Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002895.1

Orthogroup ID

OG0009882

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 4165

Gene Structure 4165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002895.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2805 bp

atggctagccggcaagcgacgaagctcagcaaatcggcgatggttttggcggccatgaacggcgcctccaaaacctcaacaagttccctctctcggtgtcgtgaaactgcggtggctgcctccaagttttccatgggcggctccgtggctcccttcaatgtcgtttgggatcgaaatcatgtcgtttcggccaagtatgtggcaaacactctcagtcggagctttcactcttcgggtcctcgtttcaactccgccggcagcgctgctcaggtcaccaccaaatgccctgcggtggctgcctccaagttttccatgggcggctccgtggctcccttcaatgtcgtttgggatcgaaatcatgtcgtttctgtggcaaacactctcagtcggagctttcactcttcgggtcctcgtttcaactccgccagcagcgctgctcaggctcagcagaatgagttcactgagatggcatgggagggcataattggggctgtggaagccgccagaaatagcaagcaacaagtggtggaatctgagcacttgatgaaagctatcttggagcagaaggatggtttggcgaggagaatcttcaccaaggctggtgtagacgacaccactgttctccaggccaccgatgacttcattgctcagcaacccaaggtgatgggtgcgaccagtggacctataataggcacgcatctcggcgctctgttggagaatgcccgaaggcagaagaaagaaatgaatgatgattttgtgtctgtggagcaccttgtgttggcgtttcagtccgacacacggtttggccagcaattgttcaaaaacctccagcttactgacaaggatttgaaggaggctgttaaacatgttcgtgggaatcagagagtcactgatcaaaatcctgaagggaaatatgaggctttgactaaatatgggaacgacttgactgagctcgccagtcgtggcaaacttgatccagttattggacgggatgatgaaatacgccgttgtatccaaatactgtccaggagaacaaaaaataatcccgttattattggagagcctggtgtcggaaaaactgcaatcgctgaaggattagcacaacggattgtgcgtggggatgttccggaacccctattgaacagaaagttgatttctttagatatgggttcattggtcgctggagccaagtttcgtggtgactttgaggaaagattgaaagctgtattgaaggaagttactgcttcaaatggacagatcatattattcattgatgagattcatactgttgtaggagcaggggctacaagtggtgcaatggatgctgggaacttgttgaaaccaatgcttgggcggggtgaactacggtgtataggagcaaccacgttgaatgagtacagaaaatacattgagaaggatcctgcactggagcgtaggtttcagcaggttttttgtggtcagccatctgtcgaagacacgatatccattcttcgtgggttgcgtgagcggtacgagctgcatcatggtgtgaaaatatcagatagtgcccttgtttctgcagcagttctttctgacagatacattacagaacgatttttgcctgacaaagccattgatcttgttgatgaagctgctgcaaagctgaaaatggagatcacatccaagccaactgagttagatgaggtagacagagctgtactgaagttggagatggagaagctatctttgcaaaatgacacagataaatcatcgaaagaaaggttaagcaagctggagagtgacctcgcattgctcaaacagaaacaaaaagaatttaatgaacagtgggatcttgagaaggctctcatgactcgaatacgatcaattaaagaagagattgatagagtaaaccaagagatggaagctgctgaacgtgcctatgacctaagtcgtgctgctgagctcaaatatggaactctaatgtccctgcaacgccagttagaagaggcggagaaaaacctttctgagtaccagaaatctggaaaatctttcctacgagaagaagtcaccgatcttgatattgctgagattgtaagcaaatggactggtatacccttgtcaaaccttcaacagtcggaaagagacaagctagtcatgctagaacaggtacttcataagagggtagtgggtcaagatatagccgtgaagtcggtagctgatgcaatcagacgttcaagggctggtctatcagacccaaaccgacctattgcaagtttcatgtttttgggacctactggtgtggggaaaacagagcttgcaaaggccttggccagctatctcttcaacacagaaaatgctctggttaggattgatatgagtgagtacatggaaaagcatgcagtttcacgtttggtgggtgctccgcctggttatgttggttatgaagaaggtggacaactaacagaagtggttcgtcgaagaccctattgtgtagtgctattcgatgaaatagagaaagcacatcaggacgtgttcaatattttgttacaattgctggatgatggaaggataactgactcacaaggaaggactgtaagcttcaccaattgtgttgtgataatgacctcaaatcttggttcccactatatacttgaaactcttcgtaatactcaagacagcaaggatgcagtatatgagttgatgaaaagacaagtggttgaattggcgagacagactttccgccctgagtttttgaatcgcgttgatgagtttatcgtgttccagcctttggactccaaagagatctgtaacattgttgagatacag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

935

Amino Acids

103.83

Weight (kDa)

6.98

Isoelectric Point (pI)

36.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25140
fragaria_vesca	FvH4_2g40970 FvH4_2g40970 FvH4_2g40970 FvH4_2g40970
malus_domestica	MD08G1058100.v1.1 MD15G1038200.v1.1
prunus_persica	Prupe.1G392200_v2.0.a1
pyrus_communis	pycom08g04820 pycom15g03540
rosa_chinensis	RchiOBHm_Chr6g0299601
rosa_laevigata	RLG00000011406
rosa_multiflora	Rmu_sc0002895.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168520
rosa_rugosa	Rorug06G0290800 Rorug06G0290900
rosa_samantha	Rh6AG401700 Rh6BG410100 Rh6CG415700 Rh6DG402900
rosa_wichuraiana	Rw6G035150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2129
Acc36I	ACCTGC	1 cut(s)	1435
AccB1I	GGYRCC	1 cut(s)	62
AccB7I	CCANNNNNTGG	4 cut(s)	983, 1349, 1897, 2767
AccBSI	CCGCTC	1 cut(s)	1507
AccI	GTMKAC	3 cut(s)	606, 1686, 2089
AccII	CGCG	1 cut(s)	2739
AccIII	TCCGGA	1 cut(s)	1126
AclWI	GGATC	6 cut(s)	177, 357, 968, 1412, 1425, 1836
AcoI	YGGCCR	4 cut(s)	51, 189, 805, 2307
AcsI	RAATTY	1 cut(s)	1811
AcuI	CTGAAG	3 cut(s)	924, 1110, 1721
AcyI	GRCGYC	1 cut(s)	63
AdeI	CACNNNGTG	1 cut(s)	775
AfaI	GTAC	6 cut(s)	1397, 1511, 1698, 2009, 2148, 2363
AfeI	AGCGCT	2 cut(s)	262, 433
AflIII	ACRYGT	2 cut(s)	865, 2508
AjiI	CACGTC	1 cut(s)	2509
AjnI	CCWGG	4 cut(s)	624, 1025, 1063, 2404
AjuI	GAANNNNNNNTTGG	4 cut(s)	539, 557, 571, 589
AloI	GAACNNNNNNTCC	2 cut(s)	50, 82
Alw21I	GWGCWC	5 cut(s)	540, 771, 954, 1944, 2401
Alw26I	GTCTC	2 cut(s)	2115, 2701
AlwI	GGATC	6 cut(s)	177, 357, 968, 1412, 1425, 1836
Aor13HI	TCCGGA	1 cut(s)	1126
Aor51HI	AGCGCT	2 cut(s)	262, 433
