Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001616.1

Orthogroup ID

OG0002467

Physical Location & Seq

Genomic Coordinates Forward (+)

231729 .. 242497

Gene Structure 10769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

atggcgggtagaaagcttgttcgagatttgttcctccacagacaatcccttcttcttcttcagtctcgacaacaggtttcaggcacgagaattcgattgctttcggaaaatgggtattgggggaatcgtcgattcagtgtcttcaatgagttttcgaagcaggtcaaggaggaaaccaataaaaatccacaatttaaaaagacggtcaaggagctgaaggagcaagtggaagagctcaagggggtgaaagaagatctgaaagtcagaacgaagcagacaacggagcagctgtacaagcaggtggatggtgtttggacagaggctgaagaagcagcaaagaaggtctctgcaaatgtaaaagagaagatctcggctgccacagaagaggttaaaggatcttttggaattgggaaagagcaggcttcagggccttctggtgcttcagctgatcatgttgctgatgaaaaagatggaagtaaggcctcgtcctcggaagataaacaccagcactcagggtctagtgatactgcagaaacattatttggaaaatttaggtcaagggtgtcttcattgaatgtttcctctgtctttcatagattcaaggaagcaaagtttgttgacatggccaaaaaaggatatgatattgtaaaggatgagttaaatggtagtccaagtaagaaaaagcatctagggtttgacccttcttccatcccacgagttaaaagaagtgcaacaagtgacattgctattgtacccaccaaacaatctcgttggagcaaaaagtgggaggctttcagaatgaagatgcaagggaatcctctattcaagcgtatcagtgggatgagtgaaccagttaaaataaaaagcgaggagattatggatgacatgaaggaacgctgggaaactactgatagcccaatagttcacaaaattcaggatatcaatgaagctatttttcaagaaacaaatgctgctgcatcaatcaaggagatccatgcccgagatccatctttctctttaccagattttgtggtagaagttcagaatgcagtcaaacctgtgttaaatgcttacatgaagggagatattgaaacattgaagaagtactgtgctaatgaggtgattgagcggtgtaaagccgagcgtcaggcttttcaaagccatggcatcttttttgataacaagattctacatatatctgaggtggaagtaagagataccaaactgatgggagactctcccataatcattgtagcgttccaaacacagcaagtctattgtgtacgtgataaaaatggtgcaataacagaaggcagccaggatacaatccaaacagtgtattacgcctgggccatgcaaccttgggatcccgaagaacttcctgaaggtgctcttttcccgatatggagaaaaaggtacgacattttgagggttttttgtgagcaatggatgaagggattgggaagagtgatcttgaccataacggttttgattttggatagcaaacatgggagccttagtccatgtggtgccacattttggaaaagaggccaagataatgtctttgtctctacccctaaaactttgctgtgccaaaatgataccttcaagaatcatcttgggatagcttttggtgactcacaataccaggaaaatgtgtcggccgtcgacgtcaagcttcaagtcagaagaaatcgacgtcgaggttcggtgctggagcattacaaatcgacgcgacgaggtggatgtagagggcgaagtcggcgaggaagagtaaaaggtcagtggctactccgacgaggactggagattcggagaagtgagagaggtcggtggcgagcttcggagctggatgatttgcatttgaagaagttgaaagtcactgaaggtgaggatgagcatggagagacactatgtgggtcttgtggagagaactatgcatctgatgaattttggatttgctgcgatgtctgtgagaagtggttccatggcaagtgtgagaagaatgaaagggtgtttgagattgcaaaggctatggcttgggttccagttggagcagacaggaataagacatatcttcatcttaaccaatggataccagatgaacttaaatttgatctgaactgccttctgtatacacatggtaagctctgccgcaagtgcatcaagaaaggaggtagcactagtaagcagcaagaaaaggaatacgaggatatcaattccaacttcatgtatgcaatctgcaatgaagtcgtgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005744 GO:0005759 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017111 GO:0019866 GO:0022804 GO:0022857 GO:0022884 GO:0030150 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032991 GO:0033036 GO:0033220 GO:0033365 GO:0034613 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0098796 GO:0098798 GO:0098800 GO:1904680 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tim44

Protein Analysis

752

Amino Acids

85.99

Weight (kDa)

