Rmu_sc0003602.1_g000009

Belongs to the peptidase C2 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003602.1
OG0007783
Physical Location & Seq
Reverse (-)
41966 .. 47979
6014 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003602.1_g000009.1.cds

Sequence Viewer

Length: 3153 bp
atgatggaagatgcggtacactttcttagtaaagaaaccgttgttcaagctattgctagatctgccaccaagaccagaaatgctttatctggaacttattcggctccacaaaggtctgccagttcagctgctcttttggttggagatcccacgattatgcgtgatagggcaggaaattttgtgcttcccagagcagatgtcatgaaattgagagatcgcttaagaaatgaggagttagttgcaggatcattcttcggaagaatgagatatggaaggactttccgccatgagccaacaagtagtattgatcaccgaagagagatgtgtgctcatgcacgaatattggctttggaagaggcgattgatacagaatgggtatatatgtgggataaatttggtggttatctgcttcttttgcttggtttgactgctaaggcagagcgggtacaggatgaggtacgcttgagactctttcttgatagcataggatttgcagacttaagtgccaagaaaataaaaaaatggatgccagaggatcgtaggcagtttgagattattcaggagagttacataagagaaaaggagatggaagaggaactcttaatgcaaagacgtgaagaggaggggaaaggcaaagagagaagaaaggctctcttggagaaggaagaacgcaaatggaaggagatagaagcgtctttaatttcctccattcctaatgctggcagcagggaagctgcagctgtggcagctgcagtgcgtgcagtagggggtgattctgttcttgatgattcttttgctcgagagagagtctcaagcattgcgcgtcgcatacgcacagctcagttaactcggcgagcactgcagacaggaatttccggagctgtatgcgttctagatgatgaaccgacaacaagtggcaggcactgtggccagattgattctagcatctgtcaaagtcagaagatcagcttttccattgcagtgatgatccaacctgtgtctgggcctgtttgcctattaggcactgagtttcaaaagaaagtttgttgggaaatattggtcgcaggttctgagcaaggaattgaagctggacaagttgggcttagattgatcactaaaggcgacagacaaactactgttgcaaaggagtggagtattagtgcaactagtattgcagatggaaggtggcatttggtaacaatgacaattgatgctgatttaggtgaggcaacttgctatctcgatggtggttttgatggctaccagactggtttaccattgcatgtgggtaatactatttgggagcaaggaacagaagtttgggtaggtgttagaccgcctacagatatggatgcatttgggaggtcagacagtgaaggggctgagtccaagatgcatattatggatgtgtttctatggggaaggtgcttaactgaggatgatattgctgctctccatacagctgttgggtcagctgatactagtatgatagattttcctgaagatgcttggcagtgggcagattcaccttctagacttgatgaatgggatagtgatcctgccgatgtagatctatatgatagggatgaagttgattgggatgggcaatattctagtggaaggaaaagaagatcagagcgtgatggagttctggttgatttggattcctttgccaggaggtttaggaaacctaggatggaaacgcaagaagaaattaatcaacgaatgctttctgttgaattggccgtcaaagaagctctctgtgcaagaggagaaacaaattttactgatcaggagtttcctccaaatgatcaatcactatttgtagattcggaaaatcccccttcaaagttgcaggtcgtttcagaatggatgaggcctgctgatattgtaaaagagagcaggcttgctactcggccgtgcttattttctggcactgtgaatccttctgatgtttgtcagggtcggctgggtgattgttggtttttgagtgctgttgctgttctgacggaagtttctcgaatatcagaagttattattactccagagtataatgaggaaggaatctacactgtccgcttctgtattcagggtgagtgggttcctgttgttgttgatgattggattccgtgtgaatcaccgggtaaaccagcatttgctactagtagaaaaggtaacgagttgtgggtctctttactggagaaggcatatgccaaattgcatggctcctatgaagcattagaaggtggacttgtccaagatgctcttgtagacctcactggaggtgcaggtgaagaaattgatatgaggagtgctcaggcccaaattgatcttgcgagtggtcgattatggtctcaattgttgcgcttcaaacaagagggatttcttctgggtgctggaagtccatctggttcagatgtacatatttcctccagtggcattgtgcaaggtcatgcttactcgttattgcaggtgagagaggtggatggtcacaagcttattcagattcgcaatccatgggccaatgaagttgagtggaatggcccctggtctgactcatcgcctgaatggactgataggatgaagcataagctgaagcatattccacagtcaaaagatggcatattctggatgtcctggcaagacttccaaattcattttcgatcaatatatgtttgccgtatctatccccctgagatgcgctactctgttcatggccaatggcgaagttatagtgctggtgggtgccaagactatgagacatggcatcaaaatccacaattccgattgagggccacagggccagatgcctcatttccaattcatgtattcattacgttgacacagggtgtgagcttctcaagaacagttgctggtttcagaaactatcaatccagtcatgattcaatgatgttctatattgggatgaggatactcaaaactcgaggtcgccgagctgcttacaatatatacctacatgaatccgtcggtgggacagattatgttaattcacgagaaatatcttgtgaaatggttttggatccagatccaaaaggttacacaatagtgccgacaactatacaccctggcgaagaagctccatttgttctttctgttttcacaaaagcatcaataaccttggaagccttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001558 GO:0001708 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004198 GO:0005198 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0005829 GO:0005886 GO:0005887 GO:0006275 GO:0006355 GO:0006508 GO:0006807 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007204 GO:0007275 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008307 GO:0009628 GO:0009651 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009966 GO:0009987 GO:0010008 GO:0010035 GO:0010038 GO:0010154 GO:0010468 GO:0010522 GO:0010524 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010927 GO:0010941 GO:0010959 GO:0012505 GO:0014717 GO:0014718 GO:0014823 GO:0014850 GO:0016020 GO:0016021 GO:0016043 GO:0016787 GO:0019219 GO:0019222 GO:0019538 GO:0019725 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030036 GO:0030154 GO:0030162 GO:0030234 GO:0030239 GO:0030315 GO:0031032 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031402 GO:0031410 GO:0031420 GO:0031432 GO:0031674 GO:0031982 GO:0031984 GO:0032101 GO:0032268 GO:0032269 GO:0032270 GO:0032501 GO:0032502 GO:0032875 GO:0032877 GO:0032879 GO:0032947 GO:0032989 GO:0032991 GO:0033036 GO:0033233 GO:0033234 GO:0033554 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0040008 GO:0042127 GO:0042175 GO:0042221 GO:0042383 GO:0042592 GO:0042692 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043122 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043269 GO:0043270 GO:0043292 