Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002193.1

Orthogroup ID

OG0002261

Physical Location & Seq

Genomic Coordinates Reverse (-)

12959 .. 16788

Gene Structure 3830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002193.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

atgtacggctaccaaatcccggagttcggcagccttatggtccaggtcatcgtgctccagtgcatcatttggtacactgttgctcttcctcttcgagtaccgcaacgccaagttgctaataatagagcagttcccggagaccgccgccttcatcgtctccttcaaggtcaacgccggatcgacctgaacgatctggagcaatcccattaccggcgaatcggtgccgatactgtagaagcaggtatcgactccgccgtcgatgatgaaaacgaagagatcggaatccaccatggcaccatccaatctttattctcatcagatgatgtctccaaagctctgaaaccatcaaagcagacgactttacagaaacccagaagagcagacatggagaagaagctctcagatgtagccatcgaaggaagcgtgaagaagctcaatgatctgatccaacaagacccacttgtgttagacagggctttagtttcatccttgtctgaaaccccacttcatatagcttcaatgttgggccatttggacttggtcaaagagctactgagccgcaagcccgagttcgccaccgagttggactcgcgcgggtcgaccccgctccacctggcggccgccaatggacacgtgggggtcgtgagggagctgctctgggcggacgcggcggcgtgtttggtgaggaaccaggatgggaggacggcgctccacgtggcggctgttaaggggagagttgaggtggtgggggagttggtccgagccaggactgagtcgactcgggcgttgaccgatagaggggagagtgtgatgcatttgtgtgtggggagtcacaggctggagggtttaagggttttggtggagtgtgttggaaaagatgatcagcttgtgaatttgaaggatgggaatggtaacaccattttgcatattgctgtggccaagaagcaagttgagatcatcaagtttttgctgaccagtactgcggtgaatgtgaacgctttggatgtgaatggctctactgcattagacattctactgcagagtcctagagatttgaaggacatggagattgaggattctcttagagaggttggggcacaaagggcaaaggatatgcgttcaattgagcatgaatgggttccgaaaaaagaacctcagataacaagacgtgtagcctcagtagtgtcttcgaatggggaaaggacgatgacaagacgcgcaacgtcagtagtatccactagtggtgaacgccagacaacgaggcgcctaggctcagcagtatcctcaaaagagagtgattccaacaaaccggaggtgaatcagaagcctactgagtggcttggcaggaagagagattccttgatggtggtggcatcactacttgcaactgtagccttccaagctgcaataactccacctggaggtgtttggcaagatgaccgtcaagtagacgaaaatggtaacccagttgataatcctcacagcgtaggaacatctatcatggcctctcaaaacagaaaagagtatggtgtattcatgatttttaacacaatcgctttcctctcatctctgagcataattcttcttcttgttagtgggctgcctataaaaaagcggaggtggatgtggatacaaatgatcataacgtggattgccatctctacactaggcgcaacttactttctctcactccgtcacatgtcccctaagaatgtggaaaatgtgttgcgtcaggtctcatcgatatctgttttgacatggttgtgtttgatcttgcttgttttgatagggaatgtcatacgtttgaatttatgggttctcagaaagtatggttatataaagccaaaagaggaagacccatcagctacaattgatgaagaacttgaagatgtgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

