Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001542.1

Orthogroup ID

OG0005424

Physical Location & Seq

Genomic Coordinates Forward (+)

15547 .. 26748

Gene Structure 11202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001542.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3183 bp

atggatgaagctgaggcacttggagatcgcatagccatcatggccaatggttctttgaaatgctgcggaagttcccttttcttgaagcatcagtatggggttggttatactctaactttagtgaagtctgcacccactgcctctatggctgctgatattgtttaccgccatatcccatcggcaacgtgtgtgagtgaggttggaactgagatttcctttaagcttccattggcatcctcaacatccttcgaaagtatgtttagagaaattgagagttgcatgggatcatccacatcaaacttagaaacaagttgtgatgagaaggactatattggcattgaaagttatggcatatctgtcacaactttggaggaggtgttcctgagggttgcaggatgcgattatgacgaagctgcttgttttgaccagaagaatggtccactgtgccctgagtctctgatttctcaaacttctcatgatcctacgcacaaacagattcttcactcgaagaaatcttttgcttattataaagagattcttggggtcttatttacaatggtgggaagagcctgtggtttaatttttgctacagtgttaagtttcttaaacttcttaggtgtgcaatgctgtggctgttgtatcatttcaaggtcaacattttggaggcattctaaagtattattcataaagagggcaatatctgcccgcagagaccgtaaaacaattgttttccagcttgtaattcctgcagttttcttattttttggtcttttatttctcaagctcaagccacatcctgatcaggagtctgttaccttcacaacttcacattttaatccactattacgtggtggtggtggtggtggtccaattccttttgatctatcccggcctattgcacaggaggttgcagaatacatagaagggggttggatacaaaccttcaaacctagtgggtataaattccccaactcagagaaggcattgaatgatgcaattgaggtagcaggggaaactctgggacctgctttactttcaatgagtgaatttttgatgtccagctttaatgaatcttaccagtcaaggtatggcgcagttgtgatggatgatcagagtgatgatgggagtttagggtacactgtgctacacaacagttcctgtcagcatgctgccccaacctttatcaatttagtaaatgctgcaattcttcggcttgcttctcgtaataagaatgtgacaattcaaacacgcaatcaccctttgccaatgacagaaagtcaacatctgcaacggcatgatttggatgctttctctgctgcagttattgttagtatcgccttctccttcattcctgcgtcatttgctgttcctatagtgaaggaacgtgaagtaaaagctaaacaccaacagcttattagtggagtttccatactgtcatattggacttctacatacatatgggacttcatcagcttcctctttccttcatcttttgccatagttcttttttacatatttggtctggaccagtttattggaaggggatgtttactgtcgactgtcgtcatgtttttagcatacggattagcgattgcgtcatcaacatactgccttacgtttttcttttctgatcacactatggctcagaatgtggttctcttggtccactttttcacgggactcattcttatggttatctcattcattatggggcttataaagacgacgacaagtgcaaattcttttcttaagaactttttcagattatctccaggattttgctttgctgacggacttgcttcactggctcttctacgtcaagatatgaaaaataagagcaataaggccttcgattggaatgttactggtggctcaatctgctacctttgtattgagagcatttgttacttccttttggcactcggtcttgaaatcttgcctttcaataaattgacactagccacactcaaggagtggtggaagagtattaaaagtatcccacctagcacttcaagttatcgagagccccttctgacttcttccgcagaatctgtcactctggaccttgatgaggacacagatgtgaaggcagaaagaactagggtactttcaggttccattgacaatgccatcatctacttgcgtaatcttcgtaaggtgtatccaggaggacagcagcatgctacaaaggttgcagtacattcattgactttttcagttcaagaaggggaatgtttcggttttttaggaacaaatggagctgggaagaccactactctgtctatgttgactggtgaggaatctcctacagatgggactgcctgtatatttggcaaggatatttcttccaatcccaaggctgctcgtcaacatattgggttttgcccacagtttgatgctctgttagaatatttaactgttcaagagcatcttgagctttatgccacgataaaaggagtaccagataataagatggctgaggttgtaatggaaaagttggtggagtttgacttgttaaagcatgccggcaagccatcattttccctcagtgggggaaacaagcgaaaattatctgtcgcaattgctatgattggagatcctcctatagttattcttgatgaaccatcaacaggtatggatccaattgccaaaagattcatgtgggaagtgatatctcgtttatcgaccagacgaggaaagacagcagtgatactgactacccatagtatgaatgaagctcaagctctgtgcacccgtatcggaatcatggttggaggccaattacggtgcattggaagtccccagcatttaaaaactcgatttggaaatcatcttgagctagaggttaaacctattgaagtcagctctgtggacttggacaagctttgccgagttatccaagaaaggctctcgtatgttccttctcatccaatgagcttacttgatggccttgaagtctgcattggtgccactgactccattgtggcagaaaatgcatcggtggcagagattagtttatcgcgagaaatgataattatgattggacgatggcttgggaatgaagaaagaataaagccgcttatatcttcaacaccactttcagatggggtgcttggtgaacagttatttgagcagttagatcgagatggtatgagaaagtttactttgaaatctgtgcattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

