Rmu_sc0015790.1_g000005

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015790.1
Physical Location & Seq
Reverse (-)
14036 .. 16261
2226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015790.1_g000005.1.cds

Sequence Viewer

Length: 1410 bp
atggaagaagagcttcaccaagcagccctgaagggctccgtacctgctctcctcgacctcctcacacaacaccctcatatcctcaacggcaccccatctctctccgacacccccttacacgtcgccgccattctcggccactccgccttcgccgccgagttactcacccggagccccgaactcgcctcccggctcaatctccaaggctcctcgccgctccacctggcagcagcaaaagggtgcgaggagatagtcaaaagtctggcgctggtcaacgctgatctgggcttggtctgggatcgggatgggttgactcctctgcatctgggggtgatcaagggccgggttggggtggtggccgagttggcccgggttagaccggaggcggctcgggtgttgactcagggaggggagagtgggtttcacttgtgtgtgaagcatcataggttggaggtgttgaaggttttggtggggtgtgttgggaaagatgatgactttgtgaattggagggatggggatggcaacactgttttgcatgtggctgtggccaagaagcaattagaggtgataaattacttgctggacaatacaaagatcgaagtaaatgcccaaaattcaaatggcttcactgcattggatgtcttatcgcatagtactagagatttacgagacttggaaatcaaagaatcccttcaatttgccggagcttctaaaattattaagaaggcaccgtctgttatgtttgatcaagatacagtgcaagttcctagcacaatgcagccactgatgtcaaagaggaggagtttaaggcaactagtatttaagccgaagcagaaagaagttgattggttgggtaggaaacgaagttcattaatggttgtggcttcactaattgctacagtggcttttcagtctgcaataaacccgccaggtggtgtttggcagtcggactatctggaagatagcaatggcaaccctgtggataaaccacaccatgctgggcagtcagtgatggccgatacagaaccaagtctgtatggactgtacatgatttccaatacacttgctttcctttcatcactgagcataattctattacttgtgagtggattgcctatgaagcggcgcagatggatgtggattcagatggtgatcatgtgggttgcaatcacagcgctaacagctacgtattttcttggactgatatttatgacaccacaacagcagaaggggggttacctgtatcatgtgacccaagtttctgtgcttgtatggatggcactgatggggctcgtgtttatcggtaatgttgttcgggcagcaagatggctacttagaaagtatggatgcatgaagaagaaacctagagatgattcgctttatgaagattatgacattgatgacctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

469

Amino Acids

51.83

Weight (kDa)

