Rroxscaffold_2G00147400

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0002261
Physical Location & Seq
Forward (+)
85240619 .. 85242769
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00147400.1

Sequence Viewer

Length: 1512 bp
ATGGAGAAGAAGCTCTCAGATGTAGCCATGGAAGGAAGCGTGAAGAAGCTCAATGATCTGATCCAACAAGACCCACTTGTGTTAGACAGAGCTTTAGTTTCATCCTTGTCTGAAACCCCACTTCACATAGCTTCAATGTTGGGCCATTTGGACTTGGTAAAAGCGCTACTGAGCCGCAAGCCCGAGTTCGCCACCGAGTTGGACTCGCGCGGATCGACCCCGCTCCACCTGGCGGCGGCCAAAGGACACGTGGGGGTCGTGAGGGAGCTGCTCTGGGCTGACGTGGCGGCGTGTTTGGTGAGGAACCAGGATGGGAGGACGGCGCTCCACGTGGCGGCTGTTAAGGGAAGAGTCGAGGTGGTGGGGGAGTTGGTCCAAGCCAGGACTGAGTCGACTCGGGCGTTGACCGACAGAGGGGAGAGTGTGATGCATTTGTGTGTGGGGAGTAATAGGTTGGATGGTTTAAGGGTTTTGGTGGAGTGTATTGGAAAAGATGATCAGCTTGTGAATTTGAAGGATGGGAATGGTAACACCATTTTGCATATTGCTGTGGCCAAGAAGCAAGTTGAGATCATCAAGTTTTTGCTGACCAGTACTGCAGTGAATGTGAACGCTTTGGATGTGAATGGCTCTACAGCATTAGACATTCTACTGCAGAGTCCTAGAGATTTGAAGGACATGGAGATTGAGGATTCTCTTAGAGTGGTTGGGGCACGAAGGGCAAAGGACATGCGTTCAATTGAGCATGAATGGGTTCCGAAAAAAGAACCTCAGATAACAAGACGTGTAGCCTCAGTAGTGTCTTCGAATGGGGAAAGGACGATGACAAGACGTGCAACGTCAGTAGTATCCACTAGTGGTGAACGCCAGACAACGAGGCGCCTAGGCTCAGCAGTATCATCAAAAGAGAGTGATTCTAACAAACCGGAGGTGAATCAGAAGCCTACTGAGTGGCTTGGCAGGAAGAGAGATTCATTGATGGTTGTGGCATCACTACTTGCAACTGTAGCCTTCCAAGCTGCAATAACTCCACCTGGAGGTGTTTGGCAAGATGACCGTCAAGTAGACGAAAATGGTAACCCTGTTGATAATCCTCACAGCGTAGGAACATCTATCATGGCCTCTCAAAACAGAAAAGAGTATGGTGTATTCATGATTTTTAACACAATCGCTTTCCTCTCATCTCTGAGCATAATTCTTCTTCTTGTTAGTGGGCTGCCTATAAAAAAGCGGAGGTGGATGTGGATACAAATGATCGTAACGTGGATTGCCATCTCTACACTAGGCGCAACTTACTTTCTCTCACTCCGTCACATGTCCCCTAAGAATGTGGAAAACGTGTTGCGTCAGGTCTCATCGATATCTGTTTTGACATGGTTGTGTTTGATCTTGCTTGTTTTGATAGGGAATGTCATACGTTTGAATTTATGGGTTCTCAGAAAGTATGGTTATATAAAGCCAAAAGAGGAAGACCCATCAGCTACAATTGATGAAGAATTTGAAGATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

503

Amino Acids

55.56

Weight (kDa)

8.88

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 8 - 91 5.7e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 41 - 88 1.3e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 68 - 112 7.4e-07 Ankyrin repeats (many copies)
Ank PF00023 71 - 97 8.7e-06 Ankyrin repeat
Ank_2 PF12796 100 - 164 4.4e-07 Ankyrin repeats (3 copies)