GO:0043415 GO:0043416 GO:0043933 GO:0044085 GO:0044093 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044449 GO:0044459 GO:0044464 GO:0045165 GO:0045214 GO:0045740 GO:0045787 GO:0045862 GO:0045892 GO:0045893 GO:0045927 GO:0045934 GO:0045935 GO:0046872 GO:0048316 GO:0048468 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048638 GO:0048639 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050801 GO:0050865 GO:0050867 GO:0050896 GO:0051049 GO:0051050 GO:0051052 GO:0051054 GO:0051090 GO:0051091 GO:0051092 GO:0051094 GO:0051128 GO:0051146 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051239 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051279 GO:0051281 GO:0051282 GO:0051480 GO:0051592 GO:0051641 GO:0051716 GO:0051726 GO:0051924 GO:0051928 GO:0055001 GO:0055002 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055103 GO:0060255 GO:0060341 GO:0060548 GO:0061041 GO:0061061 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0065009 GO:0070011 GO:0070727 GO:0070887 GO:0070925 GO:0071214 GO:0071241 GO:0071248 GO:0071277 GO:0071470 GO:0071472 GO:0071704 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072657 GO:0080050 GO:0080090 GO:0080134 GO:0090068 GO:0090303 GO:0090329 GO:0090392 GO:0090627 GO:0090628 GO:0097264 GO:0097435 GO:0097708 GO:0098588 GO:0098771 GO:0098772 GO:0098805 GO:0098827 GO:0099080 GO:0099081 GO:0099512 GO:0104004 GO:0140096 GO:1901564 GO:1902531 GO:1902679 GO:1902680 GO:1903034 GO:1903036 GO:1903169 GO:1903320 GO:1903321 GO:1903506 GO:1903507 GO:1903508 GO:1904062 GO:1904064 GO:1904427 GO:2000011 GO:2000014 GO:2000024 GO:2000026 GO:2000105 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Calpain_III Peptidase_C2

Protein Analysis

1050

Amino Acids

117.99

Weight (kDa)

5.33

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2279, 2461
Acc36I ACCTGC 4 cut(s) 1055, 1846, 2279, 2461
AccB1I GGYRCC 1 cut(s) 2745
AccBSI CCGCTC 1 cut(s) 442
AccI GTMKAC 1 cut(s) 2271
AccII CGCG 1 cut(s) 823
AccIII TCCGGA 1 cut(s) 875
AciI CCGC 5 cut(s) 14, 283, 442, 1337, 2077
AclWI GGATC 8 cut(s) 140, 253, 543, 982, 1550, 3035, 3041, 3048
AcoI YGGCCR 4 cut(s) 928, 1743, 1916, 2716
AcsI RAATTY 5 cut(s) 175, 392, 870, 1780, 2652
AcuI CTGAAG 2 cut(s) 1521, 2615
AdeI CACNNNGTG 1 cut(s) 2849
AfaI GTAC 4 cut(s) 18, 447, 459, 2421
AfiI CCNNNNNNNGG 5 cut(s) 719, 1001, 1674, 2791, 2991
AflII CTTAAG 2 cut(s) 220, 499
AgsI TTSAA 7 cut(s) 47, 1034, 1085, 1739, 1848, 2371, 2907
AhlI ACTAGT 3 cut(s) 1166, 1481, 2162
