Rorug04G0088000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0016970
Physical Location & Seq
Forward (+)
13674540 .. 13677578
3039 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0088000.1

Sequence Viewer

Length: 2235 bp
ATGGGAAGTACTAAAATGGTCCCGAGTCCAGCTTTTCCTGAACTTCTCAACCATGAGAACTATGAACACTGGAGTTTGCGAATCGAAACCTACTTGTTGGCTGAAGACCTGTGGGATATTGTGAAACCCAAAGATACTGCAATTCCTCAACCAGAAGGTGGTGAAGAATATAAGAATTGGACAAGGAAGAATGCAAATGCTTTGCATGTAATTCAAAATTCTTGCGGGAGTGATATGTTCTCTTTTATCAGTAAAATTCGCACAGCAAAAGATGCCTGGGACACTCTGGAAAAGGAGTGCAAGGCAGCAATGTCCGCCAAAGTTTTAAAACAGAAAGCTGAGGAGGATGCTCTGGAATTCGAGCGGTACAAACCCTTTGCCAACTATGTGATTGATGGTGATTGGGAGAAAACAAAGGAGTTTCTTATAGAACTACCCGATGCAGTAACTGTAAGAGATCCAAGGCACGGATATGGCGACACAGCTCTTCATTTAGCAGCCAGGGGTGGGCATGCGCATATCGTGAAAGAGTTGTTGTTGGTGATGAGAAAAGAAGATGTGCAGATAAAAAACGCTAATGGTTCCACAGCTATTCATGCGGCAGTGAAGAAGGGACATGTGGACATTGTGAAACAGTTGGTGCCTTTGATCGGAGAAGTAACAGACCATCATGGTTACACAGCTCTTCACTTTGCAGTTCAGATGCGGGATGCACATACTGTGAAAGAGTTGGTGAAATTAATGAGACGAGAAGATTTGGAAATAAAAAATGAGGATGGTTACACAGCTCTTCACCTAGCAGTCAAGAAGAAAGATGTGCCTATTGTTAAAGAGTTGCTGCCATATGATGACTTCGACCGCTATATTTTGCTCACCAATTCTGTGACTGAAGGTGATTGGAGTACTGCAAAGGAGTGCCTTAGAGAACTAGATCCCCATGACGCAGTAAGAGCAAGAGATCCAAGAGACGGTCATGGAAACACGGCTCTTCATATAGCAGCTAGGCAAGGGCATGTGGATGTTGTGAAAGAGTTGGTGTTGTTGATGACAAAAGAGGATTTGGAATTGAAAAGCACTGATAGTTTAGAAGATGAAAATGTTGGCCTCAGTGAAGGAATGGTCATTGAAATGGCTAAGCACATGGTTACACATAACGAGAAAATTCTCAGCACTAATTTGGAACTAAGAAACACTATTGGTGATACGGCTCTTCATGAAGCAGTCAAGAAGGGACATGTGCATATTGTGAAAGAATTGGTGCCTTTTATGAGAGAAAAAGGTTTTGAGGTTAGAAATAATGAAGGTGCCACAGCTCTTTACCAAGCAGTACTGACGGAGAATGTTGATCTTGTGAAAATGTTGGTGTCGTCAATGAGACAAGTAGGTTTTGAATTGAGAAATAAGGAGGGTCACACAGCTCTTCACCAAGCAGTAATGAAGGGAAATGTGGATATTGTGAAAGAGTTAGTGTCTTCCATGAGACAAGAAGGTTTTGAAGTAAAAAGTAGTAAAGGTTACACAGCTCTCCACCAAGCAGTATTGAAGGAAAATGTGGATATTGTCAAAAAGTTGGTGTCGTTGATGAGACAAGAAGGTTTGCGAGTGAAAGATGCTATTGGTTCCACAGCTCTTCACCTTGCAGCCACGAATGGGAATTTAGATGTTGTGAAAGAGTTGGTGTCGTTGATGAGACAGGAAGGATTTGAAGTAAAAGACACTAGTGGTTCCACTGCTCTTCACAAAGCGGTCATGAAAGGGCATATGCATATCGCTAAACAGTTAGTGTCGTTGATGAGACCAGAAGCTTTGGAAAAAAAAGATGGTAGAGGTTATACAGCTCTAGGTCGTGTTGTAGAGGTACTTCATGACGGAGACGTGAGAGAAATGGCTAAATGCATGGCTGAGAAGAACAAGAAAATATTTGGGATTCGCATGCCTCGCCAAGATTCCATTCCAGCTATCTGGGCATGTATGTGGAGCAAAATGGAATTGGGTCGCTATCTCTATTCTCTCACTCCAACTGAAGCTATGAATGGCTACAACGGTGCTTACCTTATTAGTATTTGTATTAAGCGTATGAAAGGCCTTGATATTGCATGGGACTTACTACAGCGTTATCCAAGATTAGCTGTCCATGAGGTACATGAACCTATGTTTGTATTGGCTCGTATGCATTATGCATTCTTGAGTGGAACGCGACTTCCATTCTGGCAAAAGTGGATTTACAACCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

