Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002270.1

Orthogroup ID

OG0003405

Physical Location & Seq

Genomic Coordinates Forward (+)

174452 .. 176836

Gene Structure 2385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002270.1_g000045.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

atggcagccttacacattaagcttttttgcatccttcctctcctcttcgcccttggcatcaatgcacaatggcgagggcttccttttatccccaatccgttagtttcacaccatggattgggttttaatcttgaccccagcaacgggggccaatttcagttatttgaccccaagcccgtcactttcaaagcagccggcgataaacctaaacccaacgccgtgggtgaaccccaacccgacgcaggggccgaacttccctactttgaccccaagcccgtcactttcaaagcagccggcgataaacctaaacccaacgccatcgccgggggtgaaccccaacccgtcgccgggggtgaaccccaacccgacgcagggggtaaacccaacgtcgggggtatacccaaacgagcggtcattaaagccgaagatgctaatgctgttcccaacgcacaaccacagccgaacttccctattggcaataacccgggggcgtgggcacttgtttccaatgacgccggtgtgtctgccatgcatctaaatgtgcttcccaacaacaaggccataatgtacgatgcctcggatttccatatatcgaacatcaaattgcccaacaatgaatgccttccctggaacaataataagggcgagacaggaaacgattgttttgctcatgcagttgaatatgatcttgacaaaaacacagttagaccactcaaggttcagtttgatgcatggtgctcatcgggagggattttgcccgatggtaggttcgtcagcaccggtggttgggtgaacggatatagaagcgctagatatataaccgcatgcaacgacggcaaatgcgacttcaaagagtaccaaaacgcatttgcagaaaatagatggtatgcaactcagataacgctagcagacggtagggtgattgtggttggtggccggaaagcatacagcatcgagtacgtgccaccagagggacaagaaaacaagcaatccatcttcctgcctttccttgacgagaccaccgacatggacgagaacaatctctacccgttcgtgcaccaatctaccgatggcaacgtcttcatctttgccaacgaccgctccgtcctcctcaatcccaaaaccaacaaagtcatcaaggagttccccaaactcgacggcggatcccgaaactacccggcctccggcatgtcggcactgctccccatcgagctcaatgagcagaaccccccggtcatccctgtcgacgtcctcgtctgcggtggcaataagcgcgacgctttcaaaatgtccgcacagaaaccaccagtcttcatccctgccttggacgactgcggacgcctccggatcaccgatcctaatccggtctgggaaaaggaggtcatgccctcaagacgtgtcatgggagacatgctaaaccttcccacaggtgagctcttgatgataaacggtgcgatggctggtgcctcagcttggtggcaagctgaagaacccaactttacccctgtgatgtacaaccccaaattgcccaatggacaacggttcgtcaagatggcaccgacagctattgcaagaatgtaccactccacctcggcagtgctccctaacggtaaaatcctcgtggcaggcagtaatactaacccgggctatgacttcaaggccaagtacccaactgaggtacgggtggagaccttcaccccaccttacatggataaggctttggacatccacaggccggaaatcaacgcccaggcctccgacaacaagcttaagtacggatcaccgttcggggtccagttcaagctgaacgagcaagacaagcctacaaaggctgacatcaaggtcaccgtgtacgctgttcctttcacaacacatggctactccatgaaccagaggcttgttgttttggcgaacactgagctcaaggcagagggagctggcttatatagtgtcacggcgttggccccaccaaccggagcggtggcgccaccagggtcctacctgctgaatgtggttcaccgcggagtgccgagcacgggaatgtgggtgacgattaaccagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1929 Glyoxal_oxid_N

