Belongs to the peptidase C2 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55350 AT1G55350 AT1G55350 AT1G55350 AT1G55350 AT1G55350 |
| fragaria_vesca | FvH4_3g45741 |
| malus_domestica | MD03G1003600.v1.1 MD11G1003500.v1.1 |
| prunus_persica | Prupe.6G003300_v2.0.a1 Prupe.6G003300_v2.0.a1 |
| pyrus_communis | pycom03g00370 pycom11g00320 |
| rosa_chinensis | RchiOBHm_Chr5g0083811 |
| rosa_laevigata | RLG00000037053 |
| rosa_multiflora | Rmu_sc0001287.1_g000035 Rmu_sc0003602.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00000780 |
| rosa_rugosa | Rorug05G0486200 |
| rosa_samantha | Rh5AG539200 Rh5BG564500 Rh5CG586400 Rh5DG572900 |
| rosa_wichuraiana | Rw5G050130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1892, 5411 |
| Acc36I | ACCTGC | 5 cut(s) | 1103, 1892, 2027, 4978, 5411 |
| Acc65I | GGTACC | 1 cut(s) | 1631 |
| AccB1I | GGYRCC | 2 cut(s) | 1631, 3032 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 144, 3029 |
| AccI | GTMKAC | 1 cut(s) | 5403 |
| AccII | CGCG | 1 cut(s) | 3928 |
| AcoI | YGGCCR | 5 cut(s) | 146, 1830, 4060, 5048, 5824 |
| AcuI | CTGAAG | 4 cut(s) | 1089, 1158, 4653, 5723 |
| AcvI | CACGTG | 1 cut(s) | 22 |
| AdeI | CACNNNGTG | 1 cut(s) | 5957 |
| AflII | CTTAAG | 2 cut(s) | 3325, 3604 |
| AgeI | ACCGGT | 1 cut(s) | 2307 |
| AhlI | ACTAGT | 3 cut(s) | 1360, 4613, 5294 |
| AjiI | CACGTC | 1 cut(s) | 3719 |
| AjnI | CCWGG | 8 cut(s) | 137, 1310, 3970, 3992, 4805, 5654, 5744, 6193 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2001, 2033, 4435, 4467 |
| AleI | CACNNNNGTG | 1 cut(s) | 6173 |
| Alw21I | GWGCWC | 6 cut(s) | 374, 1883, 2486, 3436, 3964, 5449 |
| Alw26I | GTCTC | 4 cut(s) | 3565, 5326, 5490, 5861 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 758, 2042, 4056, 5981 |
| Ama87I | CYCGRG | 4 cut(s) | 2485, 2526, 3903, 6051 |
| AseI | ATTAAT | 1 cut(s) | 4848 |
| AsiGI | ACCGGT | 1 cut(s) | 2307 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3202, 4861 |
| Asp718I | GGTACC | 1 cut(s) | 1631 |
| AspA2I | CCTAGG | 1 cut(s) | 4823 |
| AspLEI | GCGC | 3 cut(s) | 3928, 5499, 5811 |
| AsuC2I | CCSGG | 2 cut(s) | 2836, 5274 |
| AsuII | TTCGAA | 1 cut(s) | 804 |
| AvaI | CYCGRG | 4 cut(s) | 2485, 2526, 3903, 6051 |
| AvaII | GGWCC | 3 cut(s) | 164, 2039, 2706 |
| AvrII | CCTAGG | 1 cut(s) | 4823 |
| BaeGI | GKGCMC | 1 cut(s) | 900 |
| BalI | TGGCCA | 4 cut(s) | 148, 1832, 4062, 5826 |
