	2 cut(s)	1219, 1303
Hpy166II	GTNNAC	2 cut(s)	1910, 2019
Hpy188III	TCNNGA	9 cut(s)	251, 554, 807, 830, 1057, 1248, 1278, 1391, 1951
Hpy8I	GTNNAC	2 cut(s)	1910, 2019
Hpy99I	CGWCG	3 cut(s)	1834, 1857, 1979
HpyAV	CCTTC	6 cut(s)	254, 602, 733, 1226, 1556, 1997
HpyCH4III	ACNGT	7 cut(s)	324, 415, 445, 999, 1667, 1849, 2054
HpyCH4IV	ACGT	3 cut(s)	1829, 1977, 2160
HpyF10VI	GCNNNNNNNGC	6 cut(s)	264, 304, 313, 651, 656, 1448
HpyF3I	CTNAG	7 cut(s)	138, 303, 458, 618, 1443, 1464, 1949
HpySE526I	ACGT	3 cut(s)	1829, 1977, 2160
Hsp92II	CATG	9 cut(s)	42, 148, 320, 380, 498, 845, 886, 1402, 2109
HspAI	GCGC	4 cut(s)	54, 464, 626, 1353
Kzo9I	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
LmnI	GCTCC	6 cut(s)	26, 209, 246, 918, 1280, 1891
Lsp1109I	GCAGC	5 cut(s)	78, 463, 730, 1639, 2168
LweI	GCATC	2 cut(s)	473, 1753
MaeI	CTAG	4 cut(s)	786, 1095, 1797, 1823
MaeII	ACGT	3 cut(s)	1829, 1977, 2160
MaeIII	GTNAC	4 cut(s)	489, 1081, 1324, 1667
MalI	GATC	8 cut(s)	108, 264, 276, 408, 1211, 1252, 1614, 2070
MboI	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
MboII	GAAGA	9 cut(s)	31, 229, 341, 521, 1093, 1204, 1529, 1688, 2063
MflI	RGATCY	2 cut(s)	1250, 2068
MhlI	GDGCHC	5 cut(s)	641, 1171, 1444, 1695, 1888
MlyI	GAGTC	2 cut(s)	1884, 1941
MmeI	TCCRAC	4 cut(s)	186, 1096, 1812, 2101
MroXI	GAANNNNTTC	1 cut(s)	612
MseI	TTAA	8 cut(s)	155, 417, 447, 596, 696, 870, 1146, 1743
MspA1I	CMGCKG	4 cut(s)	605, 1451, 1619, 2181
MspI	CCGG	2 cut(s)	750, 1230
MspR9I	CCNGG	3 cut(s)	207, 279, 1726
Mva1269I	GAATGC	2 cut(s)	612, 1420
MvaI	CCWGG	3 cut(s)	207, 279, 1726
MwoI	GCNNNNNNNGC	6 cut(s)	264, 304, 313, 651, 656, 1448
NcoI	CCATGG	3 cut(s)	376, 841, 2105
NdeI	CATATG	1 cut(s)	1552
NdeII	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
NlaIII	CATG	9 cut(s)	42, 148, 320, 380, 498, 845, 886, 1402, 2109
NlaIV	GGNNCC	4 cut(s)	727, 942, 1168, 1317
NmuCI	GTSAC	2 cut(s)	1081, 1667
PaeR7I	CTCGAG	2 cut(s)	249, 1246
PceI	AGGCCT	1 cut(s)	122
PcsI	WCGNNNNNNNCGW	1 cut(s)	1875
PctI	GAATGC	2 cut(s)	612, 1420
PdmI	GAANNNNTTC	1 cut(s)	612
PfeI	GAWTC	4 cut(s)	1098, 1151, 1966, 2025
PflMI	CCANNNNNTGG	2 cut(s)	347, 2064
PkrI	GCNGC	7 cut(s)	93, 478, 745, 1450, 1654, 2180, 2183
PleI	GAGTC	2 cut(s)	1883, 1941
PpsI	GAGTC	2 cut(s)	1883, 1941
Ppu21I	YACGTR	1 cut(s)	2161
