Belongs to the GRAS family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0337161 RchiOBHm_Chr1g0350891 RchiOBHm_Chr3g0469761 RchiOBHm_Chr5g0032021 |
| rosa_laevigata | RLG00000003109 RLG00000018290 RLG00000021581 RLG00000036216 |
| rosa_multiflora | Rmu_sc0003636.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00115230 Rroxscaffold_2G00141270 Rroxscaffold_3G00238180 Rroxscaffold_4G00327250 |
| rosa_rugosa | Rorug04G0088000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 782 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1493 |
| AccII | CGCG | 1 cut(s) | 716 |
| AciI | CCGC | 6 cut(s) | 55, 150, 167, 217, 246, 706 |
| AclWI | GGATC | 3 cut(s) | 211, 524, 1238 |
| AcoI | YGGCCR | 3 cut(s) | 26, 940, 1194 |
| AcsI | RAATTY | 2 cut(s) | 1336, 1382 |
| AcuI | CTGAAG | 2 cut(s) | 290, 573 |
| AcyI | GRCGYC | 3 cut(s) | 46, 58, 779 |
| AdeI | CACNNNGTG | 1 cut(s) | 1441 |
| AfaI | GTAC | 3 cut(s) | 639, 1130, 1409 |
| AfeI | AGCGCT | 1 cut(s) | 679 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 41, 169, 379, 1493, 1547 |
| AflIII | ACRYGT | 1 cut(s) | 714 |
| AgsI | TTSAA | 2 cut(s) | 957, 967 |
| AjnI | CCWGG | 4 cut(s) | 287, 364, 1158, 1437 |
| AleI | CACNNNNGTG | 1 cut(s) | 769 |
| Alw26I | GTCTC | 4 cut(s) | 53, 164, 759, 1546 |
| AlwI | GGATC | 3 cut(s) | 211, 524, 1238 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1079 |
| Aor51HI | AGCGCT | 1 cut(s) | 679 |
| AoxI | GGCC | 8 cut(s) | 26, 309, 331, 791, 800, 844, 940, 1194 |
| ApeKI | GCWGC | 7 cut(s) | 253, 684, 811, 1180, 1205, 1424, 1557 |
| ApoI | RAATTY | 2 cut(s) | 1336, 1382 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 94, 126, 530, 562 |
| AspLEI | GCGC | 3 cut(s) | 241, 680, 711 |
| AspS9I | GGNCC | 4 cut(s) | 310, 361, 370, 800 |
| AsuHPI | GGTGA | 5 cut(s) | 85, 774, 1245, 1427, 1453 |
| AvaII | GGWCC | 2 cut(s) | 361, 370 |
| BalI | TGGCCA | 2 cut(s) | 28, 942 |
| BanII | GRGCYC | 1 cut(s) | 1073 |
| BbsI | GAAGAC | 2 cut(s) | 239, 1161 |
| BbvI | GCAGC | 7 cut(s) | 240, 671, 823, 1167, 1192, 1436, 1569 |
| BccI | CCATC | 5 cut(s) | 255, 321, 503, 1032, 1523 |
| BceAI | ACGGC | 2 cut(s) | 226, 1181 |
| BciT130I | CCWGG | 4 cut(s) | 289, 366, 1160, 1439 |
| BcoDI | GTCTC | 4 cut(s) | 53, 164, 759, 1546 |
| BfaI | CTAG | 4 cut(s) | 270, 459, 600, 609 |
| BfmI | CTRYAG | 2 cut(s) | 1181, 1422 |