AjiI CACGTC 1 cut(s) 614
AjnI CCWGG 4 cut(s) 1673, 2546, 2636, 3085
AjuI GAANNNNNNNTTGG 4 cut(s) 1303, 1335, 2643, 2675
AleI CACNNNNGTG 1 cut(s) 3065
Alw21I GWGCWC 3 cut(s) 331, 859, 2317
Alw26I GTCTC 5 cut(s) 460, 814, 2194, 2358, 2753
AlwI GGATC 8 cut(s) 140, 253, 543, 982, 1550, 3035, 3041, 3048
AlwNI CAGNNNCTG 3 cut(s) 924, 1070, 2873
Ama87I CYCGRG 2 cut(s) 798, 2943
Aor13HI TCCGGA 1 cut(s) 875
ApeKI GCWGC 8 cut(s) 128, 723, 734, 737, 746, 749, 1448, 2957
ApoI RAATTY 5 cut(s) 175, 392, 870, 1780, 2652
AseI ATTAAT 1 cut(s) 1716
Asp700I GAANNNNTTC 2 cut(s) 97, 1729
AspA2I CCTAGG 1 cut(s) 1691
AspLEI GCGC 3 cut(s) 823, 2367, 2703
AspS9I GGNCC 6 cut(s) 1004, 2320, 2520, 2543, 2793, 2801
AsuC2I CCSGG 1 cut(s) 2142
AsuHPI GGTGA 9 cut(s) 302, 782, 1235, 1518, 1985, 2105, 2130, 2303, 2485
AvaI CYCGRG 2 cut(s) 798, 2943
AvrII CCTAGG 1 cut(s) 1691
BalI TGGCCA 2 cut(s) 930, 2718
BamHI GGATCC 1 cut(s) 3040
BanI GGYRCC 1 cut(s) 2745
BarI GAAGNNNNNNTAC 1 cut(s) 32
BauI CACGAG 1 cut(s) 3012
Bbv12I GWGCWC 3 cut(s) 331, 859, 2317
BbvI GCAGC 8 cut(s) 115, 721, 735, 736, 749, 758, 1435, 2944
BceAI ACGGC 3 cut(s) 1730, 1903, 2664
BciT130I CCWGG 4 cut(s) 1675, 2548, 2638, 3087
BciVI GTATCC 1 cut(s) 2925
BclI TGATCA 4 cut(s) 307, 1110, 1789, 1810
BcnI CCSGG 1 cut(s) 2142
BcoDI GTCTC 5 cut(s) 460, 814, 2194, 2358, 2753
BcuI ACTAGT 3 cut(s) 1166, 1481, 2162
BfaI CTAG 9 cut(s) 57, 893, 942, 1167, 1482, 1533, 1614, 1692, 2163
BfmI CTRYAG 4 cut(s) 735, 750, 860, 1341
BfrI CTTAAG 2 cut(s) 220, 499
BfuAI ACCTGC 4 cut(s) 1055, 1846, 2279, 2461
BfuI GTATCC 1 cut(s) 2925
BglI GCCNNNNNGGC 1 cut(s) 1020
BglII AGATCT 2 cut(s) 59, 1570
BisI GCNGC 8 cut(s) 129, 724, 735, 738, 747, 750, 1449, 2958
BlnI CCTAGG 1 cut(s) 1691
BlsI GCNGC 8 cut(s) 130, 725, 736, 739, 748, 751, 1450, 2959
Bme1390I CCNGG 5 cut(s) 1675, 2142, 2548, 2638, 3087
BmeT110I CYCGRG 2 cut(s) 798, 2943
BmgBI CACGTC 1 cut(s) 614
BmgT120I GGNCC 6 cut(s) 1004, 2320, 2520, 2543, 2793, 2801
BmiI GGNNCC 6 cut(s) 105, 2103, 2227, 2545, 2747, 3042
BmrFI CCNGG 5 cut(s) 1675, 2142, 2548, 2638, 3087
BplI GAGNNNNNCTC 4 cut(s) 794, 826, 2299, 2331
BpmI CTGGAG 4 cut(s) 2028, 2219, 2301, 2416
Bpu10I CCTNAGC 2 cut(s) 432, 2316
BpuEI CTTGAG 3 cut(s) 484, 796, 2845
BpuMI CCSGG 1 cut(s) 2142
BsaBI GATNNNNATC 3 cut(s) 1554, 1569, 3045
BsaI GGTCTC 2 cut(s) 2194, 2358
BsaJI CCNNGG 5 cut(s) 1691, 2516, 2546, 3085, 3138
BsaWI WCCGGW 1 cut(s) 875
BsaXI ACNNNNNCTCC 4 cut(s) 1144, 1174, 1638, 1668