631

Amino Acids

70.11

Weight (kDa)

8.15

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002261)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08140 FvH4_2g31310 FvH4_2g31340
malus_domestica	MD02G1085900.v1.1 MD08G1068900.v1.1 MD15G1053400.v1.1 MD15G1213100.v1.1
prunus_persica	Prupe.1G407000_v2.0.a1 Prupe.7G203800_v2.0.a1
pyrus_communis	pycom02g06910 pycom08g05680 pycom15g05070 pycom15g18950
rosa_chinensis	RchiOBHm_Chr2g0094191 RchiOBHm_Chr2g0094201 RchiOBHm_Chr6g0311481
rosa_laevigata	RLG00000010402 RLG00000016464 RLG00000016465
rosa_multiflora	Rmu_sc0002193.1_g000004 Rmu_sc0002193.1_g000006 Rmu_sc0006915.1_g000013 Rmu_sc0013176.1_g000001 Rmu_sc0013619.1_g000007 Rmu_sc0015790.1_g000005
rosa_roxburghii	Rroxscaffold_2G00147390 Rroxscaffold_2G00147400 Rroxscaffold_7G00157580
rosa_rugosa	Rorug02G0041700 Rorug02G0041700 Rorug06G0389300
rosa_samantha	Rh2AG089400 Rh2AG089500 Rh2BG089500 Rh2BG089600 Rh2CG092000 Rh2CG092100 Rh2DG088500 Rh6AG503800 Rh6BG514400 Rh6CG520200 Rh6DG506300
rosa_wichuraiana	Rw6G043880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	254
Acc36I	ACCTGC	1 cut(s)	230
AccB1I	GGYRCC	3 cut(s)	221, 293, 1263
AccBSI	CCGCTC	1 cut(s)	607
AccI	GTMKAC	3 cut(s)	599, 776, 1449
AccII	CGCG	4 cut(s)	592, 594, 668, 1218
AclWI	GGATC	2 cut(s)	185, 439
AcoI	YGGCCR	2 cut(s)	618, 936
AcsI	RAATTY	2 cut(s)	892, 1807
AcvI	CACGTG	2 cut(s)	634, 715
AcyI	GRCGYC	1 cut(s)	1264
AfaI	GTAC	4 cut(s)	5, 74, 99, 979
AfiI	CCNNNNNNNGG	7 cut(s)	19, 26, 210, 616, 718, 798, 1421
AflIII	ACRYGT	3 cut(s)	631, 1168, 1698
AgsI	TTSAA	7 cut(s)	164, 519, 898, 1057, 1122, 1807, 1886
AhlI	ACTAGT	1 cut(s)	1238
AjiI	CACGTC	1 cut(s)	1169
AjnI	CCWGG	5 cut(s)	42, 612, 690, 764, 1417
AluBI	AGCT	9 cut(s)	335, 397, 433, 515, 550, 652, 886, 1403, 1865
AluI	AGCT	9 cut(s)	335, 397, 433, 515, 550, 652, 886, 1403, 1865
Alw21I	GWGCWC	1 cut(s)	57
Alw26I	GTCTC	4 cut(s)	132, 161, 331, 1741
AlwI	GGATC	2 cut(s)	185, 439
Ama87I	CYCGRG	2 cut(s)	566, 780
AoxI	GGCC	4 cut(s)	526, 618, 936, 1503
ApeKI	GCWGC	4 cut(s)	30, 652, 1403, 1600
ApoI	RAATTY	2 cut(s)	892, 1807
