Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003839.1

Orthogroup ID

OG0004762

Physical Location & Seq

Genomic Coordinates Forward (+)

11701 .. 24487

Gene Structure 12787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

atgggagctactatagaagatcatctatccaaaagggtcacacacatatttgctatgaacccagaagcccttttgcaaaaagtgggcagtgatcaatggggtctctttaaaggaagagttgtactctatcagtggctagaggacagcttaagctcagggaagagagtaccagaagatttgtaccatctgaaattggagtcagataagtcttctagtgattacatttccagtgatgaagaaaccccaaaactgaaaaggcgaagatcctcatctcctgatgagttgcctcatactccgagccccaaaacccctaaagccccaaataaggatcaggtcacagcattgcagtcatccacgccctacaacccacctgatttaaacaaagatataacccagatatttgagaagcttatcaacatatatagaggtgaggagttaaccgttattgagaagttgcctttcaagattcaaagtgcagaacaagttaagggcctcccgggcattggaaagtcaatgcaagatcatattcaagagatagtgactaccggaaagctatccaagttggagcactttgaaacagatgaaaaggtctacccgcgggacatatatgcatttggactaatagcttggacagggaatgatgtgctgaacaggaggttgaggttactagctgaatctagaggattccggcttgacgatacggggctgtttccggccactcatggatctggcggaaaacggggggcaaaagctggcgcaagcttgaaatttgacacagaaaaggaggtctttgactttctcgggtttccttggcttgaaccacaagagagaaatctagtgtctgttgatttgatccgaggacccaatgtaccgagctttgcattgggcccaagatttgaaaatgggctttatgcttgctatgctcttgttgacgaacaaattaatcgggctcaagcttcaaagattcaggaaatagtgactaccgggaagttatccaagttggagcattttgaaacagatgaaaaggtacgaactatcagcttatttggggaagtttggggcgttggtccagctactgcacaaaaattgtatgagaaaggacaccgcacattagatgatctgaagaatgaagaatcattaacaaattcacagaagttagggttaaaatattttgatgatatcaaacagagaattccacgcaatgaagctcaggagatggaacgtctactacagaaagctggagaagatgttttgcctggggtggacattgtatgtggaggatcatatagacgcgggaaagcttcttgtggggatctggacattataattacacatcctgatggaaaaagtcatagaggctttttacccaaatacgtaaagcatttaaaggatatgaagtttctaagggaggatctggttttcagtgtacacagtgaggagggtactgattctggtgtcgacacatattttgggctttgcacatatcctggacgagagctgcgccaccgcatagatatcaaggtctacccacgggaaatatatgcatttgcgctaatacattggacaggcaatgatgtattgaataggaggttgagagttctagccgaatctaaaggattcctacttgatgatgatgggctatttccagctacacggggctctctcggtcaacggggcatgagaggtagcgcaagcttgaaatttgacacagaaaaggaggtctttgagtttctcgggtttccttggcttgaaccacaagagagaaatctgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006287 GO:0006289 GO:0006302 GO:0006303 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016740 GO:0016772 GO:0016779 GO:0016829 GO:0016835 GO:0018130 GO:0019438 GO:0030145 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051575 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097510 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko03450 map03410 map03450

Pfam Domains

Protein Families

BRCT DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 LIM

Protein Analysis

590

Amino Acids

66.73

Weight (kDa)

6.36

Isoelectric Point (pI)

39.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HHH_8	PF14716	147 - 185	1.1e-08	Helix-hairpin-helix domain
DNA_pol_B_thumb	PF14791	207 - 278	2.8e-19	DNA polymerase beta thumb
DNA_pol_lambd_f	PF10391	348 - 394	5.1e-20	Fingers domain of DNA polymerase lambda
DNA_pol_B_palm	PF14792	397 - 511	6.3e-30	DNA polymerase beta palm
DNA_pol_B_thumb	PF14791	517 - 589	7.9e-19	DNA polymerase beta thumb

