Rmu_sc0001228.1_g000009

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001228.1
OG0013810
Physical Location & Seq
Forward (+)
54568 .. 58799
4232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001228.1_g000009.1.cds

Sequence Viewer

Length: 1782 bp
atgaaggcagaggcatgtggctcggggttcaattctatggtggcggcgttaagagacttcgtgctccttgtagatcgtgtggtgaaggagcgtgtcatagtggtgaatgtcggtgatgcaagagggagggtgcacccgtttctggtagagtgcccaaatcactttgctggcccaaaacaatttggtgcggcggcaggttttgttttcaaggattccactagagaacctatcctagctacttccaattttgttgcagctcatgatgttcttctcatggaagccttggccttgcgtgcaagcctccatgcagagtggctacatggtttttctaacattgaagtgcgcaacatctcccgttcccaaagcgccacgtatgataaccttcaggagtcctgcaaaccaccgcgtgagcctcactctcccctccttaaatcgaagagccactgtactcccaaagcatatatatacgcccccaaaaccgctctgactcccaaacacacttccaattcaaagcttttcccaccacaacaacaacaaaccttcaacagcagagcttctccacagcatgcaaaactccttctctctgactcccaaagacttccaattcaaagcttttcccaccacaacaacaacaaaccttcaacagcagagcttctccacagcatgcaaaactccttcaatcgatccaaactcgacaccgccggagatccacaacagttgacccaaaacccacttcctcctccgcctcgccgcctcacccaagagcaagaactcgccgtaatcgtctccgctctacgaaacgtcgtcgccggcaccaccaccaccatggacttcaactctctcttcccttcctaccattacccggccgccgcttcctcctcctcctctcccgccctattcgaagcgcctcgccgcctcacccaagagcaagaactcgccgtaatcgtctccgctctacggaacgtcgtcgccggcaccaccaccgccatggacttcaactctctcttcccttcctaccattacccggccgccgcttcctcctcctcctctcccgccctattcgaagcgtctgatgccgagacgtgtccggtttgtaaaattcaaggctgccttggatgcaattttttcccgccagcacaggaggagaacagcaacaacaacaacaacaagaaggcacccaagaagaggctgaagaagaactacaggggagtgaggcagcggccttggggcaaatgggccgctgaaatccgagacccgaggagggccactcgggtctggctcggcacgttccacactgccgaggaggcggcccgtgcatatgacaaggctgccattgagtttcgcggtcccagagcgaaactcaatttcccgtttccggataactcattgtcgatgaaccaagaaacttcgacgccgcccacacagtccattcaagaaccccagaagcagcagatagttgttacagatactaagcaagagaacaagagcgaggattcaaatggaatggaatgcgagttctgggaaaggatcggggaagacgagctgtttcaacagtggatgatgacgatggactacgcacctgatcattcgtcggattctgggaatgggttgaaggtttcaatgcggattggtcgacctccagatattagattgaaggtggtgacaagcgcaggttgtctgctcccttatcatttggggggatcgattgccggaagaagtcatcctagcagtgttggcttggtcaatggcagtgttgactatgatggtggagacttgggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AP2

Protein Analysis

593

Amino Acids

65.34

Weight (kDa)

8.77

Isoelectric Point (pI)