Protein Analysis

687

Amino Acids

74.68

Weight (kDa)

6.62

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003405)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67290 AT5G19580
fragaria_vesca	FvH4_1g05670 FvH4_2g35740
malus_domestica	MD02G1057700.v1.1 MD14G1235700.v1.1 MD15G1094900.v1.1 MD15G1095000.v1.1 MD15G1192100.v1.1
prunus_persica	Prupe.1G450000_v2.0.a1 Prupe.7G225100_v2.0.a1
pyrus_communis	pycom15g08750 pycom15g17200
rosa_chinensis	RchiOBHm_Chr2g0091311 RchiOBHm_Chr6g0306041
rosa_laevigata	RLG00000010829 RLG00000016210 RLG00000032216
rosa_multiflora	Rmu_sc0002270.1_g000045 Rmu_sc0025077.1_g000001
rosa_roxburghii	Rroxscaffold_2G00150220 Rroxscaffold_7G00162100
rosa_rugosa	Rorug02G0016200 Rorug06G0346600
rosa_samantha	Rh2AG061300 Rh2BG060400 Rh2CG062300 Rh2DG060900 Rh2DG061000 Rh6AG458600 Rh6BG442300 Rh6CG473000 Rh6DG459200 Rh7BG304600
rosa_wichuraiana	Rw2G004860 Rw6G039980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1103, 1253, 1841
AatII	GACGTC	1 cut(s)	1251
Acc36I	ACCTGC	1 cut(s)	2010
AccB1I	GGYRCC	3 cut(s)	1463, 1555, 1984
AccB7I	CCANNNNNTGG	1 cut(s)	118
AccBSI	CCGCTC	3 cut(s)	410, 1101, 1979
AccI	GTMKAC	2 cut(s)	397, 1245
AccII	CGCG	2 cut(s)	1275, 2022
AccIII	TCCGGA	1 cut(s)	1344
AclWI	GGATC	5 cut(s)	1158, 1171, 1349, 1355, 1786
AcoI	YGGCCR	1 cut(s)	934
AcuI	CTGAAG	1 cut(s)	1506
AcyI	GRCGYC	4 cut(s)	513, 1248, 1339, 1985
AfaI	GTAC	9 cut(s)	569, 857, 959, 1514, 1580, 1667, 1680, 1775, 1853
AfeI	AGCGCT	1 cut(s)	808
AflII	CTTAAG	1 cut(s)	1769
AflIII	ACRYGT	1 cut(s)	1396
AgeI	ACCGGT	1 cut(s)	779
AgsI	TTSAA	7 cut(s)	187, 286, 680, 850, 1285, 1657, 1801
AjiI	CACGTC	1 cut(s)	1397
AjnI	CCWGG	3 cut(s)	626, 1749, 1990
Alw21I	GWGCWC	7 cut(s)	740, 1059, 1215, 1437, 1602, 1923, 2036
Alw26I	GTCTC	4 cut(s)	641, 1010, 1401, 1682
Alw44I	GTGCAC	1 cut(s)	1055
AlwI	GGATC	5 cut(s)	1158, 1171, 1349, 1355, 1786
Ama87I	CYCGRG	2 cut(s)	484, 1642
Aor13HI	TCCGGA	1 cut(s)	1344