Asp700I	GAANNNNTTC	1 cut(s)	1137
AspA2I	CCTAGG	1 cut(s)	1267
AspLEI	GCGC	5 cut(s)	594, 709, 1220, 1266, 1673
AspS9I	GGNCC	3 cut(s)	40, 526, 757
AsuC2I	CCSGG	2 cut(s)	20, 135
AsuHPI	GGTGA	4 cut(s)	694, 997, 1256, 1327
AsuII	TTCGAA	1 cut(s)	1190
AvaI	CYCGRG	2 cut(s)	566, 780
AvaII	GGWCC	2 cut(s)	40, 757
AvrII	CCTAGG	1 cut(s)	1267
BaeGI	GKGCMC	1 cut(s)	1099
BalI	TGGCCA	1 cut(s)	938
BanI	GGYRCC	3 cut(s)	221, 293, 1263
BbrPI	CACGTG	2 cut(s)	634, 715
BbsI	GAAGAC	2 cut(s)	1179, 1860
Bbv12I	GWGCWC	1 cut(s)	57
BbvI	GCAGC	4 cut(s)	42, 639, 1390, 1587
BccI	CCATC	8 cut(s)	305, 352, 419, 689, 896, 1357, 1664, 1867
BceAI	ACGGC	3 cut(s)	22, 239, 720
BciT130I	CCWGG	5 cut(s)	44, 614, 692, 766, 1419
BciVI	GTATCC	3 cut(s)	1243, 1291, 1623
BclI	TGATCA	2 cut(s)	880, 1638
BcnI	CCSGG	2 cut(s)	20, 135
BcoDI	GTCTC	4 cut(s)	132, 161, 331, 1741
BcuI	ACTAGT	1 cut(s)	1238
BfaI	CTAG	4 cut(s)	1047, 1239, 1268, 1667
BfmI	CTRYAG	3 cut(s)	231, 1037, 1389
BfoI	RGCGCY	2 cut(s)	710, 1267
BfuAI	ACCTGC	1 cut(s)	230
BfuI	GTATCC	3 cut(s)	1243, 1291, 1623
BlnI	CCTAGG	1 cut(s)	1267
BlpI	GCTNAGC	1 cut(s)	1273
BmcAI	AGTACT	1 cut(s)	979
Bme1390I	CCNGG	7 cut(s)	20, 44, 135, 614, 692, 766, 1419
Bme18I	GGWCC	2 cut(s)	40, 757
BmeT110I	CYCGRG	2 cut(s)	566, 780
BmgBI	CACGTC	1 cut(s)	1169
BmgT120I	GGNCC	3 cut(s)	40, 526, 757
BmiI	GGNNCC	5 cut(s)	223, 295, 689, 1140, 1265
BmrFI	CCNGG	7 cut(s)	20, 44, 135, 614, 692, 766, 1419
BmrI	ACTGGG	1 cut(s)	1460
BmsI	GCATC	3 cut(s)	72, 801, 1382
BmuI	ACTGGG	1 cut(s)	1460
BpiI	GAAGAC	2 cut(s)	1179, 1860
BplI	GAGNNNNNCTC	2 cut(s)	572, 604
BpmI	CTGGAG	4 cut(s)	41, 215, 860, 1440
Bpu1102I	GCTNAGC	1 cut(s)	1273
Bpu14I	TTCGAA	1 cut(s)	1190
BpuMI	CCSGG	2 cut(s)	20, 135
Bsa29I	ATCGAT	1 cut(s)	1742
BsaAI	YACGTR	2 cut(s)	634, 715
BsaBI	GATNNNNATC	2 cut(s)	281, 1655
BsaHI	GRCGYC	1 cut(s)	1264
BsaI	GGTCTC	2 cut(s)	132, 1741
BsaJI	CCNNGG	2 cut(s)	289, 1267
BsaWI	WCCGGW	1 cut(s)	1309
Bsc4I	CCNNNNNNNGG	7 cut(s)	19, 26, 210, 616, 718, 798, 1421
Bse118I	RCCGGY	1 cut(s)	210
Bse1I	ACTGG	3 cut(s)	58, 975, 1466
Bse8I	GATNNNNATC	2 cut(s)	281, 1655
BseBI	CCWGG	5 cut(s)	44, 614, 692, 766, 1419
BseCI	ATCGAT	1 cut(s)	1742
BseDI	CCNNGG	2 cut(s)	289, 1267
