Rh6AG090700
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
13466996 .. 13481231
14236 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG090700.1

Sequence Viewer

Length: 1659 bp
ATGATATTGGGTGTTGTTCGATTTTTATCCCTCTGTTGCTTTCATGATATGTTGATTCACTTTGTGATCAAGTCTGAATTGCTGTCAACAACAGAGCACAGGCATGTTGGATCAACAAATTTCAATTTACTCAGTAGCAGGAGCCATACTATATTTACACTAACAATCGAGAGTAGCCCGTGTGGGGAAAATAGTGAAGGTGAAGCTGTAAATCTGTCGCAATTGAACCTCATTGATCTGGCTGGTTCTGAGAGCTCAAAAGCTGAAACTACTGGTGTCAGACGAAAAGAAGGATCCTATATTAATAAGAGTCTGCTAACTCTAGGAACTGTTATATCAAAGTTGACGGATGGGAGGGCTACTCATATACCCTACAGGGATTCTAAACTGACCCGACTTCTCCAATCTTCGCTAAGTGGTCATGGGCGTGTCTCTCTCATCTGCACTGTTACTCCTTCATCAAGCAGTTCAGAAGAGACGCATAATACATTAAAGTTTGCGCACCGGGCAAAGCACATTGAAATTCAAGCAGCACAAAATAAGATTATTGATGAGAAGTCACTTATCAAGAAATATCAAAATGAGATTCGTAATTTAAAGGAAGAGTTAGAACAGTTGAAGAAGGGTATTGTTACAGTTCCTCAACTAAAAGATGCTAGCGAAAATGATATTCTGCTTCTAAAACAAAAGTTAGAAGATGGCAAATTCAAACTGCAATCAAGATTGGAACAAGAGGAAGAAGCCAAAGCTGCTTTGTTAGGAAGAATCCAAAGGTTGACAAAGTTGATTTTGGTCTCCACAAAAGCAACACAGCCATCAAGGTTTCCTCACCGACCTGGTCTTAGAAGAAGACATTCCTTTGGGGAAGAGGAGCTTGCATATCTACCATACAAAAGGCGGGACTTGATTTTAGAGGATGAAAACATTGACTTGTTTGTTTCTCCTCTTGAGGGGAATACTGAAACTGCTGATGCGCTGAAGGAGGATAAGAAGACTCGGAAGCATGGACTGTTAAACTGGTTAAAGCTACGGAAGTCGCCGCTTCCTAAATACGAACCCAACTTTTGGTCAAATGCAAATAAGGGCACTTTTCTATTCTCATTGCAAAGAATTGGTATCCAAGACTATGAATTTCCTGGAACGAAGGCTGATTCCACAGTCTCACTGGTTTTACCCTGGTCTACAGACCCACGTATCATGCGCAAGGCTGATTATCTATTCAAACTTTTGTTGAAGAGTCCTGTTCCGGCACCTCTGGCAATACAGTTGGCACTCTTTGGCAGGAAACATGATCTCATCAAGCTTGGCACTCTAAAGGGTGGGATATGCAAAAAATATGGGATCAACAAGGAGAAAATTGATATACTGCGGAGACGTCTCGAACGCTCCTTAAAGATTAAGCGTACCGTGACTATCTCAACAACTGGAGTGACCAAAGAGTACCCCGATGCTCTTGAGAAAGCGAGGCATCTTTTGCAACTTTTGACAACAACTAATGTCCCGCCATCTCGGGTTCATTATGTTGCAAAGTGGAAGGGTATCACTTTCATGACAAGTAGACAAGGATTTGGTGTTGGTGGAGGAACGTCTAGTTTTGCTTGGTGTTCTCTTAAATTATGTTCTGAATTGGCTTCAAGCCTTTTGACTTTGATGATATAA

Protein Analysis

552

Amino Acids

62.16

Weight (kDa)