AoxI	GGCC	6 cut(s)	51, 189, 627, 805, 2301, 2307
ApoI	RAATTY	1 cut(s)	1811
ArsI	GACNNNNNNTTYG	2 cut(s)	785, 817
Asp700I	GAANNNNTTC	3 cut(s)	455, 2448, 2637
AspLEI	GCGC	4 cut(s)	65, 263, 434, 707
AspS9I	GGNCC	4 cut(s)	236, 407, 680, 2267
AsuHPI	GGTGA	7 cut(s)	265, 583, 673, 1211, 1370, 2038, 2572
AsuNHI	GCTAGC	1 cut(s)	5
AvaII	GGWCC	4 cut(s)	236, 407, 680, 2267
BaeGI	GKGCMC	1 cut(s)	1549
BalI	TGGCCA	2 cut(s)	807, 2309
BamHI	GGATCC	1 cut(s)	1417
BanI	GGYRCC	1 cut(s)	62
BanII	GRGCYC	2 cut(s)	954, 1944
BbsI	GAAGAC	2 cut(s)	1479, 2464
Bbv12I	GWGCWC	5 cut(s)	540, 771, 954, 1944, 2401
BccI	CCATC	8 cut(s)	34, 460, 563, 658, 1471, 1705, 1891, 2534
BceAI	ACGGC	3 cut(s)	76, 990, 2165
BcgI	CGANNNNNNTGC	2 cut(s)	682, 716
BciT130I	CCWGG	4 cut(s)	626, 1027, 1065, 2406
BciVI	GTATCC	1 cut(s)	1022
BclI	TGATCA	1 cut(s)	892
BcoDI	GTCTC	2 cut(s)	2115, 2701
BfaI	CTAG	3 cut(s)	6, 2129, 2138
BfmI	CTRYAG	1 cut(s)	1557
BfoI	RGCGCY	4 cut(s)	66, 264, 435, 708
BfuAI	ACCTGC	1 cut(s)	1435
BfuI	GTATCC	1 cut(s)	1022
BglII	AGATCT	1 cut(s)	2781
BlpI	GCTNAGC	4 cut(s)	26, 444, 648, 1938
Bme1390I	CCNGG	4 cut(s)	626, 1027, 1065, 2406
Bme18I	GGWCC	4 cut(s)	236, 407, 680, 2267
BmgBI	CACGTC	1 cut(s)	2509
BmgT120I	GGNCC	4 cut(s)	236, 407, 680, 2267
BmrFI	CCNGG	4 cut(s)	626, 1027, 1065, 2406
BmsI	GCATC	5 cut(s)	706, 1312, 1528, 2188, 2653
BmtI	GCTAGC	1 cut(s)	9
BoxI	GACNNNNGTC	1 cut(s)	1926
BpiI	GAAGAC	2 cut(s)	1479, 2464
BpmI	CTGGAG	5 cut(s)	608, 812, 1203, 1448, 1793
Bpu10I	CCTNAGC	2 cut(s)	267, 438
Bpu1102I	GCTNAGC	4 cut(s)	26, 444, 648, 1938
BpuEI	CTTGAG	2 cut(s)	1853, 2634
BsaBI	GATNNNNATC	3 cut(s)	174, 354, 897
BsaHI	GRCGYC	1 cut(s)	63
BsaJI	CCNNGG	7 cut(s)	132, 144, 312, 324, 594, 657, 2304
BsaWI	WCCGGW	1 cut(s)	1126
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 80, 1421, 1451
Bse118I	RCCGGY	2 cut(s)	9, 254
Bse1I	ACTGG	7 cut(s)	675, 957, 977, 1431, 1975, 2089, 2278
Bse3DI	GCAATG	3 cut(s)	642, 1323, 1787
Bse8I	GATNNNNATC	3 cut(s)	174, 354, 897
BseAI	TCCGGA	1 cut(s)	1126
BseBI	CCWGG	4 cut(s)	626, 1027, 1065, 2406
BseDI	CCNNGG	7 cut(s)	132, 144, 312, 324, 594, 657, 2304
BseGI	GGATG	7 cut(s)	574, 997, 1126, 1327, 1658, 2542, 2668
BseJI	GATNNNNATC	3 cut(s)	174, 354, 897
BseMI	GCAATG	3 cut(s)	642, 1323, 1787
BseNI	ACTGG	7 cut(s)	675, 957, 977, 1431, 1975, 2089, 2278
BseRI	GAGGAG	1 cut(s)	595
BseSI	GKGCMC	1 cut(s)	1549
BseYI	CCCAGC	1 cut(s)	1325
BsgI	GTGCAG	1 cut(s)	1407