Bsc4I CCNNNNNNNGG 5 cut(s) 719, 1001, 1674, 2791, 2991
Bse1I ACTGG 6 cut(s) 120, 1273, 2202, 2284, 2433, 2895
Bse3DI GCAATG 3 cut(s) 816, 975, 1277
Bse8I GATNNNNATC 3 cut(s) 1554, 1569, 3045
BseAI TCCGGA 1 cut(s) 875
BseBI CCWGG 4 cut(s) 1675, 2548, 2638, 3087
BseDI CCNNGG 5 cut(s) 1691, 2516, 2546, 3085, 3138
BseJI GATNNNNATC 3 cut(s) 1554, 1569, 3045
BseLI CCNNNNNNNGG 5 cut(s) 719, 1001, 1674, 2791, 2991
BseMI GCAATG 3 cut(s) 816, 975, 1277
BseMII CTCAG 7 cut(s) 854, 1017, 1062, 1374, 1425, 2330, 2685
BseNI ACTGG 6 cut(s) 120, 1273, 2202, 2284, 2433, 2895
BseRI GAGGAG 4 cut(s) 245, 635, 1785, 2323
BseX3I CGGCCG 1 cut(s) 1916
BseXI GCAGC 8 cut(s) 115, 721, 735, 736, 749, 758, 1435, 2944
BseYI CCCAGC 1 cut(s) 1969
BsgI GTGCAG 2 cut(s) 780, 2307
Bsh1236I CGCG 1 cut(s) 823
Bsh1285I CGRYCG 1 cut(s) 1919
BshNI GGYRCC 1 cut(s) 2745
BsiEI CGRYCG 1 cut(s) 1919
BsiHKAI GWGCWC 3 cut(s) 331, 859, 2317
BsiHKCI CYCGRG 2 cut(s) 798, 2943
BsiSI CCGG 2 cut(s) 876, 2141
BslFI GGGAC 1 cut(s) 3007
BslI CCNNNNNNNGG 5 cut(s) 719, 1001, 1674, 2791, 2991
BsmAI GTCTC 5 cut(s) 460, 814, 2194, 2358, 2753
BsmFI GGGAC 1 cut(s) 3007
BsmI GAATGC 1 cut(s) 1731
Bso31I GGTCTC 2 cut(s) 2194, 2358
BsoBI CYCGRG 2 cut(s) 798, 2943
Bsp1286I GDGCHC 3 cut(s) 331, 859, 2317
Bsp13I TCCGGA 1 cut(s) 875
Bsp1407I TGTACA 1 cut(s) 2419
Bsp19I CCATGG 1 cut(s) 2516
BspACI CCGC 5 cut(s) 14, 283, 442, 1337, 2077
BspCNI CTCAG 7 cut(s) 853, 1018, 1063, 1375, 1426, 2329, 2686
BspEI TCCGGA 1 cut(s) 875
BspFNI CGCG 1 cut(s) 823
BspHI TCATGA 2 cut(s) 201, 2899
BspLI GGNNCC 6 cut(s) 105, 2103, 2227, 2545, 2747, 3042
BspMAI CTGCAG 3 cut(s) 739, 754, 864
BspMI ACCTGC 4 cut(s) 1055, 1846, 2279, 2461
BspPI GGATC 8 cut(s) 140, 253, 543, 982, 1550, 3035, 3041, 3048
BspT107I GGYRCC 1 cut(s) 2745
BspTI CTTAAG 2 cut(s) 220, 499
BspTNI GGTCTC 2 cut(s) 2194, 2358
BsrBI CCGCTC 1 cut(s) 442
BsrDI GCAATG 3 cut(s) 816, 975, 1277
BsrGI TGTACA 1 cut(s) 2419
BsrI ACTGG 6 cut(s) 120, 1273, 2202, 2284, 2433, 2895
BssECI CCNNGG 5 cut(s) 1691, 2516, 2546, 3085, 3138
BssSI CACGAG 1 cut(s) 3012
BssT1I CCWWGG 3 cut(s) 1691, 2516, 3138
Bst2BI CACGAG 1 cut(s) 3012
Bst2UI CCWGG 4 cut(s) 1675, 2548, 2638, 3087
Bst4CI ACNGT 8 cut(s) 40, 926, 1138, 1373, 1939, 2074, 2610, 2869
Bst6I CTCTTC 4 cut(s) 310, 348, 585, 612
BstAFI CTTAAG 2 cut(s) 220, 499
BstAPI GCANNNNNTGC 1 cut(s) 758
BstAUI TGTACA 1 cut(s) 2419
BstC8I GCNNGC 7 cut(s) 721, 759, 855, 920, 1881, 1904, 1908
BstDSI CCRYGG 1 cut(s) 2516
BstENI CCTNNNNNAGG 1 cut(s) 1672