| BamHI | GGATCC | 4 cut(s) | 1390, 1429, 1992, 6148 |
| BanI | GGYRCC | 2 cut(s) | 1631, 3032 |
| BanII | GRGCYC | 1 cut(s) | 374 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3105, 3137 |
| BauI | CACGAG | 2 cut(s) | 2357, 6120 |
| BbrPI | CACGTG | 1 cut(s) | 22 |
| BbsI | GAAGAC | 3 cut(s) | 1348, 2083, 2549 |
| Bbv12I | GWGCWC | 6 cut(s) | 374, 1883, 2486, 3436, 3964, 5449 |
| BceAI | ACGGC | 3 cut(s) | 94, 5035, 5772 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1667, 1701 |
| BciT130I | CCWGG | 8 cut(s) | 139, 1312, 3972, 3994, 4807, 5656, 5746, 6195 |
| BclI | TGATCA | 4 cut(s) | 3412, 4242, 4921, 4942 |
| BcnI | CCSGG | 2 cut(s) | 2836, 5274 |
| BcoDI | GTCTC | 4 cut(s) | 3565, 5326, 5490, 5861 |
| BcuI | ACTAGT | 3 cut(s) | 1360, 4613, 5294 |
| BfmI | CTRYAG | 8 cut(s) | 121, 541, 2043, 2868, 3840, 3855, 3965, 4473 |
| BfrI | CTTAAG | 2 cut(s) | 3325, 3604 |
| BfuAI | ACCTGC | 5 cut(s) | 1103, 1892, 2027, 4978, 5411 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2840, 4152 |
| BglII | AGATCT | 2 cut(s) | 3164, 4702 |
| BlnI | CCTAGG | 1 cut(s) | 4823 |
| BlpI | GCTNAGC | 1 cut(s) | 1877 |
| BmcAI | AGTACT | 1 cut(s) | 1006 |
| Bme18I | GGWCC | 3 cut(s) | 164, 2039, 2706 |
| BmeT110I | CYCGRG | 4 cut(s) | 2485, 2526, 3903, 6051 |
| BmgBI | CACGTC | 1 cut(s) | 3719 |
| BpiI | GAAGAC | 3 cut(s) | 1348, 2083, 2549 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5431, 5463 |
| BpmI | CTGGAG | 4 cut(s) | 5160, 5351, 5433, 5547 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3537, 5448 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1877 |
| Bpu14I | TTCGAA | 1 cut(s) | 804 |
| BpuEI | CTTGAG | 6 cut(s) | 358, 1066, 1930, 3086, 3589, 5953 |
| BpuMI | CCSGG | 2 cut(s) | 2836, 5274 |
| BsaAI | YACGTR | 1 cut(s) | 22 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1479, 4686, 4701, 6153 |
| BsaI | GGTCTC | 2 cut(s) | 5326, 5490 |
| BsaWI | WCCGGW | 3 cut(s) | 226, 2307, 4007 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2297, 2327, 4276, 4306, 4770, 4800 |
| Bse118I | RCCGGY | 3 cut(s) | 842, 2307, 4196 |
| Bse3DI | GCAATG | 5 cut(s) | 1286, 2253, 3921, 4107, 4409 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1479, 4686, 4701, 6153 |
| BseBI | CCWGG | 8 cut(s) | 139, 1312, 3972, 3994, 4807, 5656, 5746, 6195 |
| BseJI | GATNNNNATC | 4 cut(s) | 1479, 4686, 4701, 6153 |
| BseMI | GCAATG | 5 cut(s) | 1286, 2253, 3921, 4107, 4409 |