9.69

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 28 - 173 4.8e-51 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1378
Acc16I TGCGCA 2 cut(s) 501, 1202
AccB1I GGYRCC 1 cut(s) 1249
AccB7I CCANNNNNTGG 1 cut(s) 1065
AccI GTMKAC 2 cut(s) 1181, 1558
AciI CCGC 4 cut(s) 898, 1040, 1369, 1502
AclWI GGATC 4 cut(s) 118, 288, 301, 1349
AcsI RAATTY 4 cut(s) 118, 522, 704, 1130
AcuI CTGAAG 1 cut(s) 998
AcyI GRCGYC 1 cut(s) 1375
AdeI CACNNNGTG 1 cut(s) 64
AfaI GTAC 2 cut(s) 1405, 1442
AfiI CCNNNNNNNGG 3 cut(s) 184, 950, 1065
AgsI TTSAA 9 cut(s) 124, 226, 521, 527, 619, 709, 1222, 1234, 1635
AjnI CCWGG 3 cut(s) 835, 1135, 1175
AluBI AGCT 7 cut(s) 206, 255, 263, 749, 874, 1027, 1303
AluI AGCT 7 cut(s) 206, 255, 263, 749, 874, 1027, 1303
Alw21I GWGCWC 2 cut(s) 99, 257
Alw26I GTCTC 6 cut(s) 436, 470, 799, 1165, 1366, 1382
AlwI GGATC 4 cut(s) 118, 288, 301, 1349
Ama87I CYCGRG 1 cut(s) 1509
ApeKI GCWGC 2 cut(s) 530, 749
ApoI RAATTY 4 cut(s) 118, 522, 704, 1130
AseI ATTAAT 1 cut(s) 303
Asp700I GAANNNNTTC 1 cut(s) 853
AspLEI GCGC 3 cut(s) 502, 976, 1203
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 2 cut(s) 212, 821
AsuNHI GCTAGC 1 cut(s) 656
AvaI CYCGRG 1 cut(s) 1509
BaeGI GKGCMC 1 cut(s) 1088
BaeI ACNNNNGTAYC 2 cut(s) 1177, 1210
BamHI GGATCC 1 cut(s) 293
BanI GGYRCC 1 cut(s) 1249
BanII GRGCYC 1 cut(s) 257
BbsI GAAGAC 2 cut(s) 856, 998
Bbv12I GWGCWC 2 cut(s) 99, 257
BbvI GCAGC 2 cut(s) 542, 736
BccI CCATC 4 cut(s) 344, 692, 823, 1513
BciT130I CCWGG 3 cut(s) 837, 1137, 1177
BciVI GTATCC 1 cut(s) 1127
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 6 cut(s) 436, 470, 799, 1165, 1366, 1382
BfaI CTAG 3 cut(s) 323, 657, 1590
BfmI CTRYAG 2 cut(s) 373, 1182
BfuI GTATCC 1 cut(s) 1127
BisI GCNGC 3 cut(s) 531, 750, 1040
BlsI GCNGC 3 cut(s) 532, 751, 1041
Bme1390I CCNGG 4 cut(s) 506, 837, 1137, 1177
BmeT110I CYCGRG 1 cut(s) 1509
BmiI GGNNCC 3 cut(s) 143, 295, 1251
BmrFI CCNGG 4 cut(s) 506, 837, 1137, 1177
BmsI GCATC 4 cut(s) 643, 961, 1438, 1477
BmtI GCTAGC 1 cut(s) 660
BpiI GAAGAC 2 cut(s) 856, 998
BplI GAGNNNNNCTC 2 cut(s) 346, 378
BpmI CTGGAG 1 cut(s) 1446
BpuEI CTTGAG 2 cut(s) 968, 1475
BpuMI CCSGG 1 cut(s) 506
BsaAI YACGTR 1 cut(s) 1193
BsaBI GATNNNNATC 1 cut(s) 25
BsaHI GRCGYC 1 cut(s) 1375
BsaI GGTCTC 1 cut(s) 799
BsaJI CCNNGG 1 cut(s) 1175
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 950, 1065
Bse1I ACTGG 4 cut(s) 277, 1022, 1170, 1429
Bse3DI GCAATG 1 cut(s) 1100
Bse8I GATNNNNATC 1 cut(s) 25
BseBI CCWGG 3 cut(s) 837, 1137, 1177
BseDI CCNNGG 1 cut(s) 1175
BseGI GGATG 2 cut(s) 355, 922
BseJI GATNNNNATC 1 cut(s) 25
BseLI CCNNNNNNNGG 3 cut(s) 184, 950, 1065
BseMI GCAATG 1 cut(s) 1100
BseMII CTCAG 2 cut(s) 145, 240
