Rorug02G0016200

Galactose oxidase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
1371033 .. 1376234
5202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0016200.1

Sequence Viewer

Length: 4284 bp
ATGGCGTTTGATCAAAATTCGGTTCCCCAAGATTTGAGGCCTTTAAATGTAGCTCGGAGTGTGGCTGAGGAGCCCCGCATTGCGTTGGCTACTACAGCTGGGTTTCTCCCCAACCTTGCTCAAGGTAATAGTCCTATGTATTACCCTGGGCCGGTTTCAGAGGCGGGGTATGTTAGTTTAGGGTATGGGAATCCGGTGACGGGTGTGGCCACATGGGGCCCTAGGATGCCTGTGCCGGTGGGGCATCCGGGTGTGAGCCCTGCAATTGGTGTGGGAATCGGTTACAGTCCTAATTTGGGGAGTAGGGTTGTTGGGAGTGCGGTTGATCTTGTAAGCTCTCCTGCAGCAGCTGGAGCTGGGCCTTATGTGTGTAGTTCGAATGTGGGGAGTATGGTTGTTGGTAATGGTTTGGATCAGGGTGTTAGTGATTTGTCAGCTCGGTTTGGTTATAGTACCAATTTAGGCAGTAAGAGCAATTTTGGTGATCAGTCGGGTAGTGATTTGACATCTGGGTTTGCTTACAGTCCTAATATGGGAAATCGGAGTGATCAAGCCAGTGATGATGGTGGAGATGATTCTGTGTCAGGGAGGAAAATAAAGCTGCTGTGCAGTTTTGGTGGCAAGATTTTGCCCAGACCAAGTGATGGGATGTTGAGATATGTTGGAGGACAGACAAGGATTATTAGTGTTCGGAGAGATGTGAACTTCTACGAGCTAGTGCAGAAAATGGTGGATTCATACGGGCAATCTGTGGTTATTAAATATCAGCTCCCCGACGAGGATCTTGATGCACTGGTGTCAGTTTCATGTGCTGATGATCTTGACAATATGAAGGATGAGTATGAGAAGTTAGTGGAGAGGTCTCCAGATGGGTCAGCAAAACTGAGGGTGTTTCTATTTTCTGCTTCAGAACTCGATACATCTGGTTCTGTACAGTTTGGGGATTTACATGATAGTGGGCAGAGATATGTTGATGCTGTGAATGGGATTACGGATGGGGTTGGTAGTGGTATGATGAGGAGAGAGAGTATAACAAGTGCAACTTCAACACAGAATTCTGATATTAGTGGAACTGATGCTGTTGATAGCTCAGCTCCTTGCCAGGGGGATGTAGCTGGAACTACAGGCCGGTTATCGCCTAAAGGGGACAAGTTATCCCCTAAAGGAGGTTCGACCAACTCTCAGGACACTGGTACAAGATTGGTTCTTACAGATCCCAACCCTGCAGTTTATGAAGTTTCTACAGTTCCATCAGGCATTAATGTGGTTAAGACTGGCCCTCCCCAAACATCATCTTCTCTGCCTGAGGTAGAGTTAGAAAGGACTGTGCCTGTTACAGTATCACAGCAACAACTGGGGTTGCAGCAACCTGGAATTGACATTCAGTCCACTTCTCCTTATCTGCAAGCTTATGTTAACCCTCGCCAGCTTCTTCCCCAGATGGGATTCCCAAATCCTCACCTGTTTGGGACTGCTGGTCCTGTCTTTACCCAACAGCAATTCCGTGATAGTGGTGCTGGCATGACCTCGCATCACTTCATTCCTGCAGTGCATATGACAATGAGTCCTTCATCTTCTCATGTTAGTATGAGACCAAATGTGCTTCAGCCATTGATGCAACCCCAACAGACTCGATTAGATCATCATTATGTGGATGAAACTGCCTTTGGCCCCAGGGTTGTCCAGCTTCCAGCTGAACAAAGCTATAATACATATCAGGTGCAGGTCCCCTCACCAGCAGCAGGAAGTGCTTATGGCTGGCATCAGTTTCCACCGCCGGAACATATGATTTTCCATGATGGTTTGGTCTCCCACCAACAGGTAATGTATCCTGAGAAATCCAAAAGGTTGGAAGACTGCTTTATGTGTCAGAAGGCTTTGCCTCATGCACATTCTGACCCGGTCCCAGTACAGGGTCAACGAGACGGTGGTGCAAGCCCTGTATCTGATTCAGATTCAAATTACCATAGTCTCCTTATGAAGGAAAACTGGAGATCTCAGCCAACAAACAGGGTTGTGGTAAGTGGAGCATTGGGGGAAGGTAATGTTGGGCAGGGAGTTGAGATTAGACCCGGGGTCCAAGGCCAAGTAGATCCTCTTGTTGGAACACCGCATTCAGATGCAACTGGGATAGTGCAGAATTCTGAGGGAAAATATGAGGAGGAGAGAAATAATCTTCAACAAGTTGATCATCCAATGATTTCAGCACCCCAGGGTGTCATGAGGAGGGTTGCCCCAGCCCAGTATCAGGTTAAACAGGAAGATTTGGTTAACACTCCTGTTAATCAAGAGGTACCACTTACTGGAGGCCTGCCTGTTCAAACTCCGGAATGCCTGGTTCGTGAGTCTCCGCAAGCATATTCCAACAAATTTCTGAAAGAAGAAAATGTTTCTCAGATGATGGAAACCTTCAGGATAAGCCCATCTGAGGTTTATGTTAATAATGAGCATGGTAAGCCACCTGTTGAAACGCCTAGAAGGGAAGACAGCTATGATCAGAAACCACCACAAGTTGCAGGAAGGGAGTTACCTCCAGATAATATCTTTGACAGGAATCAATTTATTCCAACTGAAGTACTGGCTTCTTACACTACTGGAGTCTCACAAATGCATAGTACACAGCCAGTAGAATTCGTTGAGGCACCACAACCATCTATGTGGGGAAATCCTGAATCTTATCAACAATCAAGAATTGGAGTCCCTGTGGATTCTCATGCATTTCATTATGGCAACCCTGTTGTTTCCACCCCTCTACCTAATAGAACTCAACCTCCTACTGAATGGACAAATGAGAACTTGAGATTCCAGCCCAACATGGTACCTACTGATGTTGAAGTTGTTACTTCAAATGGTAACATCCCATCTTCTTTCTCTACACCTATGAGAACGGTCGATGTCCAGGACTCTTCAAACTCACTATTCAGCGATCAAGATCCTTGGAATTTGCACCATGATACTCATCTTCCACCTCCTATACCTACCAAAATACAATTGAAAAAGGAACCCTGTACAAATAGAGATCCCTTTGGTGGCAATGGTGCAGAACTAAATACAGAAATGCGATTGGAGGATGTAGGTCAACAGCCACCGGGCAATTTGAACAAGGATCTTAGTCCAGATCTTGCCCAGTCTTCCAAAGAATCAGCGGAGGAACTGATCAAGCAAGGTAAAGCTGTTGCTGAGGGTGTAGCTGCCTCAGTTTTGCAGTCATCTCCGCCGTCAAATCCTGATTTTCATGACAAAAATGAGTCTGCATATGATTCCAACCAACATGAAGGTCAAATCAGCACTTCAAGCATGCAGCGCACCGTTGAGGACGTCAAGACCCAATATCCAGATAAGCCAAATCTGGGGTTTCCAGTATCAGATGGCATTGGCCGGCTGCAGATTATTAAGAATAGTGACCTTGAAGAGCTCAGAGAATTGGGTTCTGGAACCTTTGGTACCGTCTACCATGGAAAGTGGAGGGGCACTGATGTTGCAATCAAACGAATCAATGATAGGTGTTTTGCTGGGAAGCCTTCAGAACAGGAGCGGATGAGAAATGATTTCTGGAATGAGGCCATCAACCTCGCTGACTTGCACCACCCAAATGTGGTAGCTTTTTATGGCGTTGTACTTGATGGCCCGGGAGGTTCTGTGGCAACCGTAACAGAGTTTATGGTTAATGGTTCTCTTAGAAATGCATTGCAGAAGAATGAGAAGAGTCTGGACAAGCGCAAACGTCTATTGATTGCAATGGATGTGGCATTTGGAATGGAGTACCTGCATGGAAAGAATATAGTGCACTTTGATTTGAAAAGTGACAACTTACTTGTCAATCTTCGAGATCCACACCGCCCAATTTGCAAGGTTGGTGATTTGGGCCTATCAAAGGTGAAATGTCAGACCCTGATCTCCGGTGGTGTGCGAGGGACACTTCCATGGATGGCACCAGAACTTTTGAATGGTAGCAGTAGCCTTGTCTCTGAGAAGGTTGATGTTTTTTCTTTTGGTATCGTACTGTGGGAGCTCCTCACTGGAGAAGAACCATATGGGAACTTACACTATGGTGCTATCATAGGCGGTATTGTGAGTAATACATTGCGGCCACCAATCCCTGAGTCTTGTGATTCAGAGTGGAAATTACTGATGGAGAGATGCTGGTCATCAGAGCCATCTGAGAGACTGAACTTCACTGAGATTGCAAACCAATTACGTGCTATGGCTGCAAAGATTCCTCCTAAAGTACAAGGCCAAACACAGCAGCAACCGCCCTCAACGCTGCCTCAGGTTCAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1427

