Rmu_sc0001851.1_g000030

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001851.1
Physical Location & Seq
Reverse (-)
163688 .. 167924
4237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001851.1_g000030.1.cds

Sequence Viewer

Length: 1368 bp
atggcgggtagaaagcttgttcgagatttgttcctccacagacaatcccttcttcttcttcagtctcgacaacaggtttctggcacgagaattcgattgctttcggaaaatgggtattgggggaatcgtcgattcagtgtcttcaatgagttttccaagcaggtcaaggaggaaaccaataaaacgaagcagacaacggagcagctgtacaagcaggtggatggtgtttggacagaggctgaagaagcagcaaagaaggtctctgcaaatgtaaaagagaagatctcggctgccacagaagaggttaaagaatcttttggaattgggaaagagcaggcttcagggccttctggtgcttcagctgatcatgttgctgatgaaaaagatggaagtaaggcctcgtcctcggaagataaacaccagcactcagggtctagtgatactgcagaaacattatttggaaaatttaggtcaagggtgtcttcatcgaatgtttcctctgtctttcatagattcaaggaagcaaagtttgttgacatggccaaaaaaggatatgacattgtaagggatgagttaaatggtagtccgagtaagaaaaagcatctagggtttgacccttcttccatcccaagagttgaaagaagtgcaacaagcaacattgctattgtacccaccaaacaatctcgttggagcaaaaagtgggaggctttcagaatgaagatgcaagggaatcctctattcaagcgtatcagtgggataagtgaacctgttaaaatgaaaggcgaggagattatgggtgacatgaaagaacgctgggaaactactgatagcccaatagttcacaaaattcaggatatcaatgaagctatttttcaagaaacaaatgctgctgcatcaatcaaggagatccatgctcgagatccatctttctctttaccagattttgtggtagaagttcagaatgcagtcaaacctgtgttaaatgcttacatgaagggagatattgaaacattgaagaagtactgtgctaatgaggtgattgagcggtgtaaagctgagcgtcaggcttttcaaagccatggcatcttttttgataacaagattctacatatatctgaggtggaagtaagagaaaccaaactgatgggagactctcccataatcattgtagggttccaaacacagcaagtctattgtgtacgtgataaaaatggtgcaataacagaaggcagccaggatacaatccaaaccgtgtattacgcctgggccatgcaaccttgggatcccgaagaacttcctgaaggtgctcttttcccgatatggagagtaagagagatgcaacaatttggaattcaatcccttatttag

Protein Analysis

455

Amino Acids

51.48

Weight (kDa)

8.46

Isoelectric Point (pI)