BseNI ACTGG 4 cut(s) 277, 1022, 1170, 1429
BseRI GAGGAG 2 cut(s) 884, 933
BseSI GKGCMC 1 cut(s) 1088
BseXI GCAGC 2 cut(s) 542, 736
BsgI GTGCAG 1 cut(s) 427
BshNI GGYRCC 1 cut(s) 1249
BsiHKAI GWGCWC 2 cut(s) 99, 257
BsiHKCI CYCGRG 1 cut(s) 1509
BsiSI CCGG 2 cut(s) 505, 1247
BslFI GGGAC 2 cut(s) 914, 1484
BslI CCNNNNNNNGG 3 cut(s) 184, 950, 1065
BsmAI GTCTC 6 cut(s) 436, 470, 799, 1165, 1366, 1382
BsmBI CGTCTC 3 cut(s) 470, 1366, 1382
BsmFI GGGAC 2 cut(s) 914, 1484
Bso31I GGTCTC 1 cut(s) 799
BsoBI CYCGRG 1 cut(s) 1509
Bsp1286I GDGCHC 3 cut(s) 99, 257, 1088
Bsp143I GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
BspACI CCGC 4 cut(s) 898, 1040, 1369, 1502
BspCNI CTCAG 2 cut(s) 144, 241
BspHI TCATGA 2 cut(s) 43, 1548
BspLI GGNNCC 3 cut(s) 143, 295, 1251
BspOI GCTAGC 1 cut(s) 660
BspPI GGATC 4 cut(s) 118, 288, 301, 1349
BspT107I GGYRCC 1 cut(s) 1249
BspTNI GGTCTC 1 cut(s) 799
BsrDI GCAATG 1 cut(s) 1100
BsrI ACTGG 4 cut(s) 277, 1022, 1170, 1429
BssECI CCNNGG 1 cut(s) 1175
BssMI GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
BssNI GRCGYC 1 cut(s) 1375
Bst2UI CCWGG 3 cut(s) 837, 1137, 1177
Bst4CI ACNGT 8 cut(s) 331, 448, 615, 637, 1011, 1159, 1266, 1408
Bst6I CTCTTC 4 cut(s) 468, 597, 861, 1229
BstACI GRCGYC 1 cut(s) 1375
BstAPI GCANNNNNTGC 1 cut(s) 1474
BstBAI YACGTR 1 cut(s) 1193
BstC8I GCNNGC 2 cut(s) 658, 876
BstDEI CTNAG 4 cut(s) 131, 249, 413, 842
BstF5I GGATG 2 cut(s) 355, 922
BstHHI GCGC 3 cut(s) 502, 976, 1203
BstKTI GATC 6 cut(s) 69, 113, 238, 296, 1294, 1344
BstMAI GTCTC 6 cut(s) 436, 470, 799, 1165, 1366, 1382
BstMBI GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
BstMWI GCNNNNNNNGC 4 cut(s) 506, 749, 1256, 1474
BstNI CCWGG 3 cut(s) 837, 1137, 1177
BstNSI RCATGY 1 cut(s) 107
BstSCI CCNGG 4 cut(s) 504, 835, 1135, 1175
BstSFI CTRYAG 2 cut(s) 373, 1182
BstSLI GKGCMC 1 cut(s) 1088
BstV1I GCAGC 2 cut(s) 542, 736
BstV2I GAAGAC 2 cut(s) 856, 998
BstX2I RGATCY 1 cut(s) 293
BstYI RGATCY 1 cut(s) 293
BsuI GTATCC 1 cut(s) 1127
BtsCI GGATG 2 cut(s) 355, 922
BtsIMutI CAGTG 2 cut(s) 444, 1163
Cac8I GCNNGC 2 cut(s) 658, 876
CciI TCATGA 2 cut(s) 43, 1548
CfoI GCGC 3 cut(s) 502, 976, 1203
CseI GACGC 1 cut(s) 487
CsiI ACCWGGT 1 cut(s) 835
Csp6I GTAC 2 cut(s) 1404, 1441
CviAII CATG 7 cut(s) 44, 104, 422, 1004, 1198, 1289, 1549
CviQI GTAC 2 cut(s) 1404, 1441
DdeI CTNAG 4 cut(s) 131, 249, 413, 842
DpnI GATC 6 cut(s) 68, 112, 237, 295, 1293, 1343
DpnII GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
DraI TTTAAA 1 cut(s) 597
DraIII CACNNNGTG 1 cut(s) 64
Eam1104I CTCTTC 4 cut(s) 468, 597, 861, 1229
EarI CTCTTC 4 cut(s) 468, 597, 861, 1229
Ecl136II GAGCTC 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 257
Eco31I GGTCTC 1 cut(s) 799