BseGI	GGATG	6 cut(s)	297, 485, 700, 907, 1009, 1629
BseJI	GATNNNNATC	2 cut(s)	281, 1655
BseLI	CCNNNNNNNGG	7 cut(s)	19, 26, 210, 616, 718, 798, 1421
BseMII	CTCAG	9 cut(s)	414, 545, 762, 1169, 1191, 1287, 1323, 1562, 1834
BseNI	ACTGG	3 cut(s)	58, 975, 1466
BseSI	GKGCMC	1 cut(s)	1099
BseX3I	CGGCCG	1 cut(s)	618
BseXI	GCAGC	4 cut(s)	42, 639, 1390, 1587
Bsh1236I	CGCG	4 cut(s)	592, 594, 668, 1218
Bsh1285I	CGRYCG	1 cut(s)	621
BshFI	GGCC	4 cut(s)	528, 620, 938, 1505
BshNI	GGYRCC	3 cut(s)	221, 293, 1263
BshVI	ATCGAT	1 cut(s)	1742
BsiEI	CGRYCG	1 cut(s)	621
BsiHKAI	GWGCWC	1 cut(s)	57
BsiHKCI	CYCGRG	2 cut(s)	566, 780
BsiSI	CCGG	5 cut(s)	20, 135, 175, 211, 1310
BslFI	GGGAC	1 cut(s)	1687
BslI	CCNNNNNNNGG	7 cut(s)	19, 26, 210, 616, 718, 798, 1421
BsmAI	GTCTC	4 cut(s)	132, 161, 331, 1741
BsmBI	CGTCTC	1 cut(s)	161
BsmFI	GGGAC	1 cut(s)	1687
BsnI	GGCC	4 cut(s)	528, 620, 938, 1505
Bso31I	GGTCTC	2 cut(s)	132, 1741
BsoBI	CYCGRG	2 cut(s)	566, 780
Bsp119I	TTCGAA	1 cut(s)	1190
Bsp1286I	GDGCHC	2 cut(s)	57, 1099
Bsp143I	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
Bsp1720I	GCTNAGC	1 cut(s)	1273
Bsp19I	CCATGG	1 cut(s)	289
BspANI	GGCC	4 cut(s)	528, 620, 938, 1505
BspCNI	CTCAG	9 cut(s)	413, 546, 763, 1168, 1190, 1286, 1324, 1563, 1833
BspDI	ATCGAT	1 cut(s)	1742
BspFNI	CGCG	4 cut(s)	592, 594, 668, 1218
BspHI	TCATGA	1 cut(s)	1536
BspLI	GGNNCC	5 cut(s)	223, 295, 689, 1140, 1265
BspMAI	CTGCAG	1 cut(s)	1041
BspMI	ACCTGC	1 cut(s)	230
BspPI	GGATC	2 cut(s)	185, 439
BspQI	GCTCTTC	2 cut(s)	90, 370
BspT104I	TTCGAA	1 cut(s)	1190
BspT107I	GGYRCC	3 cut(s)	221, 293, 1263
BspTNI	GGTCTC	2 cut(s)	132, 1741
BsrBI	CCGCTC	1 cut(s)	607
BsrFI	RCCGGY	1 cut(s)	210
BsrI	ACTGG	3 cut(s)	58, 975, 1466
BssAI	RCCGGY	1 cut(s)	210
BssECI	CCNNGG	2 cut(s)	289, 1267
BssMI	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
BssNI	GRCGYC	1 cut(s)	1264
BssT1I	CCWWGG	2 cut(s)	289, 1267
Bst2UI	CCWGG	5 cut(s)	44, 614, 692, 766, 1419
Bst4CI	ACNGT	4 cut(s)	79, 232, 1390, 1442
Bst6I	CTCTTC	5 cut(s)	90, 96, 267, 370, 1343
BstACI	GRCGYC	1 cut(s)	1264
BstBAI	YACGTR	2 cut(s)	634, 715
BstBI	TTCGAA	1 cut(s)	1190
BstC8I	GCNNGC	1 cut(s)	563
BstDSI	CCRYGG	1 cut(s)	289
