Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002243

Physical Location & Seq

Genomic Coordinates Reverse (-)

25125075 .. 25138253

Gene Structure 13179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00402700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

ATGGCGTCAAAACATGGATCACGGTCGAAAAAATTAGGTTTGAGCAATTCGAGAGCTGCTAATTCTCCGTCATCTTCGACTACATCATCTTCAAAACAATATTTGGAAACTTCTATCGAAGGTCAGAGCTCTCCTGCATCTTCTTCAGCTCGAAGTAAGCCACAGTACTTTTACACGGAAAGTTTGCCACAAGATGCGGAAAGGTCCAAAGAAAATGTCACAGTGACGGTTCGCTTTCGTCCACTCAGTCCAAGGGAAATTCGCCAAGGAGAAGAAATTGCATGGTATGCAGATGGAGACACTATTCTGCGGAATGAGCATAATCCATCAATAGCATATGCATACGATCGGGTGTTTGGCCCTACAACCACAACACGCCATGTCTATGATGTTGCTGCTCAGCATGTTGTTAGTGGCGCTATGGAAGGAGTCAACGGTACAATTTTTGCATATGGGGTCACCAGCAGCGGGAAGACTCACACAATGCATGGTGATCAAAGGTCGCCTGGAATTATACCACTGGCTGTGAAAGATGCGTTTAGCATCATCCAAGAGGTTGTTAATGACTTGTTGAATCCAGCAGGACAGAATTTACGAATTAGAGAGGATGCTCAGGCTGTAGATTCAGTGTCTACTCCTTCTGCTGTTCTTACAATCGAGAGTAGCCCGTGTGGGGAAAATAGTGAAGGTGAAGCTGTAAATCTGTCGCAATTGAACCTCATTGATCTGGCTGGTTCTGAGAGCTCAAAAGCTGAAACTACTGGTGTCAGACGAAAAGAAGGATCCTATATTAATAAGAGTCTGCTAACTCTAGGAACTGTGAGGCCTCAAGTTATATCAAAGTTGACGGATGGAAGGGCTACTCATATACCCTACAGGGATTCTAAACTGACCCGACTTCTCCAATCTTCGCTAAGCGGTCATGGGCGTGTCTCTCTCATCTGCACTGTCACTCCTTCATCAAGCAGTTCAGAAGAGACGCATAATACATTAAAGTTTGCGCACCGGGCAAAGCACATTGAAATTCAAGCAGCACAAAATAAGATTATTGATGAGAAGTCACTTATCAAGAAATATCAAAATGAGATTCGTAATTTAAAGGAAGAGTTAGAACAGTTGAAGAAGGGTATTGTTACAGTTCCTCAACTGAAAGATGCTGGCGAAAATGATATTCTGCTTCTAAAACAAAAGTTAGAAGATGGCAAATTCAAACTGCAATCAAGATTGGAACAAGAGGAAGAAGCCAAAGCTGCTTTGTTAGGAAGAATCCAAAGGTTGACAAAGTTGATTTTGGTCTCCACAAAAGCAACACAGCCATCAAGGTTTCCTCACCGACCTGGTCTTAGAAGAAGACATTCCTTTGGGGAAGAGGAGCTTGCATATCTACCATACAAAAGGCGGGACTTGATTTTAGAGGATGAAAACATTGACTTGTTGGTTTCTCCTCTTGAGGGGAATACTGAAACTGCTGATGAGACACCGAAGGAGGATAAGAAGACTCGGAAGCATGGACTGTTAAACTGGTTAAAGCTACGGAAACGAGATAGTGGTGGTGGGACATTGACAAGCACTAGTGATAAATCCAGTGGAATGAAATCTACTAGTCAACCATCAACACCTCAAGCAGAAAATAGTAATATTCATGCAGAATCGAGGCTTTCCCAGTCTCTACTTACAGAGAGCTCTCCATCTGCTGATCTTTTTACTGATGCTATAGAGGATAGAGAGGTACCTCGGGATAAATTCCTGGGACAAGAGACACCTACGACCAGCATAAAATCAATTGATCAGATCGATCTATTAAGAGAGCAGCAAAAAATCTTGTCTGGAGAGGTAGCACTCCATTCAAGTGCCCTGAAGCGTTTGTCTGAGGAGGCGGCAAAAAACCCCCAGAAGGACGGATTAAATATGGAGATGCGAAAGTTAAAAGATGAAATCAAGGCGAAGAATGAACAAATAGCTCTGCTGGAAAAGAAAATTGCCGATTCGTTGATTGTTTCACCCACCAAAATGGATCAAATCGAAATATCCCAATCTATTGCCGAAGTGGTGGCACAATTGAATGAGAAGTCCTTCGAACTCGAGATCTGCGAATGCAAAGAATTGCAGGAAACAGTTGCCTCCCTGAAGCAGCAGCTCTCTGAGGCACTGGAGTTTAGAAATTTGAGTCCAATAATCGGTTCGCAAACTGACTCAAGAATCGTGCATGCGGGAGAGAATGCAGTGTTGAATCATACAAATGAAGTTTTCCTTACAGATAAGCAGGCGCTTGAGATTGAAGAACTGAAGCAGAAGGTGGCTGAAATGACAGAGTCAAAAGAACAGTTAGAACTTCGGAACCAGAAACTGGTGGAGGAAAGTTCATATGCCAAAGGTTTAGCCTCAGCTGCTGCTGTTGAGCTCAAGGCATTATCAGAGGAAGTTGCCAAACTCATGAACCATAATGAGAGACTAGCTGCTGAGCTGGCCGCATCTAAGAACTCCCCCACCCAGCGTCGAAGTGGTAACACACTCCGGAATGGTCGAAGAGAGAGTCACCTCAAACAGAATGACCACAGTGGGCCTGTCTCAGAAATGAAGAGAGAACTGGCCATGAGTAAGGAGAGAGAGCTTTCATATGAGGCGGCTCTTACGGAGAAGGATAGAAGAGAGGCTGAGCTTCAAAGAAGGGTTGAGGAATCCAAGCAAAGAGAAGCATACTTGGAAAATGAACTTGCTAACATGTGGGTTCTTGTGGCAAAGTTGAAAAAAACTCATGGAGCTGAAACTGATGCTTCTGAATCTACAAGAGAGACCAGACTAACTGATGGCTTGGGGGGATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

941

Amino Acids

104.46

Weight (kDa)

6.41

Isoelectric Point (pI)

59.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	72 - 203	5.6e-13	Microtubule binding
Kinesin	PF00225	78 - 187	1.2e-26	Kinesin motor domain
Kinesin	PF00225	199 - 340	2.2e-38	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12020 AT3G12020 AT3G12020 AT3G12020 AT5G06670 AT5G06670 AT5G06670 AT5G06670
fragaria_vesca	FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780
malus_domestica	MD12G1054300.v1.1 MD14G1053100.v1.1
prunus_persica	Prupe.7G082400_v2.0.a1
pyrus_communis	pycom12g04730 pycom14g04410
rosa_chinensis	RchiOBHm_Chr3g0479141
rosa_laevigata	RLG00000023604
rosa_multiflora	Rmu_co8049936.1_g000001 Rmu_co8383491.1_g000001 Rmu_sc0002555.1_g000005
rosa_roxburghii	Rroxscaffold_6G00402700
rosa_rugosa	Rorug03G0171300 Rorug03G0171400
rosa_samantha	Rh3AG222600 Rh3BG255100 Rh3CG250700 Rh3DG247100 Rh6AG090700 Rh6BG153100 Rh6CG078500 Rh6DG074300 Rh6DG137500