8.5

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 52
AccB1I GGYRCC 2 cut(s) 89, 727
AccBSI CCGCTC 1 cut(s) 217
AciI CCGC 7 cut(s) 126, 144, 153, 215, 386, 926, 1123
AclWI GGATC 1 cut(s) 306
AcoI YGGCCR 4 cut(s) 136, 357, 546, 1014
AcsI RAATTY 1 cut(s) 613
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 3 cut(s) 42, 655, 1046
AfeI AGCGCT 1 cut(s) 1176
AfiI CCNNNNNNNGG 2 cut(s) 349, 932
AflIII ACRYGT 1 cut(s) 118
AgsI TTSAA 3 cut(s) 460, 618, 695
AhlI ACTAGT 1 cut(s) 814
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 2 cut(s) 222, 928
AleI CACNNNNGTG 1 cut(s) 429
AloI GAACNNNNNNTCC 2 cut(s) 850, 882
AluBI AGCT 3 cut(s) 13, 707, 1184
AluI AGCT 3 cut(s) 13, 707, 1184
Alw26I GTCTC 1 cut(s) 663
AlwI GGATC 1 cut(s) 306
AlwNI CAGNNNCTG 1 cut(s) 784
Ama87I CYCGRG 2 cut(s) 369, 390
Aor51HI AGCGCT 1 cut(s) 1176
AoxI GGCC 6 cut(s) 136, 340, 357, 366, 546, 1014
ApeKI GCWGC 5 cut(s) 23, 227, 230, 778, 1319
ApoI RAATTY 1 cut(s) 613
AseI ATTAAT 1 cut(s) 872
Asp700I GAANNNNTTC 2 cut(s) 12, 690
AspLEI GCGC 3 cut(s) 268, 1128, 1177
AspS9I GGNCC 2 cut(s) 340, 367
AsuC2I CCSGG 5 cut(s) 169, 190, 344, 370, 371
AsuHPI GGTGA 5 cut(s) 8, 157, 343, 577, 1162
AvaI CYCGRG 2 cut(s) 369, 390
BalI TGGCCA 1 cut(s) 548
BanI GGYRCC 2 cut(s) 89, 727
BanII GRGCYC 3 cut(s) 38, 176, 1293
BarI GAAGNNNNNNTAC 2 cut(s) 1220, 1252
BauI CACGAG 1 cut(s) 1292
BbvI GCAGC 5 cut(s) 35, 239, 242, 790, 1331
BceAI ACGGC 1 cut(s) 103
BcgI CGANNNNNNTGC 2 cut(s) 587, 621
BciT130I CCWGG 2 cut(s) 224, 930
BclI TGATCA 3 cut(s) 333, 745, 1152
BcnI CCSGG 5 cut(s) 169, 190, 344, 370, 371
BcoDI GTCTC 1 cut(s) 663
BcuI ACTAGT 1 cut(s) 814
BfaI CTAG 4 cut(s) 657, 768, 815, 1365
BfmI CTRYAG 1 cut(s) 897
BfoI RGCGCY 2 cut(s) 269, 1178
BfuAI ACCTGC 1 cut(s) 52
BglI GCCNNNNNGGC 1 cut(s) 365
BmcAI AGTACT 1 cut(s) 655
Bme1390I CCNGG 7 cut(s) 169, 190, 224, 344, 370, 371, 930
BmeT110I CYCGRG 2 cut(s) 369, 390
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 2 cut(s) 340, 367
BmiI GGNNCC 5 cut(s) 37, 91, 173, 208, 729
BmrFI CCNGG 7 cut(s) 169, 190, 224, 344, 370, 371, 930
BmsI GCATC 3 cut(s) 331, 448, 1337
BpuMI CCSGG 5 cut(s) 169, 190, 344, 370, 371
BsaAI YACGTR 1 cut(s) 1188
BsaBI GATNNNNATC 1 cut(s) 1151
BsaJI CCNNGG 2 cut(s) 202, 369
BsaWI WCCGGW 1 cut(s) 379
BsaXI ACNNNNNCTCC 4 cut(s) 33, 63, 404, 434
Bsc4I CCNNNNNNNGG 2 cut(s) 349, 932
Bse3DI GCAATG 1 cut(s) 973
Bse8I GATNNNNATC 1 cut(s) 1151
BseBI CCWGG 2 cut(s) 224, 930
BseDI CCNNGG 2 cut(s) 202, 369
BseGI GGATG 7 cut(s) 310, 517, 523, 643, 1140, 1281, 1352
BseJI GATNNNNATC 1 cut(s) 1151
BseLI CCNNNNNNNGG 2 cut(s) 349, 932
BseMI GCAATG 1 cut(s) 973
BseMII CTCAG 2 cut(s) 416, 1073
BseRI GAGGAG 7 cut(s) 41, 50, 199, 260, 306, 811, 814
BseXI GCAGC 5 cut(s) 35, 239, 242, 790, 1331