Bsh1236I	CGCG	1 cut(s)	2739
BshFI	GGCC	6 cut(s)	53, 191, 629, 807, 2303, 2309
BshNI	GGYRCC	1 cut(s)	62
BsiHKAI	GWGCWC	5 cut(s)	540, 771, 954, 1944, 2401
BsiSI	CCGG	3 cut(s)	10, 255, 1127
BslFI	GGGAC	2 cut(s)	1948, 2280
BsmAI	GTCTC	2 cut(s)	2115, 2701
BsmFI	GGGAC	2 cut(s)	1948, 2280
BsmI	GAATGC	1 cut(s)	724
BsnI	GGCC	6 cut(s)	53, 191, 629, 807, 2303, 2309
Bsp1286I	GDGCHC	6 cut(s)	540, 771, 954, 1549, 1944, 2401
Bsp13I	TCCGGA	1 cut(s)	1126
Bsp1720I	GCTNAGC	4 cut(s)	26, 444, 648, 1938
Bsp19I	CCATGG	2 cut(s)	132, 312
BspANI	GGCC	6 cut(s)	53, 191, 629, 807, 2303, 2309
BspEI	TCCGGA	1 cut(s)	1126
BspFNI	CGCG	1 cut(s)	2739
BspHI	TCATGA	1 cut(s)	1845
BspMAI	CTGCAG	1 cut(s)	1561
BspMI	ACCTGC	1 cut(s)	1435
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	6 cut(s)	177, 357, 968, 1412, 1425, 1836
BspT107I	GGYRCC	1 cut(s)	62
BsrBI	CCGCTC	1 cut(s)	1507
BsrDI	GCAATG	3 cut(s)	642, 1323, 1787
BsrFI	RCCGGY	2 cut(s)	9, 254
BsrI	ACTGG	7 cut(s)	675, 957, 977, 1431, 1975, 2089, 2278
BssAI	RCCGGY	2 cut(s)	9, 254
BssECI	CCNNGG	7 cut(s)	132, 144, 312, 324, 594, 657, 2304
BssNAI	GTATAC	1 cut(s)	2090
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	5 cut(s)	132, 312, 594, 657, 2304
Bst1107I	GTATAC	1 cut(s)	2090
Bst2UI	CCWGG	4 cut(s)	626, 1027, 1065, 2406
Bst4CI	ACNGT	8 cut(s)	619, 801, 1023, 1288, 1368, 1824, 2112, 2572
Bst6I	CTCTTC	6 cut(s)	235, 406, 1866, 1977, 2324, 2643
BstACI	GRCGYC	1 cut(s)	63
BstAPI	GCANNNNNTGC	1 cut(s)	1322
BstDSI	CCRYGG	4 cut(s)	132, 144, 312, 324
BstEII	GGTNACC	1 cut(s)	271
BstENI	CCTNNNNNAGG	1 cut(s)	687
BstF5I	GGATG	7 cut(s)	574, 997, 1126, 1327, 1658, 2542, 2668
BstFNI	CGCG	1 cut(s)	2739
BstH2I	RGCGCY	4 cut(s)	66, 264, 435, 708
BstHHI	GCGC	4 cut(s)	65, 263, 434, 707
BstMAI	GTCTC	2 cut(s)	2115, 2701
BstNI	CCWGG	4 cut(s)	626, 1027, 1065, 2406
BstNSI	RCATGY	2 cut(s)	869, 2378
BstPAI	GACNNNNGTC	1 cut(s)	1926
BstPI	GGTNACC	1 cut(s)	271
BstSCI	CCNGG	4 cut(s)	624, 1025, 1063, 2404
BstSFI	CTRYAG	1 cut(s)	1557
BstSLI	GKGCMC	1 cut(s)	1549
BstUI	CGCG	1 cut(s)	2739
BstV2I	GAAGAC	2 cut(s)	1479, 2464
BstX2I	RGATCY	3 cut(s)	1417, 1828, 2781
BstXI	CCANNNNNNTGG	3 cut(s)	199, 664, 2018
BstYI	RGATCY	3 cut(s)	1417, 1828, 2781
BstZ17I	GTATAC	1 cut(s)	2090
BsuI	GTATCC	1 cut(s)	1022
BsuRI	GGCC	6 cut(s)	53, 191, 629, 807, 2303, 2309
BtgI	CCRYGG	4 cut(s)	132, 144, 312, 324
BtgZI	GCGATG	1 cut(s)	53
BtrI	CACGTC	1 cut(s)	2509
