Rorug05G0486200

Belongs to the peptidase C2 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0007783
Physical Location & Seq
Reverse (-)
66972028 .. 66975037
3010 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0486200.1

Sequence Viewer

Length: 1341 bp
ATGCGAGAGATTCTTCACATTCAGGGAGGCCAATGCGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTCGTCTGCGCCGAGCACGGCATCGACCCAACCGGAAGGTACACCGGCGACTCCGAGCTTCAGCTTGAGAGGGTGAACGTCTACTACAACGAAGCCAGCGGCGGGAGGTATGTACCACGCGCCGTCCTCATGGATCTGGAGCCTGGGACCATGGACAGCGTCAGATCTGGACTCTACGGTCAGATCTTCCGTCCTGATAACTTCGTCTTCGGTCAGTCTGGTGCGGGAAACAACTGGGCCAAAGGTCACTACACCGAGGGGGCTGAGTTGATCGATTCGGTTCTTGATGTGGTGCGAAAGGAGGCCGAGAACTGTGACTGCTTGCAAGGGTTCCAGGTGTGCCATTCTTTGGGTGGTGGTACTGGATCTGGAATGGGAACACTTCTGATTTCAAAGATTAGGGAGGAGTACCCAGATCGGATGATGATGACCTTCTCTGTGTTCCCATCTCCCAAGGTCTCAGATACTGTTGTGGAGCCTTACAATGCTACTTTGTCTGTTCATCAGCTTGTAGAGAACGCAGATGAGTGTATGGTGCTTGACAATGAGGCTCTCTATGACATTTGCTTCCGCACACTTAAACTCACTACCCCCAGCTTTGGTGATTTGAATCACTTGATCTCTGCAACAATGTCTGGAGTCACCTGCTGCCTAAGGTTCCCTGGACAGCTTAACTCTGATTTGCGCAAGCTTGCTGTTAACCTCATCCCCTTCCCTCGTCTTCACTTTTTCATGGTCGGTTTTGCTCCTCTGACCTCAAGAGGGTCTCAGCAGTACAGAGCTTTGACTGTCCCAGAACTCACCCAACAAATGTGGGATTCCAAGAACATGATGTGTGCTGCTGATCCCCGACATGGAAGGTACCTCACAGCATCAGCCATGTTCCGTGGTAAGATGAGCACCAAGGAAGTGGATGACCAGATGATGAATGTCCAGAACAAGAACTCTTCCTACTTTGTTGAGTGGATCCCCAACAACGTCAAGTCAACAGTCTGTGACATCCCACCAACTGGTCTCAAGATGGCATCAACTTTCATCGGAAACTCTACATCCATTCAAGAGATGTTCAGGAGGGTGAGTGAGCAGTTCACTGCTATGTTCAGGAGGAAGGCTTTCTTGCATTGGTACACTGGTGAAGGCATGGACGAGATGGAATTCACCGAAGCTGAGAGCAACATGAATGATCTGGTGTCAGAATATCAGCAGTACCAGGATGCCACCGCTGATGAGGACGAGTATGAAGATGAACAGGGAGAGTATGAGGAGGAAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001558 GO:0001708 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004198 GO:0005198 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0005829 GO:0005886 GO:0005887 GO:0006275 GO:0006355 GO:0006508 GO:0006807 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007204 GO:0007275 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008307 GO:0009628 GO:0009651 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009966 GO:0009987 GO:0010008 GO:0010035 GO:0010038 GO:0010154 GO:0010468 GO:0010522 GO:0010524 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010927 GO:0010941 GO:0010959 GO:0012505 GO:0014717 GO:0014718 GO:0014823 GO:0014850 GO:0016020 GO:0016021 GO:0016043 GO:0016787 GO:0019219 GO:0019222 GO:0019538 GO:0019725 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030036 GO:0030154 GO:0030162 GO:0030234 GO:0030239 GO:0030315 GO:0031032 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031402 GO:0031410 GO:0031420 GO:0031432 GO:0031674 GO:0031982 GO:0031984 GO:0032101 GO:0032268 GO:0032269 GO:0032270 GO:0032501 GO:0032502 GO:0032875 GO:0032877 GO:0032879 GO:0032947 GO:0032989 GO:0032991 GO:0033036 GO:0033233 GO:0033234 GO:0033554 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0040008 GO:0042127 GO:0042175 GO:0042221 GO:0042383 GO:0042592 GO:0042692 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043122 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043269 GO:0043270 GO:0043292 GO:0043415 GO:0043416 GO:0043933 GO:0044085 GO:0044093 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044449 GO:0044459 GO:0044464 GO:0045165 GO:0045214 GO:0045740 GO:0045787 GO:0045862 GO:0045892 GO:0045893 GO:0045927 GO:0045934 GO:0045935 GO:0046872 GO:0048316 GO:0048468 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048638 GO:0048639 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050801 GO:0050865 GO:0050867 GO:0050896 GO:0051049 GO:0051050 GO:0051052 GO:0051054 GO:0051090 GO:0051091 GO:0051092 GO:0051094 GO:0051128 GO:0051146 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051239 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051279 GO:0051281 GO:0051282 GO:0051480 GO:0051592 GO:0051641 GO:0051716 GO:0051726 GO:0051924 GO:0051928 GO:0055001 GO:0055002 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055103 GO:0060255 GO:0060341 GO:0060548 GO:0061041 GO:0061061 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0065009 GO:0070011 GO:0070727 GO:0070887 GO:0070925 GO:0071214 GO:0071241 GO:0071248 GO:0071277 GO:0071470 GO:0071472 GO:0071704 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072657 GO:0080050 GO:0080090 GO:0080134 GO:0090068 GO:0090303 GO:0090329 GO:0090392 GO:0090627 GO:0090628 GO:0097264 GO:0097435 GO:0097708 GO:0098588 GO:0098771 GO:0098772 GO:0098805 GO:0098827 GO:0099080 GO:0099081 GO:0099512 GO:0104004 GO:0140096 GO:1901564 GO:1902531 GO:1902679 GO:1902680 GO:1903034 GO:1903036 GO:1903169 GO:1903320 GO:1903321 GO:1903506 GO:1903507 GO:1903508 GO:1904062 GO:1904064 GO:1904427 GO:2000011 GO:2000014 GO:2000024 GO:2000026 GO:2000105 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Calpain_III Peptidase_C2