BseYI CCCAGC 1 cut(s) 998
BshFI GGCC 6 cut(s) 138, 342, 359, 368, 548, 1016
BshNI GGYRCC 2 cut(s) 89, 727
BsiHKCI CYCGRG 2 cut(s) 369, 390
BsiSI CCGG 6 cut(s) 169, 190, 343, 370, 380, 702
BslI CCNNNNNNNGG 2 cut(s) 349, 932
BsmAI GTCTC 1 cut(s) 663
BsnI GGCC 6 cut(s) 138, 342, 359, 368, 548, 1016
BsoBI CYCGRG 2 cut(s) 369, 390
Bsp1286I GDGCHC 3 cut(s) 38, 176, 1293
Bsp1407I TGTACA 1 cut(s) 1044
Bsp143I GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
BspACI CCGC 7 cut(s) 126, 144, 153, 215, 386, 926, 1123
BspANI GGCC 6 cut(s) 138, 342, 359, 368, 548, 1016
BspCNI CTCAG 2 cut(s) 415, 1074
BspLI GGNNCC 5 cut(s) 37, 91, 173, 208, 729
BspMI ACCTGC 1 cut(s) 52
BspPI GGATC 1 cut(s) 306
BspQI GCTCTTC 1 cut(s) 3
BspT107I GGYRCC 2 cut(s) 89, 727
BsrBI CCGCTC 1 cut(s) 217
BsrDI GCAATG 1 cut(s) 973
BsrGI TGTACA 1 cut(s) 1044
BssECI CCNNGG 2 cut(s) 202, 369
BssMI GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
BssSI CACGAG 1 cut(s) 1292
BssT1I CCWWGG 1 cut(s) 202
Bst2BI CACGAG 1 cut(s) 1292
Bst2UI CCWGG 2 cut(s) 224, 930
Bst4CI ACNGT 5 cut(s) 529, 732, 757, 901, 1044
Bst6I CTCTTC 1 cut(s) 3
BstAUI TGTACA 1 cut(s) 1044
BstBAI YACGTR 1 cut(s) 1188
BstDEI CTNAG 3 cut(s) 402, 1082, 1334
BstEII GGTNACC 1 cut(s) 1235
BstF5I GGATG 7 cut(s) 310, 517, 523, 643, 1140, 1281, 1352
BstH2I RGCGCY 2 cut(s) 269, 1178
BstHHI GCGC 3 cut(s) 268, 1128, 1177
BstKTI GATC 6 cut(s) 283, 301, 336, 597, 748, 1155
BstMAI GTCTC 1 cut(s) 663
BstMBI GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
BstMWI GCNNNNNNNGC 6 cut(s) 152, 365, 902, 1120, 1172, 1181
BstNI CCWGG 2 cut(s) 224, 930
BstNSI RCATGY 1 cut(s) 539
BstPI GGTNACC 1 cut(s) 1235
BstSCI CCNGG 7 cut(s) 167, 188, 222, 342, 368, 369, 928
BstSFI CTRYAG 1 cut(s) 897
BstSNI TACGTA 1 cut(s) 1188
BstV1I GCAGC 5 cut(s) 35, 239, 242, 790, 1331
BsuRI GGCC 6 cut(s) 138, 342, 359, 368, 548, 1016
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 7 cut(s) 310, 517, 523, 643, 1140, 1281, 1352
BtsI GCAGTG 1 cut(s) 627
BtsIMutI CAGTG 8 cut(s) 525, 627, 762, 782, 906, 1014, 1079, 1280
BveI ACCTGC 1 cut(s) 52
CaiI CAGNNNCTG 1 cut(s) 784
CfoI GCGC 3 cut(s) 268, 1128, 1177
Cfr13I GGNCC 2 cut(s) 340, 367
Cfr9I CCCGGG 1 cut(s) 369
Csp6I GTAC 3 cut(s) 41, 654, 1045
CviAII CATG 6 cut(s) 536, 995, 1048, 1156, 1247, 1351
CviQI GTAC 3 cut(s) 41, 654, 1045
DdeI CTNAG 3 cut(s) 402, 1082, 1334
DpnI GATC 6 cut(s) 282, 300, 335, 596, 747, 1154
DpnII GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
EaeI YGGCCR 4 cut(s) 136, 357, 546, 1014
Eam1104I CTCTTC 1 cut(s) 3
EarI CTCTTC 1 cut(s) 3
EciI GGCGGA 1 cut(s) 133
Eco105I TACGTA 1 cut(s) 1188
Eco130I CCWWGG 1 cut(s) 202
Eco24I GRGCYC 3 cut(s) 38, 176, 1293
Eco47III AGCGCT 1 cut(s) 1176
Eco57I CTGAAG 1 cut(s) 50
Eco88I CYCGRG 2 cut(s) 369, 390