Amino Acids

154.94

Weight (kDa)

5.23

Isoelectric Point (pI)

46.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 218 - 301 2.9e-14 PB1 domain
Pkinase PF00069 1137 - 1397 4.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1138 - 1399 8.3e-60 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 3321
Acc36I ACCTGC 2 cut(s) 1714, 3774
Acc65I GGTACC 3 cut(s) 2293, 2818, 3443
AccB1I GGYRCC 5 cut(s) 2293, 2641, 2818, 3443, 3931
AccB7I CCANNNNNTGG 2 cut(s) 644, 2303
AccBSI CCGCTC 1 cut(s) 3535
AccI GTMKAC 1 cut(s) 3450
AccIII TCCGGA 1 cut(s) 2326
AclWI GGATC 8 cut(s) 420, 789, 1208, 2087, 2927, 3014, 3114, 3824
AcoI YGGCCR 3 cut(s) 207, 3376, 4088
AcsI RAATTY 6 cut(s) 16, 1054, 2140, 2369, 2630, 2941
AcuI CTGAAG 5 cut(s) 891, 1589, 2395, 2592, 3507
AcyI GRCGYC 1 cut(s) 3318
AhdI GACNNNNNGTC 4 cut(s) 1384, 1476, 1563, 2075
AjnI CCWGG 7 cut(s) 145, 1101, 1369, 1673, 2211, 2334, 2898
AjuI GAANNNNNNNTTGG 4 cut(s) 1650, 1682, 2031, 2063
AleI CACNNNNGTG 1 cut(s) 4050
AloI GAACNNNNNNTCC 2 cut(s) 2755, 2787
Alw21I GWGCWC 3 cut(s) 3417, 3789, 4014
Alw26I GTCTC 9 cut(s) 867, 1585, 1813, 1917, 1976, 2352, 2605, 3970, 4159
Alw44I GTGCAC 1 cut(s) 3785
AlwI GGATC 8 cut(s) 420, 789, 1208, 2087, 2927, 3014, 3114, 3824
AlwNI CAGNNNCTG 2 cut(s) 350, 3892
Ama87I CYCGRG 2 cut(s) 2072, 3628
Aor13HI TCCGGA 1 cut(s) 2326
ApaI GGGCCC 1 cut(s) 221
ApaLI GTGCAC 1 cut(s) 3785
ApoI RAATTY 6 cut(s) 16, 1054, 2140, 2369, 2630, 2941
AseI ATTAAT 1 cut(s) 1260
Asp718I GGTACC 3 cut(s) 2293, 2818, 3443
AspA2I CCTAGG 1 cut(s) 221
AspLEI GCGC 2 cut(s) 3306, 3720
AsuC2I CCSGG 7 cut(s) 249, 1901, 2073, 2074, 3090, 3629, 3630
AsuHPI GGTGA 6 cut(s) 208, 494, 1451, 1725, 3869, 3889
AsuII TTCGAA 1 cut(s) 377
AvaI CYCGRG 2 cut(s) 2072, 3628
AvaII GGWCC 4 cut(s) 1478, 1726, 1903, 2077
AvrII CCTAGG 1 cut(s) 221
AxyI CCTNAGG 2 cut(s) 1305, 4269
BaeGI GKGCMC 3 cut(s) 221, 3473, 3789
BalI TGGCCA 1 cut(s) 209
BanI GGYRCC 5 cut(s) 2293, 2641, 2818, 3443, 3931
BanII GRGCYC 5 cut(s) 75, 221, 260, 3417, 4014
BbsI GAAGAC 3 cut(s) 1860, 2490, 3123
Bbv12I GWGCWC 3 cut(s) 3417, 3789, 4014
BbvCI CCTCAGC 2 cut(s) 66, 3180
BceAI ACGGC 1 cut(s) 3202
BciT130I CCWGG 7 cut(s) 147, 1103, 1371, 1675, 2213, 2336, 2900