Protein Analysis

446

Amino Acids

50.25

Weight (kDa)

4.75

Isoelectric Point (pI)

35.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 3 - 211 1.9e-64 Tubulin/FtsZ family, GTPase domain
Tubulin_C PF03953 261 - 382 1.6e-40 Tubulin C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 719
AasI GACNNNNNNGTC 1 cut(s) 243
Acc16I TGCGCA 1 cut(s) 752
Acc36I ACCTGC 1 cut(s) 719
Acc65I GGTACC 1 cut(s) 927
AccB1I GGYRCC 1 cut(s) 927
AccB7I CCANNNNNTGG 3 cut(s) 60, 415, 1076
AccI GTMKAC 1 cut(s) 147
AccII CGCG 1 cut(s) 186
AciI CCGC 6 cut(s) 36, 165, 168, 290, 637, 1287
AclWI GGATC 5 cut(s) 207, 439, 905, 1027, 1040
AcsI RAATTY 1 cut(s) 1220
AcuI CTGAAG 1 cut(s) 110
AfaI GTAC 8 cut(s) 107, 180, 427, 476, 842, 929, 1193, 1274
AfiI CCNNNNNNNGG 7 cut(s) 60, 168, 415, 665, 828, 920, 1076
AgsI TTSAA 3 cut(s) 459, 676, 1124
AjnI CCWGG 4 cut(s) 208, 399, 727, 1275
AluBI AGCT 8 cut(s) 124, 130, 574, 663, 736, 757, 848, 1232
AluI AGCT 8 cut(s) 124, 130, 574, 663, 736, 757, 848, 1232
Alw21I GWGCWC 2 cut(s) 84, 968
Alw26I GTCTC 3 cut(s) 529, 837, 1085
AlwI GGATC 5 cut(s) 207, 439, 905, 1027, 1040
AlwNI CAGNNNCTG 1 cut(s) 533
AoxI GGCC 3 cut(s) 28, 303, 369
ApeKI GCWGC 2 cut(s) 714, 905
ApoI RAATTY 1 cut(s) 1220
Asp700I GAANNNNTTC 1 cut(s) 1178
Asp718I GGTACC 1 cut(s) 927
AspLEI GCGC 3 cut(s) 77, 188, 753
AspS9I GGNCC 2 cut(s) 213, 303
AsuHPI GGTGA 7 cut(s) 151, 680, 700, 859, 1153, 1211, 1216
AvaII GGWCC 1 cut(s) 213
AxyI CCTNAGG 1 cut(s) 719
BaeI ACNNNNGTAYC 4 cut(s) 522, 555, 1183, 1216
BamHI GGATCC 1 cut(s) 1032
BanI GGYRCC 1 cut(s) 927
BbsI GAAGAC 2 cut(s) 265, 779
Bbv12I GWGCWC 2 cut(s) 84, 968
BbvI GCAGC 2 cut(s) 701, 892
BccI CCATC 3 cut(s) 520, 1081, 1210
BceAI ACGGC 2 cut(s) 100, 173
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BciT130I CCWGG 4 cut(s) 210, 401, 729, 1277
BcoDI GTCTC 3 cut(s) 529, 837, 1085
BfuAI ACCTGC 1 cut(s) 719
BglI GCCNNNNNGGC 1 cut(s) 36
BglII AGATCT 2 cut(s) 230, 249
BisI GCNGC 4 cut(s) 37, 166, 715, 906
BlsI GCNGC 4 cut(s) 38, 167, 716, 907
Bme1390I CCNGG 4 cut(s) 210, 401, 729, 1277
Bme18I GGWCC 1 cut(s) 213
BmgT120I GGNCC 2 cut(s) 213, 303
BmiI GGNNCC 8 cut(s) 52, 207, 214, 398, 543, 725, 929, 1034
BmrFI CCNGG 4 cut(s) 210, 401, 729, 1277