9.08

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tim44	PF04280	325 - 453	8e-38	Tim44-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20510 AT2G20510 AT2G20510 AT2G20510 AT2G36070
fragaria_vesca	FvH4_2g21470 FvH4_2g21470 FvH4_4g12040 FvH4_4g12040 FvH4_4g12040 FvH4_4g12040
malus_domestica	MD05G1197100.v1.1 MD09G1008600.v1.1
prunus_persica	Prupe.8G223600_v2.0.a1
pyrus_communis	pycom05g18420 pycom10g15910
rosa_chinensis	RchiOBHm_Chr4g0409381 RchiOBHm_Chr5g0013581 RchiOBHm_Chr6g0288111
rosa_laevigata	RLG00000012438 RLG00000032032
rosa_multiflora	Rmu_co8365065.1_g000001 Rmu_sc0001616.1_g000049 Rmu_sc0001851.1_g000030 Rmu_sc0010766.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062990 Rroxscaffold_5G00353910 Rroxscaffold_7G00180510
rosa_rugosa	Rorug04G0093400 Rorug06G0194200
rosa_samantha	Rh4AG155900 Rh4BG155100 Rh4CG165200 Rh4DG149000 Rh5BG102300 Rh6AG304400 Rh6BG310400 Rh6CG318500 Rh6DG303400
rosa_wichuraiana	Rw4G012760 Rw6G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	289
AatII	GACGTC	2 cut(s)	1674, 1702
Acc36I	ACCTGC	2 cut(s)	151, 289
AccB1I	GGYRCC	1 cut(s)	1529
AccB7I	CCANNNNNTGG	1 cut(s)	1539
AccBSI	CCGCTC	1 cut(s)	1129
AccI	GTMKAC	2 cut(s)	1668, 2135
AccII	CGCG	1 cut(s)	1735
AciI	CCGC	3 cut(s)	5, 1129, 2155
AclWI	GGATC	5 cut(s)	403, 985, 998, 1361, 1374
AcoI	YGGCCR	2 cut(s)	624, 1662
AcsI	RAATTY	5 cut(s)	90, 548, 930, 1949, 2111
AcuI	CTGAAG	7 cut(s)	44, 236, 345, 408, 426, 1404, 1905
AcyI	GRCGYC	2 cut(s)	1671, 1699
AdeI	CACNNNGTG	1 cut(s)	1916
AfaI	GTAC	5 cut(s)	293, 753, 1106, 1284, 1418
AfiI	CCNNNNNNNGG	1 cut(s)	1539
AhlI	ACTAGT	1 cut(s)	2183
AjnI	CCWGG	3 cut(s)	1317, 1346, 1647
AjuI	GAANNNNNNNTTGG	2 cut(s)	525, 557
Alw21I	GWGCWC	2 cut(s)	237, 1393
Alw26I	GTCTC	5 cut(s)	69, 349, 1227, 1573, 1901
AlwI	GGATC	5 cut(s)	403, 985, 998, 1361, 1374
AlwNI	CAGNNNCTG	1 cut(s)	323
Ama87I	CYCGRG	1 cut(s)	999
AoxI	GGCC	6 cut(s)	428, 480, 624, 1350, 1549, 1662
ApeKI	GCWGC	8 cut(s)	286, 332, 374, 971, 974, 1314, 1962, 2191
ApoI	RAATTY	5 cut(s)	90, 548, 930, 1949, 2111
ArsI	GACNNNNNNTTYG	2 cut(s)	1794, 1826
Asp700I	GAANNNNTTC	2 cut(s)	1377, 1982
AspS9I	GGNCC	2 cut(s)	428, 1350
AsuHPI	GGTGA	4 cut(s)	256, 1132, 1646, 1901
AsuII	TTCGAA	1 cut(s)	155
AvaI	CYCGRG	1 cut(s)	999
BalI	TGGCCA	1 cut(s)	626
BamHI	GGATCC	1 cut(s)	1366
BanI	GGYRCC	1 cut(s)	1529