Aor51HI	AGCGCT	1 cut(s)	808
AoxI	GGCC	9 cut(s)	148, 246, 558, 934, 1179, 1659, 1733, 1752, 1962
ApaLI	GTGCAC	1 cut(s)	1055
ApeKI	GCWGC	3 cut(s)	5, 191, 290
ArsI	GACNNNNNNTTYG	2 cut(s)	396, 428
AsiGI	ACCGGT	1 cut(s)	779
Asp700I	GAANNNNTTC	1 cut(s)	621
AspLEI	GCGC	3 cut(s)	809, 1275, 1987
AspS9I	GGNCC	5 cut(s)	148, 246, 1792, 1963, 1995
AsuC2I	CCSGG	8 cut(s)	325, 349, 485, 486, 1178, 1232, 1643, 1644
AsuNHI	GCTAGC	1 cut(s)	904
AvaI	CYCGRG	2 cut(s)	484, 1642
AvaII	GGWCC	2 cut(s)	1792, 1995
BaeGI	GKGCMC	2 cut(s)	499, 1059
BamHI	GGATCC	1 cut(s)	1163
BanI	GGYRCC	3 cut(s)	1463, 1555, 1984
BanII	GRGCYC	3 cut(s)	1215, 1437, 1923
BauI	CACGAG	1 cut(s)	1619
BbsI	GAAGAC	2 cut(s)	1072, 1303
Bbv12I	GWGCWC	7 cut(s)	740, 1059, 1215, 1437, 1602, 1923, 2036
BbvCI	CCTCAGC	1 cut(s)	1468
BbvI	GCAGC	3 cut(s)	17, 203, 302
BccI	CCATC	8 cut(s)	326, 755, 876, 1001, 1064, 1214, 1450, 1546
BceAI	ACGGC	4 cut(s)	203, 850, 1174, 1971
BcgI	CGANNNNNNTGC	2 cut(s)	647, 681
BciT130I	CCWGG	3 cut(s)	628, 1751, 1992
BcnI	CCSGG	8 cut(s)	325, 349, 485, 486, 1178, 1232, 1643, 1644
BcoDI	GTCTC	4 cut(s)	641, 1010, 1401, 1682
BfaI	CTAG	2 cut(s)	810, 905
BfoI	RGCGCY	2 cut(s)	810, 1988
BfrI	CTTAAG	1 cut(s)	1769
BfuAI	ACCTGC	1 cut(s)	2010
BisI	GCNGC	3 cut(s)	6, 192, 291
BlsI	GCNGC	3 cut(s)	7, 193, 292
Bme18I	GGWCC	2 cut(s)	1792, 1995
BmeT110I	CYCGRG	2 cut(s)	484, 1642
BmgBI	CACGTC	1 cut(s)	1397
BmgT120I	GGNCC	5 cut(s)	148, 246, 1792, 1963, 1995
BmiI	GGNNCC	9 cut(s)	149, 247, 1165, 1465, 1557, 1793, 1965, 1986, 1996
BmsI	GCATC	7 cut(s)	39, 66, 418, 541, 562, 718, 960
BmtI	GCTAGC	1 cut(s)	908
BpiI	GAAGAC	2 cut(s)	1072, 1303
Bpu10I	CCTNAGC	1 cut(s)	1468
BpuEI	CTTGAG	3 cut(s)	698, 1375, 1907
BpuMI	CCSGG	8 cut(s)	325, 349, 485, 486, 1178, 1232, 1643, 1644
BsaAI	YACGTR	1 cut(s)	961
BsaBI	GATNNNNATC	1 cut(s)	1359
BsaHI	GRCGYC	4 cut(s)	513, 1248, 1339, 1985
BsaI	GGTCTC	2 cut(s)	1010, 1682
BsaWI	WCCGGW	4 cut(s)	779, 1344, 1363, 1973
BsaXI	ACNNNNNCTCC	4 cut(s)	1085, 1115, 1166, 1196
Bse118I	RCCGGY	4 cut(s)	194, 293, 515, 779
Bse1I	ACTGG	3 cut(s)	1307, 1795, 2059
Bse8I	GATNNNNATC	1 cut(s)	1359
BseAI	TCCGGA	1 cut(s)	1344
BseBI	CCWGG	3 cut(s)	628, 1751, 1992
BseGI	GGATG	4 cut(s)	30, 1236, 1314, 1725
BseJI	GATNNNNATC	1 cut(s)	1359