BciVI GTATCC 1 cut(s) 1839
BclI TGATCA 6 cut(s) 10, 484, 547, 2188, 2494, 3156
BcnI CCSGG 7 cut(s) 249, 1901, 2073, 2074, 3090, 3629, 3630
BcoDI GTCTC 9 cut(s) 867, 1585, 1813, 1917, 1976, 2352, 2605, 3970, 4159
BfaI CTAG 3 cut(s) 222, 716, 2475
BfmI CTRYAG 7 cut(s) 93, 342, 1122, 1224, 1242, 1545, 3383
BfuAI ACCTGC 2 cut(s) 1714, 3774
BfuI GTATCC 1 cut(s) 1839
BglI GCCNNNNNGGC 1 cut(s) 241
BglII AGATCT 2 cut(s) 1994, 3118
BlnI CCTAGG 1 cut(s) 221
BlpI GCTNAGC 1 cut(s) 1090
BmcAI AGTACT 1 cut(s) 2577
Bme18I GGWCC 4 cut(s) 1478, 1726, 1903, 2077
BmeRI GACNNNNNGTC 4 cut(s) 1384, 1476, 1563, 2075
BmeT110I CYCGRG 2 cut(s) 2072, 3628
BmrI ACTGGG 5 cut(s) 1364, 1901, 2136, 2236, 3121
BmuI ACTGGG 5 cut(s) 1364, 1901, 2136, 2236, 3121
BpiI GAAGAC 3 cut(s) 1860, 2490, 3123
BpmI CTGGAG 7 cut(s) 372, 849, 2011, 2325, 2517, 2616, 4041
Bpu10I CCTNAGC 2 cut(s) 66, 3180
Bpu1102I GCTNAGC 1 cut(s) 1090
Bpu14I TTCGAA 1 cut(s) 377
BpuEI CTTGAG 2 cut(s) 105, 2818
BpuMI CCSGG 7 cut(s) 249, 1901, 2073, 2074, 3090, 3629, 3630
BsaAI YACGTR 1 cut(s) 4199
BsaBI GATNNNNATC 2 cut(s) 2931, 2958
BsaHI GRCGYC 1 cut(s) 3318
BsaI GGTCTC 3 cut(s) 867, 1585, 1813
BsaWI WCCGGW 3 cut(s) 193, 2326, 3899
Bse118I RCCGGY 4 cut(s) 151, 235, 1128, 3378
Bse21I CCTNAGG 2 cut(s) 1305, 4269
Bse3DI GCAATG 5 cut(s) 78, 3040, 3686, 3744, 4082
Bse8I GATNNNNATC 2 cut(s) 2931, 2958
BseAI TCCGGA 1 cut(s) 2326
BseBI CCWGG 7 cut(s) 147, 1103, 1371, 1675, 2213, 2336, 2900
BseJI GATNNNNATC 2 cut(s) 2931, 2958
BseMI GCAATG 5 cut(s) 78, 3040, 3686, 3744, 4082
BseRI GAGGAG 6 cut(s) 83, 1033, 2174, 2177, 2239, 4004
BseSI GKGCMC 3 cut(s) 221, 3473, 3789
BseYI CCCAGC 4 cut(s) 98, 356, 2236, 3512
BsgI GTGCAG 5 cut(s) 628, 740, 1742, 2156, 3060
Bsh1285I CGRYCG 1 cut(s) 2892
BshNI GGYRCC 5 cut(s) 2293, 2641, 2818, 3443, 3931
BsiEI CGRYCG 1 cut(s) 2892
BsiHKAI GWGCWC 3 cut(s) 3417, 3789, 4014
BsiHKCI CYCGRG 2 cut(s) 2072, 3628
BslFI GGGAC 6 cut(s) 1160, 1483, 1712, 1889, 2684, 3928
BsmAI GTCTC 9 cut(s) 867, 1585, 1813, 1917, 1976, 2352, 2605, 3970, 4159
BsmBI CGTCTC 1 cut(s) 1917
BsmFI GGGAC 6 cut(s) 1160, 1483, 1712, 1889, 2684, 3928
BsmI GAATGC 2 cut(s) 2113, 2336
Bso31I GGTCTC 3 cut(s) 867, 1585, 1813
BsoBI CYCGRG 2 cut(s) 2072, 3628
Bsp119I TTCGAA 1 cut(s) 377