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10520 AT1G10520
fragaria_vesca	FvH4_4g35010 FvH4_4g35030
malus_domestica	MD16G1086600.v1.1 MD16G1086700.v1.1
prunus_persica	Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1
pyrus_communis	pycom16g07470
rosa_chinensis	RchiOBHm_Chr4g0444541 RchiOBHm_Chr4g0444551
rosa_laevigata	RLG00000005822 RLG00000005825
rosa_multiflora	Rmu_sc0003839.1_g000005 Rmu_sc0012648.1_g000007
rosa_roxburghii	Rroxscaffold_5G00385000 Rroxscaffold_5G00385010
rosa_rugosa	Rorug04G0353500 Rorug04G0353600 Rorug04G0353700 Rorug04G0353800
rosa_samantha	Rh4AG413800 Rh4BG425500 Rh4CG439900 Rh4CG440200 Rh4DG420800 Rh4DG421100
rosa_wichuraiana	Rw4G035540 Rw4G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1325
AccI	GTMKAC	4 cut(s)	591, 1225, 1458, 1524
AccII	CGCG	2 cut(s)	598, 1293
AciI	CCGC	6 cut(s)	596, 598, 732, 1105, 1293, 1507
AclWI	GGATC	7 cut(s)	258, 336, 733, 847, 1288, 1320, 1419
AcoI	YGGCCR	1 cut(s)	714
AcsI	RAATTY	4 cut(s)	767, 1144, 1191, 1700
AcuI	CTGAAG	1 cut(s)	1142
AfaI	GTAC	7 cut(s)	123, 168, 182, 870, 1029, 1428, 1444
AfiI	CCNNNNNNNGG	2 cut(s)	325, 503
AflII	CTTAAG	1 cut(s)	148
AjnI	CCWGG	2 cut(s)	1255, 1486
Alw21I	GWGCWC	1 cut(s)	570
Alw26I	GTCTC	1 cut(s)	107
AlwI	GGATC	7 cut(s)	258, 336, 733, 847, 1288, 1320, 1419
AlwNI	CAGNNNCTG	1 cut(s)	1076
Ama87I	CYCGRG	3 cut(s)	496, 800, 1733
AoxI	GGCC	3 cut(s)	490, 714, 886
ApaI	GGGCCC	1 cut(s)	890
ApeKI	GCWGC	1 cut(s)	1498
ApoI	RAATTY	4 cut(s)	767, 1144, 1191, 1700
ArsI	GACNNNNNNTTYG	2 cut(s)	1451, 1483
AseI	ATTAAT	1 cut(s)	942
AspLEI	GCGC	4 cut(s)	758, 1503, 1552, 1691
AspS9I	GGNCC	5 cut(s)	490, 860, 886, 887, 1067
AsuC2I	CCSGG	3 cut(s)	497, 498, 985
AsuHPI	GGTGA	1 cut(s)	440
AvaI	CYCGRG	3 cut(s)	496, 800, 1733
AvaII	GGWCC	2 cut(s)	860, 1067
BaeGI	GKGCMC	1 cut(s)	890
BanII	GRGCYC	4 cut(s)	302, 890, 952, 1661
BbsI	GAAGAC	1 cut(s)	201
Bbv12I	GWGCWC	1 cut(s)	570
BbvI	GCAGC	1 cut(s)	1485
BccI	CCATC	4 cut(s)	192, 1210, 1334, 1628
BciT130I	CCWGG	2 cut(s)	1257, 1488
BclI	TGATCA	1 cut(s)	91
BcnI	CCSGG	3 cut(s)	497, 498, 985
BcoDI	GTCTC	1 cut(s)	107