BstFNI CGCG 1 cut(s) 823
BstHHI GCGC 3 cut(s) 823, 2367, 2703
BstMAI GTCTC 5 cut(s) 460, 814, 2194, 2358, 2753
BstMCI CGRYCG 1 cut(s) 1919
BstMWI GCNNNNNNNGC 9 cut(s) 62, 125, 415, 743, 746, 758, 859, 1020, 1763
BstNI CCWGG 4 cut(s) 1675, 2548, 2638, 3087
BstNSI RCATGY 1 cut(s) 1286
BstSCI CCNGG 5 cut(s) 1673, 2140, 2546, 2636, 3085
BstSFI CTRYAG 4 cut(s) 735, 750, 860, 1341
BstUI CGCG 1 cut(s) 823
BstV1I GCAGC 8 cut(s) 115, 721, 735, 736, 749, 758, 1435, 2944
BstX2I RGATCY 5 cut(s) 59, 145, 1570, 3040, 3046
BstYI RGATCY 5 cut(s) 59, 145, 1570, 3040, 3046
BstZI CGGCCG 1 cut(s) 1916
BsuI GTATCC 1 cut(s) 2925
BtgI CCRYGG 1 cut(s) 2516
BtgZI GCGATG 1 cut(s) 2544
BtrI CACGTC 1 cut(s) 614
BtsI GCAGTG 4 cut(s) 759, 857, 987, 1520
BveI ACCTGC 4 cut(s) 1055, 1846, 2279, 2461
Cac8I GCNNGC 7 cut(s) 721, 759, 855, 920, 1881, 1904, 1908
CaiI CAGNNNCTG 3 cut(s) 924, 1070, 2873
CciI TCATGA 2 cut(s) 201, 2899
CfoI GCGC 3 cut(s) 823, 2367, 2703
Cfr13I GGNCC 6 cut(s) 1004, 2320, 2520, 2543, 2793, 2801
CseI GACGC 2 cut(s) 681, 812
Csp6I GTAC 4 cut(s) 17, 446, 458, 2420
CviQI GTAC 4 cut(s) 17, 446, 458, 2420
DraIII CACNNNGTG 1 cut(s) 2849
EaeI YGGCCR 4 cut(s) 928, 1743, 1916, 2716
EagI CGGCCG 1 cut(s) 1916
Eam1104I CTCTTC 4 cut(s) 310, 348, 585, 612
EarI CTCTTC 4 cut(s) 310, 348, 585, 612
EciI GGCGGA 1 cut(s) 272
EclXI CGGCCG 1 cut(s) 1916
Eco130I CCWWGG 3 cut(s) 1691, 2516, 3138
Eco147I AGGCCT 1 cut(s) 1879
Eco31I GGTCTC 2 cut(s) 2194, 2358
Eco52I CGGCCG 1 cut(s) 1916
Eco57I CTGAAG 2 cut(s) 1521, 2615
Eco88I CYCGRG 2 cut(s) 798, 2943
EcoNI CCTNNNNNAGG 1 cut(s) 1672
EcoRII CCWGG 4 cut(s) 1673, 2546, 2636, 3085
EcoT14I CCWWGG 3 cut(s) 1691, 2516, 3138
EcoT22I ATGCAT 2 cut(s) 1357, 1398
ErhI CCWWGG 3 cut(s) 1691, 2516, 3138
FaqI GGGAC 1 cut(s) 3007
FauI CCCGC 1 cut(s) 435
FauNDI CATATG 1 cut(s) 2209
FbaI TGATCA 4 cut(s) 307, 1110, 1789, 1810
FblI GTMKAC 1 cut(s) 2271
Fnu4HI GCNGC 8 cut(s) 129, 724, 735, 738, 747, 750, 1449, 2958
Fsp4HI GCNGC 8 cut(s) 129, 724, 735, 738, 747, 750, 1449, 2958
FspBI CTAG 9 cut(s) 57, 893, 942, 1167, 1482, 1533, 1614, 1692, 2163
GlaI GCGC 3 cut(s) 822, 2366, 2702
GluI GCNGC 8 cut(s) 129, 724, 735, 738, 747, 750, 1449, 2958
GsaI CCCAGC 1 cut(s) 1973
GsuI CTGGAG 4 cut(s) 2028, 2219, 2301, 2416
HapII CCGG 2 cut(s) 876, 2141
HgaI GACGC 2 cut(s) 681, 812
HhaI GCGC 3 cut(s) 823, 2367, 2703
Hin6I GCGC 3 cut(s) 821, 2365, 2701
HinP1I GCGC 3 cut(s) 821, 2365, 2701
HincII GTYRAC 2 cut(s) 846, 2841