| BfoI | RGCGCY | 3 cut(s) | 242, 681, 712 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 799, 808 |
| BglII | AGATCT | 1 cut(s) | 272 |
| Bme1390I | CCNGG | 4 cut(s) | 289, 366, 1160, 1439 |
| Bme18I | GGWCC | 2 cut(s) | 361, 370 |
| BmgT120I | GGNCC | 4 cut(s) | 310, 361, 370, 800 |
| BmiI | GGNNCC | 3 cut(s) | 362, 363, 371 |
| BmrFI | CCNGG | 4 cut(s) | 289, 366, 1160, 1439 |
| BmsI | GCATC | 1 cut(s) | 1466 |
| BpiI | GAAGAC | 2 cut(s) | 239, 1161 |
| BpmI | CTGGAG | 3 cut(s) | 597, 1169, 1181 |
| Bpu10I | CCTNAGC | 1 cut(s) | 36 |
| BpuEI | CTTGAG | 3 cut(s) | 513, 587, 1581 |
| BsaHI | GRCGYC | 3 cut(s) | 46, 58, 779 |
| BsaJI | CCNNGG | 4 cut(s) | 344, 364, 365, 770 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 41, 169, 379, 1493, 1547 |
| Bse1I | ACTGG | 3 cut(s) | 180, 700, 919 |
| BseBI | CCWGG | 4 cut(s) | 289, 366, 1160, 1439 |
| BseDI | CCNNGG | 4 cut(s) | 344, 364, 365, 770 |
| BseGI | GGATG | 5 cut(s) | 457, 730, 1024, 1457, 1534 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 41, 169, 379, 1493, 1547 |
| BseMII | CTCAG | 6 cut(s) | 120, 200, 1013, 1071, 1581, 1623 |
| BseNI | ACTGG | 3 cut(s) | 180, 700, 919 |
| BseRI | GAGGAG | 1 cut(s) | 584 |
| BseXI | GCAGC | 7 cut(s) | 240, 671, 823, 1167, 1192, 1436, 1569 |
| BseYI | CCCAGC | 4 cut(s) | 13, 169, 447, 1072 |
| BsgI | GTGCAG | 1 cut(s) | 670 |
| Bsh1236I | CGCG | 1 cut(s) | 716 |
| Bsh1285I | CGRYCG | 1 cut(s) | 221 |
| BshFI | GGCC | 8 cut(s) | 28, 311, 333, 793, 802, 846, 942, 1196 |
| BsiEI | CGRYCG | 1 cut(s) | 221 |
| BslFI | GGGAC | 5 cut(s) | 129, 186, 374, 383, 942 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 41, 169, 379, 1493, 1547 |
| BsmAI | GTCTC | 4 cut(s) | 53, 164, 759, 1546 |
| BsmBI | CGTCTC | 3 cut(s) | 53, 759, 1546 |
| BsmFI | GGGAC | 5 cut(s) | 129, 186, 374, 383, 942 |
| BsnI | GGCC | 8 cut(s) | 28, 311, 333, 793, 802, 846, 942, 1196 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1073 |
| Bsp1407I | TGTACA | 1 cut(s) | 637 |
| Bsp143I | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| Bsp19I | CCATGG | 1 cut(s) | 344 |
| BspACI | CCGC | 6 cut(s) | 55, 150, 167, 217, 246, 706 |
| BspANI | GGCC | 8 cut(s) | 28, 311, 333, 793, 802, 846, 942, 1196 |
| BspCNI | CTCAG | 6 cut(s) | 119, 201, 1012, 1072, 1582, 1624 |
| BspFNI | CGCG | 1 cut(s) | 716 |
| BspLI | GGNNCC | 3 cut(s) | 362, 363, 371 |
| BspMAI | CTGCAG | 2 cut(s) | 1185, 1426 |