BanII	GRGCYC	1 cut(s)	237
BauI	CACGAG	2 cut(s)	85, 714
BbsI	GAAGAC	2 cut(s)	133, 558
Bbv12I	GWGCWC	2 cut(s)	237, 1393
BbvI	GCAGC	8 cut(s)	298, 344, 361, 958, 961, 1326, 1949, 2203
BccI	CCATC	5 cut(s)	299, 464, 716, 1015, 1222
BceAI	ACGGC	1 cut(s)	1649
BcgI	CGANNNNNNTGC	1 cut(s)	2233
BciT130I	CCWGG	3 cut(s)	1319, 1348, 1649
BciVI	GTATCC	2 cut(s)	1315, 2088
BclI	TGATCA	1 cut(s)	448
BcoDI	GTCTC	5 cut(s)	69, 349, 1227, 1573, 1901
BcuI	ACTAGT	1 cut(s)	2183
BfaI	CTAG	3 cut(s)	519, 689, 2184
BfmI	CTRYAG	1 cut(s)	528
BfuAI	ACCTGC	2 cut(s)	151, 289
BfuI	GTATCC	2 cut(s)	1315, 2088
BglII	AGATCT	2 cut(s)	253, 366
BisI	GCNGC	9 cut(s)	287, 333, 375, 972, 975, 1315, 1963, 2155, 2192
BlsI	GCNGC	9 cut(s)	288, 334, 376, 973, 976, 1316, 1964, 2156, 2193
BmcAI	AGTACT	1 cut(s)	1106
Bme1390I	CCNGG	3 cut(s)	1319, 1348, 1649
BmeT110I	CYCGRG	1 cut(s)	999
BmgT120I	GGNCC	2 cut(s)	428, 1350
BmiI	GGNNCC	5 cut(s)	1368, 1514, 1531, 1985, 2046
BmrFI	CCNGG	3 cut(s)	1319, 1348, 1649
BmsI	GCATC	6 cut(s)	694, 795, 986, 1176, 1949, 2172
BpiI	GAAGAC	2 cut(s)	133, 558
BplI	GAGNNNNNCTC	2 cut(s)	353, 385
BpmI	CTGGAG	2 cut(s)	1736, 1826
Bpu14I	TTCGAA	1 cut(s)	155
BpuEI	CTTGAG	1 cut(s)	221
BsaAI	YACGTR	1 cut(s)	1286
BsaHI	GRCGYC	2 cut(s)	1671, 1699
BsaI	GGTCTC	1 cut(s)	349
BsaJI	CCNNGG	5 cut(s)	489, 1162, 1347, 1361, 1987
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 1504, 1534
Bsc4I	CCNNNNNNNGG	1 cut(s)	1539
Bse1I	ACTGG	3 cut(s)	851, 1809, 2048
Bse3DI	GCAATG	3 cut(s)	741, 1451, 2251
BseBI	CCWGG	3 cut(s)	1319, 1348, 1649
BseDI	CCNNGG	5 cut(s)	489, 1162, 1347, 1361, 1987
BseGI	GGATG	9 cut(s)	310, 658, 708, 846, 886, 1455, 1751, 1858, 1900
BseLI	CCNNNNNNNGG	1 cut(s)	1539
BseMI	GCAATG	3 cut(s)	741, 1451, 2251
BseMII	CTCAG	2 cut(s)	525, 1191
BseNI	ACTGG	3 cut(s)	851, 1809, 2048
BseRI	GAGGAG	1 cut(s)	884
BseX3I	CGGCCG	1 cut(s)	1662
BseXI	GCAGC	8 cut(s)	298, 344, 361, 958, 961, 1326, 1949, 2203
BseYI	CCCAGC	1 cut(s)	897
Bsh1236I	CGCG	1 cut(s)	1735
Bsh1285I	CGRYCG	1 cut(s)	1665
BshFI	GGCC	6 cut(s)	430, 482, 626, 1352, 1551, 1664
BshNI	GGYRCC	1 cut(s)	1529
BsiEI	CGRYCG	1 cut(s)	1665
BsiHKAI	GWGCWC	2 cut(s)	237, 1393
BsiHKCI	CYCGRG	1 cut(s)	999
BslI	CCNNNNNNNGG	1 cut(s)	1539
BsmAI	GTCTC	5 cut(s)	69, 349, 1227, 1573, 1901
BsmI	GAATGC	1 cut(s)	1051
BsnI	GGCC	6 cut(s)	430, 482, 626, 1352, 1551, 1664
Bso31I	GGTCTC	1 cut(s)	349
