Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002555.1

Orthogroup ID

OG0002243

Physical Location & Seq

Genomic Coordinates Reverse (-)

20444 .. 32431

Gene Structure 11988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002555.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3018 bp

atggcgtcaaaacatggatcacgatcgaaaaaactaggttccagcaattcaagagctgctaattctccgtcatcttcgactacatcgtcttcgaaacaatatttggaaacttctattgaagggcagagctctcctgcatcttcttcagctcgaagtaagccacagtacttttacacggaaagtttgccacaagatgcagaaaggtccaaagaaaatgtcacagtgacggtccgctttcgtccactcagtccaagggaaattcgccaaggagaagaaattgcatggtatgcagatggagacactattctgcggaatgagcataatccatcaatagcttatgcatacgatcgggtgtttggtcctacaaccacaacacgccatgtctatgatgttgctgctcagcatgttgttagtggcgctatggaaggagtcaatggtacaatttttgcatatggggtcaccagcagcgggaagactcacacaatgcatggtgatcaaaggtcgcctggaattataccactggctgtgaaagatgcgtttagcatcatccaagagactccaaaccgagagtttcttcttcgtgtgtcatacttggagatctataatgaggttgttaatgacttgttgaatccagcaggacagaatttacgaattagagaggatgctcagggcacatttgttgaaggaataaaggaagaagtagtgctatccccagctcatgccctgtcacttatagcagctggagaagagcacaggcatgttggatcaacaaatttcaatttactcagtagcaggagccatactatatttacactgacaatcgagagtagcccgtgtggggaaaatagtgaaggtgaagctgtaaatctgtcgcaattgaacctcattgatctggctggttctgagagctcaaaagctgaaactactggtgtcagacgaaaagaaggatcctatattaataagagtctgctaactctaggaactgttatatcaaagttgacggatgggagggctactcatataccctacagggattctaaactgacccgacttctccaatcttcgctaagtggtcatgggcgtgtctctctcatctgcactgttactccttcatcaagcagttcagaagagacgcataatacattaaagtttgcgcaccgggcaaagcacattgaaattcaagcagcacaaaataagattattgatgagaagtcacttatcaagaaatatcaaaatgagattcgtaatttaaaggaagagttagaacagttgaagaagggtattgttacagttcctcaactaaaagatgccagtgaaaatgatattctgcttctaaaacaaaagttagaagatggcaaattcaaactgcaatcaagattggaacaagaggaagaagccaaagctgctttgttaggaagaatccaaaggttgacaaagttgattttggtctccacaaaagcaacacagccatcaaggtttcctcaccgacctggtcttagaagaagacattcctttggggaagaggagcttgcatatctaccatacaaaaggcgggacttgattttagaggatgaaaacattgacttgtttgtttctcctcttgaggggaatactgaaactgctgatgatacgctgaaggagggtaagaagactcggaagcatggactgttaaactggttaaagctacggaaacgagatagtggtggtgggacattgacaagcactagtgataaatccagtggaatgaaatctactagtcaaccatcaacacctcaagcagaaaatagtaattttcatgcagaatcgaggctttcccattctctacttacagagagctctccatctgctgatcttttgactgatgctatagaggatagagaggtacctcaggataaattcctgggacaagagacacctacgaccagcataaaatcaattgatctattaagagagcagcaaaaaatcttgtccggagaggtagcactccattcaagtgcactgaagcgtttgtctgaggaggcggcaaaaaccccccagaaggacggattaaatatggagatgcgaaagttaaaagatgaaatcaaggcgaagaatgaacaaatagctctgctggaaaagaaaattgccgattcgttgattgtttcacccaccaaaatgcatcaaatcgaaatatcccaatctattgccgaagtggtggcacaattgaatgagaagtccttcgaactcgaggttaaagctgctgataatcgtattattcaagagcagctagaacaaaagatctgcgaatgcaaagaattgcaggaaacagttgcctccctgaagcagcagctctctgaggcactggagtttagaaatttgagtccaataatcagttcgcaaactgactcaagaatcgcgcatgcgggagagaatgcagtgttgaatcacacaaatgaagttttccttacagataagcaggcgcttgagattgaagaactgaagcagaaggtggctgaaatgacagagtcaaaagagcagttagaacttcggaatcagaaactggtggaggaaagttcatatgccaaaggtttagcctcagctgctgctgttgagctcaaggcattatcggaggaagttgccaaactcatgaaccataatgagagactagctgctgagctggccgcatctaagaactcccccacccagcgtcgaagtggtaacacactccggaatggtcgaagagagagtcacgtcaaacagaatgaccacagtgggcccgtctcagaaatgaagagagaactggccatgagcaaggagagagagctttcatatgaggcggctcttacggagaaggataaaagagaggctgagcttcaaagaagggttgaggaatccaagcaaagagaagcatacttggaaaatgaacttgctaacatgtgggttcttgtagcaaagttgaaaaaaactcatggagctgaaactgatgcttctgaatcaacaagagagaccagactaactgatggcttggggggatggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1005

Amino Acids

111.79

Weight (kDa)

6.45

Isoelectric Point (pI)

57.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12020 AT3G12020 AT3G12020 AT3G12020 AT5G06670 AT5G06670 AT5G06670 AT5G06670
fragaria_vesca	FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780
malus_domestica	MD12G1054300.v1.1 MD14G1053100.v1.1
prunus_persica	Prupe.7G082400_v2.0.a1
pyrus_communis	pycom12g04730 pycom14g04410
rosa_chinensis	RchiOBHm_Chr3g0479141
rosa_laevigata	RLG00000023604
rosa_multiflora	Rmu_co8049936.1_g000001 Rmu_co8383491.1_g000001 Rmu_sc0002555.1_g000005
rosa_roxburghii	Rroxscaffold_6G00402700
rosa_rugosa	Rorug03G0171300 Rorug03G0171400
rosa_samantha	Rh3AG222600 Rh3BG255100 Rh3CG250700 Rh3DG247100 Rh6AG090700 Rh6BG153100 Rh6CG078500 Rh6DG074300 Rh6DG137500
rosa_wichuraiana	Rw0G001170 Rw1G014040 Rw3G019950 Rw6G024570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	85
Acc16I	TGCGCA	1 cut(s)	1155
Acc65I	GGTACC	1 cut(s)	1882
AccB1I	GGYRCC	1 cut(s)	1882
AccII	CGCG	1 cut(s)	2396