| BspPI | GGATC | 3 cut(s) | 211, 524, 1238 |
| BsrGI | TGTACA | 1 cut(s) | 637 |
| BsrI | ACTGG | 3 cut(s) | 180, 700, 919 |
| BssECI | CCNNGG | 4 cut(s) | 344, 364, 365, 770 |
| BssMI | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| BssNI | GRCGYC | 3 cut(s) | 46, 58, 779 |
| BssT1I | CCWWGG | 1 cut(s) | 344 |
| Bst2UI | CCWGG | 4 cut(s) | 289, 366, 1160, 1439 |
| Bst4CI | ACNGT | 2 cut(s) | 398, 1093 |
| Bst6I | CTCTTC | 1 cut(s) | 1275 |
| BstACI | GRCGYC | 3 cut(s) | 46, 58, 779 |
| BstAUI | TGTACA | 1 cut(s) | 637 |
| BstC8I | GCNNGC | 5 cut(s) | 335, 682, 809, 1422, 1562 |
| BstDEI | CTNAG | 8 cut(s) | 36, 106, 209, 999, 1036, 1080, 1590, 1632 |
| BstDSI | CCRYGG | 2 cut(s) | 344, 770 |
| BstF5I | GGATG | 5 cut(s) | 457, 730, 1024, 1457, 1534 |
| BstFNI | CGCG | 1 cut(s) | 716 |
| BstH2I | RGCGCY | 3 cut(s) | 242, 681, 712 |
| BstHHI | GCGC | 3 cut(s) | 241, 680, 711 |
| BstKTI | GATC | 6 cut(s) | 99, 206, 230, 275, 519, 1246 |
| BstMAI | GTCTC | 4 cut(s) | 53, 164, 759, 1546 |
| BstMBI | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| BstMCI | CGRYCG | 1 cut(s) | 221 |
| BstNI | CCWGG | 4 cut(s) | 289, 366, 1160, 1439 |
| BstNSI | RCATGY | 1 cut(s) | 491 |
| BstSCI | CCNGG | 4 cut(s) | 287, 364, 1158, 1437 |
| BstSFI | CTRYAG | 2 cut(s) | 1181, 1422 |
| BstUI | CGCG | 1 cut(s) | 716 |
| BstV1I | GCAGC | 7 cut(s) | 240, 671, 823, 1167, 1192, 1436, 1569 |
| BstV2I | GAAGAC | 2 cut(s) | 239, 1161 |
| BstX2I | RGATCY | 3 cut(s) | 203, 272, 516 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 351, 771 |
| BstYI | RGATCY | 3 cut(s) | 203, 272, 516 |
| BsuRI | GGCC | 8 cut(s) | 28, 311, 333, 793, 802, 846, 942, 1196 |
| BtgI | CCRYGG | 2 cut(s) | 344, 770 |
| BtsCI | GGATG | 5 cut(s) | 457, 730, 1024, 1457, 1534 |
| Cac8I | GCNNGC | 5 cut(s) | 335, 682, 809, 1422, 1562 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1079 |
| CfoI | GCGC | 3 cut(s) | 241, 680, 711 |
| Cfr13I | GGNCC | 4 cut(s) | 310, 361, 370, 800 |
| CseI | GACGC | 5 cut(s) | 35, 47, 705, 741, 1563 |
| CsiI | ACCWGGT | 1 cut(s) | 1437 |
| Csp6I | GTAC | 3 cut(s) | 638, 1129, 1408 |
| CviAII | CATG | 4 cut(s) | 345, 488, 944, 1177 |
| CviQI | GTAC | 3 cut(s) | 638, 1129, 1408 |
| DdeI | CTNAG | 8 cut(s) | 36, 106, 209, 999, 1036, 1080, 1590, 1632 |
| DpnI | GATC | 6 cut(s) | 98, 205, 229, 274, 518, 1245 |
| DpnII | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| DraIII | CACNNNGTG | 1 cut(s) | 1441 |