47.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 205
Acc36I ACCTGC 2 cut(s) 151, 205
AccBSI CCGCTC 1 cut(s) 1045
AciI CCGC 2 cut(s) 5, 1045
AclWI GGATC 4 cut(s) 901, 914, 1277, 1290
AcoI YGGCCR 1 cut(s) 540
AcsI RAATTY 4 cut(s) 90, 464, 846, 1350
AcuI CTGAAG 5 cut(s) 44, 261, 324, 342, 1320
AfaI GTAC 4 cut(s) 209, 669, 1022, 1200
AgsI TTSAA 9 cut(s) 145, 517, 638, 742, 875, 1007, 1015, 1073, 1355
AjnI CCWGG 2 cut(s) 1233, 1262
AjuI GAANNNNNNNTTGG 2 cut(s) 441, 473
AluBI AGCT 5 cut(s) 16, 205, 362, 866, 1055
AluI AGCT 5 cut(s) 16, 205, 362, 866, 1055
Alw21I GWGCWC 1 cut(s) 1309
Alw26I GTCTC 3 cut(s) 69, 265, 1143
AlwI GGATC 4 cut(s) 901, 914, 1277, 1290
AlwNI CAGNNNCTG 1 cut(s) 239
Ama87I CYCGRG 1 cut(s) 915
AoxI GGCC 4 cut(s) 344, 396, 540, 1266
ApeKI GCWGC 6 cut(s) 202, 248, 290, 887, 890, 1230
ApoI RAATTY 4 cut(s) 90, 464, 846, 1350
Asp700I GAANNNNTTC 1 cut(s) 1293
AspS9I GGNCC 2 cut(s) 344, 1266
AsuHPI GGTGA 2 cut(s) 809, 1048
AvaI CYCGRG 1 cut(s) 915
BalI TGGCCA 1 cut(s) 542
BamHI GGATCC 1 cut(s) 1282
BauI CACGAG 1 cut(s) 85
BbsI GAAGAC 2 cut(s) 133, 474
Bbv12I GWGCWC 1 cut(s) 1309
BbvI GCAGC 6 cut(s) 214, 260, 277, 874, 877, 1242
BccI CCATC 5 cut(s) 215, 380, 632, 931, 1138
BciT130I CCWGG 2 cut(s) 1235, 1264
BciVI GTATCC 1 cut(s) 1231
BclI TGATCA 1 cut(s) 364
BcoDI GTCTC 3 cut(s) 69, 265, 1143
BfaI CTAG 2 cut(s) 435, 605
BfmI CTRYAG 1 cut(s) 444
BfuAI ACCTGC 2 cut(s) 151, 205
BfuI GTATCC 1 cut(s) 1231
BglII AGATCT 1 cut(s) 282
BisI GCNGC 6 cut(s) 203, 249, 291, 888, 891, 1231
BlpI GCTNAGC 1 cut(s) 1056
BlsI GCNGC 6 cut(s) 204, 250, 292, 889, 892, 1232
BmcAI AGTACT 1 cut(s) 1022
Bme1390I CCNGG 2 cut(s) 1235, 1264
BmeT110I CYCGRG 1 cut(s) 915
BmgT120I GGNCC 2 cut(s) 344, 1266
BmiI GGNNCC 2 cut(s) 1175, 1284
BmrFI CCNGG 2 cut(s) 1235, 1264
BmsI GCATC 5 cut(s) 610, 711, 902, 1092, 1326
BpiI GAAGAC 2 cut(s) 133, 474
BplI GAGNNNNNCTC 2 cut(s) 269, 301
Bpu1102I GCTNAGC 1 cut(s) 1056
BsaAI YACGTR 1 cut(s) 1202
BsaI GGTCTC 1 cut(s) 265
BsaJI CCNNGG 4 cut(s) 405, 1078, 1263, 1277
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bse3DI GCAATG 1 cut(s) 657
BseBI CCWGG 2 cut(s) 1235, 1264
BseDI CCNNGG 4 cut(s) 405, 1078, 1263, 1277
BseGI GGATG 3 cut(s) 226, 574, 624
BseMI GCAATG 1 cut(s) 657
BseMII CTCAG 3 cut(s) 441, 1047, 1107
BseRI GAGGAG 1 cut(s) 800
BseXI GCAGC 6 cut(s) 214, 260, 277, 874, 877, 1242
BseYI CCCAGC 1 cut(s) 813
BshFI GGCC 4 cut(s) 346, 398, 542, 1268