BseMII	CTCAG	4 cut(s)	908, 1482, 1665, 1908
BseNI	ACTGG	3 cut(s)	1307, 1795, 2059
BseRI	GAGGAG	2 cut(s)	32, 1100
BseSI	GKGCMC	2 cut(s)	499, 1059
BseXI	GCAGC	3 cut(s)	17, 203, 302
BseYI	CCCAGC	1 cut(s)	137
Bsh1236I	CGCG	2 cut(s)	1275, 2022
Bsh1285I	CGRYCG	1 cut(s)	1099
BshFI	GGCC	9 cut(s)	150, 248, 560, 936, 1181, 1661, 1735, 1754, 1964
BshNI	GGYRCC	3 cut(s)	1463, 1555, 1984
BshTI	ACCGGT	1 cut(s)	779
BsiEI	CGRYCG	1 cut(s)	1099
BsiHKAI	GWGCWC	7 cut(s)	740, 1059, 1215, 1437, 1602, 1923, 2036
BsiHKCI	CYCGRG	2 cut(s)	484, 1642
BslFI	GGGAC	1 cut(s)	987
BsmAI	GTCTC	4 cut(s)	641, 1010, 1401, 1682
BsmFI	GGGAC	1 cut(s)	987
BsmI	GAATGC	1 cut(s)	623
BsnI	GGCC	9 cut(s)	150, 248, 560, 936, 1181, 1661, 1735, 1754, 1964
Bso31I	GGTCTC	2 cut(s)	1010, 1682
BsoBI	CYCGRG	2 cut(s)	484, 1642
Bsp1286I	GDGCHC	8 cut(s)	499, 740, 1059, 1215, 1437, 1602, 1923, 2036
Bsp13I	TCCGGA	1 cut(s)	1344
Bsp1407I	TGTACA	1 cut(s)	1512
Bsp143I	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
Bsp19I	CCATGG	1 cut(s)	112
BspANI	GGCC	9 cut(s)	150, 248, 560, 936, 1181, 1661, 1735, 1754, 1964
BspCNI	CTCAG	4 cut(s)	907, 1481, 1666, 1909
BspEI	TCCGGA	1 cut(s)	1344
BspFNI	CGCG	2 cut(s)	1275, 2022
BspLI	GGNNCC	9 cut(s)	149, 247, 1165, 1465, 1557, 1793, 1965, 1986, 1996
BspMI	ACCTGC	1 cut(s)	2010
BspOI	GCTAGC	1 cut(s)	908
BspPI	GGATC	5 cut(s)	1158, 1171, 1349, 1355, 1786
BspT107I	GGYRCC	3 cut(s)	1463, 1555, 1984
BspTI	CTTAAG	1 cut(s)	1769
BspTNI	GGTCTC	2 cut(s)	1010, 1682
BsrBI	CCGCTC	3 cut(s)	410, 1101, 1979
BsrFI	RCCGGY	4 cut(s)	194, 293, 515, 779
BsrGI	TGTACA	1 cut(s)	1512
BsrI	ACTGG	3 cut(s)	1307, 1795, 2059
BssAI	RCCGGY	4 cut(s)	194, 293, 515, 779
BssMI	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
BssNAI	GTATAC	1 cut(s)	398
BssNI	GRCGYC	4 cut(s)	513, 1248, 1339, 1985
BssSI	CACGAG	1 cut(s)	1619
BssT1I	CCWWGG	3 cut(s)	52, 112, 1323
Bst1107I	GTATAC	1 cut(s)	398
Bst2BI	CACGAG	1 cut(s)	1619
Bst2UI	CCWGG	3 cut(s)	628, 1751, 1992
Bst4CI	ACNGT	7 cut(s)	703, 914, 1451, 1542, 1610, 1785, 1849
Bst6I	CTCTTC	1 cut(s)	50
BstACI	GRCGYC	4 cut(s)	513, 1248, 1339, 1985
BstAFI	CTTAAG	1 cut(s)	1769
BstAUI	TGTACA	1 cut(s)	1512
BstBAI	YACGTR	1 cut(s)	961
BstC8I	GCNNGC	7 cut(s)	196, 295, 826, 906, 1482, 1627, 1939