| EaeI | YGGCCR | 3 cut(s) | 26, 940, 1194 |
| Eam1104I | CTCTTC | 1 cut(s) | 1275 |
| EarI | CTCTTC | 1 cut(s) | 1275 |
| Eco130I | CCWWGG | 1 cut(s) | 344 |
| Eco147I | AGGCCT | 2 cut(s) | 793, 846 |
| Eco24I | GRGCYC | 1 cut(s) | 1073 |
| Eco32I | GATATC | 1 cut(s) | 1390 |
| Eco47I | GGWCC | 2 cut(s) | 361, 370 |
| Eco47III | AGCGCT | 1 cut(s) | 679 |
| Eco57I | CTGAAG | 2 cut(s) | 290, 573 |
| EcoO109I | RGGNCCY | 2 cut(s) | 361, 370 |
| EcoRI | GAATTC | 1 cut(s) | 1382 |
| EcoRII | CCWGG | 4 cut(s) | 287, 364, 1158, 1437 |
| EcoRV | GATATC | 1 cut(s) | 1390 |
| EcoT14I | CCWWGG | 1 cut(s) | 344 |
| EcoT38I | GRGCYC | 1 cut(s) | 1073 |
| ErhI | CCWWGG | 1 cut(s) | 344 |
| Esp3I | CGTCTC | 3 cut(s) | 53, 759, 1546 |
| FaeI | CATG | 4 cut(s) | 348, 491, 947, 1180 |
| FaqI | GGGAC | 5 cut(s) | 129, 186, 374, 383, 942 |
| FatI | CATG | 4 cut(s) | 344, 487, 943, 1176 |
| FauI | CCCGC | 1 cut(s) | 239 |
| FokI | GGATG | 5 cut(s) | 464, 717, 1011, 1444, 1541 |
| FriOI | GRGCYC | 1 cut(s) | 1073 |
| FspBI | CTAG | 4 cut(s) | 270, 459, 600, 609 |
| GlaI | GCGC | 3 cut(s) | 240, 679, 710 |
| GsaI | CCCAGC | 4 cut(s) | 17, 173, 451, 1076 |
| GsuI | CTGGAG | 3 cut(s) | 597, 1169, 1181 |
| HaeII | RGCGCY | 3 cut(s) | 242, 681, 712 |
| HaeIII | GGCC | 8 cut(s) | 28, 311, 333, 793, 802, 846, 942, 1196 |
| HgaI | GACGC | 5 cut(s) | 35, 47, 705, 741, 1563 |
| HhaI | GCGC | 3 cut(s) | 241, 680, 711 |
| Hin1I | GRCGYC | 3 cut(s) | 46, 58, 779 |
| Hin1II | CATG | 4 cut(s) | 348, 491, 947, 1180 |
| Hin6I | GCGC | 3 cut(s) | 239, 678, 709 |
| HinP1I | GCGC | 3 cut(s) | 239, 678, 709 |
| HincII | GTYRAC | 1 cut(s) | 777 |
| HindII | GTYRAC | 1 cut(s) | 777 |
| HinfI | GANTC | 8 cut(s) | 455, 503, 1004, 1277, 1307, 1327, 1450, 1586 |
| HphI | GGTGA | 5 cut(s) | 85, 774, 1245, 1427, 1453 |
| Hpy166II | GTNNAC | 1 cut(s) | 777 |
| Hpy8I | GTNNAC | 1 cut(s) | 777 |
| HpyAV | CCTTC | 8 cut(s) | 175, 597, 750, 768, 804, 1379, 1495, 1541 |
| HpyCH4III | ACNGT | 2 cut(s) | 398, 1093 |
| HpyCH4IV | ACGT | 2 cut(s) | 779, 1429 |
| HpyCH4V | TGCA | 5 cut(s) | 687, 980, 990, 1183, 1424 |
| HpyF3I | CTNAG | 8 cut(s) | 36, 106, 209, 999, 1036, 1080, 1590, 1632 |
| HpySE526I | ACGT | 2 cut(s) | 779, 1429 |
| Hsp92I | GRCGYC | 3 cut(s) | 46, 58, 779 |
| Hsp92II | CATG | 4 cut(s) | 348, 491, 947, 1180 |
| HspAI | GCGC | 3 cut(s) | 239, 678, 709 |