BfaI	CTAG	6 cut(s)	137, 213, 668, 678, 836, 1601
BfmI	CTRYAG	2 cut(s)	12, 1229
BfrI	CTTAAG	1 cut(s)	148
BglI	GCCNNNNNGGC	1 cut(s)	498
BisI	GCNGC	1 cut(s)	1499
BlsI	GCNGC	1 cut(s)	1500
Bme1390I	CCNGG	5 cut(s)	497, 498, 985, 1257, 1488
Bme18I	GGWCC	2 cut(s)	860, 1067
BmeT110I	CYCGRG	3 cut(s)	496, 800, 1733
BmgT120I	GGNCC	5 cut(s)	490, 860, 886, 887, 1067
BmiI	GGNNCC	2 cut(s)	862, 888
BmrFI	CCNGG	5 cut(s)	497, 498, 985, 1257, 1488
BpiI	GAAGAC	1 cut(s)	201
BplI	GAGNNNNNCTC	2 cut(s)	108, 140
BpmI	CTGGAG	1 cut(s)	1260
Bpu10I	CCTNAGC	2 cut(s)	154, 1209
BpuEI	CTTGAG	1 cut(s)	936
BpuMI	CCSGG	3 cut(s)	497, 498, 985
BsaAI	YACGTR	1 cut(s)	1375
BsaBI	GATNNNNATC	1 cut(s)	268
BsaI	GGTCTC	1 cut(s)	107
BsaJI	CCNNGG	7 cut(s)	496, 596, 809, 856, 1256, 1529, 1742
BsaWI	WCCGGW	1 cut(s)	545
BsaXI	ACNNNNNCTCC	2 cut(s)	1233, 1263
Bsc4I	CCNNNNNNNGG	2 cut(s)	325, 503
Bse1I	ACTGG	1 cut(s)	228
Bse3DI	GCAATG	3 cut(s)	341, 1207, 1576
Bse8I	GATNNNNATC	1 cut(s)	268
BseBI	CCWGG	2 cut(s)	1257, 1488
BseDI	CCNNGG	7 cut(s)	496, 596, 809, 856, 1256, 1529, 1742
BseGI	GGATG	2 cut(s)	350, 1333
BseJI	GATNNNNATC	1 cut(s)	268
BseLI	CCNNNNNNNGG	2 cut(s)	325, 503
BseMI	GCAATG	3 cut(s)	341, 1207, 1576
BseMII	CTCAG	2 cut(s)	168, 1223
BseNI	ACTGG	1 cut(s)	228
BseRI	GAGGAG	2 cut(s)	446, 1451
BseSI	GKGCMC	1 cut(s)	890
BseXI	GCAGC	1 cut(s)	1485
BsgI	GTGCAG	2 cut(s)	495, 1062
Bsh1236I	CGCG	2 cut(s)	598, 1293
BshFI	GGCC	3 cut(s)	492, 716, 888
BsiHKAI	GWGCWC	1 cut(s)	570
BsiHKCI	CYCGRG	3 cut(s)	496, 800, 1733
BsiSI	CCGG	5 cut(s)	497, 546, 688, 713, 984
BslFI	GGGAC	1 cut(s)	614
BslI	CCNNNNNNNGG	2 cut(s)	325, 503
BsmAI	GTCTC	1 cut(s)	107
BsmFI	GGGAC	1 cut(s)	614
BsnI	GGCC	3 cut(s)	492, 716, 888
Bso31I	GGTCTC	1 cut(s)	107
BsoBI	CYCGRG	3 cut(s)	496, 800, 1733
Bsp120I	GGGCCC	1 cut(s)	886
Bsp1286I	GDGCHC	5 cut(s)	302, 570, 890, 952, 1661
Bsp1407I	TGTACA	1 cut(s)	1426
BspACI	CCGC	6 cut(s)	596, 598, 732, 1105, 1293, 1507
BspANI	GGCC	3 cut(s)	492, 716, 888
BspCNI	CTCAG	2 cut(s)	167, 1222
BspFNI	CGCG	2 cut(s)	598, 1293
BspLI	GGNNCC	2 cut(s)	862, 888