744

Amino Acids

84.24

Weight (kDa)

6.83

Isoelectric Point (pI)

29.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 16 - 42 9.1e-08 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 29 - 101 1.5e-09 gag-polypeptide of LTR copia-type
Ank_2 PF12796 149 - 214 2.5e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 157 - 199 8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 221 - 282 2.2e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 241 - 346 4e-11 Ankyrin repeats (3 copies)
Ank PF00023 325 - 346 4.1e-06 Ankyrin repeat
Ank_2 PF12796 378 - 457 4.1e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 404 - 455 2.4e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 464 - 526 8.4e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 474 - 525 1.4e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 503 - 547 1.2e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 533 - 596 6.5e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 544 - 637 4.9e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 544 - 592 1e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 516
AccB1I GGYRCC 3 cut(s) 640, 1258, 1304
AccB7I CCANNNNNTGG 1 cut(s) 158
AccBSI CCGCTC 1 cut(s) 364
AccII CGCG 1 cut(s) 2197
AciI CCGC 7 cut(s) 225, 315, 364, 599, 706, 859, 1745
AclWI GGATC 3 cut(s) 452, 926, 953
AcsI RAATTY 5 cut(s) 217, 255, 356, 1161, 1654
AcuI CTGAAG 3 cut(s) 123, 909, 2043
AfaI GTAC 6 cut(s) 10, 368, 904, 1329, 1860, 2142
AfiI CCNNNNNNNGG 6 cut(s) 158, 467, 507, 650, 968, 1650
AflIII ACRYGT 2 cut(s) 616, 1234
AgsI TTSAA 7 cut(s) 215, 1069, 1127, 1391, 1496, 1543, 1706
AhlI ACTAGT 1 cut(s) 1718
AjiI CACGTC 1 cut(s) 1876
AjnI CCWGG 2 cut(s) 275, 500
AjuI GAANNNNNNNTTGG 2 cut(s) 1935, 1967
AloI GAACNNNNNNTCC 2 cut(s) 2185, 2217
Alw26I GTCTC 8 cut(s) 739, 960, 1369, 1474, 1579, 1684, 1789, 1866
AlwI GGATC 3 cut(s) 452, 926, 953
AlwNI CAGNNNCTG 1 cut(s) 449
Ama87I CYCGRG 1 cut(s) 22
AoxI GGCC 2 cut(s) 1102, 2083
ApeKI GCWGC 5 cut(s) 305, 497, 838, 998, 1640
ApoI RAATTY 5 cut(s) 217, 255, 356, 1161, 1654
AseI ATTAAT 1 cut(s) 740
AspLEI GCGC 1 cut(s) 517
AspS9I GGNCC 1 cut(s) 19
AvaI CYCGRG 1 cut(s) 22
AvaII GGWCC 1 cut(s) 19
BanI GGYRCC 3 cut(s) 640, 1258, 1304
BarI GAAGNNNNNNTAC 2 cut(s) 1845, 1877
BbsI GAAGAC 2 cut(s) 111, 1464