BtsCI	GGATG	7 cut(s)	574, 997, 1126, 1327, 1658, 2542, 2668
BtsIMutI	CAGTG	6 cut(s)	459, 615, 682, 888, 1424, 1829
BveI	ACCTGC	1 cut(s)	1435
CciI	TCATGA	1 cut(s)	1845
CfoI	GCGC	4 cut(s)	65, 263, 434, 707
Cfr10I	RCCGGY	2 cut(s)	9, 254
Cfr13I	GGNCC	4 cut(s)	236, 407, 680, 2267
Csp6I	GTAC	6 cut(s)	1396, 1510, 1697, 2008, 2147, 2362
CspCI	CAANNNNNGTGG	2 cut(s)	1177, 1212
CviQI	GTAC	6 cut(s)	1396, 1510, 1697, 2008, 2147, 2362
DinI	GGCGCC	1 cut(s)	64
DraIII	CACNNNGTG	1 cut(s)	775
DrdI	GACNNNNNNGTC	1 cut(s)	2129
DseDI	GACNNNNNNGTC	1 cut(s)	2129
EaeI	YGGCCR	4 cut(s)	51, 189, 805, 2307
Eam1104I	CTCTTC	6 cut(s)	235, 406, 1866, 1977, 2324, 2643
EarI	CTCTTC	6 cut(s)	235, 406, 1866, 1977, 2324, 2643
EciI	GGCGGA	5 cut(s)	241, 412, 2003, 2391, 2708
Ecl136II	GAGCTC	2 cut(s)	952, 1942
Eco130I	CCWWGG	5 cut(s)	132, 312, 594, 657, 2304
Eco147I	AGGCCT	1 cut(s)	2303
Eco24I	GRGCYC	2 cut(s)	954, 1944
Eco32I	GATATC	1 cut(s)	1482
Eco47I	GGWCC	4 cut(s)	236, 407, 680, 2267
Eco47III	AGCGCT	2 cut(s)	262, 433
Eco53kI	GAGCTC	2 cut(s)	952, 1942
Eco57I	CTGAAG	3 cut(s)	924, 1110, 1721
Eco91I	GGTNACC	1 cut(s)	271
EcoICRI	GAGCTC	2 cut(s)	952, 1942
EcoNI	CCTNNNNNAGG	1 cut(s)	687
EcoO109I	RGGNCCY	3 cut(s)	236, 407, 2267
EcoO65I	GGTNACC	1 cut(s)	271
EcoRII	CCWGG	4 cut(s)	624, 1025, 1063, 2404
EcoRV	GATATC	1 cut(s)	1482
EcoT14I	CCWWGG	5 cut(s)	132, 312, 594, 657, 2304
EcoT38I	GRGCYC	2 cut(s)	954, 1944
EgeI	GGCGCC	1 cut(s)	64
EheI	GGCGCC	1 cut(s)	64
ErhI	CCWWGG	5 cut(s)	132, 312, 594, 657, 2304
FaqI	GGGAC	2 cut(s)	1948, 2280
FauI	CCCGC	1 cut(s)	1347
FbaI	TGATCA	1 cut(s)	892
FblI	GTMKAC	3 cut(s)	606, 1686, 2089
FokI	GGATG	7 cut(s)	581, 1004, 1133, 1334, 1645, 2549, 2675
FriOI	GRGCYC	2 cut(s)	954, 1944
FspBI	CTAG	3 cut(s)	6, 2129, 2138
GlaI	GCGC	4 cut(s)	64, 262, 433, 706
GsaI	CCCAGC	1 cut(s)	1329
GsuI	CTGGAG	5 cut(s)	608, 812, 1203, 1448, 1793
HaeII	RGCGCY	4 cut(s)	66, 264, 435, 708
HaeIII	GGCC	6 cut(s)	53, 191, 629, 807, 2303, 2309
HapII	CCGG	3 cut(s)	10, 255, 1127
HhaI	GCGC	4 cut(s)	65, 263, 434, 707
Hin1I	GRCGYC	1 cut(s)	63
Hin6I	GCGC	4 cut(s)	63, 261, 432, 705
HinP1I	GCGC	4 cut(s)	63, 261, 432, 705
HindIII	AAGCTT	1 cut(s)	2575
HinfI	GANTC	9 cut(s)	530, 585, 877, 885, 1279, 1849, 2555, 2734, 2771
HpaII	CCGG	3 cut(s)	10, 255, 1127
HphI	GGTGA	7 cut(s)	265, 583, 673, 1211, 1370, 2038, 2572
Hpy166II	GTNNAC	8 cut(s)	459, 607, 680, 1361, 1687, 1888, 2090, 2432