| BseRI | GAGGAG | 4 cut(s) | 3350, 3740, 4917, 5455 |
| BseSI | GKGCMC | 1 cut(s) | 900 |
| BseX3I | CGGCCG | 1 cut(s) | 5048 |
| BseYI | CCCAGC | 3 cut(s) | 168, 2988, 5101 |
| BsgI | GTGCAG | 5 cut(s) | 2055, 2080, 2739, 3885, 5439 |
| Bsh1236I | CGCG | 1 cut(s) | 3928 |
| Bsh1285I | CGRYCG | 1 cut(s) | 5051 |
| BshNI | GGYRCC | 2 cut(s) | 1631, 3032 |
| BshTI | ACCGGT | 1 cut(s) | 2307 |
| BsiEI | CGRYCG | 1 cut(s) | 5051 |
| BsiHKAI | GWGCWC | 6 cut(s) | 374, 1883, 2486, 3436, 3964, 5449 |
| BsiHKCI | CYCGRG | 4 cut(s) | 2485, 2526, 3903, 6051 |
| BsiSI | CCGG | 7 cut(s) | 227, 843, 2308, 2835, 4008, 4197, 5273 |
| BslFI | GGGAC | 2 cut(s) | 3072, 6115 |
| BsmAI | GTCTC | 4 cut(s) | 3565, 5326, 5490, 5861 |
| BsmFI | GGGAC | 2 cut(s) | 3072, 6115 |
| BsmI | GAATGC | 2 cut(s) | 2460, 4863 |
| Bso31I | GGTCTC | 2 cut(s) | 5326, 5490 |
| BsoBI | CYCGRG | 4 cut(s) | 2485, 2526, 3903, 6051 |
| Bsp119I | TTCGAA | 1 cut(s) | 804 |
| Bsp1286I | GDGCHC | 7 cut(s) | 374, 900, 1883, 2486, 3436, 3964, 5449 |
| Bsp1407I | TGTACA | 2 cut(s) | 2226, 5550 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1877 |
| Bsp19I | CCATGG | 2 cut(s) | 2606, 5624 |
| BspFNI | CGCG | 1 cut(s) | 3928 |
| BspHI | TCATGA | 3 cut(s) | 2643, 3306, 6007 |
| BspMAI | CTGCAG | 4 cut(s) | 2047, 3844, 3859, 3969 |
| BspMI | ACCTGC | 5 cut(s) | 1103, 1892, 2027, 4978, 5411 |
| BspQI | GCTCTTC | 2 cut(s) | 324, 1415 |
| BspT104I | TTCGAA | 1 cut(s) | 804 |
| BspT107I | GGYRCC | 2 cut(s) | 1631, 3032 |
| BspTI | CTTAAG | 2 cut(s) | 3325, 3604 |
| BspTNI | GGTCTC | 2 cut(s) | 5326, 5490 |
| BsrDI | GCAATG | 5 cut(s) | 1286, 2253, 3921, 4107, 4409 |
| BsrFI | RCCGGY | 3 cut(s) | 842, 2307, 4196 |
| BsrGI | TGTACA | 2 cut(s) | 2226, 5550 |
| BssAI | RCCGGY | 3 cut(s) | 842, 2307, 4196 |
| BssSI | CACGAG | 2 cut(s) | 2357, 6120 |
| BssT1I | CCWWGG | 8 cut(s) | 516, 667, 1219, 2154, 2606, 4823, 5624, 6246 |
| Bst2BI | CACGAG | 2 cut(s) | 2357, 6120 |
| Bst2UI | CCWGG | 8 cut(s) | 139, 1312, 3972, 3994, 4807, 5656, 5746, 6195 |
| Bst6I | CTCTTC | 8 cut(s) | 324, 1328, 1415, 1818, 3415, 3453, 3690, 3717 |
| BstAFI | CTTAAG | 2 cut(s) | 3325, 3604 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2042, 2753, 2927, 3863 |
| BstAUI | TGTACA | 2 cut(s) | 2226, 5550 |
| BstBAI | YACGTR | 1 cut(s) | 22 |
| BstBI | TTCGAA | 1 cut(s) | 804 |
| BstDSI | CCRYGG | 3 cut(s) | 110, 2606, 5624 |