BsoBI	CYCGRG	1 cut(s)	999
Bsp119I	TTCGAA	1 cut(s)	155
Bsp1286I	GDGCHC	2 cut(s)	237, 1393
Bsp1407I	TGTACA	1 cut(s)	291
Bsp143I	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
Bsp19I	CCATGG	2 cut(s)	1162, 1987
BspACI	CCGC	3 cut(s)	5, 1129, 2155
BspANI	GGCC	6 cut(s)	430, 482, 626, 1352, 1551, 1664
BspCNI	CTCAG	2 cut(s)	524, 1192
BspFNI	CGCG	1 cut(s)	1735
BspLI	GGNNCC	5 cut(s)	1368, 1514, 1531, 1985, 2046
BspMAI	CTGCAG	1 cut(s)	532
BspMI	ACCTGC	2 cut(s)	151, 289
BspPI	GGATC	5 cut(s)	403, 985, 998, 1361, 1374
BspQI	GCTCTTC	1 cut(s)	225
BspT104I	TTCGAA	1 cut(s)	155
BspT107I	GGYRCC	1 cut(s)	1529
BspTNI	GGTCTC	1 cut(s)	349
BsrBI	CCGCTC	1 cut(s)	1129
BsrDI	GCAATG	3 cut(s)	741, 1451, 2251
BsrGI	TGTACA	1 cut(s)	291
BsrI	ACTGG	3 cut(s)	851, 1809, 2048
BssECI	CCNNGG	5 cut(s)	489, 1162, 1347, 1361, 1987
BssMI	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
BssNAI	GTATAC	1 cut(s)	2136
BssNI	GRCGYC	2 cut(s)	1671, 1699
BssSI	CACGAG	2 cut(s)	85, 714
BssT1I	CCWWGG	3 cut(s)	1162, 1361, 1987
Bst1107I	GTATAC	1 cut(s)	2136
Bst2BI	CACGAG	2 cut(s)	85, 714
Bst2UI	CCWGG	3 cut(s)	1319, 1348, 1649
Bst4CI	ACNGT	4 cut(s)	205, 1109, 1336, 1486
Bst6I	CTCTTC	4 cut(s)	225, 378, 1459, 1765
BstACI	GRCGYC	2 cut(s)	1671, 1699
BstAUI	TGTACA	1 cut(s)	291
BstBAI	YACGTR	1 cut(s)	1286
BstBI	TTCGAA	1 cut(s)	155
BstC8I	GCNNGC	2 cut(s)	420, 1839
BstDEI	CTNAG	3 cut(s)	511, 1200, 1517
BstDSI	CCRYGG	2 cut(s)	1162, 1987
BstF5I	GGATG	9 cut(s)	310, 658, 708, 846, 886, 1455, 1751, 1858, 1900
BstFNI	CGCG	1 cut(s)	1735
BstKTI	GATC	9 cut(s)	256, 369, 398, 451, 993, 1006, 1369, 1473, 2119
BstMAI	GTCTC	5 cut(s)	69, 349, 1227, 1573, 1901
BstMBI	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
BstMCI	CGRYCG	1 cut(s)	1665
BstMWI	GCNNNNNNNGC	5 cut(s)	220, 295, 329, 1762, 2160
BstNI	CCWGG	3 cut(s)	1319, 1348, 1649
BstSCI	CCNGG	3 cut(s)	1317, 1346, 1647
BstSFI	CTRYAG	1 cut(s)	528
BstUI	CGCG	1 cut(s)	1735
BstV1I	GCAGC	8 cut(s)	298, 344, 361, 958, 961, 1326, 1949, 2203
BstV2I	GAAGAC	2 cut(s)	133, 558
BstX2I	RGATCY	6 cut(s)	253, 366, 395, 990, 1003, 1366
BstXI	CCANNNNNNTGG	1 cut(s)	1228
BstYI	RGATCY	6 cut(s)	253, 366, 395, 990, 1003, 1366
BstZ17I	GTATAC	1 cut(s)	2136
BstZI	CGGCCG	1 cut(s)	1662
BsuI	GTATCC	2 cut(s)	1315, 2088
BsuRI	GGCC	6 cut(s)	430, 482, 626, 1352, 1551, 1664
BtgI	CCRYGG	2 cut(s)	1162, 1987