BstEII	GGTNACC	1 cut(s)	1460
BstF5I	GGATG	6 cut(s)	297, 485, 700, 907, 1009, 1629
BstFNI	CGCG	4 cut(s)	592, 594, 668, 1218
BstH2I	RGCGCY	2 cut(s)	710, 1267
BstHHI	GCGC	5 cut(s)	594, 709, 1220, 1266, 1673
BstKTI	GATC	9 cut(s)	180, 193, 279, 442, 447, 883, 957, 1641, 1773
BstMAI	GTCTC	4 cut(s)	132, 161, 331, 1741
BstMBI	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
BstMCI	CGRYCG	1 cut(s)	621
BstMWI	GCNNNNNNNGC	4 cut(s)	668, 1103, 1391, 1400
BstNI	CCWGG	5 cut(s)	44, 614, 692, 766, 1419
BstNSI	RCATGY	1 cut(s)	1702
BstPI	GGTNACC	1 cut(s)	1460
BstSCI	CCNGG	7 cut(s)	18, 42, 133, 612, 690, 764, 1417
BstSFI	CTRYAG	3 cut(s)	231, 1037, 1389
BstSLI	GKGCMC	1 cut(s)	1099
BstUI	CGCG	4 cut(s)	592, 594, 668, 1218
BstV1I	GCAGC	4 cut(s)	42, 639, 1390, 1587
BstV2I	GAAGAC	2 cut(s)	1179, 1860
BstXI	CCANNNNNNTGG	1 cut(s)	583
BstZI	CGGCCG	1 cut(s)	618
Bsu15I	ATCGAT	1 cut(s)	1742
BsuI	GTATCC	3 cut(s)	1243, 1291, 1623
BsuRI	GGCC	4 cut(s)	528, 620, 938, 1505
BsuTUI	ATCGAT	1 cut(s)	1742
BtgI	CCRYGG	1 cut(s)	289
BtrI	CACGTC	1 cut(s)	1169
BtsCI	GGATG	6 cut(s)	297, 485, 700, 907, 1009, 1629
BtsIMutI	CAGTG	2 cut(s)	65, 75
BveI	ACCTGC	1 cut(s)	230
Cac8I	GCNNGC	1 cut(s)	563
CciI	TCATGA	1 cut(s)	1536
CciNI	GCGGCCGC	1 cut(s)	618
CfoI	GCGC	5 cut(s)	594, 709, 1220, 1266, 1673
Cfr10I	RCCGGY	1 cut(s)	210
Cfr13I	GGNCC	3 cut(s)	40, 526, 757
ClaI	ATCGAT	1 cut(s)	1742
CseI	GACGC	3 cut(s)	674, 1224, 1718
Csp6I	GTAC	4 cut(s)	4, 73, 98, 978
CviAII	CATG	8 cut(s)	290, 385, 1063, 1130, 1501, 1537, 1699, 1758
CviQI	GTAC	4 cut(s)	4, 73, 98, 978
DinI	GGCGCC	1 cut(s)	1265
DpnI	GATC	9 cut(s)	179, 192, 278, 441, 446, 882, 956, 1640, 1772
DpnII	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
DrdI	GACNNNNNNGTC	1 cut(s)	254
DseDI	GACNNNNNNGTC	1 cut(s)	254
EaeI	YGGCCR	2 cut(s)	618, 936
EagI	CGGCCG	1 cut(s)	618
Eam1104I	CTCTTC	5 cut(s)	90, 96, 267, 370, 1343
EarI	CTCTTC	5 cut(s)	90, 96, 267, 370, 1343
EciI	GGCGGA	2 cut(s)	241, 677
EclXI	CGGCCG	1 cut(s)	618
Eco130I	CCWWGG	2 cut(s)	289, 1267
Eco31I	GGTCTC	2 cut(s)	132, 1741
Eco32I	GATATC	1 cut(s)	1746
Eco47I	GGWCC	2 cut(s)	40, 757
Eco52I	CGGCCG	1 cut(s)	618
Eco72I	CACGTG	2 cut(s)	634, 715
Eco88I	CYCGRG	2 cut(s)	566, 780