BstDEI	CTNAG	4 cut(s)	894, 1468, 1674, 1917
BstDSI	CCRYGG	3 cut(s)	112, 219, 2020
BstEII	GGTNACC	1 cut(s)	1843
BstF5I	GGATG	4 cut(s)	30, 1236, 1314, 1725
BstFNI	CGCG	2 cut(s)	1275, 2022
BstH2I	RGCGCY	2 cut(s)	810, 1988
BstHHI	GCGC	3 cut(s)	809, 1275, 1987
BstKTI	GATC	5 cut(s)	688, 1166, 1350, 1357, 1781
BstMAI	GTCTC	4 cut(s)	641, 1010, 1401, 1682
BstMBI	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
BstMCI	CGRYCG	1 cut(s)	1099
BstMWI	GCNNNNNNNGC	9 cut(s)	147, 428, 834, 1219, 1272, 1562, 1810, 1819, 1934
BstNI	CCWGG	3 cut(s)	628, 1751, 1992
BstNSI	RCATGY	3 cut(s)	828, 1192, 1414
BstPI	GGTNACC	1 cut(s)	1843
BstSLI	GKGCMC	2 cut(s)	499, 1059
BstUI	CGCG	2 cut(s)	1275, 2022
BstV1I	GCAGC	3 cut(s)	17, 203, 302
BstV2I	GAAGAC	2 cut(s)	1072, 1303
BstX2I	RGATCY	1 cut(s)	1163
BstXI	CCANNNNNNTGG	2 cut(s)	220, 1027
BstYI	RGATCY	1 cut(s)	1163
BstZ17I	GTATAC	1 cut(s)	398
BsuRI	GGCC	9 cut(s)	150, 248, 560, 936, 1181, 1661, 1735, 1754, 1964
BtgI	CCRYGG	3 cut(s)	112, 219, 2020
BtgZI	GCGATG	2 cut(s)	304, 1469
BtrI	CACGTC	1 cut(s)	1397
BtsCI	GGATG	4 cut(s)	30, 1236, 1314, 1725
BtsI	GCAGTG	2 cut(s)	1196, 1602
BtsIMutI	CAGTG	3 cut(s)	1196, 1602, 1914
BveI	ACCTGC	1 cut(s)	2010
Cac8I	GCNNGC	7 cut(s)	196, 295, 826, 906, 1482, 1627, 1939
CfoI	GCGC	3 cut(s)	809, 1275, 1987
Cfr10I	RCCGGY	4 cut(s)	194, 293, 515, 779
Cfr13I	GGNCC	5 cut(s)	148, 246, 1792, 1963, 1995
Cfr42I	CCGCGG	1 cut(s)	2023
Cfr9I	CCCGGG	2 cut(s)	484, 1642
CseI	GACGC	5 cut(s)	248, 377, 521, 1286, 1347
Csp6I	GTAC	9 cut(s)	568, 856, 958, 1513, 1579, 1666, 1679, 1774, 1852
CspAI	ACCGGT	1 cut(s)	779
CviQI	GTAC	9 cut(s)	568, 856, 958, 1513, 1579, 1666, 1679, 1774, 1852
DdeI	CTNAG	4 cut(s)	894, 1468, 1674, 1917
DinI	GGCGCC	1 cut(s)	1986
DpnI	GATC	5 cut(s)	687, 1165, 1349, 1356, 1780
DpnII	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
DrdI	GACNNNNNNGTC	3 cut(s)	1103, 1253, 1841
DseDI	GACNNNNNNGTC	3 cut(s)	1103, 1253, 1841
EaeI	YGGCCR	1 cut(s)	934
Eam1104I	CTCTTC	1 cut(s)	50
EarI	CTCTTC	1 cut(s)	50
EciI	GGCGGA	1 cut(s)	1176
Ecl136II	GAGCTC	3 cut(s)	1213, 1435, 1921
Eco130I	CCWWGG	3 cut(s)	52, 112, 1323
Eco147I	AGGCCT	1 cut(s)	1754
Eco24I	GRGCYC	3 cut(s)	1215, 1437, 1923