1060

Amino Acids

116.71

Weight (kDa)

6.32

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41700 AT2G41700
fragaria_vesca	FvH4_6g24100 FvH4_6g24100
malus_domestica	MD12G1079400.v1.1 MD14G1075700.v1.1
prunus_persica	Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1 Prupe.7G058100_v2.0.a1
pyrus_communis	pycom12g06660
rosa_chinensis	RchiOBHm_Chr3g0482761
rosa_laevigata	RLG00000023331
rosa_multiflora	Rmu_co8213162.1_g000001 Rmu_sc0001542.1_g000002 Rmu_sc0021223.1_g000001
rosa_roxburghii	Rroxscaffold_6G00398990
rosa_rugosa	Rorug03G0198800 Rorug03G0198900
rosa_samantha	Rh3AG249700 Rh3BG285700 Rh3CG283300 Rh3DG279300
rosa_wichuraiana	Rw3G022560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	528, 1718
Acc36I	ACCTGC	1 cut(s)	1033
AccB1I	GGYRCC	1 cut(s)	2966
AccI	GTMKAC	1 cut(s)	1556
AccII	CGCG	1 cut(s)	3022
AciI	CCGC	5 cut(s)	66, 166, 706, 2043, 3077
AclWI	GGATC	5 cut(s)	292, 473, 2591, 2633, 2646
AcoI	YGGCCR	1 cut(s)	42
AcsI	RAATTY	3 cut(s)	962, 1046, 1738
AfaI	GTAC	4 cut(s)	1136, 2106, 2199, 2460
AfiI	CCNNNNNNNGG	6 cut(s)	1854, 2071, 2312, 2550, 2551, 2630
AflII	CTTAAG	1 cut(s)	1748
AflIII	ACRYGT	1 cut(s)	185
AhdI	GACNNNNNGTC	1 cut(s)	1275
AjnI	CCWGG	2 cut(s)	1771, 2164
AjuI	GAANNNNNNNTTGG	2 cut(s)	2946, 2978
AleI	CACNNNNGTG	1 cut(s)	2081
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
Alw21I	GWGCWC	1 cut(s)	2753
Alw26I	GTCTC	2 cut(s)	459, 705
Alw44I	GTGCAC	1 cut(s)	2749
AlwI	GGATC	5 cut(s)	292, 473, 2591, 2633, 2646
AlwNI	CAGNNNCTG	2 cut(s)	1158, 2051
AoxI	GGCC	5 cut(s)	42, 890, 1845, 2776, 2947
ApaLI	GTGCAC	1 cut(s)	2749
ApeKI	GCWGC	8 cut(s)	63, 149, 413, 1169, 1199, 1316, 2176, 2360
ApoI	RAATTY	3 cut(s)	962, 1046, 1738
Asp700I	GAANNNNTTC	1 cut(s)	1757
AspLEI	GCGC	1 cut(s)	1094
AspS9I	GGNCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
AsuC2I	CCSGG	1 cut(s)	889
AsuHPI	GGTGA	3 cut(s)	1247, 2306, 3128
AsuII	TTCGAA	1 cut(s)	249
AvaII	GGWCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
AxyI	CCTNAGG	1 cut(s)	383
BaeGI	GKGCMC	2 cut(s)	449, 2753
BalI	TGGCCA	1 cut(s)	44
BamHI	GGATCC	1 cut(s)	2638
BanI	GGYRCC	1 cut(s)	2966
BanII	GRGCYC	1 cut(s)	2028
BbsI	GAAGAC	1 cut(s)	2273
Bbv12I	GWGCWC	1 cut(s)	2753
BbvCI	CCTCAGC	2 cut(s)	12, 2478
