Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002467

Physical Location & Seq

Genomic Coordinates Reverse (-)

31871527 .. 31878127

Gene Structure 6601 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00353910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGCGGGTAGAAAGCTTGTTCGAGATTTGATCCTCCACAGAAAATCCCTTCTTCTTCAGTCTCAACAACAGCTAGAGCCCCCAGTCGATTGTGAAGTAAAAGTTTGTGAATTTACCTGTTTGTTTTTCGAACTTCAGACCGGTGTTTCTGATCAGGAGAATCCACAATTTAAAAAGACGGTCAAGGAGCTGAAGGAGCAAGTGGAAGAGCTCAAGGGGGTGAAAGAAGATCTGAAAGTCAGAACGAAGCAGACAACGGAGCAGCTGTACAAGCAGGTGGATGGTGTTTGGACAGAGGCTGAAGAAGCAGCAAAGAAGGTCTCTGCAAATGTAAAAGAGAAGATCTCGGCTGCCACAGAAGAGGCTTCAGGGCCTTCTGGTGCTTCAGCTGATCATGTTGCTGATGAAAAAGATGGAAGTAAGGCCTCGTCCTCAGAAGATAAACACCAGCACTCAGGGTCTAGTGATACTGCAGAAACATTATTTGGAAAATTTAGGTCAAGGGTGTCTTCATCGAATGTTTCCTCTGTCTTTCATAGATTCAAGGAAGCAAAGTTTGTTGACATGGCGAAAAAAGGATATGATATTGTAAAGGATGAGTTAAATGGTAGTCCAAGTAAGAAAAAGCATCTAGGGTTTGACCCTTCTTCCATCCCACGAGTTAAAAGAAGTGCAACAAGTGACATTGCTATTGTACCCACCAAACAATCTCGTTGGAGCAAAAAGTGGGAGGCATTCAGAATGAAGATGCAAGGGAATCCTCTATTCAAGCGCATCAGTGGGATGAGTGAACCAGTTAAAATAAAAAGCGAGGAGATTATGGATGACATGAAGGAACGCTGGGAAACTACTGATAGCCCAATAGTTCACAAAATTCAGGATATCAATGAAGCTATTTTTCAAGAAACAAATGCTGCTGCATCAATCAAGGAGATCCATGCCCGAGATCCATCTTTCTCTTTACCAGATTTTGTGGTAGAAGTTCAGAATGCAGTGAAACCTGTGTTAAATGCTTACATGAAGGTTAGAAATGCCCGATTTGTGGCACTTCACATTTTTATTTTTCTGTCTCATGGTTTAATCTTCATCAGAATGATAGAGTTTCTCACCTTAATTGGAATAACAAAAGCATTGTATCAACAGGGAGATATTGAAACATTGAAGAAGTACTGTGCTAATGAGGTGATTGAGCGGTGTAAAGCCGAGCGTCAGGCTTTTCAAAGCCATGGCATCTTTTTTGATAACAAGTTCCAAACACAGCAAGTCTATTGTGTACGTGATAAAAATGGTGCAATAACAGAAGGCAGCCAGGATACAATCCAAACAGTGTATTATGCCTGGGCCATGCAACCTTGGGATCCCGAAGAACTTCCTGAAGGTGCTCTTTTCCCGATATGGAGAGTGTTTGGTGGTTGGTTTAGTCCCCCCAACTTGGCCTCGTCGGAAGAAGACACTGTAGCTAATTGCTTCTTCAGGCCTTATAGTGAAAGTCCCACTTTTGTTCACCTCCAAATTACTCAAATTTTCGAAACTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005744 GO:0005759 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017111 GO:0019866 GO:0022804 GO:0022857 GO:0022884 GO:0030150 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032991 GO:0033036 GO:0033220 GO:0033365 GO:0034613 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0098796 GO:0098798 GO:0098800 GO:1904680 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tim44

Protein Analysis

512

Amino Acids

58.09

Weight (kDa)

6.5

Isoelectric Point (pI)

