Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0002243

Physical Location & Seq

Genomic Coordinates Forward (+)

24358031 .. 24371524

Gene Structure 13494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG250700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGGCGTCAAAACATGGATCACGATCGAAAAAACTAGGTTCCAGCAATTCGAGAGCTGCTAATTCTCCTTCATCTTCGACTACATCGTCTTCAAAACAATATTTGGAAACTTCTATTGAAGGGCAGAGCTCTCCTGCATCTTCTTCAGCTCGAAGTAAGCCACAGTACTTTTACACGGAAAGTTTGCCACAAGATGCGGAAAGGTCCAAAGAAAATGTCACAGTGACGGTCCGCTTTCGTCCACTCAGTCCAAGGGAAATTCGCCAAGGAGAAGAAATTGCATGGTATGCAGATGGAGACACTATTCTGCGGAATGAGCATAATCCATCAATAGCTTATGCATACGATCGGGTGTTTGGCCCTACAACCACAACACGCCATGTCTATGATGTTGCTGCTCAGCATGTTGTTAGTGGCGCTATGGAAGGAGTCAACGGTACAATTTTTGCATATGGGGTCACCAGCAGCGGGAAGACTCACACAATGCATGGTGATCAAAGGTCGCCTGGAATTATACCACTGGCTGTGAAAGATGCGTTTAGCATCATCCAAGAGACTCCAAACCGAGAGTTTCTTCTTCGTGTGTCATACTTGGAGATCTATAATGAGGTTGTTAATGACTTGTTGAATCCAGCAGGACAGAATTTACGAATTAGAGAGGATGCTCAGGGCACATTTGTTGAAGGAATAAAGGAAGAAGTAGTGCTATCCCCAGCTCATGCCCTGTCACTTATAGCAGCTGGAGAAGAGCACAGGCATGTTGGATCAACAAATTTCAATTTACTCAGTAGCAGGAGCCATACTATATTTACACTGACAATCGAGAGTAGCCCGTGTGGGGAAAATAGTGAAGGTGAAGCTGTAAATCTGTCGCAATTGAACCTCATTGATCTGGCTGGTTCTGAGAGCTCAAAAGCTGAAACTACTGGTGTCAGACGAAAAGAAGGATCCTATATTAATAAGAGTCTGCTAACTCTAGGAACTGTTATATCAAAGTTGACGGATGGGAGGGCTACTCATATACCCTACAGGGATTCTAAATTGACCCGACTTCTCCAATCTTCGCTAAGCGGTCATGGGCGTGTCTCTCTCATCTGCACTGTTACTCCTTCATCAAGCAGTTCAGAAGAGACGCATAATACATTAAAGTTTGCGCACCGGGCAAAGCACATTGAAATTCAAGCAGCACAAAATAAGATTATTGATGAGAAGTCACTTATCAAGAAATATCAAAATGAGATTCGTAATTTAAAGGAAGAGTTAGAACAGTTGAAGAAGGGTATTGTTACAGTTCCTCAACTAAAAGATGCTAGCGAAAATGATATTCTGCTTCTAAAACAAAAGTTAGAAGATGGCAAATTCAAACTGCAATCAAGATTGGAACAAGAGGAAGAAGCCAAAGCTGCTTTGTTAGGAAGAATCCAAAGGTTGACAAAGTTGATTTTGGTCTCCACAAAAGCAACACAGCCATCAAGGTTTCCTCACCGACCTGGTCTTAGAAGAAGACATTCCTTTGGGGAAGAGGAGCTTGCATATCTACCATACAAAAGGCGGGACTTGATTTTAGAGGATGAAAACATTGACTTGTTTGTTTCTCCTCTTGAGGGGAATACTGAAACTGCTGATGCGCTGAAGGAGGATAAGAAGACTCGGAAGCATGGACTGTTAAACTGGTTAAAACTACGGAAACGAGATAGTGGTGGTGGGACATTGACAAGCACTAGTGATAAATCCAGTGGAATGAAATCTACTAGTCAACCATCAACACCTCAAGCAGAAAATAGTAATTTTCATGCAGAATCGAGGCTTTCCCATTCTCTACTTACAGAGAGCTCTCCATCTGCTGATCTTTTGACTGATGCTATAGAGGATAGAGAGGTACCTCAGGATAAATTCCTGGGACAAGAGACACCTACGACCAGCATAAAATCAATTGATCTATTAAGAGAGCAGCAAAAAATCTTGTCCGGAGAGGTAGCACTCCATTCAAGTGCACTGAAGCGTTTGTCTGAGGAGGCGGCAAAAAACCCCCAGAAGGACGGATTAAATATGGAGATGCGAAAGTTAAAAGATGAAATCAAGGCGAAGAATGAACAAATAGCTCTGCTGGAAAAGAAAATTGCCGATTCGTTGATTGTTTCACCCACCAAAATGGATCAAATCGAAATATCCCAATCTATTGCCGAAGTGGTGGCACAATTGAATGAGAAGTCCTTCGAACTCGAGGTGATAAATACTTACTACATTTTGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

751

Amino Acids

83.25

Weight (kDa)

6.9

Isoelectric Point (pI)

57.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	72 - 209	3.3e-19	Microtubule binding
Kinesin	PF00225	78 - 391	3e-106	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12020 AT3G12020 AT3G12020 AT3G12020 AT5G06670 AT5G06670 AT5G06670 AT5G06670
fragaria_vesca	FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780 FvH4_6g21780
malus_domestica	MD12G1054300.v1.1 MD14G1053100.v1.1
prunus_persica	Prupe.7G082400_v2.0.a1
pyrus_communis	pycom12g04730 pycom14g04410
rosa_chinensis	RchiOBHm_Chr3g0479141
rosa_laevigata	RLG00000023604
rosa_multiflora	Rmu_co8049936.1_g000001 Rmu_co8383491.1_g000001 Rmu_sc0002555.1_g000005
rosa_roxburghii	Rroxscaffold_6G00402700
rosa_rugosa	Rorug03G0171300 Rorug03G0171400
rosa_samantha	Rh3AG222600 Rh3BG255100 Rh3CG250700 Rh3DG247100 Rh6AG090700 Rh6BG153100 Rh6CG078500 Rh6DG074300 Rh6DG137500
rosa_wichuraiana	Rw0G001170 Rw1G014040 Rw3G019950 Rw6G024570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	85
Acc16I	TGCGCA	1 cut(s)	1155
Acc65I	GGTACC	1 cut(s)	1879
AccB1I	GGYRCC	1 cut(s)	1879
AccIII	TCCGGA	1 cut(s)	1967
AciI	CCGC	7 cut(s)	197, 232, 310, 468, 1071, 1552, 2018
AclWI	GGATC	5 cut(s)	25, 772, 942, 955, 2163
AcsI	RAATTY	6 cut(s)	258, 643, 772, 1176, 1358, 1892
AcuI	CTGAAG	3 cut(s)	129, 1652, 2018
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	167, 439, 1881
AfiI	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2035
AhlI	ACTAGT	2 cut(s)	1721, 1751
AjnI	CCWGG	3 cut(s)	505, 1489, 1896
Alw21I	GWGCWC	5 cut(s)	131, 753, 911, 1835, 1996