AccIII	TCCGGA	2 cut(s)	1970, 2706
AciI	CCGC	8 cut(s)	232, 310, 468, 1552, 2021, 2402, 2661, 2816
AclWI	GGATC	4 cut(s)	25, 772, 942, 955
AcoI	YGGCCR	2 cut(s)	2658, 2781
AcsI	RAATTY	7 cut(s)	258, 643, 772, 1176, 1358, 1895, 2353
AcuI	CTGAAG	5 cut(s)	129, 1655, 2021, 2339, 2498
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	167, 439, 1884
AfiI	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2038
AflIII	ACRYGT	1 cut(s)	2913
AhlI	ACTAGT	2 cut(s)	1724, 1754
AjiI	CACGTC	1 cut(s)	2731
AjnI	CCWGG	3 cut(s)	505, 1489, 1899
AjuI	GAANNNNNNNTTGG	4 cut(s)	86, 118, 2356, 2388
Alw21I	GWGCWC	6 cut(s)	131, 753, 911, 1838, 1999, 2595
Alw26I	GTCTC	9 cut(s)	291, 548, 1090, 1124, 1453, 1904, 2635, 2764, 2978
Alw44I	GTGCAC	1 cut(s)	1995
AlwI	GGATC	4 cut(s)	25, 772, 942, 955
AlwNI	CAGNNNCTG	2 cut(s)	2539, 2582
Ama87I	CYCGRG	1 cut(s)	2225
Aor13HI	TCCGGA	2 cut(s)	1970, 2706
AoxI	GGCC	3 cut(s)	2658, 2753, 2781
ApaI	GGGCCC	1 cut(s)	2757
ApaLI	GTGCAC	1 cut(s)	1995
ApoI	RAATTY	7 cut(s)	258, 643, 772, 1176, 1358, 1895, 2353
ArsI	GACNNNNNNTTYG	4 cut(s)	201, 233, 2710, 2742
AseI	ATTAAT	1 cut(s)	957
Asp700I	GAANNNNTTC	2 cut(s)	1507, 2216
Asp718I	GGTACC	1 cut(s)	1882
AspLEI	GCGC	4 cut(s)	419, 1156, 2398, 2461
AspS9I	GGNCC	5 cut(s)	204, 229, 359, 2753, 2754
AsuC2I	CCSGG	1 cut(s)	1160
AsuHPI	GGTGA	5 cut(s)	451, 503, 866, 1475, 2136
AsuII	TTCGAA	2 cut(s)	92, 2220
AvaI	CYCGRG	1 cut(s)	2225
AvaII	GGWCC	3 cut(s)	204, 229, 359
AxyI	CCTNAGG	1 cut(s)	1887
BaeGI	GKGCMC	3 cut(s)	674, 1999, 2757
BalI	TGGCCA	1 cut(s)	2783
BamHI	GGATCC	1 cut(s)	947
BanI	GGYRCC	1 cut(s)	1882
BanII	GRGCYC	5 cut(s)	131, 911, 1838, 2595, 2757
BbsI	GAAGAC	4 cut(s)	81, 479, 1510, 1655
Bbv12I	GWGCWC	6 cut(s)	131, 753, 911, 1838, 1999, 2595
BbvCI	CCTCAGC	1 cut(s)	2575
BccI	CCATC	9 cut(s)	287, 334, 998, 1346, 1477, 1771, 1849, 2993, 3006
BciT130I	CCWGG	3 cut(s)	507, 1491, 1901
BclI	TGATCA	1 cut(s)	493
BcnI	CCSGG	1 cut(s)	1160
BcoDI	GTCTC	9 cut(s)	291, 548, 1090, 1124, 1453, 1904, 2635, 2764, 2978
BcuI	ACTAGT	2 cut(s)	1724, 1754
BfaI	CTAG	6 cut(s)	35, 977, 1725, 1755, 2267, 2645
BfmI	CTRYAG	2 cut(s)	1027, 1866
BfoI	RGCGCY	2 cut(s)	420, 2462
BglII	AGATCT	2 cut(s)	597, 2277
BlpI	GCTNAGC	3 cut(s)	399, 2652, 2847