Eco31I	GGTCTC	2 cut(s)	1010, 1682
Eco47I	GGWCC	2 cut(s)	1792, 1995
Eco47III	AGCGCT	1 cut(s)	808
Eco53kI	GAGCTC	3 cut(s)	1213, 1435, 1921
Eco57I	CTGAAG	1 cut(s)	1506
Eco88I	CYCGRG	2 cut(s)	484, 1642
Eco91I	GGTNACC	1 cut(s)	1843
EcoICRI	GAGCTC	3 cut(s)	1213, 1435, 1921
EcoO109I	RGGNCCY	1 cut(s)	1995
EcoO65I	GGTNACC	1 cut(s)	1843
EcoRII	CCWGG	3 cut(s)	626, 1749, 1990
EcoT14I	CCWWGG	3 cut(s)	52, 112, 1323
EcoT22I	ATGCAT	2 cut(s)	534, 733
EcoT38I	GRGCYC	3 cut(s)	1215, 1437, 1923
EgeI	GGCGCC	1 cut(s)	1986
EheI	GGCGCC	1 cut(s)	1986
ErhI	CCWWGG	3 cut(s)	52, 112, 1323
FaqI	GGGAC	1 cut(s)	987
FblI	GTMKAC	2 cut(s)	397, 1245
Fnu4HI	GCNGC	3 cut(s)	6, 192, 291
FokI	GGATG	4 cut(s)	17, 1223, 1301, 1712
FriOI	GRGCYC	3 cut(s)	1215, 1437, 1923
Fsp4HI	GCNGC	3 cut(s)	6, 192, 291
FspBI	CTAG	2 cut(s)	810, 905
GlaI	GCGC	3 cut(s)	808, 1274, 1986
GluI	GCNGC	3 cut(s)	6, 192, 291
GsaI	CCCAGC	1 cut(s)	141
HaeII	RGCGCY	2 cut(s)	810, 1988
HaeIII	GGCC	9 cut(s)	150, 248, 560, 936, 1181, 1661, 1735, 1754, 1964
HgaI	GACGC	5 cut(s)	248, 377, 521, 1286, 1347
HhaI	GCGC	3 cut(s)	809, 1275, 1987
Hin1I	GRCGYC	4 cut(s)	513, 1248, 1339, 1985
Hin6I	GCGC	3 cut(s)	807, 1273, 1985
HinP1I	GCGC	3 cut(s)	807, 1273, 1985
HincII	GTYRAC	1 cut(s)	1246
HindII	GTYRAC	1 cut(s)	1246
HindIII	AAGCTT	2 cut(s)	20, 1766
Hpy188I	TCNGA	3 cut(s)	580, 897, 1759
Hpy188III	TCNNGA	8 cut(s)	131, 689, 744, 1167, 1345, 1392, 1438, 1549
Hpy99I	CGWCG	8 cut(s)	242, 347, 371, 392, 836, 1160, 1250, 1280
HpyAV	CCTTC	4 cut(s)	44, 632, 1430, 1702
HpyCH4III	ACNGT	7 cut(s)	703, 914, 1451, 1542, 1610, 1785, 1849
HpyCH4IV	ACGT	5 cut(s)	387, 960, 1077, 1248, 1396
HpyF10VI	GCNNNNNNNGC	9 cut(s)	147, 428, 834, 1219, 1272, 1562, 1810, 1819, 1934
HpyF3I	CTNAG	4 cut(s)	894, 1468, 1674, 1917
HpySE526I	ACGT	5 cut(s)	387, 960, 1077, 1248, 1396
Hsp92I	GRCGYC	4 cut(s)	513, 1248, 1339, 1985
HspAI	GCGC	3 cut(s)	807, 1273, 1985
KasI	GGCGCC	1 cut(s)	1984
Kpn2I	TCCGGA	1 cut(s)	1344
KroI	GCCGGC	2 cut(s)	194, 293
KroNI	GCCGGC	2 cut(s)	196, 295
KspI	CCGCGG	1 cut(s)	2023
Kzo9I	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
LmnI	GCTCC	5 cut(s)	1106, 1206, 1605, 1934, 1976
Lsp1109I	GCAGC	3 cut(s)	17, 203, 302
LweI	GCATC	7 cut(s)	39, 66, 418, 541, 562, 718, 960