Ank_4 PF13637 144 - 196 1.3e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 166 - 216 3.9e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 169 - 216 4.4e-06 Ankyrin repeats (3 copies)
PGG PF13962 317 - 436 2.3e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 879
AccBSI CCGCTC 1 cut(s) 223
AccI GTMKAC 2 cut(s) 392, 1065
AccII CGCG 2 cut(s) 208, 210
AciI CCGC 8 cut(s) 175, 210, 221, 233, 236, 287, 335, 1231
AclWI GGATC 2 cut(s) 55, 220
AcoI YGGCCR 2 cut(s) 237, 552
AcsI RAATTY 3 cut(s) 508, 1423, 1496
AcvI CACGTG 2 cut(s) 250, 331
AcyI GRCGYC 1 cut(s) 880
AfaI GTAC 1 cut(s) 595
AfeI AGCGCT 1 cut(s) 165
AfiI CCNNNNNNNGG 5 cut(s) 232, 235, 334, 414, 1037
AflIII ACRYGT 4 cut(s) 247, 784, 1314, 1338
AgsI TTSAA 6 cut(s) 135, 514, 673, 738, 1423, 1502
AhlI ACTAGT 1 cut(s) 854
AjiI CACGTC 3 cut(s) 283, 785, 833
AjnI CCWGG 4 cut(s) 228, 306, 380, 1033
AluBI AGCT 8 cut(s) 13, 49, 92, 131, 268, 502, 1019, 1481
AluI AGCT 8 cut(s) 13, 49, 92, 131, 268, 502, 1019, 1481
Alw26I GTCTC 1 cut(s) 1357
AlwI GGATC 2 cut(s) 55, 220
Ama87I CYCGRG 2 cut(s) 182, 396
Aor51HI AGCGCT 1 cut(s) 165
AoxI GGCC 4 cut(s) 142, 237, 552, 1119
ApeKI GCWGC 3 cut(s) 268, 1019, 1216
ApoI RAATTY 3 cut(s) 508, 1423, 1496
Asp700I GAANNNNTTC 1 cut(s) 753
AspA2I CCTAGG 1 cut(s) 883
AspLEI GCGC 5 cut(s) 166, 210, 325, 882, 1289
AspS9I GGNCC 2 cut(s) 142, 373
AsuHPI GGTGA 3 cut(s) 310, 872, 943
AsuII TTCGAA 1 cut(s) 806
AvaI CYCGRG 2 cut(s) 182, 396
AvaII GGWCC 1 cut(s) 373
AvrII CCTAGG 1 cut(s) 883
BaeGI GKGCMC 1 cut(s) 715
BalI TGGCCA 1 cut(s) 554
BanI GGYRCC 1 cut(s) 879
BbrPI CACGTG 2 cut(s) 250, 331
BbsI GAAGAC 2 cut(s) 795, 1476
BbvI GCAGC 3 cut(s) 255, 1006, 1203
BccI CCATC 6 cut(s) 305, 452, 512, 973, 1280, 1483
BceAI ACGGC 1 cut(s) 336
BciT130I CCWGG 4 cut(s) 230, 308, 382, 1035
BciVI GTATCC 2 cut(s) 859, 1239
BclI TGATCA 1 cut(s) 496
BcoDI GTCTC 1 cut(s) 1357
BcuI ACTAGT 1 cut(s) 854
BfaI CTAG 4 cut(s) 663, 855, 884, 1283
BfmI CTRYAG 4 cut(s) 597, 633, 653, 1005
BfoI RGCGCY 3 cut(s) 167, 326, 883
BfuI GTATCC 2 cut(s) 859, 1239
BisI GCNGC 8 cut(s) 175, 234, 237, 269, 288, 336, 1020, 1217
BlnI CCTAGG 1 cut(s) 883