BtgZI	GCGATG	1 cut(s)	1980
BtsCI	GGATG	9 cut(s)	310, 658, 708, 846, 886, 1455, 1751, 1858, 1900
BtsIMutI	CAGTG	5 cut(s)	142, 841, 1341, 1790, 1881
BveI	ACCTGC	2 cut(s)	151, 289
Cac8I	GCNNGC	2 cut(s)	420, 1839
CaiI	CAGNNNCTG	1 cut(s)	323
Cfr13I	GGNCC	2 cut(s)	428, 1350
CseI	GACGC	2 cut(s)	1133, 1741
Csp6I	GTAC	5 cut(s)	292, 752, 1105, 1283, 1417
CviQI	GTAC	5 cut(s)	292, 752, 1105, 1283, 1417
DdeI	CTNAG	3 cut(s)	511, 1200, 1517
DpnI	GATC	9 cut(s)	255, 368, 397, 450, 992, 1005, 1368, 1472, 2118
DpnII	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
DraI	TTTAAA	1 cut(s)	196
DraIII	CACNNNGTG	1 cut(s)	1916
EaeI	YGGCCR	2 cut(s)	624, 1662
EagI	CGGCCG	1 cut(s)	1662
Eam1104I	CTCTTC	4 cut(s)	225, 378, 1459, 1765
EarI	CTCTTC	4 cut(s)	225, 378, 1459, 1765
Ecl136II	GAGCTC	1 cut(s)	235
EclXI	CGGCCG	1 cut(s)	1662
Eco130I	CCWWGG	3 cut(s)	1162, 1361, 1987
Eco147I	AGGCCT	1 cut(s)	482
Eco24I	GRGCYC	1 cut(s)	237
Eco31I	GGTCTC	1 cut(s)	349
Eco32I	GATATC	2 cut(s)	940, 2215
Eco52I	CGGCCG	1 cut(s)	1662
Eco53kI	GAGCTC	1 cut(s)	235
Eco57I	CTGAAG	7 cut(s)	44, 236, 345, 408, 426, 1404, 1905
Eco88I	CYCGRG	1 cut(s)	999
EcoICRI	GAGCTC	1 cut(s)	235
EcoO109I	RGGNCCY	1 cut(s)	428
EcoRI	GAATTC	1 cut(s)	90
EcoRII	CCWGG	3 cut(s)	1317, 1346, 1647
EcoRV	GATATC	2 cut(s)	940, 2215
EcoT14I	CCWWGG	3 cut(s)	1162, 1361, 1987
EcoT22I	ATGCAT	1 cut(s)	1942
EcoT38I	GRGCYC	1 cut(s)	237
ErhI	CCWWGG	3 cut(s)	1162, 1361, 1987
FalI	AAGNNNNNCTT	4 cut(s)	550, 582, 1377, 1409
FbaI	TGATCA	1 cut(s)	448
FblI	GTMKAC	2 cut(s)	1668, 2135
Fnu4HI	GCNGC	9 cut(s)	287, 333, 375, 972, 975, 1315, 1963, 2155, 2192
FokI	GGATG	9 cut(s)	317, 665, 695, 853, 893, 1462, 1758, 1865, 1907
FriOI	GRGCYC	1 cut(s)	237
Fsp4HI	GCNGC	9 cut(s)	287, 333, 375, 972, 975, 1315, 1963, 2155, 2192
FspBI	CTAG	3 cut(s)	519, 689, 2184
GluI	GCNGC	9 cut(s)	287, 333, 375, 972, 975, 1315, 1963, 2155, 2192
GsaI	CCCAGC	1 cut(s)	901
GsuI	CTGGAG	2 cut(s)	1736, 1826
HaeIII	GGCC	6 cut(s)	430, 482, 626, 1352, 1551, 1664
HgaI	GACGC	2 cut(s)	1133, 1741
Hin1I	GRCGYC	2 cut(s)	1671, 1699
HincII	GTYRAC	2 cut(s)	619, 1669
HindII	GTYRAC	2 cut(s)	619, 1669
HindIII	AAGCTT	2 cut(s)	14, 1676
HinfI	GANTC	9 cut(s)	124, 132, 597, 814, 1186, 1235, 1612, 1637, 1810
HphI	GGTGA	4 cut(s)	256, 1132, 1646, 1901
Hpy166II	GTNNAC	6 cut(s)	619, 848, 925, 1283, 1669, 2136