Bsp120I GGGCCC 1 cut(s) 217
Bsp1286I GDGCHC 7 cut(s) 75, 221, 260, 3417, 3473, 3789, 4014
Bsp13I TCCGGA 1 cut(s) 2326
Bsp1407I TGTACA 2 cut(s) 931, 3008
Bsp1720I GCTNAGC 1 cut(s) 1090
Bsp19I CCATGG 2 cut(s) 3454, 3923
BspEI TCCGGA 1 cut(s) 2326
BspHI TCATGA 2 cut(s) 2220, 3235
BspMAI CTGCAG 4 cut(s) 346, 1228, 1549, 3387
BspMI ACCTGC 2 cut(s) 1714, 3774
BspPI GGATC 8 cut(s) 420, 789, 1208, 2087, 2927, 3014, 3114, 3824
BspQI GCTCTTC 1 cut(s) 3405
BspT104I TTCGAA 1 cut(s) 377
BspT107I GGYRCC 5 cut(s) 2293, 2641, 2818, 3443, 3931
BspTNI GGTCTC 3 cut(s) 867, 1585, 1813
BsrBI CCGCTC 1 cut(s) 3535
BsrDI GCAATG 5 cut(s) 78, 3040, 3686, 3744, 4082
BsrFI RCCGGY 4 cut(s) 151, 235, 1128, 3378
BsrGI TGTACA 2 cut(s) 931, 3008
BssAI RCCGGY 4 cut(s) 151, 235, 1128, 3378
BssNI GRCGYC 1 cut(s) 3318
BssT1I CCWWGG 5 cut(s) 221, 2080, 2936, 3454, 3923
Bst2UI CCWGG 7 cut(s) 147, 1103, 1371, 1675, 2213, 2336, 2900
Bst6I CTCTTC 3 cut(s) 2911, 3405, 3698
BstACI GRCGYC 1 cut(s) 3318
BstAPI GCANNNNNTGC 1 cut(s) 1748
BstAUI TGTACA 2 cut(s) 931, 3008
BstBAI YACGTR 1 cut(s) 4199
BstBI TTCGAA 1 cut(s) 377
BstC8I GCNNGC 9 cut(s) 1407, 1427, 1519, 1760, 1936, 2312, 2355, 3299, 3380
BstDSI CCRYGG 2 cut(s) 3454, 3923
BstENI CCTNNNNNAGG 3 cut(s) 1164, 1979, 3872
BstHHI GCGC 2 cut(s) 3306, 3720
BstMAI GTCTC 9 cut(s) 867, 1585, 1813, 1917, 1976, 2352, 2605, 3970, 4159
BstMCI CGRYCG 1 cut(s) 2892
BstNI CCWGG 7 cut(s) 147, 1103, 1371, 1675, 2213, 2336, 2900
BstNSI RCATGY 1 cut(s) 3301
BstSFI CTRYAG 7 cut(s) 93, 342, 1122, 1224, 1242, 1545, 3383
BstSLI GKGCMC 3 cut(s) 221, 3473, 3789
BstV2I GAAGAC 3 cut(s) 1860, 2490, 3123
BstX2I RGATCY 9 cut(s) 781, 1213, 1994, 2092, 2932, 3019, 3106, 3118, 3829
BstXI CCANNNNNNTGG 2 cut(s) 1849, 2658
BstYI RGATCY 9 cut(s) 781, 1213, 1994, 2092, 2932, 3019, 3106, 3118, 3829
Bsu36I CCTNAGG 2 cut(s) 1305, 4269
BsuI GTATCC 1 cut(s) 1839
BtgI CCRYGG 2 cut(s) 3454, 3923
BtsI GCAGTG 1 cut(s) 1554
BtsIMutI CAGTG 7 cut(s) 562, 791, 1188, 1554, 3471, 4017, 4176
BveI ACCTGC 2 cut(s) 1714, 3774
Cac8I GCNNGC 9 cut(s) 1407, 1427, 1519, 1760, 1936, 2312, 2355, 3299, 3380
CaiI CAGNNNCTG 2 cut(s) 350, 3892
CciI TCATGA 2 cut(s) 2220, 3235
CfoI GCGC 2 cut(s) 3306, 3720
Cfr10I RCCGGY 4 cut(s) 151, 235, 1128, 3378