48.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tim44	PF04280	416 - 451	2.7e-06	Tim44-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20510 AT2G20510 AT2G20510 AT2G20510 AT2G36070
fragaria_vesca	FvH4_2g21470 FvH4_2g21470 FvH4_4g12040 FvH4_4g12040 FvH4_4g12040 FvH4_4g12040
malus_domestica	MD05G1197100.v1.1 MD09G1008600.v1.1
prunus_persica	Prupe.8G223600_v2.0.a1
pyrus_communis	pycom05g18420 pycom10g15910
rosa_chinensis	RchiOBHm_Chr4g0409381 RchiOBHm_Chr5g0013581 RchiOBHm_Chr6g0288111
rosa_laevigata	RLG00000012438 RLG00000032032
rosa_multiflora	Rmu_co8365065.1_g000001 Rmu_sc0001616.1_g000049 Rmu_sc0001851.1_g000030 Rmu_sc0010766.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062990 Rroxscaffold_5G00353910 Rroxscaffold_7G00180510
rosa_rugosa	Rorug04G0093400 Rorug06G0194200
rosa_samantha	Rh4AG155900 Rh4BG155100 Rh4CG165200 Rh4DG149000 Rh5BG102300 Rh6AG304400 Rh6BG310400 Rh6CG318500 Rh6DG303400
rosa_wichuraiana	Rw4G012760 Rw6G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	265
Acc36I	ACCTGC	1 cut(s)	265
AccBSI	CCGCTC	1 cut(s)	1192
AciI	CCGC	2 cut(s)	5, 1192
AclWI	GGATC	5 cut(s)	25, 928, 941, 1352, 1365
AcsI	RAATTY	4 cut(s)	110, 491, 873, 1521
AcuI	CTGAAG	8 cut(s)	41, 119, 212, 321, 351, 369, 1395, 1456
AfaI	GTAC	4 cut(s)	269, 696, 1169, 1275
AfiI	CCNNNNNNNGG	2 cut(s)	1042, 1432
AgeI	ACCGGT	1 cut(s)	140
AgsI	TTSAA	6 cut(s)	544, 769, 902, 1154, 1162, 1220
AjnI	CCWGG	2 cut(s)	1308, 1337
AjuI	GAANNNNNNNTTGG	2 cut(s)	468, 500
AluBI	AGCT	8 cut(s)	16, 73, 190, 211, 265, 389, 893, 1460
AluI	AGCT	8 cut(s)	16, 73, 190, 211, 265, 389, 893, 1460
Alw21I	GWGCWC	2 cut(s)	213, 1384
Alw26I	GTCTC	3 cut(s)	66, 325, 1074
AlwI	GGATC	5 cut(s)	25, 928, 941, 1352, 1365
AlwNI	CAGNNNCTG	1 cut(s)	299
Ama87I	CYCGRG	1 cut(s)	942
AoxI	GGCC	5 cut(s)	371, 423, 1341, 1434, 1475
ApeKI	GCWGC	6 cut(s)	262, 308, 350, 914, 917, 1305
ApoI	RAATTY	4 cut(s)	110, 491, 873, 1521
AsiGI	ACCGGT	1 cut(s)	140
Asp700I	GAANNNNTTC	1 cut(s)	1368
AspLEI	GCGC	1 cut(s)	774
AspS9I	GGNCC	2 cut(s)	371, 1341
AsuHPI	GGTGA	4 cut(s)	232, 1099, 1195, 1496
AsuII	TTCGAA	2 cut(s)	129, 1527
AvaI	CYCGRG	1 cut(s)	942
BamHI	GGATCC	1 cut(s)	1357
BanII	GRGCYC	2 cut(s)	81, 213
BauI	CACGAG	1 cut(s)	657
BbsI	GAAGAC	2 cut(s)	501, 1455
Bbv12I	GWGCWC	2 cut(s)	213, 1384
BbvI	GCAGC	6 cut(s)	274, 320, 337, 901, 904, 1317
BccI	CCATC	4 cut(s)	275, 407, 659, 958
BciT130I	CCWGG	2 cut(s)	1310, 1339
BciVI	GTATCC	1 cut(s)	1306
BclI	TGATCA	2 cut(s)	151, 391
BcoDI	GTCTC	3 cut(s)	66, 325, 1074