56.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013810)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34410
fragaria_vesca FvH4_2g06050 FvH4_2g06060
malus_domestica MD05G1080900.v1.1 MD10G1094700.v1.1
prunus_persica Prupe.8G125100_v2.0.a1
pyrus_communis pycom05g07360 pycom10g07840
rosa_chinensis RchiOBHm_Chr6g0257181
rosa_laevigata RLG00000014680
rosa_multiflora Rmu_sc0001228.1_g000009
rosa_rugosa Rorug05G0574400
rosa_samantha Rh6AG092200 Rh6BG083100 Rh6CG079800 Rh6DG075400
rosa_wichuraiana Rw6G007980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 344
Acc36I ACCTGC 2 cut(s) 185, 1661
AccB1I GGYRCC 3 cut(s) 812, 974, 1174
AccBSI CCGCTC 3 cut(s) 482, 791, 953
AccI GTMKAC 1 cut(s) 1633
AccII CGCG 2 cut(s) 406, 1344
AccIII TCCGGA 1 cut(s) 1375
AclWI GGATC 4 cut(s) 678, 701, 1535, 1708
AcoI YGGCCR 2 cut(s) 864, 1026
AcsI RAATTY 1 cut(s) 1098
AcuI CTGAAG 2 cut(s) 368, 1211
AcyI GRCGYC 1 cut(s) 1412
AdeI CACNNNGTG 1 cut(s) 407
AfaI GTAC 1 cut(s) 448
AfiI CCNNNNNNNGG 7 cut(s) 142, 862, 957, 1024, 1185, 1261, 1375
AflIII ACRYGT 1 cut(s) 1082
AjiI CACGTC 1 cut(s) 1083
AjuI GAANNNNNNNTTGG 2 cut(s) 717, 749
AloI GAACNNNNNNTCC 2 cut(s) 1499, 1531
AluBI AGCT 7 cut(s) 236, 257, 514, 554, 612, 652, 1543
AluI AGCT 7 cut(s) 236, 257, 514, 554, 612, 652, 1543
Alw21I GWGCWC 2 cut(s) 66, 135
Alw26I GTCTC 6 cut(s) 48, 790, 952, 1073, 1245, 1764
Alw44I GTGCAC 1 cut(s) 131
AlwI GGATC 4 cut(s) 678, 701, 1535, 1708
Ama87I CYCGRG 3 cut(s) 22, 1255, 1269
Aor13HI TCCGGA 1 cut(s) 1375
AoxI GGCC 8 cut(s) 169, 285, 864, 1026, 1220, 1236, 1263, 1308
ApaLI GTGCAC 1 cut(s) 131
ApeKI GCWGC 5 cut(s) 254, 1107, 1216, 1328, 1447
ApoI RAATTY 1 cut(s) 1098
AspLEI GCGC 4 cut(s) 345, 368, 907, 1670
AspS9I GGNCC 5 cut(s) 170, 1236, 1263, 1309, 1346
AsuC2I CCSGG 2 cut(s) 863, 1025
AsuHPI GGTGA 6 cut(s) 94, 115, 125, 748, 910, 1672
AsuII TTCGAA 2 cut(s) 900, 1062
AvaI CYCGRG 3 cut(s) 22, 1255, 1269
AvaII GGWCC 1 cut(s) 1346
BaeGI GKGCMC 2 cut(s) 135, 155
BanI GGYRCC 3 cut(s) 812, 974, 1174
BarI GAAGNNNNNNTAC 2 cut(s) 1184, 1216
BbsI GAAGAC 1 cut(s) 1542
Bbv12I GWGCWC 2 cut(s) 66, 135
BbvI GCAGC 5 cut(s) 266, 1094, 1228, 1315, 1459
BccI CCATC 2 cut(s) 1561, 1757
BceAI ACGGC 2 cut(s) 761, 923
BcgI CGANNNNNNTGC 1 cut(s) 37