HindII GTYRAC 2 cut(s) 846, 2841
HindIII AAGCTT 1 cut(s) 2495
HpaI GTTAAC 1 cut(s) 846
HpaII CCGG 2 cut(s) 876, 2141
HphI GGTGA 9 cut(s) 302, 782, 1235, 1518, 1985, 2105, 2130, 2303, 2485
Hpy166II GTNNAC 7 cut(s) 19, 846, 1274, 2147, 2249, 2272, 2841
Hpy8I GTNNAC 7 cut(s) 19, 846, 1274, 2147, 2249, 2272, 2841
Hpy99I CGWCG 2 cut(s) 828, 2990
HpyCH4III ACNGT 8 cut(s) 40, 926, 1138, 1373, 1939, 2074, 2610, 2869
HpyCH4IV ACGT 2 cut(s) 613, 2837
HpyF10VI GCNNNNNNNGC 9 cut(s) 62, 125, 415, 743, 746, 758, 859, 1020, 1763
HpySE526I ACGT 2 cut(s) 613, 2837
HspAI GCGC 3 cut(s) 821, 2365, 2701
Kpn2I TCCGGA 1 cut(s) 875
Ksp22I TGATCA 4 cut(s) 307, 1110, 1789, 1810
KspAI GTTAAC 1 cut(s) 846
LmnI GCTCC 5 cut(s) 109, 878, 1303, 2231, 3103
Lsp1109I GCAGC 8 cut(s) 115, 721, 735, 736, 749, 758, 1435, 2944
MaeI CTAG 9 cut(s) 57, 893, 942, 1167, 1482, 1533, 1614, 1692, 2163
MaeII ACGT 2 cut(s) 613, 2837
MaeIII GTNAC 5 cut(s) 566, 1195, 2174, 2489, 3056
MbiI CCGCTC 1 cut(s) 442
MfeI CAATTG 2 cut(s) 1206, 2357
MflI RGATCY 5 cut(s) 59, 145, 1570, 3040, 3046
MhlI GDGCHC 3 cut(s) 331, 859, 2317
MlsI TGGCCA 2 cut(s) 930, 2718
MluNI TGGCCA 2 cut(s) 930, 2718
MlyI GAGTC 4 cut(s) 462, 816, 1394, 2549
MmeI TCCRAC 2 cut(s) 121, 1015
Mox20I TGGCCA 2 cut(s) 930, 2718
Mph1103I ATGCAT 2 cut(s) 1357, 1398
MroI TCCGGA 1 cut(s) 875
MroXI GAANNNNTTC 2 cut(s) 97, 1729
MscI TGGCCA 2 cut(s) 930, 2718
MseI TTAA 8 cut(s) 221, 500, 602, 698, 845, 1430, 1716, 3006
MslI CAYNNNNRTG 3 cut(s) 155, 980, 3065
Msp20I TGGCCA 2 cut(s) 930, 2718
MspA1I CMGCKG 5 cut(s) 128, 740, 749, 1463, 1475
MspCI CTTAAG 2 cut(s) 220, 499
MspI CCGG 2 cut(s) 876, 2141
MspR9I CCNGG 5 cut(s) 1675, 2142, 2548, 2638, 3087
MunI CAATTG 2 cut(s) 1206, 2357
Mva1269I GAATGC 1 cut(s) 1731
MvaI CCWGG 4 cut(s) 1675, 2548, 2638, 3087
MvnI CGCG 1 cut(s) 823
MwoI GCNNNNNNNGC 9 cut(s) 62, 125, 415, 743, 746, 758, 859, 1020, 1763
NciI CCSGG 1 cut(s) 2142
NcoI CCATGG 1 cut(s) 2516
NdeI CATATG 1 cut(s) 2209
NlaIV GGNNCC 6 cut(s) 105, 2103, 2227, 2545, 2747, 3042
NmeAIII GCCGAG 3 cut(s) 829, 1894, 2978
NmuCI GTSAC 1 cut(s) 2489
NsiI ATGCAT 2 cut(s) 1357, 1398
NspI RCATGY 1 cut(s) 1286
OliI CACNNNNGTG 1 cut(s) 3065
PaeR7I CTCGAG 2 cut(s) 798, 2943
PagI TCATGA 2 cut(s) 201, 2899
PaqCI CACCTGC 2 cut(s) 2279, 2461
PceI AGGCCT 1 cut(s) 1879
PcsI WCGNNNNNNNCGW 1 cut(s) 2950
PctI GAATGC 1 cut(s) 1731
PdmI GAANNNNTTC 2 cut(s) 97, 1729
PkrI GCNGC 8 cut(s) 130, 725, 736, 739, 748, 751, 1450, 2959
PleI GAGTC 4 cut(s) 462, 815, 1393, 2549