Eco91I	GGTNACC	1 cut(s)	1460
EcoO65I	GGTNACC	1 cut(s)	1460
EcoRII	CCWGG	5 cut(s)	42, 612, 690, 764, 1417
EcoRV	GATATC	1 cut(s)	1746
EcoT14I	CCWWGG	2 cut(s)	289, 1267
EcoT22I	ATGCAT	1 cut(s)	816
EgeI	GGCGCC	1 cut(s)	1265
EheI	GGCGCC	1 cut(s)	1265
ErhI	CCWWGG	2 cut(s)	289, 1267
Esp3I	CGTCTC	1 cut(s)	161
FaeI	CATG	8 cut(s)	293, 388, 1066, 1133, 1504, 1540, 1702, 1761
FalI	AAGNNNNNCTT	2 cut(s)	444, 476
FaqI	GGGAC	1 cut(s)	1687
FatI	CATG	8 cut(s)	289, 384, 1062, 1129, 1500, 1536, 1698, 1757
FauI	CCCGC	2 cut(s)	587, 612
FbaI	TGATCA	2 cut(s)	880, 1638
FblI	GTMKAC	3 cut(s)	599, 776, 1449
FokI	GGATG	6 cut(s)	284, 472, 707, 914, 1016, 1636
FspBI	CTAG	4 cut(s)	1047, 1239, 1268, 1667
GlaI	GCGC	5 cut(s)	593, 708, 1219, 1265, 1672
GsuI	CTGGAG	4 cut(s)	41, 215, 860, 1440
HaeII	RGCGCY	2 cut(s)	710, 1267
HaeIII	GGCC	4 cut(s)	528, 620, 938, 1505
HapII	CCGG	5 cut(s)	20, 135, 175, 211, 1310
HgaI	GACGC	3 cut(s)	674, 1224, 1718
HhaI	GCGC	5 cut(s)	594, 709, 1220, 1266, 1673
Hin1I	GRCGYC	1 cut(s)	1264
Hin1II	CATG	8 cut(s)	293, 388, 1066, 1133, 1504, 1540, 1702, 1761
Hin6I	GCGC	5 cut(s)	592, 707, 1218, 1264, 1671
HinP1I	GCGC	5 cut(s)	592, 707, 1218, 1264, 1671
HincII	GTYRAC	4 cut(s)	170, 600, 777, 789
HindII	GTYRAC	4 cut(s)	170, 600, 777, 789
HpaII	CCGG	5 cut(s)	20, 135, 175, 211, 1310
HphI	GGTGA	4 cut(s)	694, 997, 1256, 1327
Hpy166II	GTNNAC	8 cut(s)	75, 170, 600, 777, 789, 994, 1247, 1450
Hpy188III	TCNNGA	3 cut(s)	194, 643, 1537
Hpy8I	GTNNAC	8 cut(s)	75, 170, 600, 777, 789, 994, 1247, 1450
Hpy99I	CGWCG	1 cut(s)	260
HpyAV	CCTTC	6 cut(s)	158, 170, 410, 892, 1051, 1405
HpyCH4III	ACNGT	4 cut(s)	79, 232, 1390, 1442
HpyCH4IV	ACGT	6 cut(s)	633, 714, 1168, 1223, 1646, 1801
HpyCH4V	TGCA	7 cut(s)	63, 814, 925, 1022, 1039, 1385, 1406
HpyF10VI	GCNNNNNNNGC	4 cut(s)	668, 1103, 1391, 1400
HpySE526I	ACGT	6 cut(s)	633, 714, 1168, 1223, 1646, 1801
Hsp92I	GRCGYC	1 cut(s)	1264
Hsp92II	CATG	8 cut(s)	293, 388, 1066, 1133, 1504, 1540, 1702, 1761
HspAI	GCGC	5 cut(s)	592, 707, 1218, 1264, 1671
KasI	GGCGCC	1 cut(s)	1263
Ksp22I	TGATCA	2 cut(s)	880, 1638
Kzo9I	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
LguI	GCTCTTC	2 cut(s)	90, 370