Alw26I	GTCTC	6 cut(s)	291, 548, 1090, 1124, 1453, 1901
Alw44I	GTGCAC	1 cut(s)	1992
AlwI	GGATC	5 cut(s)	25, 772, 942, 955, 2163
Ama87I	CYCGRG	1 cut(s)	2222
Aor13HI	TCCGGA	1 cut(s)	1967
AoxI	GGCC	1 cut(s)	358
ApaLI	GTGCAC	1 cut(s)	1992
ApeKI	GCWGC	7 cut(s)	56, 395, 465, 737, 1184, 1403, 1951
ApoI	RAATTY	6 cut(s)	258, 643, 772, 1176, 1358, 1892
ArsI	GACNNNNNNTTYG	2 cut(s)	201, 233
AseI	ATTAAT	1 cut(s)	957
Asp700I	GAANNNNTTC	2 cut(s)	1507, 2213
Asp718I	GGTACC	1 cut(s)	1879
AspLEI	GCGC	3 cut(s)	419, 1156, 1630
AspS9I	GGNCC	3 cut(s)	204, 229, 359
AsuC2I	CCSGG	1 cut(s)	1160
AsuHPI	GGTGA	6 cut(s)	451, 503, 866, 1475, 2133, 2239
AsuII	TTCGAA	1 cut(s)	2217
AsuNHI	GCTAGC	1 cut(s)	1310
AvaI	CYCGRG	1 cut(s)	2222
AvaII	GGWCC	2 cut(s)	204, 229
AxyI	CCTNAGG	1 cut(s)	1884
BaeGI	GKGCMC	2 cut(s)	674, 1996
BamHI	GGATCC	1 cut(s)	947
BanI	GGYRCC	1 cut(s)	1879
BanII	GRGCYC	3 cut(s)	131, 911, 1835
BbsI	GAAGAC	4 cut(s)	81, 479, 1510, 1652
Bbv12I	GWGCWC	5 cut(s)	131, 753, 911, 1835, 1996
BbvI	GCAGC	7 cut(s)	43, 382, 477, 749, 1196, 1390, 1963
BccI	CCATC	7 cut(s)	287, 334, 998, 1346, 1477, 1768, 1846
BciT130I	CCWGG	3 cut(s)	507, 1491, 1898
BclI	TGATCA	1 cut(s)	493
BcnI	CCSGG	1 cut(s)	1160
BcoDI	GTCTC	6 cut(s)	291, 548, 1090, 1124, 1453, 1901
BcuI	ACTAGT	2 cut(s)	1721, 1751
BfaI	CTAG	5 cut(s)	35, 977, 1311, 1722, 1752
BfmI	CTRYAG	2 cut(s)	1027, 1863
BfoI	RGCGCY	1 cut(s)	420
BglII	AGATCT	1 cut(s)	597
BisI	GCNGC	8 cut(s)	57, 396, 466, 738, 1185, 1404, 1952, 2019
BlpI	GCTNAGC	2 cut(s)	399, 1067
BlsI	GCNGC	8 cut(s)	58, 397, 467, 739, 1186, 1405, 1953, 2020
BmcAI	AGTACT	1 cut(s)	167
Bme1390I	CCNGG	4 cut(s)	507, 1160, 1491, 1898
Bme18I	GGWCC	2 cut(s)	204, 229
BmeT110I	CYCGRG	1 cut(s)	2222
BmgT120I	GGNCC	3 cut(s)	204, 229, 359
BmiI	GGNNCC	4 cut(s)	40, 797, 949, 1881
BmrFI	CCNGG	4 cut(s)	507, 1160, 1491, 1898
BmsI	GCATC	9 cut(s)	146, 184, 523, 552, 652, 1297, 1615, 1849, 2046
BmtI	GCTAGC	1 cut(s)	1314
BpiI	GAAGAC	4 cut(s)	81, 479, 1510, 1652
BplI	GAGNNNNNCTC	2 cut(s)	1000, 1032
BpmI	CTGGAG	1 cut(s)	762
Bpu10I	CCTNAGC	1 cut(s)	666
Bpu1102I	GCTNAGC	2 cut(s)	399, 1067
Bpu14I	TTCGAA	1 cut(s)	2217