BspPI	GGATC	7 cut(s)	258, 336, 733, 847, 1288, 1320, 1419
BspTI	CTTAAG	1 cut(s)	148
BspTNI	GGTCTC	1 cut(s)	107
BsrDI	GCAATG	3 cut(s)	341, 1207, 1576
BsrGI	TGTACA	1 cut(s)	1426
BsrI	ACTGG	1 cut(s)	228
BssECI	CCNNGG	7 cut(s)	496, 596, 809, 856, 1256, 1529, 1742
BssT1I	CCWWGG	2 cut(s)	809, 1742
Bst2UI	CCWGG	2 cut(s)	1257, 1488
Bst4CI	ACNGT	2 cut(s)	442, 1433
Bst6I	CTCTTC	2 cut(s)	109, 155
BstAFI	CTTAAG	1 cut(s)	148
BstAUI	TGTACA	1 cut(s)	1426
BstBAI	YACGTR	1 cut(s)	1375
BstC8I	GCNNGC	4 cut(s)	754, 760, 916, 1693
BstDEI	CTNAG	3 cut(s)	154, 1209, 1403
BstDSI	CCRYGG	2 cut(s)	596, 1529
BstF5I	GGATG	2 cut(s)	350, 1333
BstFNI	CGCG	2 cut(s)	598, 1293
BstHHI	GCGC	4 cut(s)	758, 1503, 1552, 1691
BstMAI	GTCTC	1 cut(s)	107
BstMWI	GCNNNNNNNGC	2 cut(s)	498, 920
BstNI	CCWGG	2 cut(s)	1257, 1488
BstSCI	CCNGG	5 cut(s)	495, 496, 983, 1255, 1486
BstSFI	CTRYAG	2 cut(s)	12, 1229
BstSLI	GKGCMC	1 cut(s)	890
BstSNI	TACGTA	1 cut(s)	1375
BstUI	CGCG	2 cut(s)	598, 1293
BstV1I	GCAGC	1 cut(s)	1485
BstV2I	GAAGAC	1 cut(s)	201
BstX2I	RGATCY	4 cut(s)	263, 725, 1312, 1411
BstYI	RGATCY	4 cut(s)	263, 725, 1312, 1411
BsuRI	GGCC	3 cut(s)	492, 716, 888
BtgI	CCRYGG	2 cut(s)	596, 1529
BtsCI	GGATG	2 cut(s)	350, 1333
BtsI	GCAGTG	1 cut(s)	94
BtsIMutI	CAGTG	5 cut(s)	94, 137, 235, 1429, 1438
Cac8I	GCNNGC	4 cut(s)	754, 760, 916, 1693
CaiI	CAGNNNCTG	1 cut(s)	1076
CfoI	GCGC	4 cut(s)	758, 1503, 1552, 1691
Cfr13I	GGNCC	5 cut(s)	490, 860, 886, 887, 1067
Cfr42I	CCGCGG	1 cut(s)	599
Cfr9I	CCCGGG	1 cut(s)	496
CseI	GACGC	1 cut(s)	1299
Csp6I	GTAC	7 cut(s)	122, 167, 181, 869, 1028, 1427, 1443
CviAII	CATG	2 cut(s)	722, 1678
CviQI	GTAC	7 cut(s)	122, 167, 181, 869, 1028, 1427, 1443
DdeI	CTNAG	3 cut(s)	154, 1209, 1403
DraI	TTTAAA	3 cut(s)	109, 378, 1386
EaeI	YGGCCR	1 cut(s)	714
Eam1104I	CTCTTC	2 cut(s)	109, 155
EarI	CTCTTC	2 cut(s)	109, 155
EciI	GGCGGA	1 cut(s)	747
Eco105I	TACGTA	1 cut(s)	1375
Eco130I	CCWWGG	2 cut(s)	809, 1742
Eco24I	GRGCYC	4 cut(s)	302, 890, 952, 1661
Eco31I	GGTCTC	1 cut(s)	107
Eco32I	GATATC	2 cut(s)	1180, 1516
Eco47I	GGWCC	2 cut(s)	860, 1067
Eco57I	CTGAAG	1 cut(s)	1142
Eco88I	CYCGRG	3 cut(s)	496, 800, 1733