LmnI	GCTCC	5 cut(s)	60, 196, 612, 649, 714
Lsp1109I	GCAGC	4 cut(s)	42, 639, 1390, 1587
LweI	GCATC	3 cut(s)	72, 801, 1382
MaeI	CTAG	4 cut(s)	1047, 1239, 1268, 1667
MaeII	ACGT	6 cut(s)	633, 714, 1168, 1223, 1646, 1801
MaeIII	GTNAC	4 cut(s)	830, 911, 1460, 1694
MalI	GATC	9 cut(s)	179, 192, 278, 441, 446, 882, 956, 1640, 1772
MbiI	CCGCTC	1 cut(s)	607
MboI	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
MfeI	CAATTG	2 cut(s)	1122, 1869
MhlI	GDGCHC	2 cut(s)	57, 1099
MlsI	TGGCCA	1 cut(s)	938
MluCI	AATT	5 cut(s)	892, 1122, 1578, 1807, 1869
MluNI	TGGCCA	1 cut(s)	938
Mly113I	GGCGCC	1 cut(s)	1264
MlyI	GAGTC	6 cut(s)	242, 581, 772, 782, 838, 1051
MmeI	TCCRAC	4 cut(s)	472, 564, 850, 1326
Mox20I	TGGCCA	1 cut(s)	938
Mph1103I	ATGCAT	1 cut(s)	816
MroXI	GAANNNNTTC	1 cut(s)	1137
MscI	TGGCCA	1 cut(s)	938
MseI	TTAA	3 cut(s)	726, 848, 1545
MslI	CAYNNNNRTG	2 cut(s)	819, 1762
Msp20I	TGGCCA	1 cut(s)	938
MspI	CCGG	5 cut(s)	20, 135, 175, 211, 1310
MspR9I	CCNGG	7 cut(s)	20, 44, 135, 614, 692, 766, 1419
MunI	CAATTG	2 cut(s)	1122, 1869
MvaI	CCWGG	5 cut(s)	44, 614, 692, 766, 1419
MvnI	CGCG	4 cut(s)	592, 594, 668, 1218
MwoI	GCNNNNNNNGC	4 cut(s)	668, 1103, 1391, 1400
NarI	GGCGCC	1 cut(s)	1264
NciI	CCSGG	2 cut(s)	20, 135
NcoI	CCATGG	1 cut(s)	289
NdeII	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
NlaIII	CATG	8 cut(s)	293, 388, 1066, 1133, 1504, 1540, 1702, 1761
NlaIV	GGNNCC	5 cut(s)	223, 295, 689, 1140, 1265
NmuCI	GTSAC	2 cut(s)	830, 1694
NotI	GCGGCCGC	1 cut(s)	618
NsiI	ATGCAT	1 cut(s)	816
NspI	RCATGY	1 cut(s)	1702
NspV	TTCGAA	1 cut(s)	1190
PagI	TCATGA	1 cut(s)	1536
PciI	ACATGT	1 cut(s)	1698
PciSI	GCTCTTC	2 cut(s)	90, 370
PcsI	WCGNNNNNNNCGW	6 cut(s)	186, 252, 420, 596, 639, 782
PdmI	GAANNNNTTC	1 cut(s)	1137
PfeI	GAWTC	6 cut(s)	216, 282, 1076, 1298, 1318, 1355
PflFI	GACNNNGTC	2 cut(s)	539, 772
PfoI	TCCNGGA	2 cut(s)	18, 133
PleI	GAGTC	6 cut(s)	242, 581, 772, 781, 837, 1050
PluTI	GGCGCC	1 cut(s)	1267
PmaCI	CACGTG	2 cut(s)	634, 715
PmlI	CACGTG	2 cut(s)	634, 715
PpsI	GAGTC	6 cut(s)	242, 581, 772, 781, 837, 1050
Ppu21I	YACGTR	2 cut(s)	634, 715
PscI	ACATGT	1 cut(s)	1698
Psp6I	CCWGG	5 cut(s)	42, 612, 690, 764, 1417
PspCI	CACGTG	2 cut(s)	634, 715
PspEI	GGTNACC	1 cut(s)	1460