Hpy8I	GTNNAC	6 cut(s)	619, 848, 925, 1283, 1669, 2136
Hpy99I	CGWCG	8 cut(s)	132, 1670, 1673, 1701, 1704, 1735, 1740, 1800
HpyCH4III	ACNGT	4 cut(s)	205, 1109, 1336, 1486
HpyCH4IV	ACGT	3 cut(s)	1285, 1671, 1699
HpyF10VI	GCNNNNNNNGC	5 cut(s)	220, 295, 329, 1762, 2160
HpyF3I	CTNAG	3 cut(s)	511, 1200, 1517
HpySE526I	ACGT	3 cut(s)	1285, 1671, 1699
Hsp92I	GRCGYC	2 cut(s)	1671, 1699
Ksp22I	TGATCA	1 cut(s)	448
Kzo9I	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	8 cut(s)	211, 220, 283, 774, 1512, 1717, 1846, 2054
Lsp1109I	GCAGC	8 cut(s)	298, 344, 361, 958, 961, 1326, 1949, 2203
LweI	GCATC	6 cut(s)	694, 795, 986, 1176, 1949, 2172
MaeI	CTAG	3 cut(s)	519, 689, 2184
MaeII	ACGT	3 cut(s)	1285, 1671, 1699
MaeIII	GTNAC	3 cut(s)	737, 1634, 1879
MalI	GATC	9 cut(s)	255, 368, 397, 450, 992, 1005, 1368, 1472, 2118
MbiI	CCGCTC	1 cut(s)	1129
MboI	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
MflI	RGATCY	6 cut(s)	253, 366, 395, 990, 1003, 1366
MhlI	GDGCHC	2 cut(s)	237, 1393
MlsI	TGGCCA	1 cut(s)	626
MluCI	AATT	8 cut(s)	90, 191, 405, 548, 930, 1949, 2111, 2218
MluNI	TGGCCA	1 cut(s)	626
MlyI	GAGTC	2 cut(s)	1229, 1631
MmeI	TCCRAC	4 cut(s)	752, 1819, 2032, 2247
Mox20I	TGGCCA	1 cut(s)	626
Mph1103I	ATGCAT	1 cut(s)	1942
MroXI	GAANNNNTTC	2 cut(s)	1377, 1982
MscI	TGGCCA	1 cut(s)	626
MseI	TTAA	8 cut(s)	195, 390, 659, 720, 855, 1064, 2085, 2109
Msp20I	TGGCCA	1 cut(s)	626
MspA1I	CMGCKG	2 cut(s)	289, 446
MspR9I	CCNGG	3 cut(s)	1319, 1348, 1649
Mva1269I	GAATGC	1 cut(s)	1051
MvaI	CCWGG	3 cut(s)	1319, 1348, 1649
MvnI	CGCG	1 cut(s)	1735
MwoI	GCNNNNNNNGC	5 cut(s)	220, 295, 329, 1762, 2160
NcoI	CCATGG	2 cut(s)	1162, 1987
NdeII	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
NlaIV	GGNNCC	5 cut(s)	1368, 1514, 1531, 1985, 2046
NmeAIII	GCCGAG	2 cut(s)	350, 1165
NmuCI	GTSAC	3 cut(s)	737, 1634, 1879
NsiI	ATGCAT	1 cut(s)	1942
NspV	TTCGAA	1 cut(s)	155
PaqCI	CACCTGC	1 cut(s)	289
PceI	AGGCCT	1 cut(s)	482
PciSI	GCTCTTC	1 cut(s)	225
PctI	GAATGC	1 cut(s)	1051
PdmI	GAANNNNTTC	2 cut(s)	1377, 1982
PfeI	GAWTC	7 cut(s)	124, 132, 597, 814, 1186, 1612, 1810
PflMI	CCANNNNNTGG	1 cut(s)	1539
PkrI	GCNGC	9 cut(s)	288, 334, 376, 973, 976, 1316, 1964, 2156, 2193
PleI	GAGTC	2 cut(s)	1229, 1631
PpsI	GAGTC	2 cut(s)	1229, 1631
Ppu21I	YACGTR	1 cut(s)	1286
Psp124BI	GAGCTC	1 cut(s)	237
Psp6I	CCWGG	3 cut(s)	1317, 1346, 1647
PspFI	CCCAGC	1 cut(s)	897
