Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002467

Physical Location & Seq

Genomic Coordinates Reverse (-)

27912006 .. 27927781

Gene Structure 15776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG155100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGCGGGTAGAAAGCTTGTTCGAGATTTGTTCCTCCACAGACAATCCCTTCTTCTTCAGTCTCGACAACAGGTTTCAGGCACGAGAATTCGATTGCTTTCGGAAAATGGGTATTGGGGGAATCGTCGATTCAGTGTCTTCAATGAGTTTTCGAAGCAGGTCAAGGAGGAAACCAATAAGAATCCACAATTTAAAAAGACGGTCAAGGAGCTGAAGGAGCAAGTAGAAGAGCTCAAGGGGGTGAAAGAAGATCTGAAAGTCAGAACGAAGCAGACAACGGAGCAGCTGTACAAGCAGGTGGATGGTGTTTGGACAGAGGCTGAAGAAGCAGCAAAGAAGGTCTCTGCAAATGTAAAAGAGAAGATCTCGGCTGCCACAGAAGAGGTTAAAGAATCTTTTGGAATTGGGAAAGAGCAAGCTTCAGGGCCTTTTGGTGCTTCAGCTGATCATGTTGCTGATGAAAAAGATGGAAGTAAGGCCTCGTCCTCGGAAGATAAACACCAGCACTCAGGGTCTAGTGATACTGCTGAAACATTATTTGGAAAATTTAGGTCAAAGGTGTCTTCATCGAATGTTTCCTCTGTCTTTCATAGATTCAAGGAAGCAAAGTTTGTTGACATGGCCAAAAAAGGATATGACATTGTAAAGGATGAGTTAAATGGTAGTCCAAGTAAGAAAAAGCATCTAGGGTTTGACCCTTCTTCCATCCCAAGAGTTGAAAGAAGTGCAACAAGCGACATTGCTATTGCACCCACCAAACAATCTCGTTGGAGCAAAAAGTGGGAGGCTTTCAGAATGAATATGCAAGGGAATCCTCTATTCAAGCGTATCAGTGGGATAAGTGAACCTGTTAAAATAAAAAGCGAGGAGATTATGGATGACATGAAAGAACGCTGGGAAACTACTGATAGCCCAATAGTTCACAAAATTCAGGATATCAATGAAGCTATTTTTCAAGAAACAAATGCTGCTGCATCAATCAAGGAGATCCATGCTCGAGATCCATCTTTCTCTTTACCAGATTTTGTGGTAGAAGTTCAGAATGCAGTCAAACCTGTGTTAAATGCTTACATGAAGGGAGATATTGAAACATTGAAGAAGTACTGTGCTAATGAGGTGATTGAGCGGTGTAGAGCCGAGCGTCAGGCTTTTCAAAGCCATGGCATCTTTTTTGATAACAAGATTCTACATATATCTGAGGTGGAAGTAAGAGAAACCAAACTGATGGGAGACTCTCCCATAATCATTGTAGGGTTCCAAACACAGCAAGTCTATTGTGTACGTGATAAAAATGGTGCAATAACAGAAGGCAGCCAGGATACAATCCAAACCGTGTATTACGCCTGGGCCATGCAACCTTGGGATCCCGAAGAACTTCCTGAAGGTGCTCTTTTCCCGATATGGAGAGCCAATGAGAGAGCCTATGAAGTAGCCAGCATCTCTACAAGAATGACAGAGCTGGCATGCATGGATCTAGTTCGCAAACCATCCTACAAGGTGACAAGATCAATTGGCTCTGCGTCACCAGCCCAGAACGACTCGCCTCTCCTTTCTTTTCCTCGCTCTGCCACTCATGTCTACCAGTTTGAGCTGTACAAGACAAATGAGGGCCGAAAGACACGGCGGTGCGACCCAATTGAACTTTCATTTTCAGGCAGCTTCATGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005744 GO:0005759 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017111 GO:0019866 GO:0022804 GO:0022857 GO:0022884 GO:0030150 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032991 GO:0033036 GO:0033220 GO:0033365 GO:0034613 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0098796 GO:0098798 GO:0098800 GO:1904680 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tim44

Protein Analysis

556

Amino Acids

62.97

Weight (kDa)