BmcAI	AGTACT	1 cut(s)	167
Bme1390I	CCNGG	4 cut(s)	507, 1160, 1491, 1901
Bme18I	GGWCC	3 cut(s)	204, 229, 359
BmeT110I	CYCGRG	1 cut(s)	2225
BmgBI	CACGTC	1 cut(s)	2731
BmgT120I	GGNCC	5 cut(s)	204, 229, 359, 2753, 2754
BmiI	GGNNCC	5 cut(s)	40, 797, 949, 1884, 2755
BmrFI	CCNGG	4 cut(s)	507, 1160, 1491, 1901
BpiI	GAAGAC	4 cut(s)	81, 479, 1510, 1655
BplI	GAGNNNNNCTC	2 cut(s)	1000, 1032
BpmI	CTGGAG	2 cut(s)	762, 2363
Bpu10I	CCTNAGC	2 cut(s)	666, 2575
Bpu1102I	GCTNAGC	3 cut(s)	399, 2652, 2847
Bpu14I	TTCGAA	2 cut(s)	92, 2220
BpuEI	CTTGAG	5 cut(s)	1622, 1758, 2371, 2483, 2579
BpuMI	CCSGG	1 cut(s)	1160
BsaBI	GATNNNNATC	1 cut(s)	22
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	1453, 2978
BsaJI	CCNNGG	3 cut(s)	251, 265, 1900
BsaWI	WCCGGW	2 cut(s)	1970, 2706
BsaXI	ACNNNNNCTCC	2 cut(s)	1090, 1120
Bsc4I	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2038
Bse1I	ACTGG	8 cut(s)	525, 931, 1311, 1679, 1737, 2346, 2544, 2784
Bse21I	CCTNAGG	1 cut(s)	1887
Bse8I	GATNNNNATC	1 cut(s)	22
BseAI	TCCGGA	2 cut(s)	1970, 2706
BseBI	CCWGG	3 cut(s)	507, 1491, 1901
BseDI	CCNNGG	3 cut(s)	251, 265, 1900
BseGI	GGATG	5 cut(s)	546, 667, 1009, 1576, 3017
BseJI	GATNNNNATC	1 cut(s)	22
BseLI	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2038
BseNI	ACTGG	8 cut(s)	525, 931, 1311, 1679, 1737, 2346, 2544, 2784
BseRI	GAGGAG	3 cut(s)	1538, 1587, 2030
BseSI	GKGCMC	3 cut(s)	674, 1999, 2757
BseYI	CCCAGC	2 cut(s)	712, 2682
BsgI	GTGCAG	1 cut(s)	1081
Bsh1236I	CGCG	1 cut(s)	2396
Bsh1285I	CGRYCG	2 cut(s)	26, 349
BshFI	GGCC	3 cut(s)	2660, 2755, 2783
BshNI	GGYRCC	1 cut(s)	1882
BsiEI	CGRYCG	2 cut(s)	26, 349
BsiHKAI	GWGCWC	6 cut(s)	131, 753, 911, 1838, 1999, 2595
BsiHKCI	CYCGRG	1 cut(s)	2225
BsiSI	CCGG	3 cut(s)	1159, 1971, 2707
BslFI	GGGAC	3 cut(s)	1568, 1723, 1917
BslI	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2038
BsmAI	GTCTC	9 cut(s)	291, 548, 1090, 1124, 1453, 1904, 2635, 2764, 2978
BsmBI	CGTCTC	2 cut(s)	1124, 2764
BsmFI	GGGAC	3 cut(s)	1568, 1723, 1917
BsmI	GAATGC	2 cut(s)	2291, 2416
BsnI	GGCC	3 cut(s)	2660, 2755, 2783
Bso31I	GGTCTC	2 cut(s)	1453, 2978
BsoBI	CYCGRG	1 cut(s)	2225
Bsp119I	TTCGAA	2 cut(s)	92, 2220
Bsp120I	GGGCCC	1 cut(s)	2753