rosa_wichuraiana	Rw0G001170 Rw1G014040 Rw3G019950 Rw6G024570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1002
Acc65I	GGTACC	1 cut(s)	1729
AccB1I	GGYRCC	1 cut(s)	1729
AccB7I	CCANNNNNTGG	1 cut(s)	2347
AccI	GTMKAC	1 cut(s)	632
AccIII	TCCGGA	1 cut(s)	2514
AciI	CCGC	9 cut(s)	197, 310, 468, 918, 1399, 1877, 2210, 2469, 2624
AclWI	GGATC	4 cut(s)	25, 777, 790, 2022
AcoI	YGGCCR	2 cut(s)	2466, 2589
AcsI	RAATTY	6 cut(s)	258, 589, 1023, 1205, 1742, 2161
AcuI	CTGAAG	4 cut(s)	129, 1877, 2147, 2306
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	167, 439, 1731
AfiI	CCNNNNNNNGG	6 cut(s)	468, 673, 1451, 1894, 2177, 2347
AflIII	ACRYGT	1 cut(s)	2721
AhlI	ACTAGT	2 cut(s)	1571, 1601
AjnI	CCWGG	3 cut(s)	505, 1336, 1746
AjuI	GAANNNNNNNTTGG	2 cut(s)	2164, 2196
Alw21I	GWGCWC	4 cut(s)	131, 746, 1685, 2403
AlwI	GGATC	4 cut(s)	25, 777, 790, 2022
AlwNI	CAGNNNCTG	2 cut(s)	2347, 2390
Ama87I	CYCGRG	2 cut(s)	1734, 2081
Aor13HI	TCCGGA	1 cut(s)	2514
AoxI	GGCC	5 cut(s)	358, 824, 2466, 2561, 2589
ApoI	RAATTY	6 cut(s)	258, 589, 1023, 1205, 1742, 2161
ArsI	GACNNNNNNTTYG	4 cut(s)	201, 233, 2518, 2550
AseI	ATTAAT	1 cut(s)	792
Asp700I	GAANNNNTTC	2 cut(s)	1354, 2072
Asp718I	GGTACC	1 cut(s)	1729
AspLEI	GCGC	3 cut(s)	419, 1003, 2269
AspS9I	GGNCC	3 cut(s)	204, 359, 2561
AsuC2I	CCSGG	1 cut(s)	1007
AsuHPI	GGTGA	6 cut(s)	451, 503, 701, 1322, 1992, 2528
AsuII	TTCGAA	1 cut(s)	2076
AvaI	CYCGRG	2 cut(s)	1734, 2081
AvaII	GGWCC	1 cut(s)	204
BaeGI	GKGCMC	1 cut(s)	1855
BalI	TGGCCA	1 cut(s)	2591
BamHI	GGATCC	1 cut(s)	782
BanI	GGYRCC	1 cut(s)	1729
BanII	GRGCYC	4 cut(s)	131, 746, 1685, 2403
BbsI	GAAGAC	3 cut(s)	479, 1357, 1502
Bbv12I	GWGCWC	4 cut(s)	131, 746, 1685, 2403
BbvCI	CCTCAGC	1 cut(s)	2383
BccI	CCATC	9 cut(s)	287, 334, 845, 1193, 1324, 1618, 1696, 2801, 2814
BciT130I	CCWGG	3 cut(s)	507, 1338, 1748
BclI	TGATCA	2 cut(s)	493, 1786
BcnI	CCSGG	1 cut(s)	1007
BcuI	ACTAGT	2 cut(s)	1571, 1601
BfaI	CTAG	4 cut(s)	812, 1572, 1602, 2453
BfmI	CTRYAG	3 cut(s)	618, 874, 1713
BfoI	RGCGCY	2 cut(s)	420, 2270
BglII	AGATCT	1 cut(s)	2085
BlpI	GCTNAGC	4 cut(s)	399, 914, 2460, 2655
BmcAI	AGTACT	1 cut(s)	167
Bme1390I	CCNGG	4 cut(s)	507, 1007, 1338, 1748