BmrI ACTGGG 1 cut(s) 310
BmsI GCATC 4 cut(s) 96, 947, 1100, 1270
BmuI ACTGGG 1 cut(s) 310
BpiI GAAGAC 2 cut(s) 265, 779
BpmI CTGGAG 2 cut(s) 224, 723
BpuEI CTTGAG 3 cut(s) 152, 808, 1067
Bsa29I ATCGAT 1 cut(s) 339
BsaBI GATNNNNATC 1 cut(s) 675
BsaI GGTCTC 3 cut(s) 529, 837, 1085
BsaJI CCNNGG 7 cut(s) 209, 216, 321, 519, 727, 952, 969
BsaWI WCCGGW 1 cut(s) 98
BsaXI ACNNNNNCTCC 3 cut(s) 1129, 1159, 1322
Bsc4I CCNNNNNNNGG 7 cut(s) 60, 168, 415, 665, 828, 920, 1076
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 4 cut(s) 305, 433, 1081, 1201
Bse21I CCTNAGG 1 cut(s) 719
Bse8I GATNNNNATC 1 cut(s) 675
BseBI CCWGG 4 cut(s) 210, 401, 729, 1277
BseCI ATCGAT 1 cut(s) 339
BseDI CCNNGG 7 cut(s) 209, 216, 321, 519, 727, 952, 969
BseGI GGATG 6 cut(s) 492, 771, 985, 1065, 1115, 1285
BseJI GATNNNNATC 1 cut(s) 675
BseLI CCNNNNNNNGG 7 cut(s) 60, 168, 415, 665, 828, 920, 1076
BseMII CTCAG 4 cut(s) 321, 540, 848, 1224
BseNI ACTGG 4 cut(s) 305, 433, 1081, 1201
BseRI GAGGAG 2 cut(s) 485, 804
BseXI GCAGC 2 cut(s) 701, 892
BseYI CCCAGC 1 cut(s) 659
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 3 cut(s) 30, 305, 371
BshNI GGYRCC 1 cut(s) 927
BshVI ATCGAT 1 cut(s) 339
BsiHKAI GWGCWC 2 cut(s) 84, 968
BsiSI CCGG 2 cut(s) 99, 111
BslFI GGGAC 2 cut(s) 226, 842
BslI CCNNNNNNNGG 7 cut(s) 60, 168, 415, 665, 828, 920, 1076
BsmAI GTCTC 3 cut(s) 529, 837, 1085
BsmFI GGGAC 2 cut(s) 226, 842
BsnI GGCC 3 cut(s) 30, 305, 371
Bso31I GGTCTC 3 cut(s) 529, 837, 1085
Bsp1286I GDGCHC 2 cut(s) 84, 968
Bsp19I CCATGG 1 cut(s) 216
BspACI CCGC 6 cut(s) 36, 165, 168, 290, 637, 1287
BspANI GGCC 3 cut(s) 30, 305, 371
BspCNI CTCAG 4 cut(s) 322, 539, 847, 1225
BspDI ATCGAT 1 cut(s) 339
BspFNI CGCG 1 cut(s) 186
BspLI GGNNCC 8 cut(s) 52, 207, 214, 398, 543, 725, 929, 1034
BspMI ACCTGC 1 cut(s) 719
BspPI GGATC 5 cut(s) 207, 439, 905, 1027, 1040
BspT107I GGYRCC 1 cut(s) 927
BspTNI GGTCTC 3 cut(s) 529, 837, 1085
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 4 cut(s) 305, 433, 1081, 1201
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 7 cut(s) 209, 216, 321, 519, 727, 952, 969
BssT1I CCWWGG 3 cut(s) 216, 519, 969
Bst2UI CCWGG 4 cut(s) 210, 401, 729, 1277