BsiHKAI GWGCWC 1 cut(s) 1309
BsiHKCI CYCGRG 1 cut(s) 915
BsmAI GTCTC 3 cut(s) 69, 265, 1143
BsmI GAATGC 1 cut(s) 967
BsnI GGCC 4 cut(s) 346, 398, 542, 1268
Bso31I GGTCTC 1 cut(s) 265
BsoBI CYCGRG 1 cut(s) 915
Bsp1286I GDGCHC 1 cut(s) 1309
Bsp1407I TGTACA 1 cut(s) 207
Bsp143I GATC 5 cut(s) 282, 364, 906, 919, 1282
Bsp1720I GCTNAGC 1 cut(s) 1056
Bsp19I CCATGG 1 cut(s) 1078
BspACI CCGC 2 cut(s) 5, 1045
BspANI GGCC 4 cut(s) 346, 398, 542, 1268
BspCNI CTCAG 3 cut(s) 440, 1048, 1108
BspLI GGNNCC 2 cut(s) 1175, 1284
BspMAI CTGCAG 1 cut(s) 448
BspMI ACCTGC 2 cut(s) 151, 205
BspPI GGATC 4 cut(s) 901, 914, 1277, 1290
BspTNI GGTCTC 1 cut(s) 265
BsrBI CCGCTC 1 cut(s) 1045
BsrDI GCAATG 1 cut(s) 657
BsrGI TGTACA 1 cut(s) 207
BssECI CCNNGG 4 cut(s) 405, 1078, 1263, 1277
BssMI GATC 5 cut(s) 282, 364, 906, 919, 1282
BssSI CACGAG 1 cut(s) 85
BssT1I CCWWGG 2 cut(s) 1078, 1277
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 2 cut(s) 1235, 1264
Bst4CI ACNGT 2 cut(s) 1025, 1252
Bst6I CTCTTC 1 cut(s) 294
BstAUI TGTACA 1 cut(s) 207
BstBAI YACGTR 1 cut(s) 1202
BstC8I GCNNGC 1 cut(s) 336
BstDEI CTNAG 3 cut(s) 427, 1056, 1116
BstDSI CCRYGG 1 cut(s) 1078
BstF5I GGATG 3 cut(s) 226, 574, 624
BstKTI GATC 5 cut(s) 285, 367, 909, 922, 1285
BstMAI GTCTC 3 cut(s) 69, 265, 1143
BstMBI GATC 5 cut(s) 282, 364, 906, 919, 1282
BstMWI GCNNNNNNNGC 2 cut(s) 211, 245
BstNI CCWGG 2 cut(s) 1235, 1264
BstSCI CCNGG 2 cut(s) 1233, 1262
BstSFI CTRYAG 1 cut(s) 444
BstV1I GCAGC 6 cut(s) 214, 260, 277, 874, 877, 1242
BstV2I GAAGAC 2 cut(s) 133, 474
BstX2I RGATCY 4 cut(s) 282, 906, 919, 1282
BstXI CCANNNNNNTGG 1 cut(s) 1144
BstYI RGATCY 4 cut(s) 282, 906, 919, 1282
BsuI GTATCC 1 cut(s) 1231
BsuRI GGCC 4 cut(s) 346, 398, 542, 1268
BtgI CCRYGG 1 cut(s) 1078
BtsCI GGATG 3 cut(s) 226, 574, 624
BtsIMutI CAGTG 2 cut(s) 142, 757
BveI ACCTGC 2 cut(s) 151, 205
Cac8I GCNNGC 1 cut(s) 336
CaiI CAGNNNCTG 1 cut(s) 239
Cfr13I GGNCC 2 cut(s) 344, 1266
CseI GACGC 1 cut(s) 1049
Csp6I GTAC 4 cut(s) 208, 668, 1021, 1199
CviAII CATG 7 cut(s) 368, 538, 802, 911, 991, 1079, 1270
CviQI GTAC 4 cut(s) 208, 668, 1021, 1199
DdeI CTNAG 3 cut(s) 427, 1056, 1116
DpnI GATC 5 cut(s) 284, 366, 908, 921, 1284
DpnII GATC 5 cut(s) 282, 364, 906, 919, 1282
EaeI YGGCCR 1 cut(s) 540
Eam1104I CTCTTC 1 cut(s) 294
EarI CTCTTC 1 cut(s) 294
Eco130I CCWWGG 2 cut(s) 1078, 1277
Eco147I AGGCCT 1 cut(s) 398
Eco31I GGTCTC 1 cut(s) 265