Bme18I	GGWCC	1 cut(s)	204
BmeT110I	CYCGRG	2 cut(s)	1734, 2081
BmgT120I	GGNCC	3 cut(s)	204, 359, 2561
BmiI	GGNNCC	3 cut(s)	784, 1731, 2339
BmrFI	CCNGG	4 cut(s)	507, 1007, 1338, 1748
BmrI	ACTGGG	1 cut(s)	1657
BmuI	ACTGGG	1 cut(s)	1657
BpiI	GAAGAC	3 cut(s)	479, 1357, 1502
BpmI	CTGGAG	2 cut(s)	1848, 2171
Bpu10I	CCTNAGC	2 cut(s)	612, 2383
Bpu1102I	GCTNAGC	4 cut(s)	399, 914, 2460, 2655
Bpu14I	TTCGAA	1 cut(s)	2076
BpuEI	CTTGAG	6 cut(s)	813, 1469, 1605, 2179, 2291, 2387
BpuMI	CCSGG	1 cut(s)	1007
Bsa29I	ATCGAT	1 cut(s)	1794
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	1300, 2786
BsaJI	CCNNGG	4 cut(s)	251, 265, 1733, 1747
BsaWI	WCCGGW	1 cut(s)	2514
BsaXI	ACNNNNNCTCC	2 cut(s)	937, 967
Bsc4I	CCNNNNNNNGG	6 cut(s)	468, 673, 1451, 1894, 2177, 2347
Bse1I	ACTGG	8 cut(s)	525, 766, 1526, 1584, 1663, 2154, 2352, 2592
BseAI	TCCGGA	1 cut(s)	2514
BseBI	CCWGG	3 cut(s)	507, 1338, 1748
BseCI	ATCGAT	1 cut(s)	1794
BseDI	CCNNGG	4 cut(s)	251, 265, 1733, 1747
BseGI	GGATG	5 cut(s)	546, 613, 856, 1423, 2825
BseLI	CCNNNNNNNGG	6 cut(s)	468, 673, 1451, 1894, 2177, 2347
BseNI	ACTGG	8 cut(s)	525, 766, 1526, 1584, 1663, 2154, 2352, 2592
BseRI	GAGGAG	3 cut(s)	1385, 1434, 1886
BseSI	GKGCMC	1 cut(s)	1855
BseYI	CCCAGC	1 cut(s)	2490
BsgI	GTGCAG	1 cut(s)	928
Bsh1285I	CGRYCG	2 cut(s)	26, 349
BshFI	GGCC	5 cut(s)	360, 826, 2468, 2563, 2591
BshNI	GGYRCC	1 cut(s)	1729
BshVI	ATCGAT	1 cut(s)	1794
BsiEI	CGRYCG	2 cut(s)	26, 349
BsiHKAI	GWGCWC	4 cut(s)	131, 746, 1685, 2403
BsiHKCI	CYCGRG	2 cut(s)	1734, 2081
BsiSI	CCGG	2 cut(s)	1006, 2515
BslFI	GGGAC	3 cut(s)	1415, 1570, 1764
BslI	CCNNNNNNNGG	6 cut(s)	468, 673, 1451, 1894, 2177, 2347
BsmBI	CGTCTC	1 cut(s)	971
BsmFI	GGGAC	3 cut(s)	1415, 1570, 1764
BsmI	GAATGC	2 cut(s)	2099, 2224
BsnI	GGCC	5 cut(s)	360, 826, 2468, 2563, 2591
Bso31I	GGTCTC	2 cut(s)	1300, 2786
BsoBI	CYCGRG	2 cut(s)	1734, 2081
Bsp119I	TTCGAA	1 cut(s)	2076
Bsp1286I	GDGCHC	5 cut(s)	131, 746, 1685, 1855, 2403
Bsp13I	TCCGGA	1 cut(s)	2514
Bsp1720I	GCTNAGC	4 cut(s)	399, 914, 2460, 2655
BspACI	CCGC	9 cut(s)	197, 310, 468, 918, 1399, 1877, 2210, 2469, 2624