Eco53kI GAGCTC 1 cut(s) 255
Eco57I CTGAAG 1 cut(s) 998
Eco88I CYCGRG 1 cut(s) 1509
EcoICRI GAGCTC 1 cut(s) 255
EcoRII CCWGG 3 cut(s) 835, 1135, 1175
EcoT38I GRGCYC 1 cut(s) 257
Esp3I CGTCTC 3 cut(s) 470, 1366, 1382
FaeI CATG 7 cut(s) 47, 107, 425, 1007, 1201, 1292, 1552
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 2 cut(s) 914, 1484
FatI CATG 7 cut(s) 43, 103, 421, 1003, 1197, 1288, 1548
FauI CCCGC 2 cut(s) 891, 1509
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 2 cut(s) 1181, 1558
Fnu4HI GCNGC 3 cut(s) 531, 750, 1040
FokI GGATG 2 cut(s) 362, 929
FriOI GRGCYC 1 cut(s) 257
Fsp4HI GCNGC 3 cut(s) 531, 750, 1040
FspBI CTAG 3 cut(s) 323, 657, 1590
FspI TGCGCA 2 cut(s) 501, 1202
GlaI GCGC 3 cut(s) 501, 975, 1202
GluI GCNGC 3 cut(s) 531, 750, 1040
GsuI CTGGAG 1 cut(s) 1446
HapII CCGG 2 cut(s) 505, 1247
HgaI GACGC 1 cut(s) 487
HhaI GCGC 3 cut(s) 502, 976, 1203
Hin1I GRCGYC 1 cut(s) 1375
Hin1II CATG 7 cut(s) 47, 107, 425, 1007, 1201, 1292, 1552
Hin6I GCGC 3 cut(s) 500, 974, 1201
HinP1I GCGC 3 cut(s) 500, 974, 1201
HincII GTYRAC 3 cut(s) 87, 345, 777
HindII GTYRAC 3 cut(s) 87, 345, 777
HindIII AAGCTT 1 cut(s) 1301
HinfI GANTC 8 cut(s) 55, 310, 380, 586, 765, 994, 1151, 1237
HpaII CCGG 2 cut(s) 505, 1247
HphI GGTGA 2 cut(s) 212, 821
Hpy166II GTNNAC 5 cut(s) 87, 345, 777, 1182, 1559
Hpy188I TCNGA 6 cut(s) 76, 250, 281, 472, 999, 1624
Hpy188III TCNNGA 8 cut(s) 44, 169, 568, 720, 947, 1379, 1454, 1549
Hpy8I GTNNAC 5 cut(s) 87, 345, 777, 1182, 1559
HpyAV CCTTC 7 cut(s) 191, 284, 465, 616, 973, 1138, 1528
HpyCH4III ACNGT 8 cut(s) 331, 448, 615, 637, 1011, 1159, 1266, 1408
HpyCH4IV ACGT 3 cut(s) 1192, 1375, 1586
HpyCH4V TGCA 8 cut(s) 444, 715, 878, 1076, 1105, 1329, 1477, 1526
HpyF10VI GCNNNNNNNGC 4 cut(s) 506, 749, 1256, 1474
HpyF3I CTNAG 4 cut(s) 131, 249, 413, 842
HpySE526I ACGT 3 cut(s) 1192, 1375, 1586
Hsp92I GRCGYC 1 cut(s) 1375
Hsp92II CATG 7 cut(s) 47, 107, 425, 1007, 1201, 1292, 1552
HspAI GCGC 3 cut(s) 500, 974, 1201
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
LmnI GCTCC 3 cut(s) 141, 871, 1391
Lsp1109I GCAGC 2 cut(s) 542, 736
LweI GCATC 4 cut(s) 643, 961, 1438, 1477
MabI ACCWGGT 1 cut(s) 835
MaeI CTAG 3 cut(s) 323, 657, 1590
MaeII ACGT 3 cut(s) 1192, 1375, 1586
MaeIII GTNAC 5 cut(s) 448, 558, 631, 1408, 1429
MalI GATC 6 cut(s) 68, 112, 237, 295, 1293, 1343
MboI GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
MfeI CAATTG 1 cut(s) 221
MflI RGATCY 1 cut(s) 293
MhlI GDGCHC 3 cut(s) 99, 257, 1088
MlyI GAGTC 3 cut(s) 319, 988, 1246
MmeI TCCRAC 1 cut(s) 88
MroXI GAANNNNTTC 1 cut(s) 853
MseI TTAA 8 cut(s) 303, 491, 596, 1013, 1022, 1391, 1398, 1611
MslI CAYNNNNRTG 3 cut(s) 102, 426, 1547
MspI CCGG 2 cut(s) 505, 1247