PspGI	CCWGG	5 cut(s)	42, 612, 690, 764, 1417
PspN4I	GGNNCC	5 cut(s)	223, 295, 689, 1140, 1265
PspPI	GGNCC	3 cut(s)	40, 526, 757
PstI	CTGCAG	1 cut(s)	1041
PsyI	GACNNNGTC	2 cut(s)	539, 772
RsaI	GTAC	4 cut(s)	5, 74, 99, 979
RsaNI	GTAC	4 cut(s)	4, 73, 98, 978
RseI	CAYNNNNRTG	2 cut(s)	819, 1762
SalI	GTCGAC	2 cut(s)	598, 775
SapI	GCTCTTC	2 cut(s)	90, 370
SaqAI	TTAA	3 cut(s)	726, 848, 1545
Sau3AI	GATC	9 cut(s)	177, 190, 276, 439, 444, 880, 954, 1638, 1770
Sau96I	GGNCC	3 cut(s)	40, 526, 757
ScaI	AGTACT	1 cut(s)	979
SchI	GAGTC	6 cut(s)	242, 581, 772, 782, 838, 1051
ScrFI	CCNGG	7 cut(s)	20, 44, 135, 614, 692, 766, 1419
SduI	GDGCHC	2 cut(s)	57, 1099
SfaNI	GCATC	3 cut(s)	72, 801, 1382
SfcI	CTRYAG	3 cut(s)	231, 1037, 1389
SfoI	GGCGCC	1 cut(s)	1265
SfuI	TTCGAA	1 cut(s)	1190
SinI	GGWCC	2 cut(s)	40, 757
SmiMI	CAYNNNNRTG	2 cut(s)	819, 1762
SpeI	ACTAGT	1 cut(s)	1238
Sse9I	AATT	5 cut(s)	892, 1122, 1578, 1807, 1869
SspDI	GGCGCC	1 cut(s)	1263
SspMI	CTAG	4 cut(s)	1047, 1239, 1268, 1667
StyD4I	CCNGG	7 cut(s)	18, 42, 133, 612, 690, 764, 1417
StyI	CCWWGG	2 cut(s)	289, 1267
TaaI	ACNGT	4 cut(s)	79, 232, 1390, 1442
TaiI	ACGT	6 cut(s)	636, 717, 1171, 1226, 1649, 1804
TaqI	TCGA	9 cut(s)	94, 180, 246, 258, 414, 599, 776, 1190, 1742
TaqII	GACCGA	1 cut(s)	806
TasI	AATT	5 cut(s)	892, 1122, 1578, 1807, 1869
TatI	WGTACW	1 cut(s)	977
TauI	GCSGC	7 cut(s)	147, 561, 620, 623, 671, 674, 722
TfiI	GAWTC	6 cut(s)	216, 282, 1076, 1298, 1318, 1355
Tru1I	TTAA	3 cut(s)	726, 848, 1545
Tru9I	TTAA	3 cut(s)	726, 848, 1545
TscAI	CASTG	2 cut(s)	65, 82
TseFI	GTSAC	2 cut(s)	830, 1694
TseI	GCWGC	4 cut(s)	30, 652, 1403, 1600
Tsp45I	GTSAC	2 cut(s)	830, 1694
TspDTI	ATGAA	7 cut(s)	140, 279, 474, 497, 1146, 1525, 1890
TspGWI	ACGGA	1 cut(s)	1682
TspRI	CASTG	2 cut(s)	65, 82
Tth111I	GACNNNGTC	2 cut(s)	539, 772
VpaK11BI	GGWCC	2 cut(s)	40, 757
XapI	RAATTY	2 cut(s)	892, 1807
XceI	RCATGY	1 cut(s)	1702
XcmI	CCANNNNNNNNNTGG	1 cut(s)	631
XmaJI	CCTAGG	1 cut(s)	1267
XmiI	GTMKAC	3 cut(s)	599, 776, 1449
XmnI	GAANNNNTTC	1 cut(s)	1137
XspI	CTAG	4 cut(s)	1047, 1239, 1268, 1667
ZrmI	AGTACT	1 cut(s)	979
Zsp2I	ATGCAT	1 cut(s)	816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.