BbvI	GCAGC	8 cut(s)	50, 136, 400, 1156, 1186, 1303, 2188, 2347
BceAI	ACGGC	1 cut(s)	1307
BcgI	CGANNNNNNTGC	4 cut(s)	2740, 2774, 3122, 3156
BciT130I	CCWGG	2 cut(s)	1773, 2166
BciVI	GTATCC	3 cut(s)	927, 2006, 2172
BclI	TGATCA	3 cut(s)	799, 1108, 1630
BcnI	CCSGG	1 cut(s)	889
BcoDI	GTCTC	2 cut(s)	459, 705
BfaI	CTAG	5 cut(s)	951, 1958, 2004, 2100, 2840
BfmI	CTRYAG	6 cut(s)	588, 747, 1317, 1371, 2307, 2604
BfrI	CTTAAG	1 cut(s)	1748
BfuAI	ACCTGC	1 cut(s)	1033
BfuI	GTATCC	3 cut(s)	927, 2006, 2172
BglI	GCCNNNNNGGC	2 cut(s)	41, 146
BisI	GCNGC	9 cut(s)	64, 150, 414, 1170, 1200, 1317, 2177, 2361, 3077
BlsI	GCNGC	9 cut(s)	65, 151, 415, 1171, 1201, 1318, 2178, 2362, 3078
Bme1390I	CCNGG	3 cut(s)	889, 1773, 2166
Bme18I	GGWCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
BmeRI	GACNNNNNGTC	1 cut(s)	1275
BmgT120I	GGNCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
BmiI	GGNNCC	4 cut(s)	1023, 2116, 2640, 2968
BmrFI	CCNGG	3 cut(s)	889, 1773, 2166
BmsI	GCATC	8 cut(s)	97, 242, 386, 982, 1294, 2386, 2437, 3005
BoxI	GACNNNNGTC	1 cut(s)	1562
BpiI	GAAGAC	1 cut(s)	2273
BpmI	CTGGAG	1 cut(s)	1755
Bpu10I	CCTNAGC	2 cut(s)	12, 2478
Bpu14I	TTCGAA	1 cut(s)	249
BpuEI	CTTGAG	6 cut(s)	764, 770, 1952, 2453, 2724, 2855
BpuMI	CCSGG	1 cut(s)	889
BsaAI	YACGTR	1 cut(s)	848
BsaI	GGTCTC	1 cut(s)	705
BsaJI	CCNNGG	1 cut(s)	2355
BsaXI	ACNNNNNCTCC	2 cut(s)	362, 392
Bsc4I	CCNNNNNNNGG	6 cut(s)	1854, 2071, 2312, 2550, 2551, 2630
Bse118I	RCCGGY	1 cut(s)	2525
Bse1I	ACTGG	5 cut(s)	1078, 1528, 1809, 1870, 2296
Bse21I	CCTNAGG	1 cut(s)	383
Bse3DI	GCAATG	1 cut(s)	629
BseBI	CCWGG	2 cut(s)	1773, 2166
BseDI	CCNNGG	1 cut(s)	2355
BseLI	CCNNNNNNNGG	6 cut(s)	1854, 2071, 2312, 2550, 2551, 2630
BseMI	GCAATG	1 cut(s)	629
BseMII	CTCAG	7 cut(s)	198, 374, 441, 987, 1658, 2469, 2560
BseNI	ACTGG	5 cut(s)	1078, 1528, 1809, 1870, 2296
BseRI	GAGGAG	1 cut(s)	386
BseSI	GKGCMC	2 cut(s)	449, 2753
BseXI	GCAGC	8 cut(s)	50, 136, 400, 1156, 1186, 1303, 2188, 2347
BseYI	CCCAGC	2 cut(s)	2261, 2802
BsgI	GTGCAG	1 cut(s)	114
Bsh1236I	CGCG	1 cut(s)	3022
BshFI	GGCC	5 cut(s)	44, 892, 1847, 2778, 2949
BshNI	GGYRCC	1 cut(s)	2966
BsiHKAI	GWGCWC	1 cut(s)	2753
BsiSI	CCGG	2 cut(s)	889, 2526
BslFI	GGGAC	5 cut(s)	1035, 1475, 1692, 2329, 2784