BbvCI CCTCAGC 1 cut(s) 339
BbvI GCAGC 5 cut(s) 317, 509, 825, 1010, 1652
BccI CCATC 4 cut(s) 389, 675, 770, 1814
BceAI ACGGC 2 cut(s) 999, 1221
BciT130I CCWGG 2 cut(s) 277, 502
BcoDI GTCTC 8 cut(s) 739, 960, 1369, 1474, 1579, 1684, 1789, 1866
BcuI ACTAGT 1 cut(s) 1718
BfaI CTAG 5 cut(s) 797, 929, 1002, 1719, 1841
BfmI CTRYAG 1 cut(s) 2108
BisI GCNGC 6 cut(s) 306, 498, 600, 839, 999, 1641
BlpI GCTNAGC 1 cut(s) 1134
BlsI GCNGC 6 cut(s) 307, 499, 601, 840, 1000, 1642
BmcAI AGTACT 3 cut(s) 10, 904, 1329
Bme1390I CCNGG 2 cut(s) 277, 502
Bme18I GGWCC 1 cut(s) 19
BmeT110I CYCGRG 1 cut(s) 22
BmgBI CACGTC 1 cut(s) 1876
BmgT120I GGNCC 1 cut(s) 19
BmiI GGNNCC 7 cut(s) 21, 583, 642, 1260, 1306, 1621, 1726
BmrFI CCNGG 2 cut(s) 277, 502
BmsI GCATC 6 cut(s) 262, 337, 430, 693, 700, 1600
BpiI GAAGAC 2 cut(s) 111, 1464
BpmI CTGGAG 1 cut(s) 91
Bpu10I CCTNAGC 1 cut(s) 339
Bpu1102I GCTNAGC 1 cut(s) 1134
BpuEI CTTGAG 1 cut(s) 2206
BsaI GGTCTC 1 cut(s) 1789
BsaJI CCNNGG 3 cut(s) 276, 461, 501
Bsc4I CCNNNNNNNGG 6 cut(s) 158, 467, 507, 650, 968, 1650
Bse1I ACTGG 1 cut(s) 74
Bse3DI GCAATG 1 cut(s) 315
BseBI CCWGG 2 cut(s) 277, 502
BseDI CCNNGG 3 cut(s) 276, 461, 501
BseGI GGATG 4 cut(s) 352, 715, 781, 1024
BseLI CCNNNNNNNGG 6 cut(s) 158, 467, 507, 650, 968, 1650
BseMI GCAATG 1 cut(s) 315
BseMII CTCAG 4 cut(s) 330, 1120, 1180, 1893
BseNI ACTGG 1 cut(s) 74
BseRI GAGGAG 1 cut(s) 356
BseXI GCAGC 5 cut(s) 317, 509, 825, 1010, 1652
BsgI GTGCAG 1 cut(s) 581
Bsh1236I CGCG 1 cut(s) 2197
Bsh1285I CGRYCG 1 cut(s) 859
BshFI GGCC 2 cut(s) 1104, 2085
BshNI GGYRCC 3 cut(s) 640, 1258, 1304
BsiEI CGRYCG 1 cut(s) 859
BsiHKCI CYCGRG 1 cut(s) 22
BslFI GGGAC 5 cut(s) 5, 293, 627, 1245, 2114
BslI CCNNNNNNNGG 6 cut(s) 158, 467, 507, 650, 968, 1650
BsmAI GTCTC 8 cut(s) 739, 960, 1369, 1474, 1579, 1684, 1789, 1866
BsmBI CGTCTC 3 cut(s) 739, 960, 1866
BsmFI GGGAC 5 cut(s) 5, 293, 627, 1245, 2114
BsmI GAATGC 2 cut(s) 196, 2180
BsnI GGCC 2 cut(s) 1104, 2085
Bso31I GGTCTC 1 cut(s) 1789
BsoBI CYCGRG 1 cut(s) 22
Bsp143I GATC 5 cut(s) 457, 648, 931, 958, 1345
Bsp1720I GCTNAGC 1 cut(s) 1134
BspACI CCGC 7 cut(s) 225, 315, 364, 599, 706, 859, 1745
BspANI GGCC 2 cut(s) 1104, 2085
BspCNI CTCAG 4 cut(s) 331, 1119, 1179, 1894
BspFNI CGCG 1 cut(s) 2197
BspHI TCATGA 3 cut(s) 1213, 1749, 1864
BspLI GGNNCC 7 cut(s) 21, 583, 642, 1260, 1306, 1621, 1726
BspPI GGATC 3 cut(s) 452, 926, 953