Bst4CI ACNGT 5 cut(s) 245, 380, 535, 856, 1057
Bst6I CTCTTC 1 cut(s) 1018
BstC8I GCNNGC 4 cut(s) 163, 389, 755, 759
BstDEI CTNAG 5 cut(s) 330, 526, 719, 834, 1233
BstDSI CCRYGG 2 cut(s) 216, 952
BstF5I GGATG 6 cut(s) 492, 771, 985, 1065, 1115, 1285
BstFNI CGCG 1 cut(s) 186
BstHHI GCGC 3 cut(s) 77, 188, 753
BstMAI GTCTC 3 cut(s) 529, 837, 1085
BstMWI GCNNNNNNNGC 1 cut(s) 36
BstNI CCWGG 4 cut(s) 210, 401, 729, 1277
BstSCI CCNGG 4 cut(s) 208, 399, 727, 1275
BstUI CGCG 1 cut(s) 186
BstV1I GCAGC 2 cut(s) 701, 892
BstV2I GAAGAC 2 cut(s) 265, 779
BstX2I RGATCY 5 cut(s) 199, 230, 249, 431, 1032
BstXI CCANNNNNNTGG 1 cut(s) 976
BstYI RGATCY 5 cut(s) 199, 230, 249, 431, 1032
Bsu15I ATCGAT 1 cut(s) 339
Bsu36I CCTNAGG 1 cut(s) 719
BsuRI GGCC 3 cut(s) 30, 305, 371
BsuTUI ATCGAT 1 cut(s) 339
BtgI CCRYGG 2 cut(s) 216, 952
BtsCI GGATG 6 cut(s) 492, 771, 985, 1065, 1115, 1285
BtsI GCAGTG 1 cut(s) 1155
BtsIMutI CAGTG 2 cut(s) 1155, 1194
BveI ACCTGC 1 cut(s) 719
Cac8I GCNNGC 4 cut(s) 163, 389, 755, 759
CaiI CAGNNNCTG 1 cut(s) 533
CfoI GCGC 3 cut(s) 77, 188, 753
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 2 cut(s) 213, 303
ClaI ATCGAT 1 cut(s) 339
CseI GACGC 1 cut(s) 214
Csp6I GTAC 8 cut(s) 106, 179, 426, 475, 841, 928, 1192, 1273
CspCI CAANNNNNGTGG 2 cut(s) 860, 895
CviAII CATG 8 cut(s) 196, 217, 799, 895, 920, 946, 1207, 1243
CviQI GTAC 8 cut(s) 106, 179, 426, 475, 841, 928, 1192, 1273
DdeI CTNAG 5 cut(s) 330, 526, 719, 834, 1233
DrdI GACNNNNNNGTC 1 cut(s) 243
DseDI GACNNNNNNGTC 1 cut(s) 243
Eam1104I CTCTTC 1 cut(s) 1018
EarI CTCTTC 1 cut(s) 1018
Eco130I CCWWGG 3 cut(s) 216, 519, 969
Eco31I GGTCTC 3 cut(s) 529, 837, 1085
Eco47I GGWCC 1 cut(s) 213
Eco57I CTGAAG 1 cut(s) 110
Eco81I CCTNAGG 1 cut(s) 719
EcoRI GAATTC 1 cut(s) 1220
EcoRII CCWGG 4 cut(s) 208, 399, 727, 1275
EcoT14I CCWWGG 3 cut(s) 216, 519, 969
ErhI CCWWGG 3 cut(s) 216, 519, 969
FaeI CATG 8 cut(s) 199, 220, 802, 898, 923, 949, 1210, 1246
FalI AAGNNNNNCTT 2 cut(s) 1166, 1198
FaqI GGGAC 2 cut(s) 226, 842
FatI CATG 8 cut(s) 195, 216, 798, 894, 919, 945, 1206, 1242
FauI CCCGC 2 cut(s) 161, 283
FblI GTMKAC 1 cut(s) 147
Fnu4HI GCNGC 4 cut(s) 37, 166, 715, 906
FokI GGATG 6 cut(s) 499, 758, 992, 1052, 1102, 1292