BslI	CCNNNNNNNGG	6 cut(s)	1854, 2071, 2312, 2550, 2551, 2630
BsmAI	GTCTC	2 cut(s)	459, 705
BsmFI	GGGAC	5 cut(s)	1035, 1475, 1692, 2329, 2784
BsmI	GAATGC	1 cut(s)	667
BsnI	GGCC	5 cut(s)	44, 892, 1847, 2778, 2949
Bso31I	GGTCTC	1 cut(s)	705
Bsp119I	TTCGAA	1 cut(s)	249
Bsp1286I	GDGCHC	3 cut(s)	449, 2028, 2753
Bsp68I	TCGCGA	1 cut(s)	3022
BspACI	CCGC	5 cut(s)	66, 166, 706, 2043, 3077
BspANI	GGCC	5 cut(s)	44, 892, 1847, 2778, 2949
BspCNI	CTCAG	8 cut(s)	4, 199, 375, 442, 986, 1657, 2470, 2559
BspFNI	CGCG	1 cut(s)	3022
BspHI	TCATGA	1 cut(s)	475
BspLI	GGNNCC	4 cut(s)	1023, 2116, 2640, 2968
BspMAI	CTGCAG	2 cut(s)	751, 1321
BspMI	ACCTGC	1 cut(s)	1033
BspPI	GGATC	5 cut(s)	292, 473, 2591, 2633, 2646
BspQI	GCTCTTC	2 cut(s)	559, 1815
BspT104I	TTCGAA	1 cut(s)	249
BspT107I	GGYRCC	1 cut(s)	2966
BspTI	CTTAAG	1 cut(s)	1748
BspTNI	GGTCTC	1 cut(s)	705
BsrDI	GCAATG	1 cut(s)	629
BsrFI	RCCGGY	1 cut(s)	2525
BsrI	ACTGG	5 cut(s)	1078, 1528, 1809, 1870, 2296
BssAI	RCCGGY	1 cut(s)	2525
BssECI	CCNNGG	1 cut(s)	2355
BssT1I	CCWWGG	1 cut(s)	2355
Bst2UI	CCWGG	2 cut(s)	1773, 2166
Bst6I	CTCTTC	3 cut(s)	559, 1815, 1976
BstAFI	CTTAAG	1 cut(s)	1748
BstAPI	GCANNNNNTGC	3 cut(s)	137, 701, 2993
BstBAI	YACGTR	1 cut(s)	848
BstBI	TTCGAA	1 cut(s)	249
BstC8I	GCNNGC	7 cut(s)	706, 1167, 1215, 2181, 2523, 2527, 2531
BstENI	CCTNNNNNAGG	1 cut(s)	2069
BstFNI	CGCG	1 cut(s)	3022
BstHHI	GCGC	1 cut(s)	1094
BstMAI	GTCTC	2 cut(s)	459, 705
BstNI	CCWGG	2 cut(s)	1773, 2166
BstNSI	RCATGY	3 cut(s)	1169, 2183, 2525
BstPAI	GACNNNNGTC	1 cut(s)	1562
BstSCI	CCNGG	3 cut(s)	887, 1771, 2164
BstSFI	CTRYAG	6 cut(s)	588, 747, 1317, 1371, 2307, 2604
BstSLI	GKGCMC	2 cut(s)	449, 2753
BstUI	CGCG	1 cut(s)	3022
BstV1I	GCAGC	8 cut(s)	50, 136, 400, 1156, 1186, 1303, 2188, 2347
BstV2I	GAAGAC	1 cut(s)	2273
BstX2I	RGATCY	2 cut(s)	2596, 2638
BstXI	CCANNNNNNTGG	2 cut(s)	434, 1535
BstYI	RGATCY	2 cut(s)	2596, 2638
Bsu36I	CCTNAGG	1 cut(s)	383
BsuI	GTATCC	3 cut(s)	927, 2006, 2172
BsuRI	GGCC	5 cut(s)	44, 892, 1847, 2778, 2949
BtsI	GCAGTG	2 cut(s)	135, 2712
BtsIMutI	CAGTG	8 cut(s)	135, 440, 597, 1137, 1802, 2554, 2712, 2970
BtuMI	TCGCGA	1 cut(s)	3022
BveI	ACCTGC	1 cut(s)	1033
Cac8I	GCNNGC	7 cut(s)	706, 1167, 1215, 2181, 2523, 2527, 2531
CaiI	CAGNNNCTG	2 cut(s)	1158, 2051
CciI	TCATGA	1 cut(s)	475