BspQI GCTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
BspT107I GGYRCC 3 cut(s) 640, 1258, 1304
BspTNI GGTCTC 1 cut(s) 1789
BsrBI CCGCTC 1 cut(s) 364
BsrDI GCAATG 1 cut(s) 315
BsrI ACTGG 1 cut(s) 74
BssECI CCNNGG 3 cut(s) 276, 461, 501
BssMI GATC 5 cut(s) 457, 648, 931, 958, 1345
BssT1I CCWWGG 1 cut(s) 461
Bst2UI CCWGG 2 cut(s) 277, 502
Bst4CI ACNGT 7 cut(s) 451, 636, 721, 971, 1779, 2045, 2231
Bst6I CTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
BstAPI GCANNNNNTGC 1 cut(s) 272
BstC8I GCNNGC 2 cut(s) 513, 1934
BstDEI CTNAG 7 cut(s) 339, 920, 1106, 1134, 1166, 1184, 1902
BstF5I GGATG 4 cut(s) 352, 715, 781, 1024
BstFNI CGCG 1 cut(s) 2197
BstHHI GCGC 1 cut(s) 517
BstKTI GATC 5 cut(s) 460, 651, 934, 961, 1348
BstMAI GTCTC 8 cut(s) 739, 960, 1369, 1474, 1579, 1684, 1789, 1866
BstMBI GATC 5 cut(s) 457, 648, 931, 958, 1345
BstMCI CGRYCG 1 cut(s) 859
BstMWI GCNNNNNNNGC 6 cut(s) 272, 314, 596, 950, 1938, 1964
BstNI CCWGG 2 cut(s) 277, 502
BstNSI RCATGY 7 cut(s) 209, 515, 620, 1016, 1238, 1936, 1971
BstSCI CCNGG 2 cut(s) 275, 500
BstSFI CTRYAG 1 cut(s) 2108
BstUI CGCG 1 cut(s) 2197
BstV1I GCAGC 5 cut(s) 317, 509, 825, 1010, 1652
BstV2I GAAGAC 2 cut(s) 111, 1464
BstX2I RGATCY 3 cut(s) 457, 931, 958
BstXI CCANNNNNNTGG 1 cut(s) 1962
BstYI RGATCY 3 cut(s) 457, 931, 958
BsuRI GGCC 2 cut(s) 1104, 2085
BtrI CACGTC 1 cut(s) 1876
BtsCI GGATG 4 cut(s) 352, 715, 781, 1024
BtsI GCAGTG 2 cut(s) 609, 1728
BtsIMutI CAGTG 5 cut(s) 67, 609, 1074, 1114, 1728
Cac8I GCNNGC 2 cut(s) 513, 1934
CaiI CAGNNNCTG 1 cut(s) 449
CciI TCATGA 3 cut(s) 1213, 1749, 1864
CfoI GCGC 1 cut(s) 517
Cfr13I GGNCC 1 cut(s) 19
CseI GACGC 1 cut(s) 950
Csp6I GTAC 6 cut(s) 9, 367, 903, 1328, 1859, 2141
CviQI GTAC 6 cut(s) 9, 367, 903, 1328, 1859, 2141
DdeI CTNAG 7 cut(s) 339, 920, 1106, 1134, 1166, 1184, 1902
DpnI GATC 5 cut(s) 459, 650, 933, 960, 1347
DpnII GATC 5 cut(s) 457, 648, 931, 958, 1345
DraI TTTAAA 1 cut(s) 327
Eam1104I CTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
EarI CTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
EciI GGCGGA 1 cut(s) 304
Eco130I CCWWGG 1 cut(s) 461
Eco147I AGGCCT 1 cut(s) 2085
Eco31I GGTCTC 1 cut(s) 1789
Eco47I GGWCC 1 cut(s) 19
Eco57I CTGAAG 3 cut(s) 123, 909, 2043
Eco88I CYCGRG 1 cut(s) 22
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 2 cut(s) 275, 500
EcoT14I CCWWGG 1 cut(s) 461
EcoT22I ATGCAT 4 cut(s) 1767, 1898, 2175, 2182
ErhI CCWWGG 1 cut(s) 461