Cfr9I CCCGGG 2 cut(s) 2072, 3628
CspCI CAANNNNNGTGG 4 cut(s) 252, 287, 3726, 3761
DraI TTTAAA 1 cut(s) 45
DriI GACNNNNNGTC 4 cut(s) 1384, 1476, 1563, 2075
EaeI YGGCCR 3 cut(s) 207, 3376, 4088
Eam1104I CTCTTC 3 cut(s) 2911, 3405, 3698
Eam1105I GACNNNNNGTC 4 cut(s) 1384, 1476, 1563, 2075
EarI CTCTTC 3 cut(s) 2911, 3405, 3698
EciI GGCGGA 1 cut(s) 3204
Ecl136II GAGCTC 2 cut(s) 3415, 4012
Eco130I CCWWGG 5 cut(s) 221, 2080, 2936, 3454, 3923
Eco147I AGGCCT 2 cut(s) 40, 2310
Eco24I GRGCYC 5 cut(s) 75, 221, 260, 3417, 4014
Eco31I GGTCTC 3 cut(s) 867, 1585, 1813
Eco47I GGWCC 4 cut(s) 1478, 1726, 1903, 2077
Eco53kI GAGCTC 2 cut(s) 3415, 4012
Eco57I CTGAAG 5 cut(s) 891, 1589, 2395, 2592, 3507
Eco81I CCTNAGG 2 cut(s) 1305, 4269
Eco88I CYCGRG 2 cut(s) 2072, 3628
EcoICRI GAGCTC 2 cut(s) 3415, 4012
EcoNI CCTNNNNNAGG 3 cut(s) 1164, 1979, 3872
EcoO109I RGGNCCY 3 cut(s) 217, 218, 1726
EcoRI GAATTC 3 cut(s) 1054, 2140, 2630
EcoRII CCWGG 7 cut(s) 145, 1101, 1369, 1673, 2211, 2334, 2898
EcoT14I CCWWGG 5 cut(s) 221, 2080, 2936, 3454, 3923
EcoT22I ATGCAT 3 cut(s) 2613, 2719, 3688
EcoT38I GRGCYC 5 cut(s) 75, 221, 260, 3417, 4014
ErhI CCWWGG 5 cut(s) 221, 2080, 2936, 3454, 3923
Esp3I CGTCTC 1 cut(s) 1917
FalI AAGNNNNNCTT 2 cut(s) 1027, 1059
FaqI GGGAC 6 cut(s) 1160, 1483, 1712, 1889, 2684, 3928
FauI CCCGC 2 cut(s) 83, 157
FauNDI CATATG 4 cut(s) 1554, 1785, 3256, 4033
FbaI TGATCA 6 cut(s) 10, 484, 547, 2188, 2494, 3156
FblI GTMKAC 1 cut(s) 3450
FriOI GRGCYC 5 cut(s) 75, 221, 260, 3417, 4014
FspBI CTAG 3 cut(s) 222, 716, 2475
GlaI GCGC 2 cut(s) 3305, 3719
GsaI CCCAGC 4 cut(s) 102, 360, 2240, 3516
GsuI CTGGAG 7 cut(s) 372, 849, 2011, 2325, 2517, 2616, 4041
HhaI GCGC 2 cut(s) 3306, 3720
Hin1I GRCGYC 1 cut(s) 3318
Hin6I GCGC 2 cut(s) 3304, 3718
HinP1I GCGC 2 cut(s) 3304, 3718
HincII GTYRAC 4 cut(s) 1417, 1919, 2272, 3080
HindII GTYRAC 4 cut(s) 1417, 1919, 2272, 3080
HindIII AAGCTT 1 cut(s) 1407
HpaI GTTAAC 2 cut(s) 1417, 2272
HphI GGTGA 6 cut(s) 208, 494, 1451, 1725, 3869, 3889
Hpy166II GTNNAC 9 cut(s) 703, 1389, 1417, 1919, 2272, 2618, 3080, 3451, 3787
Hpy8I GTNNAC 9 cut(s) 703, 1389, 1417, 1919, 2272, 2618, 3080, 3451, 3787
Hpy99I CGWCG 1 cut(s) 779
HpyCH4IV ACGT 3 cut(s) 3318, 3724, 4198
HpySE526I ACGT 3 cut(s) 3318, 3724, 4198
Hsp92I GRCGYC 1 cut(s) 3318