| BstEII | GGTNACC | 1 cut(s) | 1349 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1022, 4804 |
| BstFNI | CGCG | 1 cut(s) | 3928 |
| BstHHI | GCGC | 3 cut(s) | 3928, 5499, 5811 |
| BstMAI | GTCTC | 4 cut(s) | 3565, 5326, 5490, 5861 |
| BstMCI | CGRYCG | 1 cut(s) | 5051 |
| BstNI | CCWGG | 8 cut(s) | 139, 1312, 3972, 3994, 4807, 5656, 5746, 6195 |
| BstNSI | RCATGY | 5 cut(s) | 36, 532, 792, 1968, 4418 |
| BstPI | GGTNACC | 1 cut(s) | 1349 |
| BstSFI | CTRYAG | 8 cut(s) | 121, 541, 2043, 2868, 3840, 3855, 3965, 4473 |
| BstSLI | GKGCMC | 1 cut(s) | 900 |
| BstUI | CGCG | 1 cut(s) | 3928 |
| BstV2I | GAAGAC | 3 cut(s) | 1348, 2083, 2549 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 287 |
| BstZI | CGGCCG | 1 cut(s) | 5048 |
| BtgI | CCRYGG | 3 cut(s) | 110, 2606, 5624 |
| BtgZI | GCGATG | 1 cut(s) | 5652 |
| BtrI | CACGTC | 1 cut(s) | 3719 |
| BtsI | GCAGTG | 6 cut(s) | 898, 1210, 3864, 3962, 4119, 4652 |
| BveI | ACCTGC | 5 cut(s) | 1103, 1892, 2027, 4978, 5411 |
| CaiI | CAGNNNCTG | 4 cut(s) | 758, 2042, 4056, 5981 |
| CciI | TCATGA | 3 cut(s) | 2643, 3306, 6007 |
| CfoI | GCGC | 3 cut(s) | 3928, 5499, 5811 |
| Cfr10I | RCCGGY | 3 cut(s) | 842, 2307, 4196 |
| CseI | GACGC | 5 cut(s) | 5, 25, 734, 3786, 3917 |
| CspAI | ACCGGT | 1 cut(s) | 2307 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1506, 1541, 1671, 1706 |
| DraIII | CACNNNGTG | 1 cut(s) | 5957 |
| EaeI | YGGCCR | 5 cut(s) | 146, 1830, 4060, 5048, 5824 |
| EagI | CGGCCG | 1 cut(s) | 5048 |
| Eam1104I | CTCTTC | 8 cut(s) | 324, 1328, 1415, 1818, 3415, 3453, 3690, 3717 |
| EarI | CTCTTC | 8 cut(s) | 324, 1328, 1415, 1818, 3415, 3453, 3690, 3717 |
| EciI | GGCGGA | 1 cut(s) | 3377 |
| Ecl136II | GAGCTC | 1 cut(s) | 372 |
| EclXI | CGGCCG | 1 cut(s) | 5048 |
| Eco130I | CCWWGG | 8 cut(s) | 516, 667, 1219, 2154, 2606, 4823, 5624, 6246 |
| Eco147I | AGGCCT | 1 cut(s) | 5011 |
| Eco24I | GRGCYC | 1 cut(s) | 374 |
| Eco31I | GGTCTC | 2 cut(s) | 5326, 5490 |
| Eco32I | GATATC | 2 cut(s) | 154, 1501 |
| Eco47I | GGWCC | 3 cut(s) | 164, 2039, 2706 |
| Eco52I | CGGCCG | 1 cut(s) | 5048 |
| Eco53kI | GAGCTC | 1 cut(s) | 372 |
| Eco57I | CTGAAG | 4 cut(s) | 1089, 1158, 4653, 5723 |
| Eco72I | CACGTG | 1 cut(s) | 22 |
| Eco88I | CYCGRG | 4 cut(s) | 2485, 2526, 3903, 6051 |
| Eco91I | GGTNACC | 1 cut(s) | 1349 |
| EcoICRI | GAGCTC | 1 cut(s) | 372 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1022, 4804 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2039, 2706 |