BspANI	GGCC	5 cut(s)	360, 826, 2468, 2563, 2591
BspDI	ATCGAT	1 cut(s)	1794
BspEI	TCCGGA	1 cut(s)	2514
BspHI	TCATGA	1 cut(s)	2433
BspLI	GGNNCC	3 cut(s)	784, 1731, 2339
BspPI	GGATC	4 cut(s)	25, 777, 790, 2022
BspT104I	TTCGAA	1 cut(s)	2076
BspT107I	GGYRCC	1 cut(s)	1729
BspTNI	GGTCTC	2 cut(s)	1300, 2786
BsrI	ACTGG	8 cut(s)	525, 766, 1526, 1584, 1663, 2154, 2352, 2592
BssECI	CCNNGG	4 cut(s)	251, 265, 1733, 1747
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	251, 265
Bst2UI	CCWGG	3 cut(s)	507, 1338, 1748
Bst6I	CTCTTC	6 cut(s)	969, 1098, 1362, 2521, 2573, 2641
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstBI	TTCGAA	1 cut(s)	2076
BstC8I	GCNNGC	5 cut(s)	1159, 1377, 2208, 2265, 2466
BstEII	GGTNACC	1 cut(s)	457
BstF5I	GGATG	5 cut(s)	546, 613, 856, 1423, 2825
BstH2I	RGCGCY	2 cut(s)	420, 2270
BstHHI	GCGC	3 cut(s)	419, 1003, 2269
BstMCI	CGRYCG	2 cut(s)	26, 349
BstMWI	GCNNNNNNNGC	6 cut(s)	287, 316, 1007, 1250, 2387, 2465
BstNI	CCWGG	3 cut(s)	507, 1338, 1748
BstNSI	RCATGY	3 cut(s)	407, 2210, 2725
BstPI	GGTNACC	1 cut(s)	457
BstSCI	CCNGG	4 cut(s)	505, 1005, 1336, 1746
BstSFI	CTRYAG	3 cut(s)	618, 874, 1713
BstSLI	GKGCMC	1 cut(s)	1855
BstV2I	GAAGAC	3 cut(s)	479, 1357, 1502
BstX2I	RGATCY	2 cut(s)	782, 2085
BstXI	CCANNNNNNTGG	1 cut(s)	2011
BstYI	RGATCY	2 cut(s)	782, 2085
Bsu15I	ATCGAT	1 cut(s)	1794
BsuRI	GGCC	5 cut(s)	360, 826, 2468, 2563, 2591
BsuTUI	ATCGAT	1 cut(s)	1794
BtsCI	GGATG	5 cut(s)	546, 613, 856, 1423, 2825
BtsI	GCAGTG	1 cut(s)	2229
BtsIMutI	CAGTG	8 cut(s)	228, 518, 633, 945, 1591, 2147, 2229, 2563
Cac8I	GCNNGC	5 cut(s)	1159, 1377, 2208, 2265, 2466
CaiI	CAGNNNCTG	2 cut(s)	2347, 2390
CciI	TCATGA	1 cut(s)	2433
CfoI	GCGC	3 cut(s)	419, 1003, 2269
Cfr13I	GGNCC	3 cut(s)	204, 359, 2561
ClaI	ATCGAT	1 cut(s)	1794
CseI	GACGC	2 cut(s)	988, 2483
CsiI	ACCWGGT	1 cut(s)	1336
Csp6I	GTAC	3 cut(s)	166, 438, 1730
CviQI	GTAC	3 cut(s)	166, 438, 1730
DraI	TTTAAA	1 cut(s)	1098
EaeI	YGGCCR	2 cut(s)	2466, 2589
Eam1104I	CTCTTC	6 cut(s)	969, 1098, 1362, 2521, 2573, 2641
EarI	CTCTTC	6 cut(s)	969, 1098, 1362, 2521, 2573, 2641
Ecl136II	GAGCTC	4 cut(s)	129, 744, 1683, 2401