BclI TGATCA 1 cut(s) 1582
BcnI CCSGG 2 cut(s) 863, 1025
BcoDI GTCTC 6 cut(s) 48, 790, 952, 1073, 1245, 1764
BfaI CTAG 4 cut(s) 219, 233, 1725, 1780
BfmI CTRYAG 1 cut(s) 1201
BfoI RGCGCY 2 cut(s) 369, 908
BfuAI ACCTGC 2 cut(s) 185, 1661
BglI GCCNNNNNGGC 1 cut(s) 1304
Bme1390I CCNGG 2 cut(s) 863, 1025
Bme18I GGWCC 1 cut(s) 1346
BmeT110I CYCGRG 3 cut(s) 22, 1255, 1269
BmgBI CACGTC 1 cut(s) 1083
BmgT120I GGNCC 5 cut(s) 170, 1236, 1263, 1309, 1346
BmiI GGNNCC 4 cut(s) 814, 976, 1176, 1348
BmrFI CCNGG 2 cut(s) 863, 1025
BmsI GCATC 3 cut(s) 106, 1063, 1106
BpiI GAAGAC 1 cut(s) 1542
BplI GAGNNNNNCTC 6 cut(s) 401, 433, 1252, 1284, 1344, 1376
BpmI CTGGAG 1 cut(s) 1623
Bpu14I TTCGAA 2 cut(s) 900, 1062
BpuMI CCSGG 2 cut(s) 863, 1025
Bsa29I ATCGAT 2 cut(s) 682, 1703
BsaAI YACGTR 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 1412
BsaI GGTCTC 1 cut(s) 1245
BsaJI CCNNGG 7 cut(s) 282, 825, 987, 1111, 1223, 1256, 1299
BsaWI WCCGGW 2 cut(s) 1087, 1375
Bsc4I CCNNNNNNNGG 7 cut(s) 142, 862, 957, 1024, 1185, 1261, 1375
Bse118I RCCGGY 2 cut(s) 809, 971
BseAI TCCGGA 1 cut(s) 1375
BseCI ATCGAT 2 cut(s) 682, 1703
BseDI CCNNGG 7 cut(s) 282, 825, 987, 1111, 1223, 1256, 1299
BseGI GGATG 3 cut(s) 1121, 1563, 1720
BseLI CCNNNNNNNGG 7 cut(s) 142, 862, 957, 1024, 1185, 1261, 1375
BseSI GKGCMC 2 cut(s) 135, 155
BseX3I CGGCCG 2 cut(s) 864, 1026
BseXI GCAGC 5 cut(s) 266, 1094, 1228, 1315, 1459
Bsh1236I CGCG 2 cut(s) 406, 1344
Bsh1285I CGRYCG 2 cut(s) 867, 1029
BshFI GGCC 8 cut(s) 171, 287, 866, 1028, 1222, 1238, 1265, 1310
BshNI GGYRCC 3 cut(s) 812, 974, 1174
BshVI ATCGAT 2 cut(s) 682, 1703
BsiEI CGRYCG 2 cut(s) 867, 1029
BsiHKAI GWGCWC 2 cut(s) 66, 135
BsiHKCI CYCGRG 3 cut(s) 22, 1255, 1269
BsiSI CCGG 8 cut(s) 702, 810, 863, 972, 1025, 1088, 1376, 1710
BslFI GGGAC 1 cut(s) 1332
BslI CCNNNNNNNGG 7 cut(s) 142, 862, 957, 1024, 1185, 1261, 1375
BsmAI GTCTC 6 cut(s) 48, 790, 952, 1073, 1245, 1764
BsmBI CGTCTC 3 cut(s) 790, 952, 1073
BsmFI GGGAC 1 cut(s) 1332
BsmI GAATGC 1 cut(s) 1514
BsnI GGCC 8 cut(s) 171, 287, 866, 1028, 1222, 1238, 1265, 1310
Bso31I GGTCTC 1 cut(s) 1245
BsoBI CYCGRG 3 cut(s) 22, 1255, 1269
Bsp119I TTCGAA 2 cut(s) 900, 1062
Bsp1286I GDGCHC 3 cut(s) 66, 135, 155
Bsp13I TCCGGA 1 cut(s) 1375