BfaI	CTAG	3 cut(s)	74, 462, 632
BfmI	CTRYAG	2 cut(s)	471, 1455
BfuAI	ACCTGC	1 cut(s)	265
BfuI	GTATCC	1 cut(s)	1306
BglII	AGATCT	2 cut(s)	229, 342
BisI	GCNGC	6 cut(s)	263, 309, 351, 915, 918, 1306
BlsI	GCNGC	6 cut(s)	264, 310, 352, 916, 919, 1307
BmcAI	AGTACT	1 cut(s)	1169
Bme1390I	CCNGG	2 cut(s)	1310, 1339
BmeT110I	CYCGRG	1 cut(s)	942
BmgT120I	GGNCC	2 cut(s)	371, 1341
BmiI	GGNNCC	1 cut(s)	1359
BmrFI	CCNGG	2 cut(s)	1310, 1339
BmrI	ACTGGG	1 cut(s)	77
BmsI	GCATC	5 cut(s)	637, 738, 783, 929, 1239
BmuI	ACTGGG	1 cut(s)	77
BpiI	GAAGAC	2 cut(s)	501, 1455
BplI	GAGNNNNNCTC	2 cut(s)	329, 361
Bpu14I	TTCGAA	2 cut(s)	129, 1527
BpuEI	CTTGAG	1 cut(s)	197
BsaAI	YACGTR	1 cut(s)	1277
BsaI	GGTCTC	1 cut(s)	325
BsaJI	CCNNGG	3 cut(s)	1225, 1338, 1352
BsaWI	WCCGGW	1 cut(s)	140
BsaXI	ACNNNNNCTCC	2 cut(s)	251, 281
Bsc4I	CCNNNNNNNGG	2 cut(s)	1042, 1432
Bse118I	RCCGGY	1 cut(s)	140
Bse1I	ACTGG	2 cut(s)	83, 794
Bse3DI	GCAATG	1 cut(s)	684
BseBI	CCWGG	2 cut(s)	1310, 1339
BseDI	CCNNGG	3 cut(s)	1225, 1338, 1352
BseGI	GGATG	5 cut(s)	286, 601, 651, 789, 829
BseLI	CCNNNNNNNGG	2 cut(s)	1042, 1432
BseMI	GCAATG	1 cut(s)	684
BseMII	CTCAG	2 cut(s)	447, 468
BseNI	ACTGG	2 cut(s)	83, 794
BseRI	GAGGAG	1 cut(s)	827
BseXI	GCAGC	6 cut(s)	274, 320, 337, 901, 904, 1317
BseYI	CCCAGC	1 cut(s)	840
BshFI	GGCC	5 cut(s)	373, 425, 1343, 1436, 1477
BshTI	ACCGGT	1 cut(s)	140
BsiHKAI	GWGCWC	2 cut(s)	213, 1384
BsiHKCI	CYCGRG	1 cut(s)	942
BsiSI	CCGG	1 cut(s)	141
BslFI	GGGAC	2 cut(s)	1407, 1476
BslI	CCNNNNNNNGG	2 cut(s)	1042, 1432
BsmAI	GTCTC	3 cut(s)	66, 325, 1074
BsmFI	GGGAC	2 cut(s)	1407, 1476
BsmI	GAATGC	2 cut(s)	734, 994
BsnI	GGCC	5 cut(s)	373, 425, 1343, 1436, 1477
Bso31I	GGTCTC	1 cut(s)	325
BsoBI	CYCGRG	1 cut(s)	942
Bsp119I	TTCGAA	2 cut(s)	129, 1527
Bsp1286I	GDGCHC	3 cut(s)	81, 213, 1384
Bsp1407I	TGTACA	1 cut(s)	267
Bsp143I	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
Bsp19I	CCATGG	1 cut(s)	1225
BspACI	CCGC	2 cut(s)	5, 1192
BspANI	GGCC	5 cut(s)	373, 425, 1343, 1436, 1477
BspCNI	CTCAG	2 cut(s)	446, 467
BspLI	GGNNCC	1 cut(s)	1359
BspMAI	CTGCAG	1 cut(s)	475
BspMI	ACCTGC	1 cut(s)	265
BspPI	GGATC	5 cut(s)	25, 928, 941, 1352, 1365
BspQI	GCTCTTC	1 cut(s)	201
BspT104I	TTCGAA	2 cut(s)	129, 1527
BspTNI	GGTCTC	1 cut(s)	325
BsrBI	CCGCTC	1 cut(s)	1192
BsrDI	GCAATG	1 cut(s)	684
BsrFI	RCCGGY	1 cut(s)	140
BsrGI	TGTACA	1 cut(s)	267
BsrI	ACTGG	2 cut(s)	83, 794
BssAI	RCCGGY	1 cut(s)	140
BssECI	CCNNGG	3 cut(s)	1225, 1338, 1352
BssMI	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