Eco130I	CCWWGG	2 cut(s)	251, 265
Eco147I	AGGCCT	1 cut(s)	826
Eco24I	GRGCYC	4 cut(s)	131, 746, 1685, 2403
Eco31I	GGTCTC	2 cut(s)	1300, 2786
Eco47I	GGWCC	1 cut(s)	204
Eco53kI	GAGCTC	4 cut(s)	129, 744, 1683, 2401
Eco57I	CTGAAG	4 cut(s)	129, 1877, 2147, 2306
Eco88I	CYCGRG	2 cut(s)	1734, 2081
Eco91I	GGTNACC	1 cut(s)	457
EcoICRI	GAGCTC	4 cut(s)	129, 744, 1683, 2401
EcoO65I	GGTNACC	1 cut(s)	457
EcoRII	CCWGG	3 cut(s)	505, 1336, 1746
EcoT14I	CCWWGG	2 cut(s)	251, 265
EcoT22I	ATGCAT	2 cut(s)	343, 489
EcoT38I	GRGCYC	4 cut(s)	131, 746, 1685, 2403
ErhI	CCWWGG	2 cut(s)	251, 265
Esp3I	CGTCTC	1 cut(s)	971
FalI	AAGNNNNNCTT	4 cut(s)	1359, 1391, 2235, 2267
FaqI	GGGAC	3 cut(s)	1415, 1570, 1764
FauI	CCCGC	3 cut(s)	461, 1392, 2203
FauNDI	CATATG	4 cut(s)	337, 451, 2365, 2617
FbaI	TGATCA	2 cut(s)	493, 1786
FblI	GTMKAC	1 cut(s)	632
FokI	GGATG	4 cut(s)	533, 620, 863, 1430
FriOI	GRGCYC	4 cut(s)	131, 746, 1685, 2403
FspBI	CTAG	4 cut(s)	812, 1572, 1602, 2453
FspI	TGCGCA	1 cut(s)	1002
GlaI	GCGC	3 cut(s)	418, 1002, 2268
GsaI	CCCAGC	1 cut(s)	2494
GsuI	CTGGAG	2 cut(s)	1848, 2171
HaeII	RGCGCY	2 cut(s)	420, 2270
HaeIII	GGCC	5 cut(s)	360, 826, 2468, 2563, 2591
HapII	CCGG	2 cut(s)	1006, 2515
HgaI	GACGC	2 cut(s)	988, 2483
HhaI	GCGC	3 cut(s)	419, 1003, 2269
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	3 cut(s)	417, 1001, 2267
HinP1I	GCGC	3 cut(s)	417, 1001, 2267
HincII	GTYRAC	4 cut(s)	433, 846, 1278, 1607
HindII	GTYRAC	4 cut(s)	433, 846, 1278, 1607
HpaII	CCGG	2 cut(s)	1006, 2515
HphI	GGTGA	6 cut(s)	451, 503, 701, 1322, 1992, 2528
Hpy166II	GTNNAC	6 cut(s)	242, 433, 633, 846, 1278, 1607
Hpy8I	GTNNAC	6 cut(s)	242, 433, 633, 846, 1278, 1607
Hpy99I	CGWCG	1 cut(s)	2499
HpyF10VI	GCNNNNNNNGC	6 cut(s)	287, 316, 1007, 1250, 2387, 2465
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	3 cut(s)	417, 1001, 2267
Kpn2I	TCCGGA	1 cut(s)	2514
KpnI	GGTACC	1 cut(s)	1733
Ksp22I	TGATCA	2 cut(s)	493, 1786
LmnI	GCTCC	2 cut(s)	1372, 2759
MabI	ACCWGGT	1 cut(s)	1336
MaeI	CTAG	4 cut(s)	812, 1572, 1602, 2453
MaeIII	GTNAC	8 cut(s)	217, 223, 457, 949, 1059, 1132, 2504, 2534