Hpy8I	GTNNAC	8 cut(s)	459, 607, 680, 1361, 1687, 1888, 2090, 2432
Hpy99I	CGWCG	2 cut(s)	22, 2457
HpyCH4III	ACNGT	8 cut(s)	619, 801, 1023, 1288, 1368, 1824, 2112, 2572
HpyCH4IV	ACGT	5 cut(s)	1385, 1912, 2209, 2386, 2508
HpySE526I	ACGT	5 cut(s)	1385, 1912, 2209, 2386, 2508
Hsp92I	GRCGYC	1 cut(s)	63
HspAI	GCGC	4 cut(s)	63, 261, 432, 705
KasI	GGCGCC	1 cut(s)	62
Kpn2I	TCCGGA	1 cut(s)	1126
KroI	GCCGGC	2 cut(s)	9, 254
KroNI	GCCGGC	2 cut(s)	11, 256
Ksp22I	TGATCA	1 cut(s)	892
LweI	GCATC	5 cut(s)	706, 1312, 1528, 2188, 2653
MaeI	CTAG	3 cut(s)	6, 2129, 2138
MaeII	ACGT	5 cut(s)	1385, 1912, 2209, 2386, 2508
MaeIII	GTNAC	8 cut(s)	271, 886, 1199, 1237, 1778, 2044, 2523, 2786
MbiI	CCGCTC	1 cut(s)	1507
MfeI	CAATTG	3 cut(s)	812, 2528, 2584
MflI	RGATCY	3 cut(s)	1417, 1828, 2781
MhlI	GDGCHC	6 cut(s)	540, 771, 954, 1549, 1944, 2401
MlsI	TGGCCA	2 cut(s)	807, 2309
MluCI	AATT	7 cut(s)	483, 812, 1811, 1863, 2528, 2584, 2699
MluNI	TGGCCA	2 cut(s)	807, 2309
Mly113I	GGCGCC	1 cut(s)	63
MlyI	GAGTC	4 cut(s)	894, 1843, 2549, 2765
MmeI	TCCRAC	7 cut(s)	197, 368, 693, 816, 1051, 1686, 2094
Mox20I	TGGCCA	2 cut(s)	807, 2309
MroI	TCCGGA	1 cut(s)	1126
MroNI	GCCGGC	2 cut(s)	9, 254
MroXI	GAANNNNTTC	3 cut(s)	455, 2448, 2637
MscI	TGGCCA	2 cut(s)	807, 2309
MseI	TTAA	4 cut(s)	861, 1763, 1815, 1866
MslI	CAYNNNNRTG	3 cut(s)	464, 870, 1524
Msp20I	TGGCCA	2 cut(s)	807, 2309
MspI	CCGG	3 cut(s)	10, 255, 1127
MspR9I	CCNGG	4 cut(s)	626, 1027, 1065, 2406
MunI	CAATTG	3 cut(s)	812, 2528, 2584
Mva1269I	GAATGC	1 cut(s)	724
MvaI	CCWGG	4 cut(s)	626, 1027, 1065, 2406
MvnI	CGCG	1 cut(s)	2739
NaeI	GCCGGC	2 cut(s)	11, 256
NarI	GGCGCC	1 cut(s)	63
NcoI	CCATGG	2 cut(s)	132, 312
NgoMIV	GCCGGC	2 cut(s)	9, 254
NheI	GCTAGC	1 cut(s)	5
NmeAIII	GCCGAG	1 cut(s)	681
NmuCI	GTSAC	5 cut(s)	271, 886, 1199, 1778, 2044
NspI	RCATGY	2 cut(s)	869, 2378
PaeI	GCATGC	1 cut(s)	2378
PagI	TCATGA	1 cut(s)	1845
PceI	AGGCCT	1 cut(s)	2303
PciI	ACATGT	1 cut(s)	865
PcsI	WCGNNNNNNNCGW	2 cut(s)	1111, 1498
PctI	GAATGC	1 cut(s)	724
PdiI	GCCGGC	2 cut(s)	11, 256
PdmI	GAANNNNTTC	3 cut(s)	455, 2448, 2637
PfeI	GAWTC	5 cut(s)	530, 585, 877, 1279, 2734
PflMI	CCANNNNNTGG	4 cut(s)	983, 1349, 1897, 2767
PfoI	TCCNGGA	1 cut(s)	1025
PleI	GAGTC	4 cut(s)	893, 1843, 2549, 2765
PluTI	GGCGCC	1 cut(s)	66
PpsI	GAGTC	4 cut(s)	893, 1843, 2549, 2765
PpuMI	RGGWCCY	3 cut(s)	236, 407, 2267
PscI	ACATGT	1 cut(s)	865
PshAI	GACNNNNGTC	1 cut(s)	1926
Psp124BI	GAGCTC	2 cut(s)	954, 1944