BpuEI	CTTGAG	2 cut(s)	1622, 1755
BpuMI	CCSGG	1 cut(s)	1160
BsaBI	GATNNNNATC	1 cut(s)	22
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1453
BsaJI	CCNNGG	3 cut(s)	251, 265, 1897
BsaWI	WCCGGW	1 cut(s)	1967
BsaXI	ACNNNNNCTCC	2 cut(s)	1090, 1120
Bsc4I	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2035
Bse1I	ACTGG	4 cut(s)	525, 931, 1676, 1734
Bse21I	CCTNAGG	1 cut(s)	1884
Bse8I	GATNNNNATC	1 cut(s)	22
BseAI	TCCGGA	1 cut(s)	1967
BseBI	CCWGG	3 cut(s)	507, 1491, 1898
BseDI	CCNNGG	3 cut(s)	251, 265, 1897
BseGI	GGATG	4 cut(s)	546, 667, 1009, 1576
BseJI	GATNNNNATC	1 cut(s)	22
BseLI	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2035
BseMII	CTCAG	7 cut(s)	259, 413, 680, 799, 894, 1898, 2001
BseNI	ACTGG	4 cut(s)	525, 931, 1676, 1734
BseRI	GAGGAG	3 cut(s)	1538, 1587, 2027
BseSI	GKGCMC	2 cut(s)	674, 1996
BseXI	GCAGC	7 cut(s)	43, 382, 477, 749, 1196, 1390, 1963
BseYI	CCCAGC	1 cut(s)	712
BsgI	GTGCAG	1 cut(s)	1081
Bsh1285I	CGRYCG	2 cut(s)	26, 349
BshFI	GGCC	1 cut(s)	360
BshNI	GGYRCC	1 cut(s)	1879
BsiEI	CGRYCG	2 cut(s)	26, 349
BsiHKAI	GWGCWC	5 cut(s)	131, 753, 911, 1835, 1996
BsiHKCI	CYCGRG	1 cut(s)	2222
BsiSI	CCGG	2 cut(s)	1159, 1968
BslFI	GGGAC	3 cut(s)	1568, 1720, 1914
BslI	CCNNNNNNNGG	4 cut(s)	468, 838, 1604, 2035
BsmAI	GTCTC	6 cut(s)	291, 548, 1090, 1124, 1453, 1901
BsmBI	CGTCTC	1 cut(s)	1124
BsmFI	GGGAC	3 cut(s)	1568, 1720, 1914
BsnI	GGCC	1 cut(s)	360
Bso31I	GGTCTC	1 cut(s)	1453
BsoBI	CYCGRG	1 cut(s)	2222
Bsp119I	TTCGAA	1 cut(s)	2217
Bsp1286I	GDGCHC	6 cut(s)	131, 674, 753, 911, 1835, 1996
Bsp13I	TCCGGA	1 cut(s)	1967
Bsp1720I	GCTNAGC	2 cut(s)	399, 1067
BspACI	CCGC	7 cut(s)	197, 232, 310, 468, 1071, 1552, 2018
BspANI	GGCC	1 cut(s)	360
BspCNI	CTCAG	7 cut(s)	258, 412, 679, 798, 895, 1897, 2002
BspEI	TCCGGA	1 cut(s)	1967
BspLI	GGNNCC	4 cut(s)	40, 797, 949, 1881
BspOI	GCTAGC	1 cut(s)	1314
BspPI	GGATC	5 cut(s)	25, 772, 942, 955, 2163
BspQI	GCTCTTC	1 cut(s)	741
BspT104I	TTCGAA	1 cut(s)	2217
BspT107I	GGYRCC	1 cut(s)	1879
BspTNI	GGTCTC	1 cut(s)	1453
BsrI	ACTGG	4 cut(s)	525, 931, 1676, 1734
BssECI	CCNNGG	3 cut(s)	251, 265, 1897