Eco32I GATATC 1 cut(s) 856
Eco57I CTGAAG 5 cut(s) 44, 261, 324, 342, 1320
Eco88I CYCGRG 1 cut(s) 915
EcoO109I RGGNCCY 1 cut(s) 344
EcoRI GAATTC 2 cut(s) 90, 1350
EcoRII CCWGG 2 cut(s) 1233, 1262
EcoRV GATATC 1 cut(s) 856
EcoT14I CCWWGG 2 cut(s) 1078, 1277
ErhI CCWWGG 2 cut(s) 1078, 1277
FaeI CATG 7 cut(s) 371, 541, 805, 914, 994, 1082, 1273
FalI AAGNNNNNCTT 4 cut(s) 466, 498, 1293, 1325
FatI CATG 7 cut(s) 367, 537, 801, 910, 990, 1078, 1269
FbaI TGATCA 1 cut(s) 364
Fnu4HI GCNGC 6 cut(s) 203, 249, 291, 888, 891, 1231
FokI GGATG 3 cut(s) 233, 581, 611
Fsp4HI GCNGC 6 cut(s) 203, 249, 291, 888, 891, 1231
FspBI CTAG 2 cut(s) 435, 605
GluI GCNGC 6 cut(s) 203, 249, 291, 888, 891, 1231
GsaI CCCAGC 1 cut(s) 817
HaeIII GGCC 4 cut(s) 346, 398, 542, 1268
HgaI GACGC 1 cut(s) 1049
Hin1II CATG 7 cut(s) 371, 541, 805, 914, 994, 1082, 1273
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 7 cut(s) 124, 132, 311, 513, 730, 1102, 1151
HphI GGTGA 2 cut(s) 809, 1048
Hpy166II GTNNAC 4 cut(s) 535, 764, 841, 1199
Hpy188I TCNGA 6 cut(s) 106, 409, 588, 713, 960, 1117
Hpy188III TCNNGA 8 cut(s) 23, 66, 851, 875, 917, 1286, 1298, 1315
Hpy8I GTNNAC 4 cut(s) 535, 764, 841, 1199
Hpy99I CGWCG 1 cut(s) 132
HpyAV CCTTC 7 cut(s) 59, 250, 357, 627, 988, 1220, 1295
HpyCH4III ACNGT 2 cut(s) 1025, 1252
HpyCH4IV ACGT 1 cut(s) 1201
HpyCH4V TGCA 9 cut(s) 266, 446, 647, 724, 893, 965, 1217, 1273, 1339
HpyF10VI GCNNNNNNNGC 2 cut(s) 211, 245
HpyF3I CTNAG 3 cut(s) 427, 1056, 1116
HpySE526I ACGT 1 cut(s) 1201
Hsp92II CATG 7 cut(s) 371, 541, 805, 914, 994, 1082, 1273
Ksp22I TGATCA 1 cut(s) 364
Kzo9I GATC 5 cut(s) 282, 364, 906, 919, 1282
LmnI GCTCC 2 cut(s) 199, 690
Lsp1109I GCAGC 6 cut(s) 214, 260, 277, 874, 877, 1242
LweI GCATC 5 cut(s) 610, 711, 902, 1092, 1326
MaeI CTAG 2 cut(s) 435, 605
MaeII ACGT 1 cut(s) 1201
MaeIII GTNAC 1 cut(s) 797
MalI GATC 5 cut(s) 284, 366, 908, 921, 1284
MbiI CCGCTC 1 cut(s) 1045
MboI GATC 5 cut(s) 282, 364, 906, 919, 1282
MflI RGATCY 4 cut(s) 282, 906, 919, 1282
MhlI GDGCHC 1 cut(s) 1309
MlsI TGGCCA 1 cut(s) 542
MluCI AATT 6 cut(s) 90, 321, 464, 846, 1343, 1350
MluNI TGGCCA 1 cut(s) 542
MlyI GAGTC 1 cut(s) 1145
MmeI TCCRAC 1 cut(s) 668
Mox20I TGGCCA 1 cut(s) 542
MroXI GAANNNNTTC 1 cut(s) 1293
MscI TGGCCA 1 cut(s) 542
MseI TTAA 4 cut(s) 306, 575, 771, 980
Msp20I TGGCCA 1 cut(s) 542
MspA1I CMGCKG 2 cut(s) 205, 362
MspR9I CCNGG 2 cut(s) 1235, 1264
Mva1269I GAATGC 1 cut(s) 967