BlpI GCTNAGC 1 cut(s) 889
BlsI GCNGC 8 cut(s) 176, 235, 238, 270, 289, 337, 1021, 1218
BmcAI AGTACT 1 cut(s) 595
Bme1390I CCNGG 4 cut(s) 230, 308, 382, 1035
Bme18I GGWCC 1 cut(s) 373
BmeT110I CYCGRG 2 cut(s) 182, 396
BmgBI CACGTC 3 cut(s) 283, 785, 833
BmgT120I GGNCC 2 cut(s) 142, 373
BmiI GGNNCC 3 cut(s) 305, 756, 881
BmrFI CCNGG 4 cut(s) 230, 308, 382, 1035
BmsI GCATC 2 cut(s) 417, 998
BpiI GAAGAC 2 cut(s) 795, 1476
BplI GAGNNNNNCTC 2 cut(s) 188, 220
BpmI CTGGAG 1 cut(s) 1056
Bpu1102I GCTNAGC 1 cut(s) 889
Bpu14I TTCGAA 1 cut(s) 806
Bsa29I ATCGAT 1 cut(s) 1358
BsaAI YACGTR 2 cut(s) 250, 331
BsaBI GATNNNNATC 1 cut(s) 1271
BsaHI GRCGYC 1 cut(s) 880
BsaI GGTCTC 1 cut(s) 1357
BsaJI CCNNGG 2 cut(s) 27, 883
BsaWI WCCGGW 1 cut(s) 925
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 235, 334, 414, 1037
Bse1I ACTGG 1 cut(s) 591
Bse8I GATNNNNATC 1 cut(s) 1271
BseBI CCWGG 4 cut(s) 230, 308, 382, 1035
BseCI ATCGAT 1 cut(s) 1358
BseDI CCNNGG 2 cut(s) 27, 883
BseGI GGATG 6 cut(s) 101, 316, 463, 523, 625, 1245
BseJI GATNNNNATC 1 cut(s) 1271
BseLI CCNNNNNNNGG 5 cut(s) 232, 235, 334, 414, 1037
BseMII CTCAG 9 cut(s) 30, 161, 378, 785, 807, 903, 939, 1178, 1450
BseNI ACTGG 1 cut(s) 591
BseSI GKGCMC 1 cut(s) 715
BseXI GCAGC 3 cut(s) 255, 1006, 1203
Bsh1236I CGCG 2 cut(s) 208, 210
BshFI GGCC 4 cut(s) 144, 239, 554, 1121
BshNI GGYRCC 1 cut(s) 879
BshVI ATCGAT 1 cut(s) 1358
BsiHKCI CYCGRG 2 cut(s) 182, 396
BsiSI CCGG 1 cut(s) 926
BslFI GGGAC 1 cut(s) 1303
BslI CCNNNNNNNGG 5 cut(s) 232, 235, 334, 414, 1037
BsmAI GTCTC 1 cut(s) 1357
BsmFI GGGAC 1 cut(s) 1303
BsnI GGCC 4 cut(s) 144, 239, 554, 1121
Bso31I GGTCTC 1 cut(s) 1357
BsoBI CYCGRG 2 cut(s) 182, 396
Bsp119I TTCGAA 1 cut(s) 806
Bsp1286I GDGCHC 1 cut(s) 715
Bsp143I GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
Bsp1720I GCTNAGC 1 cut(s) 889
Bsp19I CCATGG 1 cut(s) 27
BspACI CCGC 8 cut(s) 175, 210, 221, 233, 236, 287, 335, 1231
BspANI GGCC 4 cut(s) 144, 239, 554, 1121
BspCNI CTCAG 9 cut(s) 29, 162, 379, 784, 806, 902, 940, 1179, 1449
BspDI ATCGAT 1 cut(s) 1358
BspFNI CGCG 2 cut(s) 208, 210
BspHI TCATGA 1 cut(s) 1152
BspLI GGNNCC 3 cut(s) 305, 756, 881
BspMAI CTGCAG 2 cut(s) 601, 657