BssSI	CACGAG	1 cut(s)	657
BssT1I	CCWWGG	2 cut(s)	1225, 1352
Bst2BI	CACGAG	1 cut(s)	657
Bst2UI	CCWGG	2 cut(s)	1310, 1339
Bst4CI	ACNGT	4 cut(s)	181, 1172, 1327, 1456
Bst6I	CTCTTC	2 cut(s)	201, 354
BstAUI	TGTACA	1 cut(s)	267
BstBAI	YACGTR	1 cut(s)	1277
BstBI	TTCGAA	2 cut(s)	129, 1527
BstDEI	CTNAG	2 cut(s)	433, 454
BstDSI	CCRYGG	1 cut(s)	1225
BstF5I	GGATG	5 cut(s)	286, 601, 651, 789, 829
BstHHI	GCGC	1 cut(s)	774
BstKTI	GATC	8 cut(s)	33, 154, 232, 345, 394, 936, 949, 1360
BstMAI	GTCTC	3 cut(s)	66, 325, 1074
BstMBI	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
BstMWI	GCNNNNNNNGC	3 cut(s)	196, 271, 305
BstNI	CCWGG	2 cut(s)	1310, 1339
BstSCI	CCNGG	2 cut(s)	1308, 1337
BstSFI	CTRYAG	2 cut(s)	471, 1455
BstV1I	GCAGC	6 cut(s)	274, 320, 337, 901, 904, 1317
BstV2I	GAAGAC	2 cut(s)	501, 1455
BstX2I	RGATCY	5 cut(s)	229, 342, 933, 946, 1357
BstYI	RGATCY	5 cut(s)	229, 342, 933, 946, 1357
BsuI	GTATCC	1 cut(s)	1306
BsuRI	GGCC	5 cut(s)	373, 425, 1343, 1436, 1477
BtgI	CCRYGG	1 cut(s)	1225
BtsCI	GGATG	5 cut(s)	286, 601, 651, 789, 829
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	4 cut(s)	784, 999, 1332, 1452
BveI	ACCTGC	1 cut(s)	265
CaiI	CAGNNNCTG	1 cut(s)	299
CfoI	GCGC	1 cut(s)	774
Cfr10I	RCCGGY	1 cut(s)	140
Cfr13I	GGNCC	2 cut(s)	371, 1341
CseI	GACGC	1 cut(s)	1196
Csp6I	GTAC	4 cut(s)	268, 695, 1168, 1274
CspAI	ACCGGT	1 cut(s)	140
CviAII	CATG	9 cut(s)	395, 565, 829, 938, 1018, 1073, 1226, 1345, 1536
CviQI	GTAC	4 cut(s)	268, 695, 1168, 1274
DdeI	CTNAG	2 cut(s)	433, 454
DpnI	GATC	8 cut(s)	32, 153, 231, 344, 393, 935, 948, 1359
DpnII	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
DraI	TTTAAA	1 cut(s)	172
Eam1104I	CTCTTC	2 cut(s)	201, 354
EarI	CTCTTC	2 cut(s)	201, 354
Ecl136II	GAGCTC	1 cut(s)	211
Eco130I	CCWWGG	2 cut(s)	1225, 1352
Eco147I	AGGCCT	2 cut(s)	425, 1477
Eco24I	GRGCYC	2 cut(s)	81, 213
Eco31I	GGTCTC	1 cut(s)	325
Eco32I	GATATC	1 cut(s)	883
Eco53kI	GAGCTC	1 cut(s)	211
Eco57I	CTGAAG	8 cut(s)	41, 119, 212, 321, 351, 369, 1395, 1456
Eco88I	CYCGRG	1 cut(s)	942
EcoICRI	GAGCTC	1 cut(s)	211
EcoO109I	RGGNCCY	1 cut(s)	371
EcoRII	CCWGG	2 cut(s)	1308, 1337
EcoRV	GATATC	1 cut(s)	883
EcoT14I	CCWWGG	2 cut(s)	1225, 1352
EcoT38I	GRGCYC	2 cut(s)	81, 213
ErhI	CCWWGG	2 cut(s)	1225, 1352
FaeI	CATG	9 cut(s)	398, 568, 832, 941, 1021, 1076, 1229, 1348, 1539
FalI	AAGNNNNNCTT	6 cut(s)	493, 525, 1368, 1400, 1480, 1512
FaqI	GGGAC	2 cut(s)	1407, 1476
FatI	CATG	9 cut(s)	394, 564, 828, 937, 1017, 1072, 1225, 1344, 1535
FbaI	TGATCA	2 cut(s)	151, 391