HspAI GCGC 2 cut(s) 3304, 3718
Kpn2I TCCGGA 1 cut(s) 2326
KpnI GGTACC 3 cut(s) 2297, 2822, 3447
KroI GCCGGC 1 cut(s) 3378
KroNI GCCGGC 1 cut(s) 3380
Ksp22I TGATCA 6 cut(s) 10, 484, 547, 2188, 2494, 3156
KspAI GTTAAC 2 cut(s) 1417, 2272
LguI GCTCTTC 1 cut(s) 3405
LmnI GCTCC 8 cut(s) 70, 353, 774, 1099, 2027, 3532, 4009, 4017
MaeI CTAG 3 cut(s) 222, 716, 2475
MaeII ACGT 3 cut(s) 3318, 3724, 4198
MaeIII GTNAC 9 cut(s) 196, 281, 1333, 2526, 2839, 2852, 3401, 3649, 3803
MbiI CCGCTC 1 cut(s) 3535
MfeI CAATTG 2 cut(s) 264, 2990
MflI RGATCY 9 cut(s) 781, 1213, 1994, 2092, 2932, 3019, 3106, 3118, 3829
MhlI GDGCHC 7 cut(s) 75, 221, 260, 3417, 3473, 3789, 4014
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 9 cut(s) 1573, 1624, 2354, 2607, 2706, 2897, 3257, 3715, 4112
MmeI TCCRAC 6 cut(s) 643, 1830, 2083, 2388, 2591, 3288
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 3 cut(s) 2613, 2719, 3688
MroI TCCGGA 1 cut(s) 2326
MroNI GCCGGC 1 cut(s) 3378
MscI TGGCCA 1 cut(s) 209
MslI CAYNNNNRTG 9 cut(s) 249, 954, 1262, 1647, 2118, 2656, 3591, 3922, 4050
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 4 cut(s) 98, 350, 1694, 3146
MunI CAATTG 2 cut(s) 264, 2990
Mva1269I GAATGC 2 cut(s) 2113, 2336
MvaI CCWGG 7 cut(s) 147, 1103, 1371, 1675, 2213, 2336, 2900
NaeI GCCGGC 1 cut(s) 3380
NciI CCSGG 7 cut(s) 249, 1901, 2073, 2074, 3090, 3629, 3630
NcoI CCATGG 2 cut(s) 3454, 3923
NdeI CATATG 4 cut(s) 1554, 1785, 3256, 4033
NgoMIV GCCGGC 1 cut(s) 3378
NmuCI GTSAC 3 cut(s) 196, 3401, 3803
NsiI ATGCAT 3 cut(s) 2613, 2719, 3688
NspI RCATGY 1 cut(s) 3301
NspV TTCGAA 1 cut(s) 377
OliI CACNNNNGTG 1 cut(s) 4050
PaeI GCATGC 1 cut(s) 3301
PagI TCATGA 2 cut(s) 2220, 3235
PasI CCCWGGG 3 cut(s) 146, 1674, 2212
PceI AGGCCT 2 cut(s) 40, 2310
PciSI GCTCTTC 1 cut(s) 3405
PctI GAATGC 2 cut(s) 2113, 2336
PdiI GCCGGC 1 cut(s) 3380
PflFI GACNNNGTC 1 cut(s) 1901
PflMI CCANNNNNTGG 2 cut(s) 644, 2303
PfoI TCCNGGA 1 cut(s) 2898
PleI GAGTC 9 cut(s) 1572, 1624, 2353, 2606, 2705, 2897, 3256, 3714, 4111
PpsI GAGTC 9 cut(s) 1572, 1624, 2353, 2606, 2705, 2897, 3256, 3714, 4111
Ppu21I YACGTR 1 cut(s) 4199
PpuMI RGGWCCY 1 cut(s) 1726
PshBI ATTAAT 1 cut(s) 1260
Psp124BI GAGCTC 2 cut(s) 3417, 4014
Psp5II RGGWCCY 1 cut(s) 1726