BspPI GGATC 2 cut(s) 55, 220
BspT104I TTCGAA 1 cut(s) 806
BspT107I GGYRCC 1 cut(s) 879
BspTNI GGTCTC 1 cut(s) 1357
BsrBI CCGCTC 1 cut(s) 223
BsrI ACTGG 1 cut(s) 591
BssECI CCNNGG 2 cut(s) 27, 883
BssMI GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
BssNI GRCGYC 1 cut(s) 880
BssT1I CCWWGG 2 cut(s) 27, 883
Bst2UI CCWGG 4 cut(s) 230, 308, 382, 1035
Bst4CI ACNGT 2 cut(s) 1006, 1058
Bst6I CTCTTC 2 cut(s) 343, 959
BstACI GRCGYC 1 cut(s) 880
BstBAI YACGTR 2 cut(s) 250, 331
BstBI TTCGAA 1 cut(s) 806
BstC8I GCNNGC 1 cut(s) 179
BstDSI CCRYGG 1 cut(s) 27
BstEII GGTNACC 1 cut(s) 1076
BstF5I GGATG 6 cut(s) 101, 316, 463, 523, 625, 1245
BstFNI CGCG 2 cut(s) 208, 210
BstH2I RGCGCY 3 cut(s) 167, 326, 883
BstHHI GCGC 5 cut(s) 166, 210, 325, 882, 1289
BstKTI GATC 7 cut(s) 58, 63, 215, 499, 573, 1257, 1389
BstMAI GTCTC 1 cut(s) 1357
BstMBI GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
BstMWI GCNNNNNNNGC 4 cut(s) 284, 719, 1007, 1016
BstNI CCWGG 4 cut(s) 230, 308, 382, 1035
BstNSI RCATGY 2 cut(s) 733, 1318
BstPI GGTNACC 1 cut(s) 1076
BstSCI CCNGG 4 cut(s) 228, 306, 380, 1033
BstSFI CTRYAG 4 cut(s) 597, 633, 653, 1005
BstSLI GKGCMC 1 cut(s) 715
BstUI CGCG 2 cut(s) 208, 210
BstV1I GCAGC 3 cut(s) 255, 1006, 1203
BstV2I GAAGAC 2 cut(s) 795, 1476
BstXI CCANNNNNNTGG 1 cut(s) 199
Bsu15I ATCGAT 1 cut(s) 1358
BsuI GTATCC 2 cut(s) 859, 1239
BsuRI GGCC 4 cut(s) 144, 239, 554, 1121
BsuTUI ATCGAT 1 cut(s) 1358
BtgI CCRYGG 1 cut(s) 27
BtrI CACGTC 3 cut(s) 283, 785, 833
BtsCI GGATG 6 cut(s) 101, 316, 463, 523, 625, 1245
BtsI GCAGTG 1 cut(s) 606
BtsIMutI CAGTG 1 cut(s) 606
Cac8I GCNNGC 1 cut(s) 179
CciI TCATGA 1 cut(s) 1152
CfoI GCGC 5 cut(s) 166, 210, 325, 882, 1289
Cfr13I GGNCC 2 cut(s) 142, 373
ClaI ATCGAT 1 cut(s) 1358
CseI GACGC 1 cut(s) 1334
Csp6I GTAC 1 cut(s) 594
CviAII CATG 8 cut(s) 28, 679, 730, 746, 1117, 1153, 1315, 1374
CviQI GTAC 1 cut(s) 594
DinI GGCGCC 1 cut(s) 881
DpnI GATC 7 cut(s) 57, 62, 214, 498, 572, 1256, 1388
DpnII GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
EaeI YGGCCR 2 cut(s) 237, 552
Eam1104I CTCTTC 2 cut(s) 343, 959
EarI CTCTTC 2 cut(s) 343, 959
Eco130I CCWWGG 2 cut(s) 27, 883
Eco31I GGTCTC 1 cut(s) 1357