Fnu4HI	GCNGC	6 cut(s)	263, 309, 351, 915, 918, 1306
FokI	GGATG	5 cut(s)	293, 608, 638, 796, 836
FriOI	GRGCYC	2 cut(s)	81, 213
Fsp4HI	GCNGC	6 cut(s)	263, 309, 351, 915, 918, 1306
FspBI	CTAG	3 cut(s)	74, 462, 632
GlaI	GCGC	1 cut(s)	773
GluI	GCNGC	6 cut(s)	263, 309, 351, 915, 918, 1306
GsaI	CCCAGC	1 cut(s)	844
HaeIII	GGCC	5 cut(s)	373, 425, 1343, 1436, 1477
HapII	CCGG	1 cut(s)	141
HgaI	GACGC	1 cut(s)	1196
HhaI	GCGC	1 cut(s)	774
Hin1II	CATG	9 cut(s)	398, 568, 832, 941, 1021, 1076, 1229, 1348, 1539
Hin6I	GCGC	1 cut(s)	772
HinP1I	GCGC	1 cut(s)	772
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HindIII	AAGCTT	1 cut(s)	14
HinfI	GANTC	3 cut(s)	160, 540, 757
HpaII	CCGG	1 cut(s)	141
HphI	GGTGA	4 cut(s)	232, 1099, 1195, 1496
Hpy166II	GTNNAC	5 cut(s)	562, 791, 868, 1274, 1504
Hpy188I	TCNGA	9 cut(s)	138, 151, 234, 242, 436, 740, 987, 1091, 1444
Hpy188III	TCNNGA	7 cut(s)	23, 155, 878, 902, 1361, 1373, 1390
Hpy8I	GTNNAC	5 cut(s)	562, 791, 868, 1274, 1504
Hpy99I	CGWCG	1 cut(s)	1444
HpyAV	CCTTC	9 cut(s)	59, 187, 310, 384, 654, 826, 1015, 1295, 1370
HpyCH4III	ACNGT	4 cut(s)	181, 1172, 1327, 1456
HpyCH4IV	ACGT	1 cut(s)	1276
HpyCH4V	TGCA	9 cut(s)	326, 473, 674, 751, 920, 992, 1292, 1348, 1535
HpyF10VI	GCNNNNNNNGC	3 cut(s)	196, 271, 305
HpyF3I	CTNAG	2 cut(s)	433, 454
HpySE526I	ACGT	1 cut(s)	1276
Hsp92II	CATG	9 cut(s)	398, 568, 832, 941, 1021, 1076, 1229, 1348, 1539
HspAI	GCGC	1 cut(s)	772
Ksp22I	TGATCA	2 cut(s)	151, 391
Kzo9I	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
LguI	GCTCTTC	1 cut(s)	201
LmnI	GCTCC	4 cut(s)	187, 196, 259, 717
Lsp1109I	GCAGC	6 cut(s)	274, 320, 337, 901, 904, 1317
LweI	GCATC	5 cut(s)	637, 738, 783, 929, 1239
MaeI	CTAG	3 cut(s)	74, 462, 632
MaeII	ACGT	1 cut(s)	1276
MaeIII	GTNAC	1 cut(s)	680
MalI	GATC	8 cut(s)	32, 153, 231, 344, 393, 935, 948, 1359
MbiI	CCGCTC	1 cut(s)	1192
MboI	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
MflI	RGATCY	5 cut(s)	229, 342, 933, 946, 1357
MhlI	GDGCHC	3 cut(s)	81, 213, 1384
MluCI	AATT	8 cut(s)	110, 167, 491, 873, 1113, 1462, 1512, 1521
MmeI	TCCRAC	2 cut(s)	695, 1422
MroXI	GAANNNNTTC	1 cut(s)	1368
MseI	TTAA	7 cut(s)	171, 602, 663, 798, 1007, 1079, 1112
MslI	CAYNNNNRTG	1 cut(s)	1091
MspA1I	CMGCKG	2 cut(s)	265, 389
MspI	CCGG	1 cut(s)	141
MspR9I	CCNGG	2 cut(s)	1310, 1339
Mva1269I	GAATGC	2 cut(s)	734, 994
MvaI	CCWGG	2 cut(s)	1310, 1339
MwoI	GCNNNNNNNGC	3 cut(s)	196, 271, 305
NcoI	CCATGG	1 cut(s)	1225
NdeII	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