Psp6I CCWGG 7 cut(s) 145, 1101, 1369, 1673, 2211, 2334, 2898
PspFI CCCAGC 4 cut(s) 98, 356, 2236, 3512
PspGI CCWGG 7 cut(s) 145, 1101, 1369, 1673, 2211, 2334, 2898
PspOMI GGGCCC 1 cut(s) 217
PspPPI RGGWCCY 1 cut(s) 1726
PsrI GAACNNNNNNTAC 2 cut(s) 3427, 3459
PstI CTGCAG 4 cut(s) 346, 1228, 1549, 3387
PstNI CAGNNNCTG 2 cut(s) 350, 3892
PsuI RGATCY 9 cut(s) 781, 1213, 1994, 2092, 2932, 3019, 3106, 3118, 3829
PsyI GACNNNGTC 1 cut(s) 1901
PvuII CAGCTG 3 cut(s) 98, 350, 1694
RseI CAYNNNNRTG 9 cut(s) 249, 954, 1262, 1647, 2118, 2656, 3591, 3922, 4050
SacI GAGCTC 2 cut(s) 3417, 4014
SapI GCTCTTC 1 cut(s) 3405
ScaI AGTACT 1 cut(s) 2577
SchI GAGTC 9 cut(s) 1573, 1624, 2354, 2607, 2706, 2897, 3257, 3715, 4112
SduI GDGCHC 7 cut(s) 75, 221, 260, 3417, 3473, 3789, 4014
SfcI CTRYAG 7 cut(s) 93, 342, 1122, 1224, 1242, 1545, 3383
SfuI TTCGAA 1 cut(s) 377
SinI GGWCC 4 cut(s) 1478, 1726, 1903, 2077
SmaI CCCGGG 2 cut(s) 2074, 3630
SmiMI CAYNNNNRTG 9 cut(s) 249, 954, 1262, 1647, 2118, 2656, 3591, 3922, 4050
SmlI CTYRAG 2 cut(s) 120, 2797
SmoI CTYRAG 2 cut(s) 120, 2797
SphI GCATGC 1 cut(s) 3301
SseBI AGGCCT 2 cut(s) 40, 2310
SspMI CTAG 3 cut(s) 222, 716, 2475
SstI GAGCTC 2 cut(s) 3417, 4014
StuI AGGCCT 2 cut(s) 40, 2310
StyI CCWWGG 5 cut(s) 221, 2080, 2936, 3454, 3923
TaiI ACGT 3 cut(s) 3321, 3727, 4201
TaqI TCGA 6 cut(s) 377, 915, 1172, 1633, 2892, 3826
TatI WGTACW 7 cut(s) 931, 1909, 2575, 2615, 3008, 3616, 4228
TauI GCSGC 1 cut(s) 4090
TscAI CASTG 7 cut(s) 562, 798, 1195, 1554, 3478, 4024, 4183
TseFI GTSAC 3 cut(s) 196, 3401, 3803
Tsp45I GTSAC 3 cut(s) 196, 3401, 3803
TspGWI ACGGA 2 cut(s) 1007, 1493
TspMI CCCGGG 2 cut(s) 2072, 3628
TspRI CASTG 7 cut(s) 562, 798, 1195, 1554, 3478, 4024, 4183
Tth111I GACNNNGTC 1 cut(s) 1901
Van91I CCANNNNNTGG 2 cut(s) 644, 2303
VneI GTGCAC 1 cut(s) 3785
VpaK11BI GGWCC 4 cut(s) 1478, 1726, 1903, 2077
VspI ATTAAT 1 cut(s) 1260
XagI CCTNNNNNAGG 3 cut(s) 1164, 1979, 3872
XapI RAATTY 6 cut(s) 16, 1054, 2140, 2369, 2630, 2941
XceI RCATGY 1 cut(s) 3301
XmaI CCCGGG 2 cut(s) 2072, 3628
XmaJI CCTAGG 1 cut(s) 221
XmiI GTMKAC 1 cut(s) 3450
XspI CTAG 3 cut(s) 222, 716, 2475
ZraI GACGTC 1 cut(s) 3319
ZrmI AGTACT 1 cut(s) 2577
Zsp2I ATGCAT 3 cut(s) 2613, 2719, 3688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.