8.62

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tim44	PF04280	324 - 452	5.6e-38	Tim44-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20510 AT2G20510 AT2G20510 AT2G20510 AT2G36070
fragaria_vesca	FvH4_2g21470 FvH4_2g21470 FvH4_4g12040 FvH4_4g12040 FvH4_4g12040 FvH4_4g12040
malus_domestica	MD05G1197100.v1.1 MD09G1008600.v1.1
prunus_persica	Prupe.8G223600_v2.0.a1
pyrus_communis	pycom05g18420 pycom10g15910
rosa_chinensis	RchiOBHm_Chr4g0409381 RchiOBHm_Chr5g0013581 RchiOBHm_Chr6g0288111
rosa_laevigata	RLG00000012438 RLG00000032032
rosa_multiflora	Rmu_co8365065.1_g000001 Rmu_sc0001616.1_g000049 Rmu_sc0001851.1_g000030 Rmu_sc0010766.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062990 Rroxscaffold_5G00353910 Rroxscaffold_7G00180510
rosa_rugosa	Rorug04G0093400 Rorug06G0194200
rosa_samantha	Rh4AG155900 Rh4BG155100 Rh4CG165200 Rh4DG149000 Rh5BG102300 Rh6AG304400 Rh6BG310400 Rh6CG318500 Rh6DG303400
rosa_wichuraiana	Rw4G012760 Rw6G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	286
Acc36I	ACCTGC	2 cut(s)	148, 286
AccBSI	CCGCTC	1 cut(s)	1126
AccI	GTMKAC	1 cut(s)	1578
AciI	CCGC	3 cut(s)	5, 1126, 1624
AclWI	GGATC	5 cut(s)	982, 995, 1358, 1371, 1479
AcoI	YGGCCR	1 cut(s)	621
AcsI	RAATTY	3 cut(s)	87, 545, 927
AcuI	CTGAAG	6 cut(s)	41, 233, 342, 405, 423, 1401
AfaI	GTAC	4 cut(s)	290, 1103, 1281, 1595
AgsI	TTSAA	9 cut(s)	142, 598, 719, 823, 956, 1088, 1096, 1154, 1640
AjnI	CCWGG	2 cut(s)	1314, 1343
AjuI	GAANNNNNNNTTGG	4 cut(s)	522, 554, 1627, 1659
AleI	CACNNNNGTG	1 cut(s)	1624
Alw21I	GWGCWC	2 cut(s)	234, 1390
Alw26I	GTCTC	3 cut(s)	66, 346, 1224
AlwI	GGATC	5 cut(s)	982, 995, 1358, 1371, 1479
AlwNI	CAGNNNCTG	1 cut(s)	320
Ama87I	CYCGRG	1 cut(s)	996
AoxI	GGCC	5 cut(s)	425, 477, 621, 1347, 1609
ApeKI	GCWGC	7 cut(s)	283, 329, 371, 968, 971, 1311, 1656
ApoI	RAATTY	3 cut(s)	87, 545, 927
Asp700I	GAANNNNTTC	1 cut(s)	1374
AspS9I	GGNCC	3 cut(s)	425, 1347, 1609
AsuHPI	GGTGA	4 cut(s)	253, 1129, 1510, 1515
AsuII	TTCGAA	1 cut(s)	152
AvaI	CYCGRG	1 cut(s)	996
BalI	TGGCCA	1 cut(s)	623
BamHI	GGATCC	1 cut(s)	1363
BanII	GRGCYC	1 cut(s)	234
BauI	CACGAG	1 cut(s)	82
BbsI	GAAGAC	2 cut(s)	130, 555
Bbv12I	GWGCWC	2 cut(s)	234, 1390
BbvI	GCAGC	6 cut(s)	295, 341, 358, 955, 958, 1323
BccI	CCATC	6 cut(s)	296, 461, 713, 1012, 1219, 1495
BceAI	ACGGC	1 cut(s)	1637
BciT130I	CCWGG	2 cut(s)	1316, 1345
BciVI	GTATCC	1 cut(s)	1312
BclI	TGATCA	1 cut(s)	445