Bsp1286I	GDGCHC	8 cut(s)	131, 674, 753, 911, 1838, 1999, 2595, 2757
Bsp13I	TCCGGA	2 cut(s)	1970, 2706
Bsp1720I	GCTNAGC	3 cut(s)	399, 2652, 2847
BspACI	CCGC	8 cut(s)	232, 310, 468, 1552, 2021, 2402, 2661, 2816
BspANI	GGCC	3 cut(s)	2660, 2755, 2783
BspEI	TCCGGA	2 cut(s)	1970, 2706
BspFNI	CGCG	1 cut(s)	2396
BspHI	TCATGA	1 cut(s)	2625
BspLI	GGNNCC	5 cut(s)	40, 797, 949, 1884, 2755
BspPI	GGATC	4 cut(s)	25, 772, 942, 955
BspQI	GCTCTTC	1 cut(s)	741
BspT104I	TTCGAA	2 cut(s)	92, 2220
BspT107I	GGYRCC	1 cut(s)	1882
BspTNI	GGTCTC	2 cut(s)	1453, 2978
BsrI	ACTGG	8 cut(s)	525, 931, 1311, 1679, 1737, 2346, 2544, 2784
BssECI	CCNNGG	3 cut(s)	251, 265, 1900
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	251, 265
Bst2UI	CCWGG	3 cut(s)	507, 1491, 1901
Bst6I	CTCTTC	6 cut(s)	741, 1122, 1251, 1515, 2713, 2765
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstBI	TTCGAA	2 cut(s)	92, 2220
BstC8I	GCNNGC	4 cut(s)	1530, 2400, 2457, 2658
BstEII	GGTNACC	1 cut(s)	457
BstF5I	GGATG	5 cut(s)	546, 667, 1009, 1576, 3017
BstFNI	CGCG	1 cut(s)	2396
BstH2I	RGCGCY	2 cut(s)	420, 2462
BstHHI	GCGC	4 cut(s)	419, 1156, 2398, 2461
BstMAI	GTCTC	9 cut(s)	291, 548, 1090, 1124, 1453, 1904, 2635, 2764, 2978
BstMCI	CGRYCG	2 cut(s)	26, 349
BstMWI	GCNNNNNNNGC	6 cut(s)	287, 316, 1160, 1403, 2579, 2657
BstNI	CCWGG	3 cut(s)	507, 1491, 1901
BstNSI	RCATGY	4 cut(s)	407, 761, 2402, 2917
BstPI	GGTNACC	1 cut(s)	457
BstSCI	CCNGG	4 cut(s)	505, 1158, 1489, 1899
BstSFI	CTRYAG	2 cut(s)	1027, 1866
BstSLI	GKGCMC	3 cut(s)	674, 1999, 2757
BstUI	CGCG	1 cut(s)	2396
BstV2I	GAAGAC	4 cut(s)	81, 479, 1510, 1655
BstX2I	RGATCY	3 cut(s)	597, 947, 2277
BstYI	RGATCY	3 cut(s)	597, 947, 2277
Bsu36I	CCTNAGG	1 cut(s)	1887
BsuRI	GGCC	3 cut(s)	2660, 2755, 2783
BtrI	CACGTC	1 cut(s)	2731
BtsCI	GGATG	5 cut(s)	546, 667, 1009, 1576, 3017
BtsI	GCAGTG	1 cut(s)	2421
Cac8I	GCNNGC	4 cut(s)	1530, 2400, 2457, 2658
CaiI	CAGNNNCTG	2 cut(s)	2539, 2582
CciI	TCATGA	1 cut(s)	2625
CfoI	GCGC	4 cut(s)	419, 1156, 2398, 2461
Cfr13I	GGNCC	5 cut(s)	204, 229, 359, 2753, 2754
CpoI	CGGWCCG	1 cut(s)	229
CseI	GACGC	2 cut(s)	1141, 2675
CsiI	ACCWGGT	1 cut(s)	1489
Csp6I	GTAC	3 cut(s)	166, 438, 1883
CspI	CGGWCCG	1 cut(s)	229
CviQI	GTAC	3 cut(s)	166, 438, 1883
DraI	TTTAAA	1 cut(s)	1251