| KflI | GGGWCCC | 1 cut(s) | 361 |
| Kzo9I | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| Lsp1109I | GCAGC | 7 cut(s) | 240, 671, 823, 1167, 1192, 1436, 1569 |
| LweI | GCATC | 1 cut(s) | 1466 |
| MabI | ACCWGGT | 1 cut(s) | 1437 |
| MaeI | CTAG | 4 cut(s) | 270, 459, 600, 609 |
| MaeII | ACGT | 2 cut(s) | 779, 1429 |
| MaeIII | GTNAC | 5 cut(s) | 536, 780, 994, 1103, 1617 |
| MalI | GATC | 6 cut(s) | 98, 205, 229, 274, 518, 1245 |
| MboI | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| MboII | GAAGA | 7 cut(s) | 237, 244, 296, 1097, 1136, 1166, 1262 |
| MfeI | CAATTG | 1 cut(s) | 647 |
| MflI | RGATCY | 3 cut(s) | 203, 272, 516 |
| MhlI | GDGCHC | 1 cut(s) | 1073 |
| MlsI | TGGCCA | 2 cut(s) | 28, 942 |
| MluCI | AATT | 5 cut(s) | 559, 647, 1336, 1382, 1412 |
| MluI | ACGCGT | 1 cut(s) | 714 |
| MluNI | TGGCCA | 2 cut(s) | 28, 942 |
| MlyI | GAGTC | 3 cut(s) | 464, 1336, 1580 |
| MmeI | TCCRAC | 3 cut(s) | 494, 928, 1134 |
| Mox20I | TGGCCA | 2 cut(s) | 28, 942 |
| MscI | TGGCCA | 2 cut(s) | 28, 942 |
| MseI | TTAA | 1 cut(s) | 1233 |
| MslI | CAYNNNNRTG | 3 cut(s) | 137, 349, 769 |
| Msp20I | TGGCCA | 2 cut(s) | 28, 942 |
| MspA1I | CMGCKG | 2 cut(s) | 169, 814 |
| MspR9I | CCNGG | 4 cut(s) | 289, 366, 1160, 1439 |
| MunI | CAATTG | 1 cut(s) | 647 |
| MvaI | CCWGG | 4 cut(s) | 289, 366, 1160, 1439 |
| MvnI | CGCG | 1 cut(s) | 716 |
| NcoI | CCATGG | 1 cut(s) | 344 |
| NdeII | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| NlaIII | CATG | 4 cut(s) | 348, 491, 947, 1180 |
| NlaIV | GGNNCC | 3 cut(s) | 362, 363, 371 |
| NmeAIII | GCCGAG | 1 cut(s) | 828 |
| NmuCI | GTSAC | 3 cut(s) | 536, 780, 994 |
| NspI | RCATGY | 1 cut(s) | 491 |
| OliI | CACNNNNGTG | 1 cut(s) | 769 |
| PasI | CCCWGGG | 1 cut(s) | 365 |
| PceI | AGGCCT | 2 cut(s) | 793, 846 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 37, 227 |
| PfeI | GAWTC | 5 cut(s) | 503, 1004, 1277, 1307, 1450 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1493 |
| PleI | GAGTC | 3 cut(s) | 463, 1335, 1580 |
| PpsI | GAGTC | 3 cut(s) | 463, 1335, 1580 |
| PpuMI | RGGWCCY | 2 cut(s) | 361, 370 |
| Psp5II | RGGWCCY | 2 cut(s) | 361, 370 |
| Psp6I | CCWGG | 4 cut(s) | 287, 364, 1158, 1437 |
| PspFI | CCCAGC | 4 cut(s) | 13, 169, 447, 1072 |
| PspGI | CCWGG | 4 cut(s) | 287, 364, 1158, 1437 |
| PspN4I | GGNNCC | 3 cut(s) | 362, 363, 371 |