MaeI	CTAG	2 cut(s)	810, 905
MaeII	ACGT	5 cut(s)	387, 960, 1077, 1248, 1396
MaeIII	GTNAC	5 cut(s)	178, 277, 1843, 1951, 2047
MalI	GATC	5 cut(s)	687, 1165, 1349, 1356, 1780
MbiI	CCGCTC	3 cut(s)	410, 1101, 1979
MboI	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
MboII	GAAGA	6 cut(s)	37, 437, 988, 1072, 1303, 1499
MflI	RGATCY	1 cut(s)	1163
MhlI	GDGCHC	8 cut(s)	499, 740, 1059, 1215, 1437, 1602, 1923, 2036
MluCI	AATT	3 cut(s)	152, 602, 1523
Mly113I	GGCGCC	1 cut(s)	1985
MmeI	TCCRAC	1 cut(s)	1782
Mph1103I	ATGCAT	2 cut(s)	534, 733
MroI	TCCGGA	1 cut(s)	1344
MroNI	GCCGGC	2 cut(s)	194, 293
MroXI	GAANNNNTTC	1 cut(s)	621
MseI	TTAA	5 cut(s)	18, 126, 417, 1770, 2055
MslI	CAYNNNNRTG	3 cut(s)	537, 1025, 2039
MspA1I	CMGCKG	1 cut(s)	2022
MspCI	CTTAAG	1 cut(s)	1769
Mva1269I	GAATGC	1 cut(s)	623
MvaI	CCWGG	3 cut(s)	628, 1751, 1992
MvnI	CGCG	2 cut(s)	1275, 2022
MwoI	GCNNNNNNNGC	9 cut(s)	147, 428, 834, 1219, 1272, 1562, 1810, 1819, 1934
NaeI	GCCGGC	2 cut(s)	196, 295
NarI	GGCGCC	1 cut(s)	1985
NciI	CCSGG	8 cut(s)	325, 349, 485, 486, 1178, 1232, 1643, 1644
NcoI	CCATGG	1 cut(s)	112
NdeII	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
NgoMIV	GCCGGC	2 cut(s)	194, 293
NheI	GCTAGC	1 cut(s)	904
NlaIV	GGNNCC	9 cut(s)	149, 247, 1165, 1465, 1557, 1793, 1965, 1986, 1996
NmeAIII	GCCGAG	2 cut(s)	1571, 2055
NmuCI	GTSAC	5 cut(s)	178, 277, 1843, 1951, 2047
NsiI	ATGCAT	2 cut(s)	534, 733
NspI	RCATGY	3 cut(s)	828, 1192, 1414
PaeI	GCATGC	1 cut(s)	828
PceI	AGGCCT	1 cut(s)	1754
PcsI	WCGNNNNNNNCGW	5 cut(s)	246, 840, 1020, 1101, 1251
PctI	GAATGC	1 cut(s)	623
PdiI	GCCGGC	2 cut(s)	196, 295
PdmI	GAANNNNTTC	1 cut(s)	621
PflMI	CCANNNNNTGG	1 cut(s)	118
PinAI	ACCGGT	1 cut(s)	779
PkrI	GCNGC	3 cut(s)	7, 193, 292
PluTI	GGCGCC	1 cut(s)	1988
Ppu21I	YACGTR	1 cut(s)	961
PpuMI	RGGWCCY	1 cut(s)	1995
Psp124BI	GAGCTC	3 cut(s)	1215, 1437, 1923
Psp5II	RGGWCCY	1 cut(s)	1995
Psp6I	CCWGG	3 cut(s)	626, 1749, 1990
PspEI	GGTNACC	1 cut(s)	1843
PspFI	CCCAGC	1 cut(s)	137
PspGI	CCWGG	3 cut(s)	626, 1749, 1990
PspN4I	GGNNCC	9 cut(s)	149, 247, 1165, 1465, 1557, 1793, 1965, 1986, 1996
PspPI	GGNCC	5 cut(s)	148, 246, 1792, 1963, 1995
PspPPI	RGGWCCY	1 cut(s)	1995
PsrI	GAACNNNNNNTAC	2 cut(s)	1028, 1060
PsuI	RGATCY	1 cut(s)	1163