DrdI	GACNNNNNNGTC	1 cut(s)	85
DseDI	GACNNNNNNGTC	1 cut(s)	85
EaeI	YGGCCR	2 cut(s)	2658, 2781
Eam1104I	CTCTTC	6 cut(s)	741, 1122, 1251, 1515, 2713, 2765
EarI	CTCTTC	6 cut(s)	741, 1122, 1251, 1515, 2713, 2765
Ecl136II	GAGCTC	4 cut(s)	129, 909, 1836, 2593
Eco130I	CCWWGG	2 cut(s)	251, 265
Eco24I	GRGCYC	5 cut(s)	131, 911, 1838, 2595, 2757
Eco31I	GGTCTC	2 cut(s)	1453, 2978
Eco47I	GGWCC	3 cut(s)	204, 229, 359
Eco53kI	GAGCTC	4 cut(s)	129, 909, 1836, 2593
Eco57I	CTGAAG	5 cut(s)	129, 1655, 2021, 2339, 2498
Eco81I	CCTNAGG	1 cut(s)	1887
Eco88I	CYCGRG	1 cut(s)	2225
Eco91I	GGTNACC	1 cut(s)	457
EcoICRI	GAGCTC	4 cut(s)	129, 909, 1836, 2593
EcoO65I	GGTNACC	1 cut(s)	457
EcoRII	CCWGG	3 cut(s)	505, 1489, 1899
EcoT14I	CCWWGG	2 cut(s)	251, 265
EcoT22I	ATGCAT	3 cut(s)	343, 489, 2160
EcoT38I	GRGCYC	5 cut(s)	131, 911, 1838, 2595, 2757
ErhI	CCWWGG	2 cut(s)	251, 265
Esp3I	CGTCTC	2 cut(s)	1124, 2764
FalI	AAGNNNNNCTT	4 cut(s)	1512, 1544, 2427, 2459
FaqI	GGGAC	3 cut(s)	1568, 1723, 1917
FauI	CCCGC	3 cut(s)	461, 1545, 2395
FauNDI	CATATG	3 cut(s)	451, 2557, 2809
FbaI	TGATCA	1 cut(s)	493
FokI	GGATG	4 cut(s)	533, 674, 1016, 1583
FriOI	GRGCYC	5 cut(s)	131, 911, 1838, 2595, 2757
FspBI	CTAG	6 cut(s)	35, 977, 1725, 1755, 2267, 2645
FspI	TGCGCA	1 cut(s)	1155
GlaI	GCGC	4 cut(s)	418, 1155, 2397, 2460
GsaI	CCCAGC	2 cut(s)	716, 2686
GsuI	CTGGAG	2 cut(s)	762, 2363
HaeII	RGCGCY	2 cut(s)	420, 2462
HaeIII	GGCC	3 cut(s)	2660, 2755, 2783
HapII	CCGG	3 cut(s)	1159, 1971, 2707
HgaI	GACGC	2 cut(s)	1141, 2675
HhaI	GCGC	4 cut(s)	419, 1156, 2398, 2461
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	4 cut(s)	417, 1154, 2396, 2459
HinP1I	GCGC	4 cut(s)	417, 1154, 2396, 2459
HincII	GTYRAC	3 cut(s)	999, 1431, 1760
HindII	GTYRAC	3 cut(s)	999, 1431, 1760
HpaII	CCGG	3 cut(s)	1159, 1971, 2707
HphI	GGTGA	5 cut(s)	451, 503, 866, 1475, 2136
Hpy166II	GTNNAC	5 cut(s)	242, 999, 1431, 1760, 1997
Hpy8I	GTNNAC	5 cut(s)	242, 999, 1431, 1760, 1997
Hpy99I	CGWCG	1 cut(s)	2691
HpyCH4IV	ACGT	1 cut(s)	2730
HpyF10VI	GCNNNNNNNGC	6 cut(s)	287, 316, 1160, 1403, 2579, 2657
HpySE526I	ACGT	1 cut(s)	2730
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	4 cut(s)	417, 1154, 2396, 2459
Kpn2I	TCCGGA	2 cut(s)	1970, 2706