PpsI GAGTC 4 cut(s) 462, 815, 1393, 2549
PshBI ATTAAT 1 cut(s) 1716
Psp6I CCWGG 4 cut(s) 1673, 2546, 2636, 3085
PspFI CCCAGC 1 cut(s) 1969
PspGI CCWGG 4 cut(s) 1673, 2546, 2636, 3085
PspN4I GGNNCC 6 cut(s) 105, 2103, 2227, 2545, 2747, 3042
PspPI GGNCC 6 cut(s) 1004, 2320, 2520, 2543, 2793, 2801
PspXI VCTCGAGB 1 cut(s) 2943
PstI CTGCAG 3 cut(s) 739, 754, 864
PstNI CAGNNNCTG 3 cut(s) 924, 1070, 2873
PsuI RGATCY 5 cut(s) 59, 145, 1570, 3040, 3046
PvuII CAGCTG 5 cut(s) 128, 740, 749, 1463, 1475
RsaI GTAC 4 cut(s) 18, 447, 459, 2421
RsaNI GTAC 4 cut(s) 17, 446, 458, 2420
RseI CAYNNNNRTG 3 cut(s) 155, 980, 3065
SaqAI TTAA 8 cut(s) 221, 500, 602, 698, 845, 1430, 1716, 3006
SatI GCNGC 8 cut(s) 129, 724, 735, 738, 747, 750, 1449, 2958
Sau96I GGNCC 6 cut(s) 1004, 2320, 2520, 2543, 2793, 2801
SchI GAGTC 4 cut(s) 462, 816, 1394, 2549
ScrFI CCNGG 5 cut(s) 1675, 2142, 2548, 2638, 3087
SduI GDGCHC 3 cut(s) 331, 859, 2317
SfcI CTRYAG 4 cut(s) 735, 750, 860, 1341
Sfr274I CTCGAG 2 cut(s) 798, 2943
SlaI CTCGAG 2 cut(s) 798, 2943
SmiMI CAYNNNNRTG 3 cut(s) 155, 980, 3065
SmlI CTYRAG 7 cut(s) 220, 463, 499, 798, 811, 2860, 2943
SmoI CTYRAG 7 cut(s) 220, 463, 499, 798, 811, 2860, 2943
SpeI ACTAGT 3 cut(s) 1166, 1481, 2162
SseBI AGGCCT 1 cut(s) 1879
SsiI CCGC 5 cut(s) 14, 283, 442, 1337, 2077
SspI AATATT 3 cut(s) 342, 1056, 1610
SspMI CTAG 9 cut(s) 57, 893, 942, 1167, 1482, 1533, 1614, 1692, 2163
StuI AGGCCT 1 cut(s) 1879
StyD4I CCNGG 5 cut(s) 1673, 2140, 2546, 2636, 3085
StyI CCWWGG 3 cut(s) 1691, 2516, 3138
TaaI ACNGT 8 cut(s) 40, 926, 1138, 1373, 1939, 2074, 2610, 2869
TaiI ACGT 2 cut(s) 616, 2840
TaqI TCGA 6 cut(s) 799, 1242, 2020, 2344, 2662, 2944
TatI WGTACW 1 cut(s) 2419
Tru1I TTAA 8 cut(s) 221, 500, 602, 698, 845, 1430, 1716, 3006
Tru9I TTAA 8 cut(s) 221, 500, 602, 698, 845, 1430, 1716, 3006
TseFI GTSAC 1 cut(s) 2489
TseI GCWGC 8 cut(s) 128, 723, 734, 737, 746, 749, 1448, 2957
Tsp45I GTSAC 1 cut(s) 2489
TspGWI ACGGA 3 cut(s) 2024, 2118, 2974
Vha464I CTTAAG 2 cut(s) 220, 499
VspI ATTAAT 1 cut(s) 1716
XagI CCTNNNNNAGG 1 cut(s) 1672
XapI RAATTY 5 cut(s) 175, 392, 870, 1780, 2652
XbaI TCTAGA 2 cut(s) 892, 1532
XceI RCATGY 1 cut(s) 1286
XcmI CCANNNNNNNNNTGG 2 cut(s) 998, 1463
XhoI CTCGAG 2 cut(s) 798, 2943
XmaJI CCTAGG 1 cut(s) 1691
XmiI GTMKAC 1 cut(s) 2271
XmnI GAANNNNTTC 2 cut(s) 97, 1729
XspI CTAG 9 cut(s) 57, 893, 942, 1167, 1482, 1533, 1614, 1692, 2163
Zsp2I ATGCAT 2 cut(s) 1357, 1398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.