Bsp143I GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
Bsp19I CCATGG 2 cut(s) 825, 987
BspANI GGCC 8 cut(s) 171, 287, 866, 1028, 1222, 1238, 1265, 1310
BspDI ATCGAT 2 cut(s) 682, 1703
BspEI TCCGGA 1 cut(s) 1375
BspFNI CGCG 2 cut(s) 406, 1344
BspHI TCATGA 1 cut(s) 259
BspLI GGNNCC 4 cut(s) 814, 976, 1176, 1348
BspMI ACCTGC 2 cut(s) 185, 1661
BspPI GGATC 4 cut(s) 678, 701, 1535, 1708
BspQI GCTCTTC 1 cut(s) 431
BspT104I TTCGAA 2 cut(s) 900, 1062
BspT107I GGYRCC 3 cut(s) 812, 974, 1174
BspTNI GGTCTC 1 cut(s) 1245
BsrBI CCGCTC 3 cut(s) 482, 791, 953
BsrFI RCCGGY 2 cut(s) 809, 971
BssAI RCCGGY 2 cut(s) 809, 971
BssECI CCNNGG 7 cut(s) 282, 825, 987, 1111, 1223, 1256, 1299
BssMI GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
BssNI GRCGYC 1 cut(s) 1412
BssT1I CCWWGG 5 cut(s) 282, 825, 987, 1111, 1223
Bst4CI ACNGT 4 cut(s) 446, 717, 1425, 1554
Bst6I CTCTTC 4 cut(s) 431, 848, 1010, 1178
BstACI GRCGYC 1 cut(s) 1412
BstBAI YACGTR 1 cut(s) 372
BstBI TTCGAA 2 cut(s) 900, 1062
BstC8I GCNNGC 8 cut(s) 169, 294, 298, 567, 665, 811, 973, 1134
BstDEI CTNAG 1 cut(s) 1470
BstDSI CCRYGG 2 cut(s) 825, 987
BstF5I GGATG 3 cut(s) 1121, 1563, 1720
BstFNI CGCG 2 cut(s) 406, 1344
BstH2I RGCGCY 2 cut(s) 369, 908
BstHHI GCGC 4 cut(s) 345, 368, 907, 1670
BstKTI GATC 6 cut(s) 76, 686, 709, 1530, 1585, 1703
BstMAI GTCTC 6 cut(s) 48, 790, 952, 1073, 1245, 1764
BstMBI GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
BstMCI CGRYCG 2 cut(s) 867, 1029
BstMWI GCNNNNNNNGC 6 cut(s) 293, 1073, 1116, 1304, 1313, 1734
BstNSI RCATGY 3 cut(s) 18, 569, 667
BstSCI CCNGG 2 cut(s) 861, 1023
BstSFI CTRYAG 1 cut(s) 1201
BstSLI GKGCMC 2 cut(s) 135, 155
BstUI CGCG 2 cut(s) 406, 1344
BstV1I GCAGC 5 cut(s) 266, 1094, 1228, 1315, 1459
BstV2I GAAGAC 1 cut(s) 1542
BstX2I RGATCY 1 cut(s) 706
BstXI CCANNNNNNTGG 2 cut(s) 826, 988
BstYI RGATCY 1 cut(s) 706
BstZI CGGCCG 2 cut(s) 864, 1026
Bsu15I ATCGAT 2 cut(s) 682, 1703
BsuRI GGCC 8 cut(s) 171, 287, 866, 1028, 1222, 1238, 1265, 1310
BsuTUI ATCGAT 2 cut(s) 682, 1703
BtgI CCRYGG 2 cut(s) 825, 987
BtrI CACGTC 1 cut(s) 1083
BtsCI GGATG 3 cut(s) 1121, 1563, 1720
BtsI GCAGTG 3 cut(s) 1293, 1735, 1756
BtsIMutI CAGTG 5 cut(s) 442, 1293, 1559, 1735, 1756
BveI ACCTGC 2 cut(s) 185, 1661