RsaI	GTAC	9 cut(s)	569, 857, 959, 1514, 1580, 1667, 1680, 1775, 1853
RsaNI	GTAC	9 cut(s)	568, 856, 958, 1513, 1579, 1666, 1679, 1774, 1852
RseI	CAYNNNNRTG	3 cut(s)	537, 1025, 2039
SacI	GAGCTC	3 cut(s)	1215, 1437, 1923
SacII	CCGCGG	1 cut(s)	2023
SalI	GTCGAC	1 cut(s)	1244
SaqAI	TTAA	5 cut(s)	18, 126, 417, 1770, 2055
SatI	GCNGC	3 cut(s)	6, 192, 291
Sau3AI	GATC	5 cut(s)	685, 1163, 1347, 1354, 1778
Sau96I	GGNCC	5 cut(s)	148, 246, 1792, 1963, 1995
SduI	GDGCHC	8 cut(s)	499, 740, 1059, 1215, 1437, 1602, 1923, 2036
SfaNI	GCATC	7 cut(s)	39, 66, 418, 541, 562, 718, 960
SfoI	GGCGCC	1 cut(s)	1986
Sfr303I	CCGCGG	1 cut(s)	2023
SgrAI	CRCCGGYG	2 cut(s)	515, 779
SgrBI	CCGCGG	1 cut(s)	2023
SinI	GGWCC	2 cut(s)	1792, 1995
SmaI	CCCGGG	2 cut(s)	486, 1644
SmiMI	CAYNNNNRTG	3 cut(s)	537, 1025, 2039
SmlI	CTYRAG	4 cut(s)	713, 1390, 1769, 1922
SmoI	CTYRAG	4 cut(s)	713, 1390, 1769, 1922
SphI	GCATGC	1 cut(s)	828
Sse9I	AATT	3 cut(s)	152, 602, 1523
SseBI	AGGCCT	1 cut(s)	1754
SspDI	GGCGCC	1 cut(s)	1984
SspMI	CTAG	2 cut(s)	810, 905
SstI	GAGCTC	3 cut(s)	1215, 1437, 1923
StuI	AGGCCT	1 cut(s)	1754
StyI	CCWWGG	3 cut(s)	52, 112, 1323
TaaI	ACNGT	7 cut(s)	703, 914, 1451, 1542, 1610, 1785, 1849
TaiI	ACGT	5 cut(s)	390, 963, 1080, 1251, 1399
TaqI	TCGA	5 cut(s)	593, 954, 1155, 1209, 1245
TasI	AATT	3 cut(s)	152, 602, 1523
TatI	WGTACW	1 cut(s)	1512
Tru1I	TTAA	5 cut(s)	18, 126, 417, 1770, 2055
Tru9I	TTAA	5 cut(s)	18, 126, 417, 1770, 2055
TscAI	CASTG	3 cut(s)	1203, 1602, 1921
TseFI	GTSAC	5 cut(s)	178, 277, 1843, 1951, 2047
TseI	GCWGC	3 cut(s)	5, 191, 290
Tsp45I	GTSAC	5 cut(s)	178, 277, 1843, 1951, 2047
TspDTI	ATGAA	4 cut(s)	630, 1072, 1303, 1901
TspGWI	ACGGA	4 cut(s)	87, 810, 1093, 1791
TspMI	CCCGGG	2 cut(s)	484, 1642
TspRI	CASTG	3 cut(s)	1203, 1602, 1921
Van91I	CCANNNNNTGG	1 cut(s)	118
Vha464I	CTTAAG	1 cut(s)	1769
VneI	GTGCAC	1 cut(s)	1055
VpaK11BI	GGWCC	2 cut(s)	1792, 1995
XceI	RCATGY	3 cut(s)	828, 1192, 1414
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1067
XmaI	CCCGGG	2 cut(s)	484, 1642
XmiI	GTMKAC	2 cut(s)	397, 1245
XmnI	GAANNNNTTC	1 cut(s)	621
XspI	CTAG	2 cut(s)	810, 905
ZraI	GACGTC	1 cut(s)	1249
Zsp2I	ATGCAT	2 cut(s)	534, 733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.