NlaIII	CATG	9 cut(s)	398, 568, 832, 941, 1021, 1076, 1229, 1348, 1539
NlaIV	GGNNCC	1 cut(s)	1359
NmeAIII	GCCGAG	2 cut(s)	326, 1228
NmuCI	GTSAC	1 cut(s)	680
NspV	TTCGAA	2 cut(s)	129, 1527
PaqCI	CACCTGC	1 cut(s)	265
PceI	AGGCCT	2 cut(s)	425, 1477
PciSI	GCTCTTC	1 cut(s)	201
PctI	GAATGC	2 cut(s)	734, 994
PdmI	GAANNNNTTC	1 cut(s)	1368
PfeI	GAWTC	3 cut(s)	160, 540, 757
PinAI	ACCGGT	1 cut(s)	140
PkrI	GCNGC	6 cut(s)	264, 310, 352, 916, 919, 1307
Ppu21I	YACGTR	1 cut(s)	1277
Psp124BI	GAGCTC	1 cut(s)	213
Psp6I	CCWGG	2 cut(s)	1308, 1337
PspFI	CCCAGC	1 cut(s)	840
PspGI	CCWGG	2 cut(s)	1308, 1337
PspN4I	GGNNCC	1 cut(s)	1359
PspPI	GGNCC	2 cut(s)	371, 1341
PstI	CTGCAG	1 cut(s)	475
PstNI	CAGNNNCTG	1 cut(s)	299
PsuI	RGATCY	5 cut(s)	229, 342, 933, 946, 1357
PvuII	CAGCTG	2 cut(s)	265, 389
RsaI	GTAC	4 cut(s)	269, 696, 1169, 1275
RsaNI	GTAC	4 cut(s)	268, 695, 1168, 1274
RseI	CAYNNNNRTG	1 cut(s)	1091
SacI	GAGCTC	1 cut(s)	213
SapI	GCTCTTC	1 cut(s)	201
SaqAI	TTAA	7 cut(s)	171, 602, 663, 798, 1007, 1079, 1112
SatI	GCNGC	6 cut(s)	263, 309, 351, 915, 918, 1306
Sau3AI	GATC	8 cut(s)	30, 151, 229, 342, 391, 933, 946, 1357
Sau96I	GGNCC	2 cut(s)	371, 1341
ScaI	AGTACT	1 cut(s)	1169
ScrFI	CCNGG	2 cut(s)	1310, 1339
SduI	GDGCHC	3 cut(s)	81, 213, 1384
SfaNI	GCATC	5 cut(s)	637, 738, 783, 929, 1239
SfcI	CTRYAG	2 cut(s)	471, 1455
SfuI	TTCGAA	2 cut(s)	129, 1527
SmiMI	CAYNNNNRTG	1 cut(s)	1091
SmlI	CTYRAG	1 cut(s)	212
SmoI	CTYRAG	1 cut(s)	212
Sse9I	AATT	8 cut(s)	110, 167, 491, 873, 1113, 1462, 1512, 1521
SseBI	AGGCCT	2 cut(s)	425, 1477
SsiI	CCGC	2 cut(s)	5, 1192
SspMI	CTAG	3 cut(s)	74, 462, 632
SstI	GAGCTC	1 cut(s)	213
StuI	AGGCCT	2 cut(s)	425, 1477
StyD4I	CCNGG	2 cut(s)	1308, 1337
StyI	CCWWGG	2 cut(s)	1225, 1352
TaaI	ACNGT	4 cut(s)	181, 1172, 1327, 1456
TaiI	ACGT	1 cut(s)	1279
TaqI	TCGA	5 cut(s)	22, 87, 129, 515, 1527
TasI	AATT	8 cut(s)	110, 167, 491, 873, 1113, 1462, 1512, 1521
TatI	WGTACW	2 cut(s)	267, 1167
TfiI	GAWTC	3 cut(s)	160, 540, 757
Tru1I	TTAA	7 cut(s)	171, 602, 663, 798, 1007, 1079, 1112
Tru9I	TTAA	7 cut(s)	171, 602, 663, 798, 1007, 1079, 1112
TscAI	CASTG	4 cut(s)	784, 999, 1332, 1459
TseFI	GTSAC	1 cut(s)	680
TseI	GCWGC	6 cut(s)	262, 308, 350, 914, 917, 1305
Tsp45I	GTSAC	1 cut(s)	680
TspDTI	ATGAA	8 cut(s)	420, 501, 524, 758, 845, 903, 1034, 1075
TspGWI	ACGGA	1 cut(s)	272
TspRI	CASTG	4 cut(s)	784, 999, 1332, 1459
XapI	RAATTY	4 cut(s)	110, 491, 873, 1521
XmnI	GAANNNNTTC	1 cut(s)	1368
XspI	CTAG	3 cut(s)	74, 462, 632
ZrmI	AGTACT	1 cut(s)	1169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.