| PspPI | GGNCC | 4 cut(s) | 310, 361, 370, 800 |
| PspPPI | RGGWCCY | 2 cut(s) | 361, 370 |
| PstI | CTGCAG | 2 cut(s) | 1185, 1426 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1079 |
| PsuI | RGATCY | 3 cut(s) | 203, 272, 516 |
| PvuII | CAGCTG | 1 cut(s) | 814 |
| RsaI | GTAC | 3 cut(s) | 639, 1130, 1409 |
| RsaNI | GTAC | 3 cut(s) | 638, 1129, 1408 |
| RseI | CAYNNNNRTG | 3 cut(s) | 137, 349, 769 |
| SaqAI | TTAA | 1 cut(s) | 1233 |
| Sau3AI | GATC | 6 cut(s) | 96, 203, 227, 272, 516, 1243 |
| Sau96I | GGNCC | 4 cut(s) | 310, 361, 370, 800 |
| SchI | GAGTC | 3 cut(s) | 464, 1336, 1580 |
| ScrFI | CCNGG | 4 cut(s) | 289, 366, 1160, 1439 |
| SduI | GDGCHC | 1 cut(s) | 1073 |
| SexAI | ACCWGGT | 1 cut(s) | 1437 |
| SfaNI | GCATC | 1 cut(s) | 1466 |
| SfcI | CTRYAG | 2 cut(s) | 1181, 1422 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 799 |
| SinI | GGWCC | 2 cut(s) | 361, 370 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 137, 349, 769 |
| SmlI | CTYRAG | 3 cut(s) | 528, 566, 1596 |
| SmoI | CTYRAG | 3 cut(s) | 528, 566, 1596 |
| Sse9I | AATT | 5 cut(s) | 559, 647, 1336, 1382, 1412 |
| SseBI | AGGCCT | 2 cut(s) | 793, 846 |
| SsiI | CCGC | 6 cut(s) | 55, 150, 167, 217, 246, 706 |
| SspMI | CTAG | 4 cut(s) | 270, 459, 600, 609 |
| StuI | AGGCCT | 2 cut(s) | 793, 846 |
| StyD4I | CCNGG | 4 cut(s) | 287, 364, 1158, 1437 |
| StyI | CCWWGG | 1 cut(s) | 344 |
| TaaI | ACNGT | 2 cut(s) | 398, 1093 |
| TaiI | ACGT | 2 cut(s) | 782, 1432 |
| TaqI | TCGA | 3 cut(s) | 95, 230, 1386 |
| TaqII | GACCGA | 1 cut(s) | 857 |
| TasI | AATT | 5 cut(s) | 559, 647, 1336, 1382, 1412 |
| TatI | WGTACW | 2 cut(s) | 637, 1128 |
| TauI | GCSGC | 3 cut(s) | 58, 153, 709 |
| TfiI | GAWTC | 5 cut(s) | 503, 1004, 1277, 1307, 1450 |
| Tru1I | TTAA | 1 cut(s) | 1233 |
| Tru9I | TTAA | 1 cut(s) | 1233 |
| TseFI | GTSAC | 3 cut(s) | 536, 780, 994 |
| TseI | GCWGC | 7 cut(s) | 253, 684, 811, 1180, 1205, 1424, 1557 |
| Tsp45I | GTSAC | 3 cut(s) | 536, 780, 994 |
| TspDTI | ATGAA | 4 cut(s) | 397, 647, 1165, 1514 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1493 |
| VpaK11BI | GGWCC | 2 cut(s) | 361, 370 |
| XapI | RAATTY | 2 cut(s) | 1336, 1382 |
| XbaI | TCTAGA | 1 cut(s) | 269 |
| XceI | RCATGY | 1 cut(s) | 491 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 911 |
| XspI | CTAG | 4 cut(s) | 270, 459, 600, 609 |
| ZraI | GACGTC | 1 cut(s) | 780 |