PpuMI	RGGWCCY	3 cut(s)	203, 725, 1315
PshAI	GACNNNNGTC	1 cut(s)	147
PsiI	TTATAA	1 cut(s)	1334
Psp5II	RGGWCCY	3 cut(s)	203, 725, 1315
Psp6I	CCWGG	3 cut(s)	205, 277, 1724
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	3 cut(s)	205, 277, 1724
PspN4I	GGNNCC	4 cut(s)	727, 942, 1168, 1317
PspPI	GGNCC	4 cut(s)	203, 368, 725, 1315
PspPPI	RGGWCCY	3 cut(s)	203, 725, 1315
PsuI	RGATCY	2 cut(s)	1250, 2068
PvuII	CAGCTG	3 cut(s)	605, 1619, 2181
RsaI	GTAC	4 cut(s)	60, 709, 1189, 2056
RsaNI	GTAC	4 cut(s)	59, 708, 1188, 2055
SaqAI	TTAA	8 cut(s)	155, 417, 447, 596, 696, 870, 1146, 1743
SatI	GCNGC	7 cut(s)	92, 477, 744, 1449, 1653, 2179, 2182
Sau3AI	GATC	8 cut(s)	106, 262, 274, 406, 1209, 1250, 1612, 2068
Sau96I	GGNCC	4 cut(s)	203, 368, 725, 1315
SchI	GAGTC	2 cut(s)	1884, 1941
ScrFI	CCNGG	3 cut(s)	207, 279, 1726
SduI	GDGCHC	5 cut(s)	641, 1171, 1444, 1695, 1888
SfaNI	GCATC	2 cut(s)	473, 1753
SfcI	CTRYAG	3 cut(s)	1581, 1992, 2043
Sfr274I	CTCGAG	2 cut(s)	249, 1246
SinI	GGWCC	4 cut(s)	203, 368, 725, 1315
SlaI	CTCGAG	2 cut(s)	249, 1246
SmlI	CTYRAG	4 cut(s)	249, 293, 828, 1246
SmoI	CTYRAG	4 cut(s)	249, 293, 828, 1246
SseBI	AGGCCT	1 cut(s)	122
SsiI	CCGC	9 cut(s)	516, 542, 654, 731, 916, 1374, 1449, 1927, 2152
SspI	AATATT	2 cut(s)	865, 1201
SspMI	CTAG	4 cut(s)	786, 1095, 1797, 1823
StuI	AGGCCT	1 cut(s)	122
StyD4I	CCNGG	3 cut(s)	205, 277, 1724
StyI	CCWWGG	4 cut(s)	376, 841, 1311, 2105
TaaI	ACNGT	7 cut(s)	324, 415, 445, 999, 1667, 1849, 2054
TaiI	ACGT	3 cut(s)	1832, 1980, 2163
TaqI	TCGA	6 cut(s)	250, 481, 1247, 1783, 1869, 1974
TatI	WGTACW	2 cut(s)	58, 1187
TauI	GCSGC	1 cut(s)	1451
TfiI	GAWTC	4 cut(s)	1098, 1151, 1966, 2025
Tru1I	TTAA	8 cut(s)	155, 417, 447, 596, 696, 870, 1146, 1743
Tru9I	TTAA	8 cut(s)	155, 417, 447, 596, 696, 870, 1146, 1743
TscAI	CASTG	4 cut(s)	54, 448, 652, 1854
TseFI	GTSAC	2 cut(s)	1081, 1667
TseI	GCWGC	6 cut(s)	91, 476, 743, 1652, 2178, 2181
Tsp45I	GTSAC	2 cut(s)	1081, 1667
TspGWI	ACGGA	1 cut(s)	956
TspRI	CASTG	4 cut(s)	54, 448, 652, 1854
Van91I	CCANNNNNTGG	2 cut(s)	347, 2064
VpaK11BI	GGWCC	4 cut(s)	203, 368, 725, 1315
XapI	RAATTY	6 cut(s)	112, 133, 565, 576, 1043, 1052
XhoI	CTCGAG	2 cut(s)	249, 1246
XmnI	GAANNNNTTC	1 cut(s)	612
XspI	CTAG	4 cut(s)	786, 1095, 1797, 1823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.