Cac8I GCNNGC 8 cut(s) 169, 294, 298, 567, 665, 811, 973, 1134
CciI TCATGA 1 cut(s) 259
CfoI GCGC 4 cut(s) 345, 368, 907, 1670
Cfr10I RCCGGY 2 cut(s) 809, 971
Cfr13I GGNCC 5 cut(s) 170, 1236, 1263, 1309, 1346
ClaI ATCGAT 2 cut(s) 682, 1703
CseI GACGC 2 cut(s) 1056, 1420
Csp6I GTAC 1 cut(s) 447
CspCI CAANNNNNGTGG 2 cut(s) 699, 734
CviAII CATG 9 cut(s) 15, 260, 274, 305, 320, 566, 664, 826, 988
CviQI GTAC 1 cut(s) 447
DdeI CTNAG 1 cut(s) 1470
DpnI GATC 6 cut(s) 75, 685, 708, 1529, 1584, 1702
DpnII GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
DraIII CACNNNGTG 1 cut(s) 407
EaeI YGGCCR 2 cut(s) 864, 1026
EagI CGGCCG 2 cut(s) 864, 1026
Eam1104I CTCTTC 4 cut(s) 431, 848, 1010, 1178
EarI CTCTTC 4 cut(s) 431, 848, 1010, 1178
EciI GGCGGA 1 cut(s) 732
EclXI CGGCCG 2 cut(s) 864, 1026
Eco130I CCWWGG 5 cut(s) 282, 825, 987, 1111, 1223
Eco31I GGTCTC 1 cut(s) 1245
Eco47I GGWCC 1 cut(s) 1346
Eco52I CGGCCG 2 cut(s) 864, 1026
Eco57I CTGAAG 2 cut(s) 368, 1211
Eco88I CYCGRG 3 cut(s) 22, 1255, 1269
EcoT14I CCWWGG 5 cut(s) 282, 825, 987, 1111, 1223
ErhI CCWWGG 5 cut(s) 282, 825, 987, 1111, 1223
Esp3I CGTCTC 3 cut(s) 790, 952, 1073
FaeI CATG 9 cut(s) 18, 263, 277, 308, 323, 569, 667, 829, 991
FalI AAGNNNNNCTT 2 cut(s) 1095, 1127
FaqI GGGAC 1 cut(s) 1332
FatI CATG 9 cut(s) 14, 259, 273, 304, 319, 565, 663, 825, 987
FauI CCCGC 3 cut(s) 898, 1060, 1137
FauNDI CATATG 1 cut(s) 1318
FbaI TGATCA 1 cut(s) 1582
FblI GTMKAC 1 cut(s) 1633
FokI GGATG 3 cut(s) 1128, 1570, 1707
FspBI CTAG 4 cut(s) 219, 233, 1725, 1780
FspI TGCGCA 1 cut(s) 344
GlaI GCGC 4 cut(s) 344, 367, 906, 1669
GsuI CTGGAG 1 cut(s) 1623
HaeII RGCGCY 2 cut(s) 369, 908
HaeIII GGCC 8 cut(s) 171, 287, 866, 1028, 1222, 1238, 1265, 1310
HapII CCGG 8 cut(s) 702, 810, 863, 972, 1025, 1088, 1376, 1710
HgaI GACGC 2 cut(s) 1056, 1420
HhaI GCGC 4 cut(s) 345, 368, 907, 1670
Hin1I GRCGYC 1 cut(s) 1412
Hin1II CATG 9 cut(s) 18, 263, 277, 308, 323, 569, 667, 829, 991
Hin6I GCGC 4 cut(s) 343, 366, 905, 1668
HinP1I GCGC 4 cut(s) 343, 366, 905, 1668
HincII GTYRAC 3 cut(s) 720, 1634, 1756
HindII GTYRAC 3 cut(s) 720, 1634, 1756
HindIII AAGCTT 2 cut(s) 512, 610
HinfI GANTC 6 cut(s) 212, 389, 487, 587, 1493, 1595
HpaII CCGG 8 cut(s) 702, 810, 863, 972, 1025, 1088, 1376, 1710