Eco32I GATATC 1 cut(s) 1362
Eco47I GGWCC 1 cut(s) 373
Eco47III AGCGCT 1 cut(s) 165
Eco72I CACGTG 2 cut(s) 250, 331
Eco88I CYCGRG 2 cut(s) 182, 396
Eco91I GGTNACC 1 cut(s) 1076
EcoO65I GGTNACC 1 cut(s) 1076
EcoRII CCWGG 4 cut(s) 228, 306, 380, 1033
EcoRV GATATC 1 cut(s) 1362
EcoT14I CCWWGG 2 cut(s) 27, 883
EcoT22I ATGCAT 1 cut(s) 432
EgeI GGCGCC 1 cut(s) 881
EheI GGCGCC 1 cut(s) 881
ErhI CCWWGG 2 cut(s) 27, 883
FaeI CATG 8 cut(s) 31, 682, 733, 749, 1120, 1156, 1318, 1377
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FaqI GGGAC 1 cut(s) 1303
FatI CATG 8 cut(s) 27, 678, 729, 745, 1116, 1152, 1314, 1373
FauI CCCGC 1 cut(s) 228
FbaI TGATCA 1 cut(s) 496
FblI GTMKAC 2 cut(s) 392, 1065
Fnu4HI GCNGC 8 cut(s) 175, 234, 237, 269, 288, 336, 1020, 1217
FokI GGATG 6 cut(s) 88, 323, 470, 530, 632, 1252
Fsp4HI GCNGC 8 cut(s) 175, 234, 237, 269, 288, 336, 1020, 1217
FspBI CTAG 4 cut(s) 663, 855, 884, 1283
GlaI GCGC 5 cut(s) 165, 209, 324, 881, 1288
GluI GCNGC 8 cut(s) 175, 234, 237, 269, 288, 336, 1020, 1217
GsuI CTGGAG 1 cut(s) 1056
HaeII RGCGCY 3 cut(s) 167, 326, 883
HaeIII GGCC 4 cut(s) 144, 239, 554, 1121
HapII CCGG 1 cut(s) 926
HgaI GACGC 1 cut(s) 1334
HhaI GCGC 5 cut(s) 166, 210, 325, 882, 1289
Hin1I GRCGYC 1 cut(s) 880
Hin1II CATG 8 cut(s) 31, 682, 733, 749, 1120, 1156, 1318, 1377
Hin6I GCGC 5 cut(s) 164, 208, 323, 880, 1287
HinP1I GCGC 5 cut(s) 164, 208, 323, 880, 1287
HincII GTYRAC 2 cut(s) 393, 405
HindII GTYRAC 2 cut(s) 393, 405
HinfI GANTC 9 cut(s) 203, 351, 389, 394, 658, 692, 914, 934, 971
HpaII CCGG 1 cut(s) 926
HphI GGTGA 3 cut(s) 310, 872, 943
Hpy166II GTNNAC 5 cut(s) 393, 405, 610, 863, 1066
Hpy188I TCNGA 8 cut(s) 19, 60, 112, 759, 774, 939, 1188, 1439
Hpy188III TCNNGA 2 cut(s) 259, 1153
Hpy8I GTNNAC 5 cut(s) 393, 405, 610, 863, 1066
HpyAV CCTTC 5 cut(s) 26, 508, 667, 711, 1021
HpyCH4III ACNGT 2 cut(s) 1006, 1058
HpyCH4IV ACGT 9 cut(s) 249, 282, 330, 784, 832, 839, 1262, 1338, 1417
HpyCH4V TGCA 7 cut(s) 430, 541, 599, 655, 836, 1001, 1022
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 719, 1007, 1016
HpySE526I ACGT 9 cut(s) 249, 282, 330, 784, 832, 839, 1262, 1338, 1417
Hsp92I GRCGYC 1 cut(s) 880