KpnI	GGTACC	1 cut(s)	1886
Ksp22I	TGATCA	1 cut(s)	493
LguI	GCTCTTC	1 cut(s)	741
LmnI	GCTCC	3 cut(s)	795, 1525, 2951
MabI	ACCWGGT	1 cut(s)	1489
MaeI	CTAG	6 cut(s)	35, 977, 1725, 1755, 2267, 2645
MaeII	ACGT	1 cut(s)	2730
MaeIII	GTNAC	9 cut(s)	217, 223, 457, 726, 1102, 1212, 1285, 2696, 2726
MfeI	CAATTG	3 cut(s)	875, 1935, 2201
MflI	RGATCY	3 cut(s)	597, 947, 2277
MhlI	GDGCHC	8 cut(s)	131, 674, 753, 911, 1838, 1999, 2595, 2757
MlsI	TGGCCA	1 cut(s)	2783
MluNI	TGGCCA	1 cut(s)	2783
MlyI	GAGTC	9 cut(s)	438, 469, 550, 973, 1645, 2368, 2378, 2513, 2734
MmeI	TCCRAC	1 cut(s)	742
Mox20I	TGGCCA	1 cut(s)	2783
Mph1103I	ATGCAT	3 cut(s)	343, 489, 2160
MroI	TCCGGA	2 cut(s)	1970, 2706
MroXI	GAANNNNTTC	2 cut(s)	1507, 2216
MscI	TGGCCA	1 cut(s)	2783
MslI	CAYNNNNRTG	6 cut(s)	384, 756, 1080, 1992, 2153, 2430
Msp20I	TGGCCA	1 cut(s)	2783
MspA1I	CMGCKG	3 cut(s)	468, 740, 2579
MspI	CCGG	3 cut(s)	1159, 1971, 2707
MspR9I	CCNGG	4 cut(s)	507, 1160, 1491, 1901
MunI	CAATTG	3 cut(s)	875, 1935, 2201
Mva1269I	GAATGC	2 cut(s)	2291, 2416
MvaI	CCWGG	3 cut(s)	507, 1491, 1901
MvnI	CGCG	1 cut(s)	2396
MwoI	GCNNNNNNNGC	6 cut(s)	287, 316, 1160, 1403, 2579, 2657
NciI	CCSGG	1 cut(s)	1160
NdeI	CATATG	3 cut(s)	451, 2557, 2809
NlaIV	GGNNCC	5 cut(s)	40, 797, 949, 1884, 2755
NmuCI	GTSAC	6 cut(s)	217, 223, 457, 726, 1212, 2726
NsbI	TGCGCA	1 cut(s)	1155
NsiI	ATGCAT	3 cut(s)	343, 489, 2160
NspI	RCATGY	4 cut(s)	407, 761, 2402, 2917
NspV	TTCGAA	2 cut(s)	92, 2220
PaeI	GCATGC	1 cut(s)	2402
PaeR7I	CTCGAG	1 cut(s)	2225
PagI	TCATGA	1 cut(s)	2625
PciI	ACATGT	1 cut(s)	2913
PciSI	GCTCTTC	1 cut(s)	741
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PctI	GAATGC	2 cut(s)	2291, 2416
PdmI	GAANNNNTTC	2 cut(s)	1507, 2216
PflFI	GACNNNGTC	2 cut(s)	1491, 2503
Ple19I	CGATCG	2 cut(s)	26, 349
PleI	GAGTC	9 cut(s)	437, 469, 550, 972, 1645, 2367, 2378, 2512, 2733
PpsI	GAGTC	9 cut(s)	437, 469, 550, 972, 1645, 2367, 2378, 2512, 2733
PscI	ACATGT	1 cut(s)	2913
PshBI	ATTAAT	1 cut(s)	957
Psp124BI	GAGCTC	4 cut(s)	131, 911, 1838, 2595
Psp6I	CCWGG	3 cut(s)	505, 1489, 1899
PspEI	GGTNACC	1 cut(s)	457
PspFI	CCCAGC	2 cut(s)	712, 2682
PspGI	CCWGG	3 cut(s)	505, 1489, 1899
PspN4I	GGNNCC	5 cut(s)	40, 797, 949, 1884, 2755