Fsp4HI GCNGC 4 cut(s) 37, 166, 715, 906
FspI TGCGCA 1 cut(s) 752
GlaI GCGC 3 cut(s) 76, 187, 752
GluI GCNGC 4 cut(s) 37, 166, 715, 906
GsaI CCCAGC 1 cut(s) 663
GsuI CTGGAG 2 cut(s) 224, 723
HaeIII GGCC 3 cut(s) 30, 305, 371
HapII CCGG 2 cut(s) 99, 111
HgaI GACGC 1 cut(s) 214
HhaI GCGC 3 cut(s) 77, 188, 753
Hin1II CATG 8 cut(s) 199, 220, 802, 898, 923, 949, 1210, 1246
Hin6I GCGC 3 cut(s) 75, 186, 751
HinP1I GCGC 3 cut(s) 75, 186, 751
HincII GTYRAC 2 cut(s) 766, 1053
HindII GTYRAC 2 cut(s) 766, 1053
HindIII AAGCTT 1 cut(s) 755
HinfI GANTC 7 cut(s) 10, 116, 237, 341, 676, 705, 884
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 2 cut(s) 99, 111
HphI GGTGA 7 cut(s) 151, 680, 700, 859, 1153, 1211, 1216
Hpy166II GTNNAC 7 cut(s) 108, 142, 148, 766, 1053, 1155, 1194
Hpy8I GTNNAC 7 cut(s) 108, 142, 148, 766, 1053, 1155, 1194
HpyAV CCTTC 6 cut(s) 96, 508, 787, 918, 1168, 1196
HpyCH4III ACNGT 5 cut(s) 245, 380, 535, 856, 1057
HpyCH4IV ACGT 2 cut(s) 144, 1044
HpyCH4V TGCA 3 cut(s) 391, 692, 1186
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
HpyF3I CTNAG 5 cut(s) 330, 526, 719, 834, 1233
HpySE526I ACGT 2 cut(s) 144, 1044
Hsp92II CATG 8 cut(s) 199, 220, 802, 898, 923, 949, 1210, 1246
HspAI GCGC 3 cut(s) 75, 186, 751
KpnI GGTACC 1 cut(s) 931
KspAI GTTAAC 1 cut(s) 766
LmnI GCTCC 4 cut(s) 50, 205, 541, 817
Lsp1109I GCAGC 2 cut(s) 701, 892
LweI GCATC 4 cut(s) 96, 947, 1100, 1270
MaeII ACGT 2 cut(s) 144, 1044
MaeIII GTNAC 4 cut(s) 311, 380, 706, 1061
MboII GAAGA 6 cut(s) 5, 244, 265, 779, 1005, 1319
MflI RGATCY 5 cut(s) 199, 230, 249, 431, 1032
MhlI GDGCHC 2 cut(s) 84, 968
MluCI AATT 1 cut(s) 1220
MlyI GAGTC 3 cut(s) 110, 231, 714
MroXI GAANNNNTTC 1 cut(s) 1178
MseI TTAA 3 cut(s) 645, 738, 765
MslI CAYNNNNRTG 1 cut(s) 1160
MspA1I CMGCKG 2 cut(s) 165, 1289
MspI CCGG 2 cut(s) 99, 111
MspR9I CCNGG 4 cut(s) 210, 401, 729, 1277
MvaI CCWGG 4 cut(s) 210, 401, 729, 1277
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 1 cut(s) 36
NcoI CCATGG 1 cut(s) 216
NlaIII CATG 8 cut(s) 199, 220, 802, 898, 923, 949, 1210, 1246
NlaIV GGNNCC 8 cut(s) 52, 207, 214, 398, 543, 725, 929, 1034
NmeAIII GCCGAG 2 cut(s) 103, 397
NmuCI GTSAC 4 cut(s) 311, 380, 706, 1061
NsbI TGCGCA 1 cut(s) 752