MfeI	CAATTG	3 cut(s)	710, 1782, 2057
MflI	RGATCY	2 cut(s)	782, 2085
MhlI	GDGCHC	5 cut(s)	131, 746, 1685, 1855, 2403
MlsI	TGGCCA	1 cut(s)	2591
MluNI	TGGCCA	1 cut(s)	2591
MlyI	GAGTC	8 cut(s)	438, 469, 808, 1492, 2176, 2186, 2321, 2542
Mox20I	TGGCCA	1 cut(s)	2591
Mph1103I	ATGCAT	2 cut(s)	343, 489
MroI	TCCGGA	1 cut(s)	2514
MroXI	GAANNNNTTC	2 cut(s)	1354, 2072
MscI	TGGCCA	1 cut(s)	2591
MseI	TTAA	9 cut(s)	561, 792, 992, 1097, 1517, 1526, 1802, 1904, 1925
MslI	CAYNNNNRTG	5 cut(s)	384, 927, 1848, 2009, 2238
Msp20I	TGGCCA	1 cut(s)	2591
MspA1I	CMGCKG	2 cut(s)	468, 2387
MspI	CCGG	2 cut(s)	1006, 2515
MspR9I	CCNGG	4 cut(s)	507, 1007, 1338, 1748
MunI	CAATTG	3 cut(s)	710, 1782, 2057
Mva1269I	GAATGC	2 cut(s)	2099, 2224
MvaI	CCWGG	3 cut(s)	507, 1338, 1748
MwoI	GCNNNNNNNGC	6 cut(s)	287, 316, 1007, 1250, 2387, 2465
NciI	CCSGG	1 cut(s)	1007
NdeI	CATATG	4 cut(s)	337, 451, 2365, 2617
NlaIV	GGNNCC	3 cut(s)	784, 1731, 2339
NmuCI	GTSAC	6 cut(s)	217, 223, 457, 949, 1059, 2534
NsbI	TGCGCA	1 cut(s)	1002
NsiI	ATGCAT	2 cut(s)	343, 489
NspI	RCATGY	3 cut(s)	407, 2210, 2725
NspV	TTCGAA	1 cut(s)	2076
PaeI	GCATGC	1 cut(s)	2210
PaeR7I	CTCGAG	1 cut(s)	2081
PagI	TCATGA	1 cut(s)	2433
PceI	AGGCCT	1 cut(s)	826
PciI	ACATGT	1 cut(s)	2721
PcsI	WCGNNNNNNNCGW	1 cut(s)	2088
PctI	GAATGC	2 cut(s)	2099, 2224
PdmI	GAANNNNTTC	2 cut(s)	1354, 2072
PflFI	GACNNNGTC	2 cut(s)	1338, 2311
PflMI	CCANNNNNTGG	1 cut(s)	2347
Ple19I	CGATCG	1 cut(s)	349
PleI	GAGTC	8 cut(s)	437, 469, 807, 1492, 2175, 2186, 2320, 2541
PpsI	GAGTC	8 cut(s)	437, 469, 807, 1492, 2175, 2186, 2320, 2541
PscI	ACATGT	1 cut(s)	2721
PshBI	ATTAAT	1 cut(s)	792
Psp124BI	GAGCTC	4 cut(s)	131, 746, 1685, 2403
Psp6I	CCWGG	3 cut(s)	505, 1336, 1746
PspEI	GGTNACC	1 cut(s)	457
PspFI	CCCAGC	1 cut(s)	2490
PspGI	CCWGG	3 cut(s)	505, 1336, 1746
PspN4I	GGNNCC	3 cut(s)	784, 1731, 2339
PspPI	GGNCC	3 cut(s)	204, 359, 2561
PstNI	CAGNNNCTG	2 cut(s)	2347, 2390
PsuI	RGATCY	2 cut(s)	782, 2085
PsyI	GACNNNGTC	2 cut(s)	1338, 2311
PvuI	CGATCG	1 cut(s)	349
PvuII	CAGCTG	1 cut(s)	2387
RsaI	GTAC	3 cut(s)	167, 439, 1731
RsaNI	GTAC	3 cut(s)	166, 438, 1730