| EcoO65I | GGTNACC | 1 cut(s) | 1349 |
| EcoRII | CCWGG | 8 cut(s) | 137, 1310, 3970, 3992, 4805, 5654, 5744, 6193 |
| EcoRV | GATATC | 2 cut(s) | 154, 1501 |
| EcoT14I | CCWWGG | 8 cut(s) | 516, 667, 1219, 2154, 2606, 4823, 5624, 6246 |
| EcoT22I | ATGCAT | 3 cut(s) | 2218, 4489, 4530 |
| EcoT38I | GRGCYC | 1 cut(s) | 374 |
| ErhI | CCWWGG | 8 cut(s) | 516, 667, 1219, 2154, 2606, 4823, 5624, 6246 |
| FaqI | GGGAC | 2 cut(s) | 3072, 6115 |
| FauI | CCCGC | 1 cut(s) | 6092 |
| FauNDI | CATATG | 1 cut(s) | 5341 |
| FbaI | TGATCA | 4 cut(s) | 3412, 4242, 4921, 4942 |
| FblI | GTMKAC | 1 cut(s) | 5403 |
| FriOI | GRGCYC | 1 cut(s) | 374 |
| GlaI | GCGC | 3 cut(s) | 3927, 5498, 5810 |
| GsaI | CCCAGC | 3 cut(s) | 172, 2992, 5105 |
| GsuI | CTGGAG | 4 cut(s) | 5160, 5351, 5433, 5547 |
| HapII | CCGG | 7 cut(s) | 227, 843, 2308, 2835, 4008, 4197, 5273 |
| HgaI | GACGC | 5 cut(s) | 5, 25, 734, 3786, 3917 |
| HhaI | GCGC | 3 cut(s) | 3928, 5499, 5811 |
| Hin6I | GCGC | 3 cut(s) | 3926, 5497, 5809 |
| HinP1I | GCGC | 3 cut(s) | 3926, 5497, 5809 |
| HincII | GTYRAC | 3 cut(s) | 1256, 3951, 5949 |
| HindII | GTYRAC | 3 cut(s) | 1256, 3951, 5949 |
| HindIII | AAGCTT | 3 cut(s) | 2197, 2519, 5603 |
| HpaI | GTTAAC | 1 cut(s) | 3951 |
| HpaII | CCGG | 7 cut(s) | 227, 843, 2308, 2835, 4008, 4197, 5273 |
| Hpy99I | CGWCG | 1 cut(s) | 3933 |
| HpyCH4IV | ACGT | 4 cut(s) | 21, 730, 3718, 5945 |
| HpySE526I | ACGT | 4 cut(s) | 21, 730, 3718, 5945 |
| HspAI | GCGC | 3 cut(s) | 3926, 5497, 5809 |
| KpnI | GGTACC | 1 cut(s) | 1635 |
| KroI | GCCGGC | 1 cut(s) | 842 |
| KroNI | GCCGGC | 1 cut(s) | 844 |
| Ksp22I | TGATCA | 4 cut(s) | 3412, 4242, 4921, 4942 |
| KspAI | GTTAAC | 1 cut(s) | 3951 |
| LguI | GCTCTTC | 2 cut(s) | 324, 1415 |
| LmnI | GCTCC | 8 cut(s) | 740, 785, 1599, 2573, 3214, 4435, 5363, 6211 |
| MaeII | ACGT | 4 cut(s) | 21, 730, 3718, 5945 |
| MfeI | CAATTG | 5 cut(s) | 510, 1683, 1695, 2283, 5489 |
| MhlI | GDGCHC | 7 cut(s) | 374, 900, 1883, 2486, 3436, 3964, 5449 |
| MlsI | TGGCCA | 4 cut(s) | 148, 1832, 4062, 5826 |
| MluNI | TGGCCA | 4 cut(s) | 148, 1832, 4062, 5826 |
| MlyI | GAGTC | 5 cut(s) | 1508, 3091, 3567, 4526, 5657 |
| MmeI | TCCRAC | 7 cut(s) | 107, 1457, 1870, 2441, 2746, 3226, 4147 |
| Mox20I | TGGCCA | 4 cut(s) | 148, 1832, 4062, 5826 |
| Mph1103I | ATGCAT | 3 cut(s) | 2218, 4489, 4530 |