BcoDI	GTCTC	3 cut(s)	66, 346, 1224
BfaI	CTAG	3 cut(s)	516, 686, 1475
BfuAI	ACCTGC	2 cut(s)	148, 286
BfuI	GTATCC	1 cut(s)	1312
BglII	AGATCT	2 cut(s)	250, 363
BisI	GCNGC	7 cut(s)	284, 330, 372, 969, 972, 1312, 1657
BlsI	GCNGC	7 cut(s)	285, 331, 373, 970, 973, 1313, 1658
BmcAI	AGTACT	1 cut(s)	1103
Bme1390I	CCNGG	2 cut(s)	1316, 1345
BmeT110I	CYCGRG	1 cut(s)	996
BmgT120I	GGNCC	3 cut(s)	425, 1347, 1609
BmiI	GGNNCC	2 cut(s)	1256, 1365
BmrFI	CCNGG	2 cut(s)	1316, 1345
BmsI	GCATC	4 cut(s)	691, 983, 1173, 1446
BpiI	GAAGAC	2 cut(s)	130, 555
BplI	GAGNNNNNCTC	2 cut(s)	350, 382
Bpu14I	TTCGAA	1 cut(s)	152
BpuEI	CTTGAG	1 cut(s)	218
BsaAI	YACGTR	1 cut(s)	1283
BsaI	GGTCTC	1 cut(s)	346
BsaJI	CCNNGG	4 cut(s)	486, 1159, 1344, 1358
BsaXI	ACNNNNNCTCC	2 cut(s)	272, 302
Bse1I	ACTGG	1 cut(s)	1582
Bse3DI	GCAATG	1 cut(s)	738
BseBI	CCWGG	2 cut(s)	1316, 1345
BseDI	CCNNGG	4 cut(s)	486, 1159, 1344, 1358
BseGI	GGATG	5 cut(s)	307, 655, 705, 883, 1487
BseMI	GCAATG	1 cut(s)	738
BseMII	CTCAG	2 cut(s)	522, 1188
BseNI	ACTGG	1 cut(s)	1582
BseRI	GAGGAG	1 cut(s)	881
BseXI	GCAGC	6 cut(s)	295, 341, 358, 955, 958, 1323
BseYI	CCCAGC	1 cut(s)	894
BshFI	GGCC	5 cut(s)	427, 479, 623, 1349, 1611
BsiHKAI	GWGCWC	2 cut(s)	234, 1390
BsiHKCI	CYCGRG	1 cut(s)	996
BsmAI	GTCTC	3 cut(s)	66, 346, 1224
BsmI	GAATGC	1 cut(s)	1048
BsnI	GGCC	5 cut(s)	427, 479, 623, 1349, 1611
Bso31I	GGTCTC	1 cut(s)	346
BsoBI	CYCGRG	1 cut(s)	996
Bsp119I	TTCGAA	1 cut(s)	152
Bsp1286I	GDGCHC	2 cut(s)	234, 1390
Bsp1407I	TGTACA	2 cut(s)	288, 1593
Bsp143I	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
Bsp19I	CCATGG	1 cut(s)	1159
BspACI	CCGC	3 cut(s)	5, 1126, 1624
BspANI	GGCC	5 cut(s)	427, 479, 623, 1349, 1611
BspCNI	CTCAG	2 cut(s)	521, 1189
BspLI	GGNNCC	2 cut(s)	1256, 1365
BspMI	ACCTGC	2 cut(s)	148, 286
BspPI	GGATC	5 cut(s)	982, 995, 1358, 1371, 1479
BspQI	GCTCTTC	1 cut(s)	222
BspT104I	TTCGAA	1 cut(s)	152
BspTNI	GGTCTC	1 cut(s)	346
BsrBI	CCGCTC	1 cut(s)	1126
BsrDI	GCAATG	1 cut(s)	738
BsrGI	TGTACA	2 cut(s)	288, 1593
BsrI	ACTGG	1 cut(s)	1582
BssECI	CCNNGG	4 cut(s)	486, 1159, 1344, 1358
BssMI	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
BssSI	CACGAG	1 cut(s)	82
BssT1I	CCWWGG	2 cut(s)	1159, 1358
Bst2BI	CACGAG	1 cut(s)	82
Bst2UI	CCWGG	2 cut(s)	1316, 1345
Bst4CI	ACNGT	3 cut(s)	202, 1106, 1333
Bst6I	CTCTTC	2 cut(s)	222, 375
BstAUI	TGTACA	2 cut(s)	288, 1593
BstBAI	YACGTR	1 cut(s)	1283
BstBI	TTCGAA	1 cut(s)	152
BstC8I	GCNNGC	4 cut(s)	417, 1435, 1461, 1465