HphI GGTGA 6 cut(s) 94, 115, 125, 748, 910, 1672
Hpy166II GTNNAC 4 cut(s) 133, 720, 1634, 1756
Hpy188I TCNGA 5 cut(s) 486, 586, 1072, 1250, 1594
Hpy188III TCNNGA 5 cut(s) 260, 386, 1376, 1433, 1640
Hpy8I GTNNAC 4 cut(s) 133, 720, 1634, 1756
Hpy99I CGWCG 6 cut(s) 806, 809, 968, 971, 1414, 1594
HpyCH4III ACNGT 4 cut(s) 446, 717, 1425, 1554
HpyCH4IV ACGT 5 cut(s) 371, 801, 963, 1082, 1286
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 1073, 1116, 1304, 1313, 1734
HpyF3I CTNAG 1 cut(s) 1470
HpySE526I ACGT 5 cut(s) 371, 801, 963, 1082, 1286
Hsp92I GRCGYC 1 cut(s) 1412
Hsp92II CATG 9 cut(s) 18, 263, 277, 308, 323, 569, 667, 829, 991
HspAI GCGC 4 cut(s) 343, 366, 905, 1668
Kpn2I TCCGGA 1 cut(s) 1375
KroI GCCGGC 2 cut(s) 809, 971
KroNI GCCGGC 2 cut(s) 811, 973
Ksp22I TGATCA 1 cut(s) 1582
Kzo9I GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
LguI GCTCTTC 1 cut(s) 431
LmnI GCTCC 3 cut(s) 69, 88, 1686
Lsp1109I GCAGC 5 cut(s) 266, 1094, 1228, 1315, 1459
LweI GCATC 3 cut(s) 106, 1063, 1106
MaeI CTAG 4 cut(s) 219, 233, 1725, 1780
MaeII ACGT 5 cut(s) 371, 801, 963, 1082, 1286
MaeIII GTNAC 2 cut(s) 1459, 1660
MalI GATC 6 cut(s) 75, 685, 708, 1529, 1584, 1702
MbiI CCGCTC 3 cut(s) 482, 791, 953
MboI GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
MboII GAAGA 9 cut(s) 260, 448, 835, 997, 1195, 1204, 1207, 1547, 1725
MflI RGATCY 1 cut(s) 706
MhlI GDGCHC 3 cut(s) 66, 135, 155
MluCI AATT 8 cut(s) 31, 179, 244, 505, 603, 1098, 1120, 1363
MlyI GAGTC 3 cut(s) 398, 481, 581
MmeI TCCRAC 1 cut(s) 1572
MroI TCCGGA 1 cut(s) 1375
MroNI GCCGGC 2 cut(s) 809, 971
MseI TTAA 2 cut(s) 50, 429
MslI CAYNNNNRTG 4 cut(s) 101, 338, 824, 986
MspA1I CMGCKG 2 cut(s) 1219, 1241
MspI CCGG 8 cut(s) 702, 810, 863, 972, 1025, 1088, 1376, 1710
MspR9I CCNGG 2 cut(s) 863, 1025
Mva1269I GAATGC 1 cut(s) 1514
MvnI CGCG 2 cut(s) 406, 1344
MwoI GCNNNNNNNGC 6 cut(s) 293, 1073, 1116, 1304, 1313, 1734
NaeI GCCGGC 2 cut(s) 811, 973
NciI CCSGG 2 cut(s) 863, 1025
NcoI CCATGG 2 cut(s) 825, 987
NdeI CATATG 1 cut(s) 1318
NdeII GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
NgoMIV GCCGGC 2 cut(s) 809, 971
NlaIII CATG 9 cut(s) 18, 263, 277, 308, 323, 569, 667, 829, 991
NlaIV GGNNCC 4 cut(s) 814, 976, 1176, 1348