| MroNI | GCCGGC | 1 cut(s) | 842 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3202, 4861 |
| MscI | TGGCCA | 4 cut(s) | 148, 1832, 4062, 5826 |
| MslI | CAYNNNNRTG | 3 cut(s) | 3260, 4112, 6173 |
| Msp20I | TGGCCA | 4 cut(s) | 148, 1832, 4062, 5826 |
| MspCI | CTTAAG | 2 cut(s) | 3325, 3604 |
| MspI | CCGG | 7 cut(s) | 227, 843, 2308, 2835, 4008, 4197, 5273 |
| MunI | CAATTG | 5 cut(s) | 510, 1683, 1695, 2283, 5489 |
| Mva1269I | GAATGC | 2 cut(s) | 2460, 4863 |
| MvaI | CCWGG | 8 cut(s) | 139, 1312, 3972, 3994, 4807, 5656, 5746, 6195 |
| MvnI | CGCG | 1 cut(s) | 3928 |
| NaeI | GCCGGC | 1 cut(s) | 844 |
| NciI | CCSGG | 2 cut(s) | 2836, 5274 |
| NcoI | CCATGG | 2 cut(s) | 2606, 5624 |
| NdeI | CATATG | 1 cut(s) | 5341 |
| NgoMIV | GCCGGC | 1 cut(s) | 842 |
| NmeAIII | GCCGAG | 3 cut(s) | 3934, 5026, 6086 |
| NmuCI | GTSAC | 5 cut(s) | 17, 195, 1349, 1487, 5597 |
| NsiI | ATGCAT | 3 cut(s) | 2218, 4489, 4530 |
| NspI | RCATGY | 5 cut(s) | 36, 532, 792, 1968, 4418 |
| NspV | TTCGAA | 1 cut(s) | 804 |
| OliI | CACNNNNGTG | 1 cut(s) | 6173 |
| PaeI | GCATGC | 2 cut(s) | 36, 1968 |
| PaeR7I | CTCGAG | 2 cut(s) | 3903, 6051 |
| PagI | TCATGA | 3 cut(s) | 2643, 3306, 6007 |
| PaqCI | CACCTGC | 2 cut(s) | 1892, 5411 |
| PceI | AGGCCT | 1 cut(s) | 5011 |
| PciSI | GCTCTTC | 2 cut(s) | 324, 1415 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 6058, 6176 |
| PctI | GAATGC | 2 cut(s) | 2460, 4863 |
| PdiI | GCCGGC | 1 cut(s) | 844 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3202, 4861 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 144, 3029 |
| PinAI | ACCGGT | 1 cut(s) | 2307 |
| PleI | GAGTC | 5 cut(s) | 1508, 3091, 3567, 4525, 5657 |
| PmaCI | CACGTG | 1 cut(s) | 22 |
| PmlI | CACGTG | 1 cut(s) | 22 |
| PpsI | GAGTC | 5 cut(s) | 1508, 3091, 3567, 4525, 5657 |
| Ppu21I | YACGTR | 1 cut(s) | 22 |
| PpuMI | RGGWCCY | 2 cut(s) | 2039, 2706 |
| PshBI | ATTAAT | 1 cut(s) | 4848 |
| Psp124BI | GAGCTC | 1 cut(s) | 374 |
| Psp5II | RGGWCCY | 2 cut(s) | 2039, 2706 |
| Psp6I | CCWGG | 8 cut(s) | 137, 1310, 3970, 3992, 4805, 5654, 5744, 6193 |
| PspCI | CACGTG | 1 cut(s) | 22 |
| PspEI | GGTNACC | 1 cut(s) | 1349 |
| PspFI | CCCAGC | 3 cut(s) | 168, 2988, 5101 |
| PspGI | CCWGG | 8 cut(s) | 137, 1310, 3970, 3992, 4805, 5654, 5744, 6193 |
| PspPPI | RGGWCCY | 2 cut(s) | 2039, 2706 |