Esp3I CGTCTC 3 cut(s) 739, 960, 1866
FaqI GGGAC 5 cut(s) 5, 293, 627, 1245, 2114
FauI CCCGC 2 cut(s) 218, 699
FauNDI CATATG 2 cut(s) 844, 1761
Fnu4HI GCNGC 6 cut(s) 306, 498, 600, 839, 999, 1641
FokI GGATG 4 cut(s) 359, 722, 788, 1031
Fsp4HI GCNGC 6 cut(s) 306, 498, 600, 839, 999, 1641
FspAI RTGCGCAY 1 cut(s) 516
FspBI CTAG 5 cut(s) 797, 929, 1002, 1719, 1841
FspI TGCGCA 1 cut(s) 516
GlaI GCGC 1 cut(s) 516
GluI GCNGC 6 cut(s) 306, 498, 600, 839, 999, 1641
GsuI CTGGAG 1 cut(s) 91
HaeIII GGCC 2 cut(s) 1104, 2085
HgaI GACGC 1 cut(s) 950
HhaI GCGC 1 cut(s) 517
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HindIII AAGCTT 1 cut(s) 1803
HinfI GANTC 4 cut(s) 25, 81, 1927, 1946
Hpy166II GTNNAC 1 cut(s) 622
Hpy188I TCNGA 2 cut(s) 653, 702
Hpy8I GTNNAC 1 cut(s) 622
HpyCH4III ACNGT 7 cut(s) 451, 636, 721, 971, 1779, 2045, 2231
HpyCH4IV ACGT 1 cut(s) 1875
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 314, 596, 950, 1938, 1964
HpyF3I CTNAG 7 cut(s) 339, 920, 1106, 1134, 1166, 1184, 1902
HpySE526I ACGT 1 cut(s) 1875
HspAI GCGC 1 cut(s) 515
Kzo9I GATC 5 cut(s) 457, 648, 931, 958, 1345
LguI GCTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
LmnI GCTCC 1 cut(s) 1977
Lsp1109I GCAGC 5 cut(s) 317, 509, 825, 1010, 1652
LweI GCATC 6 cut(s) 262, 337, 430, 693, 700, 1600
MaeI CTAG 5 cut(s) 797, 929, 1002, 1719, 1841
MaeII ACGT 1 cut(s) 1875
MaeIII GTNAC 8 cut(s) 445, 658, 674, 779, 883, 1144, 1409, 1514
MalI GATC 5 cut(s) 459, 650, 933, 960, 1347
MbiI CCGCTC 1 cut(s) 364
MboI GATC 5 cut(s) 457, 648, 931, 958, 1345
MflI RGATCY 3 cut(s) 457, 931, 958
MlyI GAGTC 1 cut(s) 34
MmeI TCCRAC 1 cut(s) 2042
Mph1103I ATGCAT 4 cut(s) 1767, 1898, 2175, 2182
MseI TTAA 4 cut(s) 326, 740, 828, 2070
MslI CAYNNNNRTG 4 cut(s) 471, 1017, 1127, 1972
MspR9I CCNGG 2 cut(s) 277, 502
Mva1269I GAATGC 2 cut(s) 196, 2180
MvaI CCWGG 2 cut(s) 277, 502
MvnI CGCG 1 cut(s) 2197
MwoI GCNNNNNNNGC 6 cut(s) 272, 314, 596, 950, 1938, 1964
NdeI CATATG 2 cut(s) 844, 1761
NdeII GATC 5 cut(s) 457, 648, 931, 958, 1345
NlaIV GGNNCC 7 cut(s) 21, 583, 642, 1260, 1306, 1621, 1726
NmuCI GTSAC 2 cut(s) 883, 1409
NsbI TGCGCA 1 cut(s) 516
NsiI ATGCAT 4 cut(s) 1767, 1898, 2175, 2182
NspI RCATGY 7 cut(s) 209, 515, 620, 1016, 1238, 1936, 1971
PaeI GCATGC 2 cut(s) 515, 1936
PagI TCATGA 3 cut(s) 1213, 1749, 1864
PceI AGGCCT 1 cut(s) 2085
PciI ACATGT 2 cut(s) 616, 1234