CfoI	GCGC	1 cut(s)	1094
Cfr10I	RCCGGY	1 cut(s)	2525
Cfr13I	GGNCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
CseI	GACGC	2 cut(s)	1344, 1584
Csp6I	GTAC	4 cut(s)	1135, 2105, 2198, 2459
CspCI	CAANNNNNGTGG	2 cut(s)	934, 969
CviQI	GTAC	4 cut(s)	1135, 2105, 2198, 2459
DraI	TTTAAA	1 cut(s)	2811
DriI	GACNNNNNGTC	1 cut(s)	1275
EaeI	YGGCCR	1 cut(s)	42
Eam1104I	CTCTTC	3 cut(s)	559, 1815, 1976
Eam1105I	GACNNNNNGTC	1 cut(s)	1275
EarI	CTCTTC	3 cut(s)	559, 1815, 1976
Eco130I	CCWWGG	1 cut(s)	2355
Eco147I	AGGCCT	1 cut(s)	1847
Eco24I	GRGCYC	1 cut(s)	2028
Eco31I	GGTCTC	1 cut(s)	705
Eco32I	GATATC	1 cut(s)	2673
Eco47I	GGWCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
Eco81I	CCTNAGG	1 cut(s)	383
EcoNI	CCTNNNNNAGG	1 cut(s)	2069
EcoO109I	RGGNCCY	1 cut(s)	1022
EcoRII	CCWGG	2 cut(s)	1771, 2164
EcoRV	GATATC	1 cut(s)	2673
EcoT14I	CCWWGG	1 cut(s)	2355
EcoT22I	ATGCAT	1 cut(s)	2998
EcoT38I	GRGCYC	1 cut(s)	2028
ErhI	CCWWGG	1 cut(s)	2355
FalI	AAGNNNNNCTT	4 cut(s)	522, 554, 2415, 2447
FaqI	GGGAC	5 cut(s)	1035, 1475, 1692, 2329, 2784
FauI	CCCGC	1 cut(s)	713
FauNDI	CATATG	1 cut(s)	1457
FbaI	TGATCA	3 cut(s)	799, 1108, 1630
FblI	GTMKAC	1 cut(s)	1556
Fnu4HI	GCNGC	9 cut(s)	64, 150, 414, 1170, 1200, 1317, 2177, 2361, 3077
FriOI	GRGCYC	1 cut(s)	2028
Fsp4HI	GCNGC	9 cut(s)	64, 150, 414, 1170, 1200, 1317, 2177, 2361, 3077
FspBI	CTAG	5 cut(s)	951, 1958, 2004, 2100, 2840
GlaI	GCGC	1 cut(s)	1093
GluI	GCNGC	9 cut(s)	64, 150, 414, 1170, 1200, 1317, 2177, 2361, 3077
GsaI	CCCAGC	2 cut(s)	2265, 2806
GsuI	CTGGAG	1 cut(s)	1755
HaeIII	GGCC	5 cut(s)	44, 892, 1847, 2778, 2949
HapII	CCGG	2 cut(s)	889, 2526
HgaI	GACGC	2 cut(s)	1344, 1584
HhaI	GCGC	1 cut(s)	1094
Hin6I	GCGC	1 cut(s)	1092
HinP1I	GCGC	1 cut(s)	1092
HincII	GTYRAC	5 cut(s)	654, 1280, 1557, 2289, 2369
HindII	GTYRAC	5 cut(s)	654, 1280, 1557, 2289, 2369
HindIII	AAGCTT	2 cut(s)	221, 2882
HpaII	CCGG	2 cut(s)	889, 2526
HphI	GGTGA	3 cut(s)	1247, 2306, 3128
Hpy188I	TCNGA	9 cut(s)	459, 976, 1113, 1630, 1647, 1763, 2034, 2762, 3103
Hpy99I	CGWCG	1 cut(s)	1729
HpyCH4IV	ACGT	5 cut(s)	185, 847, 1384, 1616, 1816
HpySE526I	ACGT	5 cut(s)	185, 847, 1384, 1616, 1816
HspAI	GCGC	1 cut(s)	1092
KroI	GCCGGC	1 cut(s)	2525
KroNI	GCCGGC	1 cut(s)	2527