BstDEI	CTNAG	2 cut(s)	508, 1197
BstDSI	CCRYGG	1 cut(s)	1159
BstF5I	GGATG	5 cut(s)	307, 655, 705, 883, 1487
BstKTI	GATC	8 cut(s)	253, 366, 448, 990, 1003, 1366, 1474, 1508
BstMAI	GTCTC	3 cut(s)	66, 346, 1224
BstMBI	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
BstMWI	GCNNNNNNNGC	4 cut(s)	217, 292, 326, 1526
BstNI	CCWGG	2 cut(s)	1316, 1345
BstNSI	RCATGY	1 cut(s)	1467
BstSCI	CCNGG	2 cut(s)	1314, 1343
BstV1I	GCAGC	6 cut(s)	295, 341, 358, 955, 958, 1323
BstV2I	GAAGAC	2 cut(s)	130, 555
BstX2I	RGATCY	6 cut(s)	250, 363, 987, 1000, 1363, 1471
BstXI	CCANNNNNNTGG	1 cut(s)	1225
BstYI	RGATCY	6 cut(s)	250, 363, 987, 1000, 1363, 1471
BsuI	GTATCC	1 cut(s)	1312
BsuRI	GGCC	5 cut(s)	427, 479, 623, 1349, 1611
BtgI	CCRYGG	1 cut(s)	1159
BtsCI	GGATG	5 cut(s)	307, 655, 705, 883, 1487
BtsIMutI	CAGTG	2 cut(s)	139, 838
BveI	ACCTGC	2 cut(s)	148, 286
Cac8I	GCNNGC	4 cut(s)	417, 1435, 1461, 1465
CaiI	CAGNNNCTG	1 cut(s)	320
Cfr13I	GGNCC	3 cut(s)	425, 1347, 1609
CseI	GACGC	2 cut(s)	1130, 1509
Csp6I	GTAC	4 cut(s)	289, 1102, 1280, 1594
CviQI	GTAC	4 cut(s)	289, 1102, 1280, 1594
DdeI	CTNAG	2 cut(s)	508, 1197
DpnI	GATC	8 cut(s)	252, 365, 447, 989, 1002, 1365, 1473, 1507
DpnII	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
DraI	TTTAAA	1 cut(s)	193
EaeI	YGGCCR	1 cut(s)	621
Eam1104I	CTCTTC	2 cut(s)	222, 375
EarI	CTCTTC	2 cut(s)	222, 375
Ecl136II	GAGCTC	1 cut(s)	232
Eco130I	CCWWGG	2 cut(s)	1159, 1358
Eco147I	AGGCCT	1 cut(s)	479
Eco24I	GRGCYC	1 cut(s)	234
Eco31I	GGTCTC	1 cut(s)	346
Eco32I	GATATC	1 cut(s)	937
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	6 cut(s)	41, 233, 342, 405, 423, 1401
Eco88I	CYCGRG	1 cut(s)	996
EcoICRI	GAGCTC	1 cut(s)	232
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRI	GAATTC	1 cut(s)	87
EcoRII	CCWGG	2 cut(s)	1314, 1343
EcoRV	GATATC	1 cut(s)	937
EcoT14I	CCWWGG	2 cut(s)	1159, 1358
EcoT22I	ATGCAT	1 cut(s)	1469
EcoT38I	GRGCYC	1 cut(s)	234
ErhI	CCWWGG	2 cut(s)	1159, 1358
FalI	AAGNNNNNCTT	2 cut(s)	1374, 1406
FbaI	TGATCA	1 cut(s)	445
FblI	GTMKAC	1 cut(s)	1578
Fnu4HI	GCNGC	7 cut(s)	284, 330, 372, 969, 972, 1312, 1657
FokI	GGATG	5 cut(s)	314, 662, 692, 890, 1474
FriOI	GRGCYC	1 cut(s)	234
Fsp4HI	GCNGC	7 cut(s)	284, 330, 372, 969, 972, 1312, 1657
FspBI	CTAG	3 cut(s)	516, 686, 1475
GluI	GCNGC	7 cut(s)	284, 330, 372, 969, 972, 1312, 1657
GsaI	CCCAGC	1 cut(s)	898
HaeIII	GGCC	5 cut(s)	427, 479, 623, 1349, 1611