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	251, 265
Bst2UI	CCWGG	3 cut(s)	507, 1491, 1898
Bst4CI	ACNGT	9 cut(s)	165, 223, 229, 437, 985, 1102, 1269, 1291, 1665
Bst6I	CTCTTC	4 cut(s)	741, 1122, 1251, 1515
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstBI	TTCGAA	1 cut(s)	2217
BstC8I	GCNNGC	2 cut(s)	1312, 1530
BstDEI	CTNAG	9 cut(s)	245, 399, 666, 785, 903, 1067, 1496, 1884, 2010
BstEII	GGTNACC	1 cut(s)	457
BstF5I	GGATG	4 cut(s)	546, 667, 1009, 1576
BstH2I	RGCGCY	1 cut(s)	420
BstHHI	GCGC	3 cut(s)	419, 1156, 1630
BstMAI	GTCTC	6 cut(s)	291, 548, 1090, 1124, 1453, 1901
BstMCI	CGRYCG	2 cut(s)	26, 349
BstMWI	GCNNNNNNNGC	4 cut(s)	287, 316, 1160, 1403
BstNI	CCWGG	3 cut(s)	507, 1491, 1898
BstNSI	RCATGY	2 cut(s)	407, 761
BstPI	GGTNACC	1 cut(s)	457
BstSCI	CCNGG	4 cut(s)	505, 1158, 1489, 1896
BstSFI	CTRYAG	2 cut(s)	1027, 1863
BstSLI	GKGCMC	2 cut(s)	674, 1996
BstV1I	GCAGC	7 cut(s)	43, 382, 477, 749, 1196, 1390, 1963
BstV2I	GAAGAC	4 cut(s)	81, 479, 1510, 1652
BstX2I	RGATCY	2 cut(s)	597, 947
BstXI	CCANNNNNNTGG	1 cut(s)	2152
BstYI	RGATCY	2 cut(s)	597, 947
Bsu36I	CCTNAGG	1 cut(s)	1884
BsuRI	GGCC	1 cut(s)	360
BtsCI	GGATG	4 cut(s)	546, 667, 1009, 1576
BtsIMutI	CAGTG	6 cut(s)	228, 518, 812, 1098, 1741, 1994
Cac8I	GCNNGC	2 cut(s)	1312, 1530
CfoI	GCGC	3 cut(s)	419, 1156, 1630
Cfr13I	GGNCC	3 cut(s)	204, 229, 359
CpoI	CGGWCCG	1 cut(s)	229
CseI	GACGC	1 cut(s)	1141
CsiI	ACCWGGT	1 cut(s)	1489
Csp6I	GTAC	3 cut(s)	166, 438, 1880
CspI	CGGWCCG	1 cut(s)	229
CviQI	GTAC	3 cut(s)	166, 438, 1880
DdeI	CTNAG	9 cut(s)	245, 399, 666, 785, 903, 1067, 1496, 1884, 2010
DraI	TTTAAA	1 cut(s)	1251
DrdI	GACNNNNNNGTC	1 cut(s)	85
DseDI	GACNNNNNNGTC	1 cut(s)	85
Eam1104I	CTCTTC	4 cut(s)	741, 1122, 1251, 1515
EarI	CTCTTC	4 cut(s)	741, 1122, 1251, 1515
Ecl136II	GAGCTC	3 cut(s)	129, 909, 1833
Eco130I	CCWWGG	2 cut(s)	251, 265
Eco24I	GRGCYC	3 cut(s)	131, 911, 1835
Eco31I	GGTCTC	1 cut(s)	1453
Eco47I	GGWCC	2 cut(s)	204, 229
Eco53kI	GAGCTC	3 cut(s)	129, 909, 1833
Eco57I	CTGAAG	3 cut(s)	129, 1652, 2018
Eco81I	CCTNAGG	1 cut(s)	1884
Eco88I	CYCGRG	1 cut(s)	2222
Eco91I	GGTNACC	1 cut(s)	457
EcoICRI	GAGCTC	3 cut(s)	129, 909, 1833