Ksp22I	TGATCA	3 cut(s)	799, 1108, 1630
LguI	GCTCTTC	2 cut(s)	559, 1815
LmnI	GCTCC	1 cut(s)	2258
Lsp1109I	GCAGC	8 cut(s)	50, 136, 400, 1156, 1186, 1303, 2188, 2347
LweI	GCATC	8 cut(s)	97, 242, 386, 982, 1294, 2386, 2437, 3005
MaeI	CTAG	5 cut(s)	951, 1958, 2004, 2100, 2840
MaeII	ACGT	5 cut(s)	185, 847, 1384, 1616, 1816
MaeIII	GTNAC	6 cut(s)	358, 811, 1234, 1861, 1904, 2053
MfeI	CAATTG	4 cut(s)	723, 996, 2580, 2643
MflI	RGATCY	2 cut(s)	2596, 2638
MhlI	GDGCHC	3 cut(s)	449, 2028, 2753
MlsI	TGGCCA	1 cut(s)	44
MluNI	TGGCCA	1 cut(s)	44
MlyI	GAGTC	4 cut(s)	461, 815, 1674, 2969
MmeI	TCCRAC	3 cut(s)	181, 911, 2752
Mox20I	TGGCCA	1 cut(s)	44
Mph1103I	ATGCAT	1 cut(s)	2998
MroNI	GCCGGC	1 cut(s)	2525
MroXI	GAANNNNTTC	1 cut(s)	1757
MscI	TGGCCA	1 cut(s)	44
MslI	CAYNNNNRTG	4 cut(s)	93, 1456, 1688, 2081
Msp20I	TGGCCA	1 cut(s)	44
MspCI	CTTAAG	1 cut(s)	1748
MspI	CCGG	2 cut(s)	889, 2526
MspR9I	CCNGG	3 cut(s)	889, 1773, 2166
MunI	CAATTG	4 cut(s)	723, 996, 2580, 2643
Mva1269I	GAATGC	1 cut(s)	667
MvaI	CCWGG	2 cut(s)	1773, 2166
MvnI	CGCG	1 cut(s)	3022
NaeI	GCCGGC	1 cut(s)	2527
NciI	CCSGG	1 cut(s)	889
NdeI	CATATG	1 cut(s)	1457
NgoMIV	GCCGGC	1 cut(s)	2525
NlaIV	GGNNCC	4 cut(s)	1023, 2116, 2640, 2968
NmeAIII	GCCGAG	1 cut(s)	2915
NmuCI	GTSAC	3 cut(s)	358, 1234, 2053
NruI	TCGCGA	1 cut(s)	3022
NsiI	ATGCAT	1 cut(s)	2998
NspI	RCATGY	3 cut(s)	1169, 2183, 2525
NspV	TTCGAA	1 cut(s)	249
OliI	CACNNNNGTG	1 cut(s)	2081
PaeI	GCATGC	3 cut(s)	1169, 2183, 2525
PagI	TCATGA	1 cut(s)	475
PceI	AGGCCT	1 cut(s)	1847
PciSI	GCTCTTC	2 cut(s)	559, 1815
PctI	GAATGC	1 cut(s)	667
PdiI	GCCGGC	1 cut(s)	2527
PdmI	GAANNNNTTC	1 cut(s)	1757
PfeI	GAWTC	7 cut(s)	496, 535, 1070, 2048, 2300, 2655, 2763
PfoI	TCCNGGA	2 cut(s)	1771, 2164
PkrI	GCNGC	9 cut(s)	65, 151, 415, 1171, 1201, 1318, 2178, 2362, 3078
PleI	GAGTC	4 cut(s)	460, 814, 1674, 2969
PpsI	GAGTC	4 cut(s)	460, 814, 1674, 2969
Ppu21I	YACGTR	1 cut(s)	848
PpuMI	RGGWCCY	1 cut(s)	1022
PshAI	GACNNNNGTC	1 cut(s)	1562
PsiI	TTATAA	2 cut(s)	528, 1718
Psp5II	RGGWCCY	1 cut(s)	1022
Psp6I	CCWGG	2 cut(s)	1771, 2164
PspFI	CCCAGC	2 cut(s)	2261, 2802
PspGI	CCWGG	2 cut(s)	1771, 2164
PspN4I	GGNNCC	4 cut(s)	1023, 2116, 2640, 2968
PspPI	GGNCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
PspPPI	RGGWCCY	1 cut(s)	1022