PspGI	CCWGG	3 cut(s)	1317, 1346, 1647
PspN4I	GGNNCC	5 cut(s)	1368, 1514, 1531, 1985, 2046
PspPI	GGNCC	2 cut(s)	428, 1350
PstI	CTGCAG	1 cut(s)	532
PstNI	CAGNNNCTG	1 cut(s)	323
PsuI	RGATCY	6 cut(s)	253, 366, 395, 990, 1003, 1366
PvuII	CAGCTG	2 cut(s)	289, 446
RsaI	GTAC	5 cut(s)	293, 753, 1106, 1284, 1418
RsaNI	GTAC	5 cut(s)	292, 752, 1105, 1283, 1417
SacI	GAGCTC	1 cut(s)	237
SalI	GTCGAC	1 cut(s)	1667
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	8 cut(s)	195, 390, 659, 720, 855, 1064, 2085, 2109
SatI	GCNGC	9 cut(s)	287, 333, 375, 972, 975, 1315, 1963, 2155, 2192
Sau3AI	GATC	9 cut(s)	253, 366, 395, 448, 990, 1003, 1366, 1470, 2116
Sau96I	GGNCC	2 cut(s)	428, 1350
ScaI	AGTACT	1 cut(s)	1106
SchI	GAGTC	2 cut(s)	1229, 1631
ScrFI	CCNGG	3 cut(s)	1319, 1348, 1649
SduI	GDGCHC	2 cut(s)	237, 1393
SfaNI	GCATC	6 cut(s)	694, 795, 986, 1176, 1949, 2172
SfcI	CTRYAG	1 cut(s)	528
SfuI	TTCGAA	1 cut(s)	155
SgrDI	CGTCGACG	1 cut(s)	1667
SmlI	CTYRAG	1 cut(s)	236
SmoI	CTYRAG	1 cut(s)	236
SpeI	ACTAGT	1 cut(s)	2183
Sse9I	AATT	8 cut(s)	90, 191, 405, 548, 930, 1949, 2111, 2218
SseBI	AGGCCT	1 cut(s)	482
SsiI	CCGC	3 cut(s)	5, 1129, 2155
SspMI	CTAG	3 cut(s)	519, 689, 2184
SstI	GAGCTC	1 cut(s)	237
StuI	AGGCCT	1 cut(s)	482
StyD4I	CCNGG	3 cut(s)	1317, 1346, 1647
StyI	CCWWGG	3 cut(s)	1162, 1361, 1987
TaaI	ACNGT	4 cut(s)	205, 1109, 1336, 1486
TaiI	ACGT	3 cut(s)	1288, 1674, 1702
TaqI	TCGA	9 cut(s)	22, 67, 94, 130, 155, 1668, 1696, 1702, 1730
TasI	AATT	8 cut(s)	90, 191, 405, 548, 930, 1949, 2111, 2218
TatI	WGTACW	2 cut(s)	291, 1104
TauI	GCSGC	1 cut(s)	2157
TfiI	GAWTC	7 cut(s)	124, 132, 597, 814, 1186, 1612, 1810
Tru1I	TTAA	8 cut(s)	195, 390, 659, 720, 855, 1064, 2085, 2109
Tru9I	TTAA	8 cut(s)	195, 390, 659, 720, 855, 1064, 2085, 2109
TscAI	CASTG	5 cut(s)	142, 841, 1341, 1790, 1888
TseFI	GTSAC	3 cut(s)	737, 1634, 1879
TseI	GCWGC	8 cut(s)	286, 332, 374, 971, 974, 1314, 1962, 2191
Tsp45I	GTSAC	3 cut(s)	737, 1634, 1879
TspGWI	ACGGA	1 cut(s)	296
TspRI	CASTG	5 cut(s)	142, 841, 1341, 1790, 1888
Van91I	CCANNNNNTGG	1 cut(s)	1539
XapI	RAATTY	5 cut(s)	90, 548, 930, 1949, 2111
XmiI	GTMKAC	2 cut(s)	1668, 2135
XmnI	GAANNNNTTC	2 cut(s)	1377, 1982
XspI	CTAG	3 cut(s)	519, 689, 2184
ZraI	GACGTC	2 cut(s)	1672, 1700
ZrmI	AGTACT	1 cut(s)	1106
Zsp2I	ATGCAT	1 cut(s)	1942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.