Hsp92II CATG 8 cut(s) 31, 682, 733, 749, 1120, 1156, 1318, 1377
HspAI GCGC 5 cut(s) 164, 208, 323, 880, 1287
KasI GGCGCC 1 cut(s) 879
Ksp22I TGATCA 1 cut(s) 496
Kzo9I GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
LmnI GCTCC 3 cut(s) 228, 265, 330
Lsp1109I GCAGC 3 cut(s) 255, 1006, 1203
LweI GCATC 2 cut(s) 417, 998
MaeI CTAG 4 cut(s) 663, 855, 884, 1283
MaeII ACGT 9 cut(s) 249, 282, 330, 784, 832, 839, 1262, 1338, 1417
MaeIII GTNAC 4 cut(s) 527, 1076, 1258, 1310
MalI GATC 7 cut(s) 57, 62, 214, 498, 572, 1256, 1388
MbiI CCGCTC 1 cut(s) 223
MboI GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
MboII GAAGA 9 cut(s) 19, 55, 360, 795, 976, 1190, 1193, 1481, 1505
MfeI CAATTG 2 cut(s) 738, 1485
MhlI GDGCHC 1 cut(s) 715
MlsI TGGCCA 1 cut(s) 554
MluCI AATT 6 cut(s) 508, 738, 1194, 1423, 1485, 1496
MluNI TGGCCA 1 cut(s) 554
Mly113I GGCGCC 1 cut(s) 880
MlyI GAGTC 5 cut(s) 197, 360, 388, 398, 667
MmeI TCCRAC 3 cut(s) 88, 180, 435
Mox20I TGGCCA 1 cut(s) 554
Mph1103I ATGCAT 1 cut(s) 432
MroXI GAANNNNTTC 1 cut(s) 753
MscI TGGCCA 1 cut(s) 554
MseI TTAA 3 cut(s) 342, 464, 1161
MslI CAYNNNNRTG 2 cut(s) 435, 1378
Msp20I TGGCCA 1 cut(s) 554
MspI CCGG 1 cut(s) 926
MspR9I CCNGG 4 cut(s) 230, 308, 382, 1035
MunI CAATTG 2 cut(s) 738, 1485
MvaI CCWGG 4 cut(s) 230, 308, 382, 1035
MvnI CGCG 2 cut(s) 208, 210
MwoI GCNNNNNNNGC 4 cut(s) 284, 719, 1007, 1016
NarI GGCGCC 1 cut(s) 880
NcoI CCATGG 1 cut(s) 27
NdeII GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
NlaIII CATG 8 cut(s) 31, 682, 733, 749, 1120, 1156, 1318, 1377
NlaIV GGNNCC 3 cut(s) 305, 756, 881
NmuCI GTSAC 1 cut(s) 1310
NsiI ATGCAT 1 cut(s) 432
NspI RCATGY 2 cut(s) 733, 1318
NspV TTCGAA 1 cut(s) 806
PagI TCATGA 1 cut(s) 1152
PciI ACATGT 1 cut(s) 1314
PcsI WCGNNNNNNNCGW 3 cut(s) 212, 255, 398
PdmI GAANNNNTTC 1 cut(s) 753
PfeI GAWTC 4 cut(s) 692, 914, 934, 971
PflFI GACNNNGTC 1 cut(s) 388
PkrI GCNGC 8 cut(s) 176, 235, 238, 270, 289, 337, 1021, 1218
PleI GAGTC 5 cut(s) 197, 359, 388, 397, 666
PluTI GGCGCC 1 cut(s) 883
PmaCI CACGTG 2 cut(s) 250, 331
PmlI CACGTG 2 cut(s) 250, 331
PpsI GAGTC 5 cut(s) 197, 359, 388, 397, 666
Ppu21I YACGTR 2 cut(s) 250, 331
PscI ACATGT 1 cut(s) 1314
