PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02730 AT5G16400 |
| fragaria_vesca | FvH4_6g00380 FvH4_6g00380 |
| malus_domestica | MD04G1246200.v1.1 MD12G1263900.v1.1 |
| prunus_persica | Prupe.6G362500_v2.0.a1 Prupe.6G362500_v2.0.a1 |
| pyrus_communis | pycom12g23990 pycom15g06310 |
| rosa_chinensis | RchiOBHm_Chr3g0447721 |
| rosa_laevigata | RLG00000025978 |
| rosa_multiflora | Rmu_sc0003550.1_g000001 Rmu_ssc0000391.1_g000003 Rmu_ssc0000391.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00425920 |
| rosa_rugosa | Rorug02G0604800 Rorug02G0604900 Rorug02G0605000 |
| rosa_samantha | Rh3AG004600 Rh3BG004100 Rh3BG004300 Rh3CG004100 Rh3CG004600 Rh3DG004500 |
| rosa_wichuraiana | Rw3G000340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 197 |
| AciI | CCGC | 1 cut(s) | 140 |
| AcuI | CTGAAG | 1 cut(s) | 75 |
| AgsI | TTSAA | 3 cut(s) | 16, 70, 208 |
| AluBI | AGCT | 2 cut(s) | 62, 163 |
| AluI | AGCT | 2 cut(s) | 62, 163 |
| AspS9I | GGNCC | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 2 cut(s) | 289, 307 |
| AsuII | TTCGAA | 2 cut(s) | 127, 403 |
| AvaII | GGWCC | 1 cut(s) | 49 |
| BanI | GGYRCC | 1 cut(s) | 197 |
| BccI | CCATC | 1 cut(s) | 151 |
| BfaI | CTAG | 1 cut(s) | 257 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| Bme18I | GGWCC | 1 cut(s) | 49 |
| BmgT120I | GGNCC | 1 cut(s) | 49 |
| BmiI | GGNNCC | 4 cut(s) | 50, 51, 199, 216 |
| Bpu14I | TTCGAA | 2 cut(s) | 127, 403 |
| BsaJI | CCNNGG | 1 cut(s) | 326 |
| BseDI | CCNNGG | 1 cut(s) | 326 |
| BseGI | GGATG | 1 cut(s) | 25 |
| BseMII | CTCAG | 3 cut(s) | 100, 155, 176 |
| BshNI | GGYRCC | 1 cut(s) | 197 |
| BslFI | GGGAC | 1 cut(s) | 62 |
| BsmFI | GGGAC | 1 cut(s) | 62 |
| Bsp119I | TTCGAA | 2 cut(s) | 127, 403 |
| BspACI | CCGC | 1 cut(s) | 140 |
| BspCNI | CTCAG | 3 cut(s) | 99, 156, 177 |
| BspHI | TCATGA | 1 cut(s) | 7 |
| BspLI | GGNNCC | 4 cut(s) | 50, 51, 199, 216 |
| BspT104I | TTCGAA | 2 cut(s) | 127, 403 |
| BspT107I | GGYRCC | 1 cut(s) | 197 |
| BssECI | CCNNGG | 1 cut(s) | 326 |
| BssT1I | CCWWGG | 1 cut(s) | 326 |
| Bst4CI | ACNGT | 3 cut(s) | 202, 295, 386 |
| BstBI | TTCGAA | 2 cut(s) | 127, 403 |
| BstDEI | CTNAG | 3 cut(s) | 86, 164, 185 |
| BstF5I | GGATG | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 160 |
| BtsCI | GGATG | 1 cut(s) | 25 |
| CciI | TCATGA | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 1 cut(s) | 49 |
| CviAII | CATG | 3 cut(s) | 8, 211, 229 |
| CviJI | RGCY | 6 cut(s) | 5, 62, 83, 143, 163, 182 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 62, 83, 143, 163, 182 |
| DdeI | CTNAG | 3 cut(s) | 86, 164, 185 |
| Eco130I | CCWWGG | 1 cut(s) | 326 |
| Eco47I | GGWCC | 1 cut(s) | 49 |