Psp5II	RGGWCCY	3 cut(s)	236, 407, 2267
Psp6I	CCWGG	4 cut(s)	624, 1025, 1063, 2404
PspEI	GGTNACC	1 cut(s)	271
PspFI	CCCAGC	1 cut(s)	1325
PspGI	CCWGG	4 cut(s)	624, 1025, 1063, 2404
PspPI	GGNCC	4 cut(s)	236, 407, 680, 2267
PspPPI	RGGWCCY	3 cut(s)	236, 407, 2267
PstI	CTGCAG	1 cut(s)	1561
PsuI	RGATCY	3 cut(s)	1417, 1828, 2781
RsaI	GTAC	6 cut(s)	1397, 1511, 1698, 2009, 2148, 2363
RsaNI	GTAC	6 cut(s)	1396, 1510, 1697, 2008, 2147, 2362
RseI	CAYNNNNRTG	3 cut(s)	464, 870, 1524
SacI	GAGCTC	2 cut(s)	954, 1944
SaqAI	TTAA	4 cut(s)	861, 1763, 1815, 1866
Sau96I	GGNCC	4 cut(s)	236, 407, 680, 2267
SchI	GAGTC	4 cut(s)	894, 1843, 2549, 2765
ScrFI	CCNGG	4 cut(s)	626, 1027, 1065, 2406
SduI	GDGCHC	6 cut(s)	540, 771, 954, 1549, 1944, 2401
SfaNI	GCATC	5 cut(s)	706, 1312, 1528, 2188, 2653
SfcI	CTRYAG	1 cut(s)	1557
SfoI	GGCGCC	1 cut(s)	64
SinI	GGWCC	4 cut(s)	236, 407, 680, 2267
SmiMI	CAYNNNNRTG	3 cut(s)	464, 870, 1524
SmlI	CTYRAG	2 cut(s)	1832, 2649
SmoI	CTYRAG	2 cut(s)	1832, 2649
SphI	GCATGC	1 cut(s)	2378
Sse9I	AATT	7 cut(s)	483, 812, 1811, 1863, 2528, 2584, 2699
SseBI	AGGCCT	1 cut(s)	2303
SspDI	GGCGCC	1 cut(s)	62
SspI	AATATT	1 cut(s)	2518
SspMI	CTAG	3 cut(s)	6, 2129, 2138
SstI	GAGCTC	2 cut(s)	954, 1944
StuI	AGGCCT	1 cut(s)	2303
StyD4I	CCNGG	4 cut(s)	624, 1025, 1063, 2404
StyI	CCWWGG	5 cut(s)	132, 312, 594, 657, 2304
TaaI	ACNGT	8 cut(s)	619, 801, 1023, 1288, 1368, 1824, 2112, 2572
TaiI	ACGT	5 cut(s)	1388, 1915, 2212, 2389, 2511
TaqI	TCGA	7 cut(s)	172, 352, 1470, 1751, 1852, 2455, 2481
TasI	AATT	7 cut(s)	483, 812, 1811, 1863, 2528, 2584, 2699
TatI	WGTACW	3 cut(s)	1395, 1696, 2361
TauI	GCSGC	4 cut(s)	53, 141, 321, 503
TfiI	GAWTC	5 cut(s)	530, 585, 877, 1279, 2734
Tru1I	TTAA	4 cut(s)	861, 1763, 1815, 1866
Tru9I	TTAA	4 cut(s)	861, 1763, 1815, 1866
TscAI	CASTG	6 cut(s)	466, 622, 682, 895, 1431, 1829
TseFI	GTSAC	5 cut(s)	271, 886, 1199, 1778, 2044
Tsp45I	GTSAC	5 cut(s)	271, 886, 1199, 1778, 2044
TspGWI	ACGGA	3 cut(s)	133, 313, 1120
TspRI	CASTG	6 cut(s)	466, 622, 682, 895, 1431, 1829
Van91I	CCANNNNNTGG	4 cut(s)	983, 1349, 1897, 2767
VpaK11BI	GGWCC	4 cut(s)	236, 407, 680, 2267
XagI	CCTNNNNNAGG	1 cut(s)	687
XapI	RAATTY	1 cut(s)	1811
XceI	RCATGY	2 cut(s)	869, 2378
XcmI	CCANNNNNNNNNTGG	2 cut(s)	130, 310
XmiI	GTMKAC	3 cut(s)	606, 1686, 2089
XmnI	GAANNNNTTC	3 cut(s)	455, 2448, 2637
XspI	CTAG	3 cut(s)	6, 2129, 2138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.