Psp6I CCWGG 4 cut(s) 228, 306, 380, 1033
PspCI CACGTG 2 cut(s) 250, 331
PspEI GGTNACC 1 cut(s) 1076
PspGI CCWGG 4 cut(s) 228, 306, 380, 1033
PspN4I GGNNCC 3 cut(s) 305, 756, 881
PspPI GGNCC 2 cut(s) 142, 373
PstI CTGCAG 2 cut(s) 601, 657
PsyI GACNNNGTC 1 cut(s) 388
RsaI GTAC 1 cut(s) 595
RsaNI GTAC 1 cut(s) 594
RseI CAYNNNNRTG 2 cut(s) 435, 1378
SalI GTCGAC 1 cut(s) 391
SaqAI TTAA 3 cut(s) 342, 464, 1161
SatI GCNGC 8 cut(s) 175, 234, 237, 269, 288, 336, 1020, 1217
Sau3AI GATC 7 cut(s) 55, 60, 212, 496, 570, 1254, 1386
Sau96I GGNCC 2 cut(s) 142, 373
ScaI AGTACT 1 cut(s) 595
SchI GAGTC 5 cut(s) 197, 360, 388, 398, 667
ScrFI CCNGG 4 cut(s) 230, 308, 382, 1035
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 2 cut(s) 417, 998
SfcI CTRYAG 4 cut(s) 597, 633, 653, 1005
SfoI GGCGCC 1 cut(s) 881
SfuI TTCGAA 1 cut(s) 806
SinI GGWCC 1 cut(s) 373
SmiMI CAYNNNNRTG 2 cut(s) 435, 1378
SpeI ACTAGT 1 cut(s) 854
Sse9I AATT 6 cut(s) 508, 738, 1194, 1423, 1485, 1496
SsiI CCGC 8 cut(s) 175, 210, 221, 233, 236, 287, 335, 1231
SspDI GGCGCC 1 cut(s) 879
SspMI CTAG 4 cut(s) 663, 855, 884, 1283
StyD4I CCNGG 4 cut(s) 228, 306, 380, 1033
StyI CCWWGG 2 cut(s) 27, 883
TaaI ACNGT 2 cut(s) 1006, 1058
TaiI ACGT 9 cut(s) 252, 285, 333, 787, 835, 842, 1265, 1341, 1420
TaqI TCGA 5 cut(s) 215, 354, 392, 806, 1358
TaqII GACCGA 1 cut(s) 422
TasI AATT 6 cut(s) 508, 738, 1194, 1423, 1485, 1496
TatI WGTACW 1 cut(s) 593
TauI GCSGC 5 cut(s) 177, 236, 239, 290, 338
TfiI GAWTC 4 cut(s) 692, 914, 934, 971
Tru1I TTAA 3 cut(s) 342, 464, 1161
Tru9I TTAA 3 cut(s) 342, 464, 1161
TscAI CASTG 1 cut(s) 606
TseFI GTSAC 1 cut(s) 1310
TseI GCWGC 3 cut(s) 268, 1019, 1216
Tsp45I GTSAC 1 cut(s) 1310
TspDTI ATGAA 5 cut(s) 90, 762, 963, 1141, 1506
TspGWI ACGGA 1 cut(s) 1298
TspRI CASTG 1 cut(s) 606
Tth111I GACNNNGTC 1 cut(s) 388
VpaK11BI GGWCC 1 cut(s) 373
XapI RAATTY 3 cut(s) 508, 1423, 1496
XceI RCATGY 2 cut(s) 733, 1318
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XmaJI CCTAGG 1 cut(s) 883
XmiI GTMKAC 2 cut(s) 392, 1065
XmnI GAANNNNTTC 1 cut(s) 753
XspI CTAG 4 cut(s) 663, 855, 884, 1283
ZrmI AGTACT 1 cut(s) 595
Zsp2I ATGCAT 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.