RseI	CAYNNNNRTG	5 cut(s)	384, 927, 1848, 2009, 2238
SacI	GAGCTC	4 cut(s)	131, 746, 1685, 2403
SaqAI	TTAA	9 cut(s)	561, 792, 992, 1097, 1517, 1526, 1802, 1904, 1925
Sau96I	GGNCC	3 cut(s)	204, 359, 2561
ScaI	AGTACT	1 cut(s)	167
SchI	GAGTC	8 cut(s)	438, 469, 808, 1492, 2176, 2186, 2321, 2542
ScrFI	CCNGG	4 cut(s)	507, 1007, 1338, 1748
SduI	GDGCHC	5 cut(s)	131, 746, 1685, 1855, 2403
SexAI	ACCWGGT	1 cut(s)	1336
SfcI	CTRYAG	3 cut(s)	618, 874, 1713
Sfr274I	CTCGAG	1 cut(s)	2081
SfuI	TTCGAA	1 cut(s)	2076
SinI	GGWCC	1 cut(s)	204
SlaI	CTCGAG	1 cut(s)	2081
SmiMI	CAYNNNNRTG	5 cut(s)	384, 927, 1848, 2009, 2238
SmlI	CTYRAG	7 cut(s)	828, 1448, 1620, 2081, 2194, 2270, 2402
SmoI	CTYRAG	7 cut(s)	828, 1448, 1620, 2081, 2194, 2270, 2402
SpeI	ACTAGT	2 cut(s)	1571, 1601
SphI	GCATGC	1 cut(s)	2210
SseBI	AGGCCT	1 cut(s)	826
SsiI	CCGC	9 cut(s)	197, 310, 468, 918, 1399, 1877, 2210, 2469, 2624
SspI	AATATT	2 cut(s)	101, 1639
SspMI	CTAG	4 cut(s)	812, 1572, 1602, 2453
SstI	GAGCTC	4 cut(s)	131, 746, 1685, 2403
StuI	AGGCCT	1 cut(s)	826
StyD4I	CCNGG	4 cut(s)	505, 1005, 1336, 1746
StyI	CCWWGG	2 cut(s)	251, 265
TatI	WGTACW	1 cut(s)	165
TauI	GCSGC	3 cut(s)	1880, 2471, 2627
Tru1I	TTAA	9 cut(s)	561, 792, 992, 1097, 1517, 1526, 1802, 1904, 1925
Tru9I	TTAA	9 cut(s)	561, 792, 992, 1097, 1517, 1526, 1802, 1904, 1925
TscAI	CASTG	8 cut(s)	228, 525, 633, 952, 1591, 2154, 2229, 2563
TseFI	GTSAC	6 cut(s)	217, 223, 457, 949, 1059, 2534
Tsp45I	GTSAC	6 cut(s)	217, 223, 457, 949, 1059, 2534
TspGWI	ACGGA	6 cut(s)	57, 191, 863, 1549, 1914, 2648
TspRI	CASTG	8 cut(s)	228, 525, 633, 952, 1591, 2154, 2229, 2563
Tth111I	GACNNNGTC	2 cut(s)	1338, 2311
Van91I	CCANNNNNTGG	1 cut(s)	2347
VpaK11BI	GGWCC	1 cut(s)	204
VspI	ATTAAT	1 cut(s)	792
XapI	RAATTY	6 cut(s)	258, 589, 1023, 1205, 1742, 2161
XceI	RCATGY	3 cut(s)	407, 2210, 2725
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2498
XhoI	CTCGAG	1 cut(s)	2081
XmiI	GTMKAC	1 cut(s)	632
XmnI	GAANNNNTTC	2 cut(s)	1354, 2072
XspI	CTAG	4 cut(s)	812, 1572, 1602, 2453
ZrmI	AGTACT	1 cut(s)	167
Zsp2I	ATGCAT	2 cut(s)	343, 489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.