EcoO65I	GGTNACC	1 cut(s)	457
EcoRII	CCWGG	3 cut(s)	505, 1489, 1896
EcoT14I	CCWWGG	2 cut(s)	251, 265
EcoT22I	ATGCAT	2 cut(s)	343, 489
EcoT38I	GRGCYC	3 cut(s)	131, 911, 1835
ErhI	CCWWGG	2 cut(s)	251, 265
Esp3I	CGTCTC	1 cut(s)	1124
FalI	AAGNNNNNCTT	2 cut(s)	1512, 1544
FaqI	GGGAC	3 cut(s)	1568, 1720, 1914
FauI	CCCGC	2 cut(s)	461, 1545
FauNDI	CATATG	1 cut(s)	451
FbaI	TGATCA	1 cut(s)	493
Fnu4HI	GCNGC	8 cut(s)	57, 396, 466, 738, 1185, 1404, 1952, 2019
FokI	GGATG	4 cut(s)	533, 674, 1016, 1583
FriOI	GRGCYC	3 cut(s)	131, 911, 1835
Fsp4HI	GCNGC	8 cut(s)	57, 396, 466, 738, 1185, 1404, 1952, 2019
FspBI	CTAG	5 cut(s)	35, 977, 1311, 1722, 1752
FspI	TGCGCA	1 cut(s)	1155
GlaI	GCGC	3 cut(s)	418, 1155, 1629
GluI	GCNGC	8 cut(s)	57, 396, 466, 738, 1185, 1404, 1952, 2019
GsaI	CCCAGC	1 cut(s)	716
GsuI	CTGGAG	1 cut(s)	762
HaeII	RGCGCY	1 cut(s)	420
HaeIII	GGCC	1 cut(s)	360
HapII	CCGG	2 cut(s)	1159, 1968
HgaI	GACGC	1 cut(s)	1141
HhaI	GCGC	3 cut(s)	419, 1156, 1630
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	3 cut(s)	417, 1154, 1628
HinP1I	GCGC	3 cut(s)	417, 1154, 1628
HincII	GTYRAC	4 cut(s)	433, 999, 1431, 1757
HindII	GTYRAC	4 cut(s)	433, 999, 1431, 1757
HpaII	CCGG	2 cut(s)	1159, 1968
HphI	GGTGA	6 cut(s)	451, 503, 866, 1475, 2133, 2239
Hpy166II	GTNNAC	6 cut(s)	242, 433, 999, 1431, 1757, 1994
Hpy188I	TCNGA	6 cut(s)	904, 935, 1126, 1653, 2011, 2255
Hpy188III	TCNNGA	8 cut(s)	21, 51, 823, 1222, 1374, 1601, 1886, 1968
Hpy8I	GTNNAC	6 cut(s)	242, 433, 999, 1431, 1757, 1994
HpyCH4III	ACNGT	9 cut(s)	165, 223, 229, 437, 985, 1102, 1269, 1291, 1665
HpyF10VI	GCNNNNNNNGC	4 cut(s)	287, 316, 1160, 1403
HpyF3I	CTNAG	9 cut(s)	245, 399, 666, 785, 903, 1067, 1496, 1884, 2010
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	3 cut(s)	417, 1154, 1628
Kpn2I	TCCGGA	1 cut(s)	1967
KpnI	GGTACC	1 cut(s)	1883
Ksp22I	TGATCA	1 cut(s)	493
LguI	GCTCTTC	1 cut(s)	741
LmnI	GCTCC	2 cut(s)	795, 1525
Lsp1109I	GCAGC	7 cut(s)	43, 382, 477, 749, 1196, 1390, 1963
LweI	GCATC	9 cut(s)	146, 184, 523, 552, 652, 1297, 1615, 1849, 2046
MabI	ACCWGGT	1 cut(s)	1489
MaeI	CTAG	5 cut(s)	35, 977, 1311, 1722, 1752