| PspXI | VCTCGAGB | 1 cut(s) | 6051 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1138, 1170 |
| PstI | CTGCAG | 4 cut(s) | 2047, 3844, 3859, 3969 |
| PstNI | CAGNNNCTG | 4 cut(s) | 758, 2042, 4056, 5981 |
| PvuII | CAGCTG | 9 cut(s) | 172, 755, 2351, 2585, 3233, 3845, 3854, 4595, 4607 |
| RseI | CAYNNNNRTG | 3 cut(s) | 3260, 4112, 6173 |
| SacI | GAGCTC | 1 cut(s) | 374 |
| SapI | GCTCTTC | 2 cut(s) | 324, 1415 |
| SbfI | CCTGCAGG | 1 cut(s) | 2047 |
| ScaI | AGTACT | 1 cut(s) | 1006 |
| SchI | GAGTC | 5 cut(s) | 1508, 3091, 3567, 4526, 5657 |
| SdaI | CCTGCAGG | 1 cut(s) | 2047 |
| SduI | GDGCHC | 7 cut(s) | 374, 900, 1883, 2486, 3436, 3964, 5449 |
| SfcI | CTRYAG | 8 cut(s) | 121, 541, 2043, 2868, 3840, 3855, 3965, 4473 |
| Sfr274I | CTCGAG | 2 cut(s) | 3903, 6051 |
| SfuI | TTCGAA | 1 cut(s) | 804 |
| SinI | GGWCC | 3 cut(s) | 164, 2039, 2706 |
| SlaI | CTCGAG | 2 cut(s) | 3903, 6051 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 3260, 4112, 6173 |
| SpeI | ACTAGT | 3 cut(s) | 1360, 4613, 5294 |
| SphI | GCATGC | 2 cut(s) | 36, 1968 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2047 |
| SseBI | AGGCCT | 1 cut(s) | 5011 |
| SspI | AATATT | 4 cut(s) | 270, 3447, 4188, 4742 |
| SstI | GAGCTC | 1 cut(s) | 374 |
| StuI | AGGCCT | 1 cut(s) | 5011 |
| StyI | CCWWGG | 8 cut(s) | 516, 667, 1219, 2154, 2606, 4823, 5624, 6246 |
| TaiI | ACGT | 4 cut(s) | 24, 733, 3721, 5948 |
| TaqII | GACCGA | 1 cut(s) | 2543 |
| TatI | WGTACW | 9 cut(s) | 235, 693, 1004, 2226, 2275, 2650, 3121, 3550, 5550 |
| TauI | GCSGC | 2 cut(s) | 3038, 6060 |
| TseFI | GTSAC | 5 cut(s) | 17, 195, 1349, 1487, 5597 |
| Tsp45I | GTSAC | 5 cut(s) | 17, 195, 1349, 1487, 5597 |
| TspGWI | ACGGA | 5 cut(s) | 49, 177, 1691, 1985, 5156 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 144, 3029 |
| Vha464I | CTTAAG | 2 cut(s) | 3325, 3604 |
| VpaK11BI | GGWCC | 3 cut(s) | 164, 2039, 2706 |
| VspI | ATTAAT | 1 cut(s) | 4848 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1022, 4804 |
| XbaI | TCTAGA | 3 cut(s) | 2399, 4024, 4664 |
| XceI | RCATGY | 5 cut(s) | 36, 532, 792, 1968, 4418 |
| XcmI | CCANNNNNNNNNTGG | 5 cut(s) | 1644, 2260, 2289, 4130, 4595 |
| XhoI | CTCGAG | 2 cut(s) | 3903, 6051 |
| XmaJI | CCTAGG | 1 cut(s) | 4823 |
| XmiI | GTMKAC | 1 cut(s) | 5403 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3202, 4861 |
| ZrmI | AGTACT | 1 cut(s) | 1006 |
| Zsp2I | ATGCAT | 3 cut(s) | 2218, 4489, 4530 |