NmeAIII GCCGAG 3 cut(s) 1102, 1260, 1324
NmuCI GTSAC 1 cut(s) 1660
NsbI TGCGCA 1 cut(s) 344
NspI RCATGY 3 cut(s) 18, 569, 667
NspV TTCGAA 2 cut(s) 900, 1062
PaeI GCATGC 2 cut(s) 569, 667
PagI TCATGA 1 cut(s) 259
PciSI GCTCTTC 1 cut(s) 431
PcsI WCGNNNNNNNCGW 3 cut(s) 780, 942, 1536
PctI GAATGC 1 cut(s) 1514
PdiI GCCGGC 2 cut(s) 811, 973
PfeI GAWTC 3 cut(s) 212, 1493, 1595
PleI GAGTC 3 cut(s) 397, 481, 581
PpsI GAGTC 3 cut(s) 397, 481, 581
Ppu21I YACGTR 1 cut(s) 372
PspN4I GGNNCC 4 cut(s) 814, 976, 1176, 1348
PspPI GGNCC 5 cut(s) 170, 1236, 1263, 1309, 1346
PsuI RGATCY 1 cut(s) 706
RsaI GTAC 1 cut(s) 448
RsaNI GTAC 1 cut(s) 447
RseI CAYNNNNRTG 4 cut(s) 101, 338, 824, 986
SalI GTCGAC 1 cut(s) 1632
SapI GCTCTTC 1 cut(s) 431
SaqAI TTAA 2 cut(s) 50, 429
Sau3AI GATC 6 cut(s) 73, 683, 706, 1527, 1582, 1700
Sau96I GGNCC 5 cut(s) 170, 1236, 1263, 1309, 1346
SchI GAGTC 3 cut(s) 398, 481, 581
ScrFI CCNGG 2 cut(s) 863, 1025
SduI GDGCHC 3 cut(s) 66, 135, 155
SfaNI GCATC 3 cut(s) 106, 1063, 1106
SfcI CTRYAG 1 cut(s) 1201
SfuI TTCGAA 2 cut(s) 900, 1062
SinI GGWCC 1 cut(s) 1346
SmiMI CAYNNNNRTG 4 cut(s) 101, 338, 824, 986
SphI GCATGC 2 cut(s) 569, 667
Sse9I AATT 8 cut(s) 31, 179, 244, 505, 603, 1098, 1120, 1363
SspMI CTAG 4 cut(s) 219, 233, 1725, 1780
StyD4I CCNGG 2 cut(s) 861, 1023
StyI CCWWGG 5 cut(s) 282, 825, 987, 1111, 1223
TaaI ACNGT 4 cut(s) 446, 717, 1425, 1554
TaiI ACGT 5 cut(s) 374, 804, 966, 1085, 1289
TaqI TCGA 9 cut(s) 434, 682, 693, 900, 1062, 1391, 1409, 1633, 1703
TasI AATT 8 cut(s) 31, 179, 244, 505, 603, 1098, 1120, 1363
TatI WGTACW 1 cut(s) 446
TfiI GAWTC 3 cut(s) 212, 1493, 1595
Tru1I TTAA 2 cut(s) 50, 429
Tru9I TTAA 2 cut(s) 50, 429
TscAI CASTG 5 cut(s) 449, 1300, 1559, 1735, 1756
TseFI GTSAC 1 cut(s) 1660
TseI GCWGC 5 cut(s) 254, 1107, 1216, 1328, 1447
Tsp45I GTSAC 1 cut(s) 1660
TspDTI ATGAA 2 cut(s) 17, 1409
TspGWI ACGGA 1 cut(s) 973
TspRI CASTG 5 cut(s) 449, 1300, 1559, 1735, 1756
VneI GTGCAC 1 cut(s) 131
VpaK11BI GGWCC 1 cut(s) 1346
XapI RAATTY 1 cut(s) 1098
XceI RCATGY 3 cut(s) 18, 569, 667
XcmI CCANNNNNNNNNTGG 2 cut(s) 823, 985
XmiI GTMKAC 1 cut(s) 1633
XspI CTAG 4 cut(s) 219, 233, 1725, 1780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.