HgaI	GACGC	2 cut(s)	1130, 1509
HincII	GTYRAC	1 cut(s)	616
HindII	GTYRAC	1 cut(s)	616
HindIII	AAGCTT	2 cut(s)	14, 417
HinfI	GANTC	9 cut(s)	121, 129, 181, 392, 594, 811, 1183, 1232, 1538
HphI	GGTGA	4 cut(s)	253, 1129, 1510, 1515
Hpy166II	GTNNAC	5 cut(s)	616, 845, 922, 1280, 1579
Hpy188I	TCNGA	7 cut(s)	103, 255, 263, 490, 794, 1041, 1198
Hpy188III	TCNNGA	8 cut(s)	23, 63, 932, 956, 998, 1367, 1379, 1396
Hpy8I	GTNNAC	5 cut(s)	616, 845, 922, 1280, 1579
Hpy99I	CGWCG	1 cut(s)	129
HpyAV	CCTTC	7 cut(s)	59, 208, 331, 708, 1069, 1301, 1376
HpyCH4III	ACNGT	3 cut(s)	202, 1106, 1333
HpyCH4IV	ACGT	1 cut(s)	1282
HpyCH4V	TGCA	9 cut(s)	347, 728, 749, 805, 974, 1046, 1298, 1354, 1467
HpyF10VI	GCNNNNNNNGC	4 cut(s)	217, 292, 326, 1526
HpyF3I	CTNAG	2 cut(s)	508, 1197
HpySE526I	ACGT	1 cut(s)	1282
Ksp22I	TGATCA	1 cut(s)	445
Kzo9I	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
LguI	GCTCTTC	1 cut(s)	222
LmnI	GCTCC	4 cut(s)	208, 217, 280, 771
Lsp1109I	GCAGC	6 cut(s)	295, 341, 358, 955, 958, 1323
LweI	GCATC	4 cut(s)	691, 983, 1173, 1446
MaeI	CTAG	3 cut(s)	516, 686, 1475
MaeII	ACGT	1 cut(s)	1282
MaeIII	GTNAC	2 cut(s)	1498, 1521
MalI	GATC	8 cut(s)	252, 365, 447, 989, 1002, 1365, 1473, 1507
MbiI	CCGCTC	1 cut(s)	1126
MboI	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
MfeI	CAATTG	2 cut(s)	1509, 1635
MflI	RGATCY	6 cut(s)	250, 363, 987, 1000, 1363, 1471
MhlI	GDGCHC	2 cut(s)	234, 1390
MlsI	TGGCCA	1 cut(s)	623
MluCI	AATT	7 cut(s)	87, 188, 402, 545, 927, 1509, 1635
MluNI	TGGCCA	1 cut(s)	623
MlyI	GAGTC	2 cut(s)	1226, 1532
MmeI	TCCRAC	1 cut(s)	749
Mox20I	TGGCCA	1 cut(s)	623
Mph1103I	ATGCAT	1 cut(s)	1469
MroXI	GAANNNNTTC	1 cut(s)	1374
MscI	TGGCCA	1 cut(s)	623
MseI	TTAA	5 cut(s)	192, 387, 656, 852, 1061
MslI	CAYNNNNRTG	1 cut(s)	1624
Msp20I	TGGCCA	1 cut(s)	623
MspA1I	CMGCKG	2 cut(s)	286, 443
MspR9I	CCNGG	2 cut(s)	1316, 1345
MunI	CAATTG	2 cut(s)	1509, 1635
Mva1269I	GAATGC	1 cut(s)	1048
MvaI	CCWGG	2 cut(s)	1316, 1345
MwoI	GCNNNNNNNGC	4 cut(s)	217, 292, 326, 1526
NcoI	CCATGG	1 cut(s)	1159
NdeII	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
NlaIV	GGNNCC	2 cut(s)	1256, 1365
NmeAIII	GCCGAG	2 cut(s)	347, 1162
NmuCI	GTSAC	2 cut(s)	1498, 1521
NsiI	ATGCAT	1 cut(s)	1469
NspI	RCATGY	1 cut(s)	1467
NspV	TTCGAA	1 cut(s)	152
OliI	CACNNNNGTG	1 cut(s)	1624
PaeI	GCATGC	1 cut(s)	1467
PaeR7I	CTCGAG	1 cut(s)	996
PaqCI	CACCTGC	1 cut(s)	286
PceI	AGGCCT	1 cut(s)	479
PciSI	GCTCTTC	1 cut(s)	222