MaeIII	GTNAC	7 cut(s)	217, 223, 457, 726, 1102, 1212, 1285
MfeI	CAATTG	3 cut(s)	875, 1932, 2198
MflI	RGATCY	2 cut(s)	597, 947
MhlI	GDGCHC	6 cut(s)	131, 674, 753, 911, 1835, 1996
MlyI	GAGTC	5 cut(s)	438, 469, 550, 973, 1642
MmeI	TCCRAC	1 cut(s)	742
Mph1103I	ATGCAT	2 cut(s)	343, 489
MroI	TCCGGA	1 cut(s)	1967
MroXI	GAANNNNTTC	2 cut(s)	1507, 2213
MseI	TTAA	9 cut(s)	615, 957, 1145, 1250, 1667, 1676, 1943, 2045, 2066
MslI	CAYNNNNRTG	5 cut(s)	384, 756, 1080, 1989, 2150
MspA1I	CMGCKG	2 cut(s)	468, 740
MspI	CCGG	2 cut(s)	1159, 1968
MspR9I	CCNGG	4 cut(s)	507, 1160, 1491, 1898
MunI	CAATTG	3 cut(s)	875, 1932, 2198
MvaI	CCWGG	3 cut(s)	507, 1491, 1898
MwoI	GCNNNNNNNGC	4 cut(s)	287, 316, 1160, 1403
NciI	CCSGG	1 cut(s)	1160
NdeI	CATATG	1 cut(s)	451
NheI	GCTAGC	1 cut(s)	1310
NlaIV	GGNNCC	4 cut(s)	40, 797, 949, 1881
NmuCI	GTSAC	5 cut(s)	217, 223, 457, 726, 1212
NsbI	TGCGCA	1 cut(s)	1155
NsiI	ATGCAT	2 cut(s)	343, 489
NspI	RCATGY	2 cut(s)	407, 761
NspV	TTCGAA	1 cut(s)	2217
PaeR7I	CTCGAG	1 cut(s)	2222
PciSI	GCTCTTC	1 cut(s)	741
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PdmI	GAANNNNTTC	2 cut(s)	1507, 2213
PfeI	GAWTC	6 cut(s)	628, 1034, 1240, 1419, 1799, 2126
PflFI	GACNNNGTC	1 cut(s)	1491
PkrI	GCNGC	8 cut(s)	58, 397, 467, 739, 1186, 1405, 1953, 2020
Ple19I	CGATCG	2 cut(s)	26, 349
PleI	GAGTC	5 cut(s)	437, 469, 550, 972, 1642
PpsI	GAGTC	5 cut(s)	437, 469, 550, 972, 1642
PshBI	ATTAAT	1 cut(s)	957
Psp124BI	GAGCTC	3 cut(s)	131, 911, 1835
Psp6I	CCWGG	3 cut(s)	505, 1489, 1896
PspEI	GGTNACC	1 cut(s)	457
PspFI	CCCAGC	1 cut(s)	712
PspGI	CCWGG	3 cut(s)	505, 1489, 1896
PspN4I	GGNNCC	4 cut(s)	40, 797, 949, 1881
PspPI	GGNCC	3 cut(s)	204, 229, 359
PspXI	VCTCGAGB	1 cut(s)	2222
PsuI	RGATCY	2 cut(s)	597, 947
PsyI	GACNNNGTC	1 cut(s)	1491
PvuI	CGATCG	2 cut(s)	26, 349
PvuII	CAGCTG	1 cut(s)	740
RsaI	GTAC	3 cut(s)	167, 439, 1881
RsaNI	GTAC	3 cut(s)	166, 438, 1880
RseI	CAYNNNNRTG	5 cut(s)	384, 756, 1080, 1989, 2150
Rsr2I	CGGWCCG	1 cut(s)	229
RsrII	CGGWCCG	1 cut(s)	229
SacI	GAGCTC	3 cut(s)	131, 911, 1835
SapI	GCTCTTC	1 cut(s)	741
SaqAI	TTAA	9 cut(s)	615, 957, 1145, 1250, 1667, 1676, 1943, 2045, 2066