MspR9I CCNGG 4 cut(s) 506, 837, 1137, 1177
MunI CAATTG 1 cut(s) 221
MvaI CCWGG 3 cut(s) 837, 1137, 1177
MwoI GCNNNNNNNGC 4 cut(s) 506, 749, 1256, 1474
NciI CCSGG 1 cut(s) 506
NdeII GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
NheI GCTAGC 1 cut(s) 656
NlaIII CATG 7 cut(s) 47, 107, 425, 1007, 1201, 1292, 1552
NlaIV GGNNCC 3 cut(s) 143, 295, 1251
NmuCI GTSAC 3 cut(s) 558, 1408, 1429
NsbI TGCGCA 2 cut(s) 501, 1202
NspI RCATGY 1 cut(s) 107
PagI TCATGA 2 cut(s) 43, 1548
PdmI GAANNNNTTC 1 cut(s) 853
PfeI GAWTC 5 cut(s) 55, 380, 586, 765, 1151
PflFI GACNNNGTC 1 cut(s) 837
PflMI CCANNNNNTGG 1 cut(s) 1065
PfoI TCCNGGA 1 cut(s) 1135
PkrI GCNGC 3 cut(s) 532, 751, 1041
PleI GAGTC 3 cut(s) 318, 988, 1245
PpsI GAGTC 3 cut(s) 318, 988, 1245
Ppu21I YACGTR 1 cut(s) 1193
PshBI ATTAAT 1 cut(s) 303
Psp124BI GAGCTC 1 cut(s) 257
Psp6I CCWGG 3 cut(s) 835, 1135, 1175
PspGI CCWGG 3 cut(s) 835, 1135, 1175
PspN4I GGNNCC 3 cut(s) 143, 295, 1251
PsuI RGATCY 1 cut(s) 293
PsyI GACNNNGTC 1 cut(s) 837
RsaI GTAC 2 cut(s) 1405, 1442
RsaNI GTAC 2 cut(s) 1404, 1441
RseI CAYNNNNRTG 3 cut(s) 102, 426, 1547
SacI GAGCTC 1 cut(s) 257
SaqAI TTAA 8 cut(s) 303, 491, 596, 1013, 1022, 1391, 1398, 1611
SatI GCNGC 3 cut(s) 531, 750, 1040
Sau3AI GATC 6 cut(s) 66, 110, 235, 293, 1291, 1341
SchI GAGTC 3 cut(s) 319, 988, 1246
ScrFI CCNGG 4 cut(s) 506, 837, 1137, 1177
SduI GDGCHC 3 cut(s) 99, 257, 1088
SexAI ACCWGGT 1 cut(s) 835
SfaNI GCATC 4 cut(s) 643, 961, 1438, 1477
SfcI CTRYAG 2 cut(s) 373, 1182
SmiMI CAYNNNNRTG 3 cut(s) 102, 426, 1547
SmlI CTYRAG 2 cut(s) 947, 1454
SmoI CTYRAG 2 cut(s) 947, 1454
SsiI CCGC 4 cut(s) 898, 1040, 1369, 1502
SspMI CTAG 3 cut(s) 323, 657, 1590
SstI GAGCTC 1 cut(s) 257
StyD4I CCNGG 4 cut(s) 504, 835, 1135, 1175
TaaI ACNGT 8 cut(s) 331, 448, 615, 637, 1011, 1159, 1266, 1408
TaiI ACGT 3 cut(s) 1195, 1378, 1589
TaqI TCGA 3 cut(s) 19, 168, 1380
TauI GCSGC 1 cut(s) 1042
TfiI GAWTC 5 cut(s) 55, 380, 586, 765, 1151
Tru1I TTAA 8 cut(s) 303, 491, 596, 1013, 1022, 1391, 1398, 1611
Tru9I TTAA 8 cut(s) 303, 491, 596, 1013, 1022, 1391, 1398, 1611
TscAI CASTG 2 cut(s) 451, 1170
TseFI GTSAC 3 cut(s) 558, 1408, 1429
TseI GCWGC 2 cut(s) 530, 749
Tsp45I GTSAC 3 cut(s) 558, 1408, 1429
TspDTI ATGAA 6 cut(s) 32, 447, 933, 1143, 1505, 1537
TspGWI ACGGA 2 cut(s) 362, 1045
TspRI CASTG 2 cut(s) 451, 1170
Tth111I GACNNNGTC 1 cut(s) 837
Van91I CCANNNNNTGG 1 cut(s) 1065
VspI ATTAAT 1 cut(s) 303
XapI RAATTY 4 cut(s) 118, 522, 704, 1130
XceI RCATGY 1 cut(s) 107
XcmI CCANNNNNNNNNTGG 1 cut(s) 1162
XmiI GTMKAC 2 cut(s) 1181, 1558
XmnI GAANNNNTTC 1 cut(s) 853
XspI CTAG 3 cut(s) 323, 657, 1590
ZraI GACGTC 1 cut(s) 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.