PaqCI CACCTGC 1 cut(s) 719
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 1178
PfeI GAWTC 4 cut(s) 10, 341, 676, 884
PflFI GACNNNGTC 1 cut(s) 224
PflMI CCANNNNNTGG 3 cut(s) 60, 415, 1076
PkrI GCNGC 4 cut(s) 38, 167, 716, 907
PleI GAGTC 3 cut(s) 110, 231, 713
PpsI GAGTC 3 cut(s) 110, 231, 713
Psp6I CCWGG 4 cut(s) 208, 399, 727, 1275
PspFI CCCAGC 1 cut(s) 659
PspGI CCWGG 4 cut(s) 208, 399, 727, 1275
PspN4I GGNNCC 8 cut(s) 52, 207, 214, 398, 543, 725, 929, 1034
PspPI GGNCC 2 cut(s) 213, 303
PsrI GAACNNNNNNTAC 4 cut(s) 134, 166, 1001, 1033
PstNI CAGNNNCTG 1 cut(s) 533
PsuI RGATCY 5 cut(s) 199, 230, 249, 431, 1032
PsyI GACNNNGTC 1 cut(s) 224
RsaI GTAC 8 cut(s) 107, 180, 427, 476, 842, 929, 1193, 1274
RsaNI GTAC 8 cut(s) 106, 179, 426, 475, 841, 928, 1192, 1273
RseI CAYNNNNRTG 1 cut(s) 1160
SaqAI TTAA 3 cut(s) 645, 738, 765
SatI GCNGC 4 cut(s) 37, 166, 715, 906
Sau96I GGNCC 2 cut(s) 213, 303
SchI GAGTC 3 cut(s) 110, 231, 714
ScrFI CCNGG 4 cut(s) 210, 401, 729, 1277
SduI GDGCHC 2 cut(s) 84, 968
SfaNI GCATC 4 cut(s) 96, 947, 1100, 1270
SgrAI CRCCGGYG 1 cut(s) 110
SinI GGWCC 1 cut(s) 213
SmiMI CAYNNNNRTG 1 cut(s) 1160
SmlI CTYRAG 3 cut(s) 131, 823, 1082
SmoI CTYRAG 3 cut(s) 131, 823, 1082
Sse9I AATT 1 cut(s) 1220
SsiI CCGC 6 cut(s) 36, 165, 168, 290, 637, 1287
StyD4I CCNGG 4 cut(s) 208, 399, 727, 1275
StyI CCWWGG 3 cut(s) 216, 519, 969
TaaI ACNGT 5 cut(s) 245, 380, 535, 856, 1057
TaiI ACGT 2 cut(s) 147, 1047
TaqI TCGA 2 cut(s) 90, 339
TaqII GACCGA 1 cut(s) 266
TasI AATT 1 cut(s) 1220
TatI WGTACW 1 cut(s) 840
TauI GCSGC 2 cut(s) 39, 168
TfiI GAWTC 4 cut(s) 10, 341, 676, 884
Tru1I TTAA 3 cut(s) 645, 738, 765
Tru9I TTAA 3 cut(s) 645, 738, 765
TscAI CASTG 2 cut(s) 1162, 1201
TseFI GTSAC 4 cut(s) 311, 380, 706, 1061
TseI GCWGC 2 cut(s) 714, 905
Tsp45I GTSAC 4 cut(s) 311, 380, 706, 1061
TspDTI ATGAA 7 cut(s) 557, 787, 1007, 1090, 1259, 1320, 1326
TspGWI ACGGA 2 cut(s) 245, 941
TspRI CASTG 2 cut(s) 1162, 1201
Tth111I GACNNNGTC 1 cut(s) 224
Van91I CCANNNNNTGG 3 cut(s) 60, 415, 1076
VpaK11BI GGWCC 1 cut(s) 213
XapI RAATTY 1 cut(s) 1220
XcmI CCANNNNNNNNNTGG 1 cut(s) 416
XmiI GTMKAC 1 cut(s) 147
XmnI GAANNNNTTC 1 cut(s) 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.