PstI	CTGCAG	2 cut(s)	751, 1321
PstNI	CAGNNNCTG	2 cut(s)	1158, 2051
PsuI	RGATCY	2 cut(s)	2596, 2638
RruI	TCGCGA	1 cut(s)	3022
RsaI	GTAC	4 cut(s)	1136, 2106, 2199, 2460
RsaNI	GTAC	4 cut(s)	1135, 2105, 2198, 2459
RseI	CAYNNNNRTG	4 cut(s)	93, 1456, 1688, 2081
SalI	GTCGAC	1 cut(s)	1555
SapI	GCTCTTC	2 cut(s)	559, 1815
SatI	GCNGC	9 cut(s)	64, 150, 414, 1170, 1200, 1317, 2177, 2361, 3077
Sau96I	GGNCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
SchI	GAGTC	4 cut(s)	461, 815, 1674, 2969
ScrFI	CCNGG	3 cut(s)	889, 1773, 2166
SduI	GDGCHC	3 cut(s)	449, 2028, 2753
SfaNI	GCATC	8 cut(s)	97, 242, 386, 982, 1294, 2386, 2437, 3005
SfcI	CTRYAG	6 cut(s)	588, 747, 1317, 1371, 2307, 2604
SfuI	TTCGAA	1 cut(s)	249
SinI	GGWCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
SmiMI	CAYNNNNRTG	4 cut(s)	93, 1456, 1688, 2081
SmlI	CTYRAG	7 cut(s)	779, 785, 1748, 1967, 2432, 2739, 2834
SmoI	CTYRAG	7 cut(s)	779, 785, 1748, 1967, 2432, 2739, 2834
SphI	GCATGC	3 cut(s)	1169, 2183, 2525
SseBI	AGGCCT	1 cut(s)	1847
SsiI	CCGC	5 cut(s)	66, 166, 706, 2043, 3077
SspI	AATATT	1 cut(s)	2411
SspMI	CTAG	5 cut(s)	951, 1958, 2004, 2100, 2840
StuI	AGGCCT	1 cut(s)	1847
StyD4I	CCNGG	3 cut(s)	887, 1771, 2164
StyI	CCWWGG	1 cut(s)	2355
TaiI	ACGT	5 cut(s)	188, 850, 1387, 1619, 1819
TaqI	TCGA	8 cut(s)	249, 506, 1556, 1851, 2020, 2684, 2818, 3142
TaqII	GACCGA	1 cut(s)	1913
TatI	WGTACW	1 cut(s)	2197
TauI	GCSGC	1 cut(s)	3079
TfiI	GAWTC	7 cut(s)	496, 535, 1070, 2048, 2300, 2655, 2763
TscAI	CASTG	8 cut(s)	142, 447, 597, 1144, 1809, 2554, 2712, 2977
TseFI	GTSAC	3 cut(s)	358, 1234, 2053
TseI	GCWGC	8 cut(s)	63, 149, 413, 1169, 1199, 1316, 2176, 2360
Tsp45I	GTSAC	3 cut(s)	358, 1234, 2053
TspGWI	ACGGA	2 cut(s)	1596, 1806
TspRI	CASTG	8 cut(s)	142, 447, 597, 1144, 1809, 2554, 2712, 2977
Vha464I	CTTAAG	1 cut(s)	1748
VneI	GTGCAC	1 cut(s)	2749
VpaK11BI	GGWCC	6 cut(s)	437, 866, 1022, 1525, 1663, 2062
XagI	CCTNNNNNAGG	1 cut(s)	2069
XapI	RAATTY	3 cut(s)	962, 1046, 1738
XceI	RCATGY	3 cut(s)	1169, 2183, 2525
XcmI	CCANNNNNNNNNTGG	2 cut(s)	142, 1085
XmiI	GTMKAC	1 cut(s)	1556
XmnI	GAANNNNTTC	1 cut(s)	1757
XspI	CTAG	5 cut(s)	951, 1958, 2004, 2100, 2840
Zsp2I	ATGCAT	1 cut(s)	2998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.