PspOMI	GGGCCC	1 cut(s)	2753
PspPI	GGNCC	5 cut(s)	204, 229, 359, 2753, 2754
PspXI	VCTCGAGB	1 cut(s)	2225
PstNI	CAGNNNCTG	2 cut(s)	2539, 2582
PsuI	RGATCY	3 cut(s)	597, 947, 2277
PsyI	GACNNNGTC	2 cut(s)	1491, 2503
PvuI	CGATCG	2 cut(s)	26, 349
PvuII	CAGCTG	2 cut(s)	740, 2579
RsaI	GTAC	3 cut(s)	167, 439, 1884
RsaNI	GTAC	3 cut(s)	166, 438, 1883
RseI	CAYNNNNRTG	6 cut(s)	384, 756, 1080, 1992, 2153, 2430
Rsr2I	CGGWCCG	1 cut(s)	229
RsrII	CGGWCCG	1 cut(s)	229
SacI	GAGCTC	4 cut(s)	131, 911, 1838, 2595
SapI	GCTCTTC	1 cut(s)	741
Sau96I	GGNCC	5 cut(s)	204, 229, 359, 2753, 2754
ScaI	AGTACT	1 cut(s)	167
SchI	GAGTC	9 cut(s)	438, 469, 550, 973, 1645, 2368, 2378, 2513, 2734
ScrFI	CCNGG	4 cut(s)	507, 1160, 1491, 1901
SduI	GDGCHC	8 cut(s)	131, 674, 753, 911, 1838, 1999, 2595, 2757
SexAI	ACCWGGT	1 cut(s)	1489
SfcI	CTRYAG	2 cut(s)	1027, 1866
Sfr274I	CTCGAG	1 cut(s)	2225
SfuI	TTCGAA	2 cut(s)	92, 2220
SinI	GGWCC	3 cut(s)	204, 229, 359
SlaI	CTCGAG	1 cut(s)	2225
SmiMI	CAYNNNNRTG	6 cut(s)	384, 756, 1080, 1992, 2153, 2430
SmlI	CTYRAG	6 cut(s)	1601, 1773, 2225, 2386, 2462, 2594
SmoI	CTYRAG	6 cut(s)	1601, 1773, 2225, 2386, 2462, 2594
SpeI	ACTAGT	2 cut(s)	1724, 1754
SphI	GCATGC	1 cut(s)	2402
SsiI	CCGC	8 cut(s)	232, 310, 468, 1552, 2021, 2402, 2661, 2816
SspI	AATATT	1 cut(s)	101
SspMI	CTAG	6 cut(s)	35, 977, 1725, 1755, 2267, 2645
SstI	GAGCTC	4 cut(s)	131, 911, 1838, 2595
StyD4I	CCNGG	4 cut(s)	505, 1158, 1489, 1899
StyI	CCWWGG	2 cut(s)	251, 265
TaiI	ACGT	1 cut(s)	2733
TatI	WGTACW	1 cut(s)	165
TauI	GCSGC	3 cut(s)	2024, 2663, 2819
TseFI	GTSAC	6 cut(s)	217, 223, 457, 726, 1212, 2726
Tsp45I	GTSAC	6 cut(s)	217, 223, 457, 726, 1212, 2726
TspGWI	ACGGA	6 cut(s)	57, 191, 1016, 1702, 2058, 2840
Tth111I	GACNNNGTC	2 cut(s)	1491, 2503
VneI	GTGCAC	1 cut(s)	1995
VpaK11BI	GGWCC	3 cut(s)	204, 229, 359
VspI	ATTAAT	1 cut(s)	957
XapI	RAATTY	7 cut(s)	258, 643, 772, 1176, 1358, 1895, 2353
XceI	RCATGY	4 cut(s)	407, 761, 2402, 2917
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2690
XhoI	CTCGAG	1 cut(s)	2225
XmnI	GAANNNNTTC	2 cut(s)	1507, 2216
XspI	CTAG	6 cut(s)	35, 977, 1725, 1755, 2267, 2645
ZrmI	AGTACT	1 cut(s)	167
Zsp2I	ATGCAT	3 cut(s)	343, 489, 2160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.