Eco91I GGTNACC 1 cut(s) 1235
EcoO65I GGTNACC 1 cut(s) 1235
EcoRII CCWGG 2 cut(s) 222, 928
EcoT14I CCWWGG 1 cut(s) 202
EcoT22I ATGCAT 1 cut(s) 1352
EcoT38I GRGCYC 3 cut(s) 38, 176, 1293
ErhI CCWWGG 1 cut(s) 202
FaeI CATG 6 cut(s) 539, 998, 1051, 1159, 1250, 1354
FalI AAGNNNNNCTT 3 cut(s) 29, 675, 707
FatI CATG 6 cut(s) 535, 994, 1047, 1155, 1246, 1350
FauI CCCGC 1 cut(s) 933
FbaI TGATCA 3 cut(s) 333, 745, 1152
FokI GGATG 7 cut(s) 317, 524, 530, 650, 1147, 1288, 1359
FriOI GRGCYC 3 cut(s) 38, 176, 1293
FspBI CTAG 4 cut(s) 657, 768, 815, 1365
GlaI GCGC 3 cut(s) 267, 1127, 1176
GsaI CCCAGC 1 cut(s) 1002
HaeII RGCGCY 2 cut(s) 269, 1178
HaeIII GGCC 6 cut(s) 138, 342, 359, 368, 548, 1016
HapII CCGG 6 cut(s) 169, 190, 343, 370, 380, 702
HhaI GCGC 3 cut(s) 268, 1128, 1177
Hin1II CATG 6 cut(s) 539, 998, 1051, 1159, 1250, 1354
Hin6I GCGC 3 cut(s) 266, 1126, 1175
HinP1I GCGC 3 cut(s) 266, 1126, 1175
HincII GTYRAC 3 cut(s) 274, 312, 399
HindII GTYRAC 3 cut(s) 274, 312, 399
HinfI GANTC 5 cut(s) 313, 400, 686, 1141, 1373
HpaII CCGG 6 cut(s) 169, 190, 343, 370, 380, 702
HphI GGTGA 5 cut(s) 8, 157, 343, 577, 1162
Hpy166II GTNNAC 3 cut(s) 274, 312, 399
Hpy188I TCNGA 3 cut(s) 106, 949, 1146
Hpy188III TCNNGA 3 cut(s) 302, 749, 956
Hpy8I GTNNAC 3 cut(s) 274, 312, 399
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 6 cut(s) 25, 157, 454, 701, 718, 1222
HpyCH4III ACNGT 5 cut(s) 529, 732, 757, 901, 1044
HpyCH4IV ACGT 2 cut(s) 120, 1187
HpyCH4V TGCA 8 cut(s) 322, 535, 632, 760, 778, 917, 1166, 1350
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 365, 902, 1120, 1172, 1181
HpyF3I CTNAG 3 cut(s) 402, 1082, 1334
HpySE526I ACGT 2 cut(s) 120, 1187
Hsp92II CATG 6 cut(s) 539, 998, 1051, 1159, 1250, 1354
HspAI GCGC 3 cut(s) 266, 1126, 1175
Ksp22I TGATCA 3 cut(s) 333, 745, 1152
Kzo9I GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
LguI GCTCTTC 1 cut(s) 3
LmnI GCTCC 5 cut(s) 41, 171, 212, 222, 704
Lsp1109I GCAGC 5 cut(s) 35, 239, 242, 790, 1331
LweI GCATC 3 cut(s) 331, 448, 1337
MaeI CTAG 4 cut(s) 657, 768, 815, 1365
MaeII ACGT 2 cut(s) 120, 1187
MaeIII GTNAC 3 cut(s) 159, 1235, 1249
MalI GATC 6 cut(s) 282, 300, 335, 596, 747, 1154
MbiI CCGCTC 1 cut(s) 217
MboI GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
MboII GAAGA 6 cut(s) 17, 20, 971, 1366, 1369, 1397
MhlI GDGCHC 3 cut(s) 38, 176, 1293
MlsI TGGCCA 1 cut(s) 548
MluCI AATT 8 cut(s) 502, 557, 571, 613, 695, 714, 891, 1089
MluNI TGGCCA 1 cut(s) 548
MlyI GAGTC 2 cut(s) 307, 394
MmeI TCCRAC 3 cut(s) 129, 429, 927
Mox20I TGGCCA 1 cut(s) 548
Mph1103I ATGCAT 1 cut(s) 1352
MroXI GAANNNNTTC 2 cut(s) 12, 690
MscI TGGCCA 1 cut(s) 548
MseI TTAA 4 cut(s) 720, 806, 822, 872
MslI CAYNNNNRTG 1 cut(s) 429
Msp20I TGGCCA 1 cut(s) 548
MspI CCGG 6 cut(s) 169, 190, 343, 370, 380, 702