MvaI CCWGG 2 cut(s) 1235, 1264
MwoI GCNNNNNNNGC 2 cut(s) 211, 245
NcoI CCATGG 1 cut(s) 1078
NdeII GATC 5 cut(s) 282, 364, 906, 919, 1282
NlaIII CATG 7 cut(s) 371, 541, 805, 914, 994, 1082, 1273
NlaIV GGNNCC 2 cut(s) 1175, 1284
NmeAIII GCCGAG 1 cut(s) 266
NmuCI GTSAC 1 cut(s) 797
PaeR7I CTCGAG 1 cut(s) 915
PaqCI CACCTGC 1 cut(s) 205
PceI AGGCCT 1 cut(s) 398
PctI GAATGC 1 cut(s) 967
PdmI GAANNNNTTC 1 cut(s) 1293
PfeI GAWTC 6 cut(s) 124, 132, 311, 513, 730, 1102
PkrI GCNGC 6 cut(s) 204, 250, 292, 889, 892, 1232
PleI GAGTC 1 cut(s) 1145
PpsI GAGTC 1 cut(s) 1145
Ppu21I YACGTR 1 cut(s) 1202
Psp6I CCWGG 2 cut(s) 1233, 1262
PspFI CCCAGC 1 cut(s) 813
PspGI CCWGG 2 cut(s) 1233, 1262
PspN4I GGNNCC 2 cut(s) 1175, 1284
PspPI GGNCC 2 cut(s) 344, 1266
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 239
PsuI RGATCY 4 cut(s) 282, 906, 919, 1282
PvuII CAGCTG 2 cut(s) 205, 362
RsaI GTAC 4 cut(s) 209, 669, 1022, 1200
RsaNI GTAC 4 cut(s) 208, 668, 1021, 1199
SaqAI TTAA 4 cut(s) 306, 575, 771, 980
SatI GCNGC 6 cut(s) 203, 249, 291, 888, 891, 1231
Sau3AI GATC 5 cut(s) 282, 364, 906, 919, 1282
Sau96I GGNCC 2 cut(s) 344, 1266
ScaI AGTACT 1 cut(s) 1022
SchI GAGTC 1 cut(s) 1145
ScrFI CCNGG 2 cut(s) 1235, 1264
SduI GDGCHC 1 cut(s) 1309
SfaNI GCATC 5 cut(s) 610, 711, 902, 1092, 1326
SfcI CTRYAG 1 cut(s) 444
Sfr274I CTCGAG 1 cut(s) 915
SlaI CTCGAG 1 cut(s) 915
SmlI CTYRAG 1 cut(s) 915
SmoI CTYRAG 1 cut(s) 915
Sse9I AATT 6 cut(s) 90, 321, 464, 846, 1343, 1350
SseBI AGGCCT 1 cut(s) 398
SsiI CCGC 2 cut(s) 5, 1045
SspMI CTAG 2 cut(s) 435, 605
StuI AGGCCT 1 cut(s) 398
StyD4I CCNGG 2 cut(s) 1233, 1262
StyI CCWWGG 2 cut(s) 1078, 1277
TaaI ACNGT 2 cut(s) 1025, 1252
TaiI ACGT 1 cut(s) 1204
TaqI TCGA 6 cut(s) 22, 67, 94, 130, 488, 916
TasI AATT 6 cut(s) 90, 321, 464, 846, 1343, 1350
TatI WGTACW 2 cut(s) 207, 1020
TfiI GAWTC 6 cut(s) 124, 132, 311, 513, 730, 1102
Tru1I TTAA 4 cut(s) 306, 575, 771, 980
Tru9I TTAA 4 cut(s) 306, 575, 771, 980
TscAI CASTG 2 cut(s) 142, 757
TseFI GTSAC 1 cut(s) 797
TseI GCWGC 6 cut(s) 202, 248, 290, 887, 890, 1230
Tsp45I GTSAC 1 cut(s) 797
TspDTI ATGAA 8 cut(s) 393, 474, 497, 731, 791, 818, 876, 1007
TspGWI ACGGA 1 cut(s) 212
TspRI CASTG 2 cut(s) 142, 757
XapI RAATTY 4 cut(s) 90, 464, 846, 1350
XhoI CTCGAG 1 cut(s) 915
XmnI GAANNNNTTC 1 cut(s) 1293
XspI CTAG 2 cut(s) 435, 605
ZrmI AGTACT 1 cut(s) 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.