PctI	GAATGC	1 cut(s)	1048
PdmI	GAANNNNTTC	1 cut(s)	1374
PfeI	GAWTC	7 cut(s)	121, 129, 181, 392, 594, 811, 1183
PkrI	GCNGC	7 cut(s)	285, 331, 373, 970, 973, 1313, 1658
PleI	GAGTC	2 cut(s)	1226, 1532
PpsI	GAGTC	2 cut(s)	1226, 1532
Ppu21I	YACGTR	1 cut(s)	1283
Psp124BI	GAGCTC	1 cut(s)	234
Psp6I	CCWGG	2 cut(s)	1314, 1343
PspFI	CCCAGC	1 cut(s)	894
PspGI	CCWGG	2 cut(s)	1314, 1343
PspN4I	GGNNCC	2 cut(s)	1256, 1365
PspPI	GGNCC	3 cut(s)	425, 1347, 1609
PstNI	CAGNNNCTG	1 cut(s)	320
PsuI	RGATCY	6 cut(s)	250, 363, 987, 1000, 1363, 1471
PvuII	CAGCTG	2 cut(s)	286, 443
RsaI	GTAC	4 cut(s)	290, 1103, 1281, 1595
RsaNI	GTAC	4 cut(s)	289, 1102, 1280, 1594
RseI	CAYNNNNRTG	1 cut(s)	1624
SacI	GAGCTC	1 cut(s)	234
SapI	GCTCTTC	1 cut(s)	222
SaqAI	TTAA	5 cut(s)	192, 387, 656, 852, 1061
SatI	GCNGC	7 cut(s)	284, 330, 372, 969, 972, 1312, 1657
Sau3AI	GATC	8 cut(s)	250, 363, 445, 987, 1000, 1363, 1471, 1505
Sau96I	GGNCC	3 cut(s)	425, 1347, 1609
ScaI	AGTACT	1 cut(s)	1103
SchI	GAGTC	2 cut(s)	1226, 1532
ScrFI	CCNGG	2 cut(s)	1316, 1345
SduI	GDGCHC	2 cut(s)	234, 1390
SfaNI	GCATC	4 cut(s)	691, 983, 1173, 1446
Sfr274I	CTCGAG	1 cut(s)	996
SfuI	TTCGAA	1 cut(s)	152
SlaI	CTCGAG	1 cut(s)	996
SmiMI	CAYNNNNRTG	1 cut(s)	1624
SmlI	CTYRAG	2 cut(s)	233, 996
SmoI	CTYRAG	2 cut(s)	233, 996
SphI	GCATGC	1 cut(s)	1467
Sse9I	AATT	7 cut(s)	87, 188, 402, 545, 927, 1509, 1635
SseBI	AGGCCT	1 cut(s)	479
SsiI	CCGC	3 cut(s)	5, 1126, 1624
SspMI	CTAG	3 cut(s)	516, 686, 1475
SstI	GAGCTC	1 cut(s)	234
StuI	AGGCCT	1 cut(s)	479
StyD4I	CCNGG	2 cut(s)	1314, 1343
StyI	CCWWGG	2 cut(s)	1159, 1358
TaaI	ACNGT	3 cut(s)	202, 1106, 1333
TaiI	ACGT	1 cut(s)	1285
TaqI	TCGA	7 cut(s)	22, 64, 91, 127, 152, 569, 997
TasI	AATT	7 cut(s)	87, 188, 402, 545, 927, 1509, 1635
TatI	WGTACW	3 cut(s)	288, 1101, 1593
TfiI	GAWTC	7 cut(s)	121, 129, 181, 392, 594, 811, 1183
Tru1I	TTAA	5 cut(s)	192, 387, 656, 852, 1061
Tru9I	TTAA	5 cut(s)	192, 387, 656, 852, 1061
TscAI	CASTG	2 cut(s)	139, 838
TseFI	GTSAC	2 cut(s)	1498, 1521
TseI	GCWGC	7 cut(s)	283, 329, 371, 968, 971, 1311, 1656
Tsp45I	GTSAC	2 cut(s)	1498, 1521
TspGWI	ACGGA	1 cut(s)	293
TspRI	CASTG	2 cut(s)	139, 838
XapI	RAATTY	3 cut(s)	87, 545, 927
XceI	RCATGY	1 cut(s)	1467
XhoI	CTCGAG	1 cut(s)	996
XmiI	GTMKAC	1 cut(s)	1578
XmnI	GAANNNNTTC	1 cut(s)	1374
XspI	CTAG	3 cut(s)	516, 686, 1475
ZrmI	AGTACT	1 cut(s)	1103
Zsp2I	ATGCAT	1 cut(s)	1469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.