MspR9I CCNGG 7 cut(s) 169, 190, 224, 344, 370, 371, 930
MvaI CCWGG 2 cut(s) 224, 930
MwoI GCNNNNNNNGC 6 cut(s) 152, 365, 902, 1120, 1172, 1181
NciI CCSGG 5 cut(s) 169, 190, 344, 370, 371
NdeII GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
NlaIII CATG 6 cut(s) 539, 998, 1051, 1159, 1250, 1354
NlaIV GGNNCC 5 cut(s) 37, 91, 173, 208, 729
NmeAIII GCCGAG 3 cut(s) 114, 181, 385
NmuCI GTSAC 1 cut(s) 1249
NsiI ATGCAT 1 cut(s) 1352
NspI RCATGY 1 cut(s) 539
OliI CACNNNNGTG 1 cut(s) 429
PciSI GCTCTTC 1 cut(s) 3
PdmI GAANNNNTTC 2 cut(s) 12, 690
PfeI GAWTC 3 cut(s) 686, 1141, 1373
PleI GAGTC 2 cut(s) 307, 394
PpsI GAGTC 2 cut(s) 307, 394
Ppu21I YACGTR 1 cut(s) 1188
PshBI ATTAAT 1 cut(s) 872
Psp6I CCWGG 2 cut(s) 222, 928
PspEI GGTNACC 1 cut(s) 1235
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 2 cut(s) 222, 928
PspN4I GGNNCC 5 cut(s) 37, 91, 173, 208, 729
PspPI GGNCC 2 cut(s) 340, 367
PstNI CAGNNNCTG 1 cut(s) 784
RsaI GTAC 3 cut(s) 42, 655, 1046
RsaNI GTAC 3 cut(s) 41, 654, 1045
RseI CAYNNNNRTG 1 cut(s) 429
SapI GCTCTTC 1 cut(s) 3
SaqAI TTAA 4 cut(s) 720, 806, 822, 872
Sau3AI GATC 6 cut(s) 280, 298, 333, 594, 745, 1152
Sau96I GGNCC 2 cut(s) 340, 367
ScaI AGTACT 1 cut(s) 655
SchI GAGTC 2 cut(s) 307, 394
ScrFI CCNGG 7 cut(s) 169, 190, 224, 344, 370, 371, 930
SduI GDGCHC 3 cut(s) 38, 176, 1293
SfaNI GCATC 3 cut(s) 331, 448, 1337
SfcI CTRYAG 1 cut(s) 897
SfiI GGCCNNNNNGGCC 1 cut(s) 365
SmaI CCCGGG 1 cut(s) 371
SmiMI CAYNNNNRTG 1 cut(s) 429
SnaBI TACGTA 1 cut(s) 1188
SpeI ACTAGT 1 cut(s) 814
Sse9I AATT 8 cut(s) 502, 557, 571, 613, 695, 714, 891, 1089
SsiI CCGC 7 cut(s) 126, 144, 153, 215, 386, 926, 1123
SspMI CTAG 4 cut(s) 657, 768, 815, 1365
StyD4I CCNGG 7 cut(s) 167, 188, 222, 342, 368, 369, 928
StyI CCWWGG 1 cut(s) 202
TaaI ACNGT 5 cut(s) 529, 732, 757, 901, 1044
TaiI ACGT 2 cut(s) 123, 1190
TaqI TCGA 2 cut(s) 54, 597
TasI AATT 8 cut(s) 502, 557, 571, 613, 695, 714, 891, 1089
TatI WGTACW 2 cut(s) 653, 1044
TauI GCSGC 5 cut(s) 128, 155, 217, 389, 1126
TfiI GAWTC 3 cut(s) 686, 1141, 1373
Tru1I TTAA 4 cut(s) 720, 806, 822, 872
Tru9I TTAA 4 cut(s) 720, 806, 822, 872
TscAI CASTG 8 cut(s) 532, 634, 762, 789, 906, 1014, 1086, 1287
TseFI GTSAC 1 cut(s) 1249
TseI GCWGC 5 cut(s) 23, 227, 230, 778, 1319
Tsp45I GTSAC 1 cut(s) 1249
TspDTI ATGAA 5 cut(s) 858, 1065, 1133, 1367, 1398
TspGWI ACGGA 1 cut(s) 28
TspMI CCCGGG 1 cut(s) 369
TspRI CASTG 8 cut(s) 532, 634, 762, 789, 906, 1014, 1086, 1287
VspI ATTAAT 1 cut(s) 872
XapI RAATTY 1 cut(s) 613
XceI RCATGY 1 cut(s) 539
XcmI CCANNNNNNNNNTGG 2 cut(s) 617, 936
XmaI CCCGGG 1 cut(s) 369
XmnI GAANNNNTTC 2 cut(s) 12, 690
XspI CTAG 4 cut(s) 657, 768, 815, 1365
ZrmI AGTACT 1 cut(s) 655
Zsp2I ATGCAT 1 cut(s) 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.