| Eco57I | CTGAAG | 1 cut(s) | 75 |
| EcoO109I | RGGNCCY | 1 cut(s) | 49 |
| EcoT14I | CCWWGG | 1 cut(s) | 326 |
| ErhI | CCWWGG | 1 cut(s) | 326 |
| FaeI | CATG | 3 cut(s) | 11, 214, 232 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 319, 351 |
| FaqI | GGGAC | 1 cut(s) | 62 |
| FatI | CATG | 3 cut(s) | 7, 210, 228 |
| FauNDI | CATATG | 1 cut(s) | 363 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| FokI | GGATG | 1 cut(s) | 32 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| FspBI | CTAG | 1 cut(s) | 257 |
| GluI | GCNGC | 1 cut(s) | 141 |
| Hin1II | CATG | 3 cut(s) | 11, 214, 232 |
| HinfI | GANTC | 2 cut(s) | 332, 358 |
| HphI | GGTGA | 2 cut(s) | 289, 307 |
| Hpy188I | TCNGA | 4 cut(s) | 42, 89, 99, 186 |
| Hpy188III | TCNNGA | 2 cut(s) | 8, 311 |
| HpyAV | CCTTC | 2 cut(s) | 10, 50 |
| HpyCH4III | ACNGT | 3 cut(s) | 202, 295, 386 |
| HpyCH4V | TGCA | 3 cut(s) | 154, 236, 419 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 160 |
| HpyF3I | CTNAG | 3 cut(s) | 86, 164, 185 |
| Hsp92II | CATG | 3 cut(s) | 11, 214, 232 |
| KflI | GGGWCCC | 1 cut(s) | 49 |
| LmnI | GCTCC | 3 cut(s) | 59, 160, 398 |
| LpnPI | CCDG | 3 cut(s) | 66, 324, 403 |
| MaeI | CTAG | 1 cut(s) | 257 |
| MboII | GAAGA | 2 cut(s) | 116, 274 |
| MluCI | AATT | 2 cut(s) | 11, 398 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 4 cut(s) | 18, 95, 267, 318 |
| MslI | CAYNNNNRTG | 2 cut(s) | 111, 113 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 160 |
| NdeI | CATATG | 1 cut(s) | 363 |
| NlaIII | CATG | 3 cut(s) | 11, 214, 232 |
| NlaIV | GGNNCC | 4 cut(s) | 50, 51, 199, 216 |
| NspV | TTCGAA | 2 cut(s) | 127, 403 |
| PagI | TCATGA | 1 cut(s) | 7 |
| PfeI | GAWTC | 2 cut(s) | 332, 358 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| PpuMI | RGGWCCY | 1 cut(s) | 49 |
| Psp5II | RGGWCCY | 1 cut(s) | 49 |
| PspN4I | GGNNCC | 4 cut(s) | 50, 51, 199, 216 |
| PspPI | GGNCC | 1 cut(s) | 49 |
| PspPPI | RGGWCCY | 1 cut(s) | 49 |
| RseI | CAYNNNNRTG | 2 cut(s) | 111, 113 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau96I | GGNCC | 1 cut(s) | 49 |
| SetI | ASST | 3 cut(s) | 64, 165, 412 |
| SfuI | TTCGAA | 2 cut(s) | 127, 403 |
| SinI | GGWCC | 1 cut(s) | 49 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 111, 113 |
| Sse9I | AATT | 2 cut(s) | 11, 398 |
| SsiI | CCGC | 1 cut(s) | 140 |
| SspMI | CTAG | 1 cut(s) | 257 |
| StyI | CCWWGG | 1 cut(s) | 326 |
| TaaI | ACNGT | 3 cut(s) | 202, 295, 386 |
| TaqI | TCGA | 2 cut(s) | 127, 403 |
| TasI | AATT | 2 cut(s) | 11, 398 |
| TauI | GCSGC | 1 cut(s) | 143 |
| TfiI | GAWTC | 2 cut(s) | 332, 358 |
| TspDTI | ATGAA | 2 cut(s) | 24, 350 |
| VpaK11BI | GGWCC | 1 cut(s) | 49 |
| XspI | CTAG | 1 cut(s) | 257 |