PciSI GCTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
PcsI WCGNNNNNNNCGW 1 cut(s) 474
PctI GAATGC 2 cut(s) 196, 2180
PfeI GAWTC 3 cut(s) 81, 1927, 1946
PflMI CCANNNNNTGG 1 cut(s) 158
PkrI GCNGC 6 cut(s) 307, 499, 601, 840, 1000, 1642
PleI GAGTC 1 cut(s) 33
PpsI GAGTC 1 cut(s) 33
PscI ACATGT 2 cut(s) 616, 1234
PshBI ATTAAT 1 cut(s) 740
Psp6I CCWGG 2 cut(s) 275, 500
PspGI CCWGG 2 cut(s) 275, 500
PspN4I GGNNCC 7 cut(s) 21, 583, 642, 1260, 1306, 1621, 1726
PspPI GGNCC 1 cut(s) 19
PstNI CAGNNNCTG 1 cut(s) 449
PsuI RGATCY 3 cut(s) 457, 931, 958
RsaI GTAC 6 cut(s) 10, 368, 904, 1329, 1860, 2142
RsaNI GTAC 6 cut(s) 9, 367, 903, 1328, 1859, 2141
RseI CAYNNNNRTG 4 cut(s) 471, 1017, 1127, 1972
SapI GCTCTTC 8 cut(s) 492, 690, 795, 993, 1215, 1425, 1635, 1740
SaqAI TTAA 4 cut(s) 326, 740, 828, 2070
SatI GCNGC 6 cut(s) 306, 498, 600, 839, 999, 1641
Sau3AI GATC 5 cut(s) 457, 648, 931, 958, 1345
Sau96I GGNCC 1 cut(s) 19
ScaI AGTACT 3 cut(s) 10, 904, 1329
SchI GAGTC 1 cut(s) 34
ScrFI CCNGG 2 cut(s) 277, 502
SfaNI GCATC 6 cut(s) 262, 337, 430, 693, 700, 1600
SfcI CTRYAG 1 cut(s) 2108
SinI GGWCC 1 cut(s) 19
SmiMI CAYNNNNRTG 4 cut(s) 471, 1017, 1127, 1972
SmlI CTYRAG 1 cut(s) 2185
SmoI CTYRAG 1 cut(s) 2185
SpeI ACTAGT 1 cut(s) 1718
SphI GCATGC 2 cut(s) 515, 1936
SseBI AGGCCT 1 cut(s) 2085
SsiI CCGC 7 cut(s) 225, 315, 364, 599, 706, 859, 1745
SspI AATATT 1 cut(s) 1920
SspMI CTAG 5 cut(s) 797, 929, 1002, 1719, 1841
StuI AGGCCT 1 cut(s) 2085
StyD4I CCNGG 2 cut(s) 275, 500
StyI CCWWGG 1 cut(s) 461
TaaI ACNGT 7 cut(s) 451, 636, 721, 971, 1779, 2045, 2231
TaiI ACGT 1 cut(s) 1878
TaqI TCGA 3 cut(s) 84, 360, 855
TatI WGTACW 3 cut(s) 8, 902, 1327
TauI GCSGC 1 cut(s) 602
TfiI GAWTC 3 cut(s) 81, 1927, 1946
Tru1I TTAA 4 cut(s) 326, 740, 828, 2070
Tru9I TTAA 4 cut(s) 326, 740, 828, 2070
TscAI CASTG 5 cut(s) 74, 609, 1081, 1114, 1735
TseFI GTSAC 2 cut(s) 883, 1409
TseI GCWGC 5 cut(s) 305, 497, 838, 998, 1640
Tsp45I GTSAC 2 cut(s) 883, 1409
TspGWI ACGGA 3 cut(s) 483, 1349, 1884
TspRI CASTG 5 cut(s) 74, 609, 1081, 1114, 1735
Van91I CCANNNNNTGG 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 19
VspI ATTAAT 1 cut(s) 740
XapI RAATTY 5 cut(s) 217, 255, 356, 1161, 1654
XceI RCATGY 7 cut(s) 209, 515, 620, 1016, 1238, 1936, 1971
XspI CTAG 5 cut(s) 797, 929, 1002, 1719, 1841
ZrmI AGTACT 3 cut(s) 10, 904, 1329
Zsp2I ATGCAT 4 cut(s) 1767, 1898, 2175, 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.