SatI	GCNGC	8 cut(s)	57, 396, 466, 738, 1185, 1404, 1952, 2019
Sau96I	GGNCC	3 cut(s)	204, 229, 359
ScaI	AGTACT	1 cut(s)	167
SchI	GAGTC	5 cut(s)	438, 469, 550, 973, 1642
ScrFI	CCNGG	4 cut(s)	507, 1160, 1491, 1898
SduI	GDGCHC	6 cut(s)	131, 674, 753, 911, 1835, 1996
SexAI	ACCWGGT	1 cut(s)	1489
SfaNI	GCATC	9 cut(s)	146, 184, 523, 552, 652, 1297, 1615, 1849, 2046
SfcI	CTRYAG	2 cut(s)	1027, 1863
Sfr274I	CTCGAG	1 cut(s)	2222
SfuI	TTCGAA	1 cut(s)	2217
SinI	GGWCC	2 cut(s)	204, 229
SlaI	CTCGAG	1 cut(s)	2222
SmiMI	CAYNNNNRTG	5 cut(s)	384, 756, 1080, 1989, 2150
SmlI	CTYRAG	3 cut(s)	1601, 1770, 2222
SmoI	CTYRAG	3 cut(s)	1601, 1770, 2222
SpeI	ACTAGT	2 cut(s)	1721, 1751
SsiI	CCGC	7 cut(s)	197, 232, 310, 468, 1071, 1552, 2018
SspI	AATATT	1 cut(s)	101
SspMI	CTAG	5 cut(s)	35, 977, 1311, 1722, 1752
SstI	GAGCTC	3 cut(s)	131, 911, 1835
StyD4I	CCNGG	4 cut(s)	505, 1158, 1489, 1896
StyI	CCWWGG	2 cut(s)	251, 265
TaaI	ACNGT	9 cut(s)	165, 223, 229, 437, 985, 1102, 1269, 1291, 1665
TaqI	TCGA	9 cut(s)	26, 50, 77, 151, 822, 1802, 2163, 2217, 2223
TatI	WGTACW	1 cut(s)	165
TauI	GCSGC	1 cut(s)	2021
TfiI	GAWTC	6 cut(s)	628, 1034, 1240, 1419, 1799, 2126
Tru1I	TTAA	9 cut(s)	615, 957, 1145, 1250, 1667, 1676, 1943, 2045, 2066
Tru9I	TTAA	9 cut(s)	615, 957, 1145, 1250, 1667, 1676, 1943, 2045, 2066
TscAI	CASTG	6 cut(s)	228, 525, 819, 1105, 1741, 2001
TseFI	GTSAC	5 cut(s)	217, 223, 457, 726, 1212
TseI	GCWGC	7 cut(s)	56, 395, 465, 737, 1184, 1403, 1951
Tsp45I	GTSAC	5 cut(s)	217, 223, 457, 726, 1212
TspDTI	ATGAA	7 cut(s)	60, 1101, 1587, 1757, 1781, 2088, 2106
TspGWI	ACGGA	4 cut(s)	191, 1016, 1699, 2055
TspRI	CASTG	6 cut(s)	228, 525, 819, 1105, 1741, 2001
Tth111I	GACNNNGTC	1 cut(s)	1491
VneI	GTGCAC	1 cut(s)	1992
VpaK11BI	GGWCC	2 cut(s)	204, 229
VspI	ATTAAT	1 cut(s)	957
XapI	RAATTY	6 cut(s)	258, 643, 772, 1176, 1358, 1892
XceI	RCATGY	2 cut(s)	407, 761
XhoI	CTCGAG	1 cut(s)	2222
XmnI	GAANNNNTTC	2 cut(s)	1507, 2213
XspI	CTAG	5 cut(s)	35, 977, 1311, 1722, 1752
ZrmI	AGTACT	1 cut(s)	167
Zsp2I	ATGCAT	2 cut(s)	343, 489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.