EcoO109I	RGGNCCY	2 cut(s)	490, 860
EcoRI	GAATTC	1 cut(s)	1191
EcoRII	CCWGG	2 cut(s)	1255, 1486
EcoRV	GATATC	2 cut(s)	1180, 1516
EcoT14I	CCWWGG	2 cut(s)	809, 1742
EcoT22I	ATGCAT	2 cut(s)	613, 1546
EcoT38I	GRGCYC	4 cut(s)	302, 890, 952, 1661
ErhI	CCWWGG	2 cut(s)	809, 1742
FaeI	CATG	2 cut(s)	725, 1681
FalI	AAGNNNNNCTT	4 cut(s)	773, 805, 1706, 1738
FaqI	GGGAC	1 cut(s)	614
FatI	CATG	2 cut(s)	721, 1677
FauI	CCCGC	3 cut(s)	591, 603, 1286
FbaI	TGATCA	1 cut(s)	91
FblI	GTMKAC	4 cut(s)	591, 1225, 1458, 1524
Fnu4HI	GCNGC	1 cut(s)	1499
FokI	GGATG	2 cut(s)	337, 1320
FriOI	GRGCYC	4 cut(s)	302, 890, 952, 1661
Fsp4HI	GCNGC	1 cut(s)	1499
FspBI	CTAG	6 cut(s)	137, 213, 668, 678, 836, 1601
GlaI	GCGC	4 cut(s)	757, 1502, 1551, 1690
GluI	GCNGC	1 cut(s)	1499
GsuI	CTGGAG	1 cut(s)	1260
HaeIII	GGCC	3 cut(s)	492, 716, 888
HapII	CCGG	5 cut(s)	497, 546, 688, 713, 984
HgaI	GACGC	1 cut(s)	1299
HhaI	GCGC	4 cut(s)	758, 1503, 1552, 1691
Hin1II	CATG	2 cut(s)	725, 1681
Hin6I	GCGC	4 cut(s)	756, 1501, 1550, 1689
HinP1I	GCGC	4 cut(s)	756, 1501, 1550, 1689
HincII	GTYRAC	4 cut(s)	438, 931, 1459, 1670
HindII	GTYRAC	4 cut(s)	438, 931, 1459, 1670
HindIII	AAGCTT	5 cut(s)	407, 760, 954, 1299, 1693
HinfI	GANTC	9 cut(s)	197, 466, 674, 684, 964, 1133, 1448, 1607, 1617
HpaI	GTTAAC	1 cut(s)	438
HpaII	CCGG	5 cut(s)	497, 546, 688, 713, 984
HphI	GGTGA	1 cut(s)	440
Hpy188I	TCNGA	5 cut(s)	189, 202, 297, 857, 1122
Hpy188III	TCNNGA	8 cut(s)	275, 463, 530, 678, 968, 1211, 1316, 1337
HpyCH4III	ACNGT	2 cut(s)	442, 1433
HpyCH4IV	ACGT	2 cut(s)	1222, 1374
HpyCH4V	TGCA	9 cut(s)	76, 346, 476, 517, 611, 881, 1079, 1479, 1544
HpyF10VI	GCNNNNNNNGC	2 cut(s)	498, 920
HpyF3I	CTNAG	3 cut(s)	154, 1209, 1403
HpySE526I	ACGT	2 cut(s)	1222, 1374
Hsp92II	CATG	2 cut(s)	725, 1681
HspAI	GCGC	4 cut(s)	756, 1501, 1550, 1689
Ksp22I	TGATCA	1 cut(s)	91
KspAI	GTTAAC	1 cut(s)	438
KspI	CCGCGG	1 cut(s)	599
LmnI	GCTCC	3 cut(s)	5, 565, 1003
Lsp1109I	GCAGC	1 cut(s)	1485
MaeI	CTAG	6 cut(s)	137, 213, 668, 678, 836, 1601
MaeII	ACGT	2 cut(s)	1222, 1374
MaeIII	GTNAC	5 cut(s)	37, 334, 538, 663, 976
MflI	RGATCY	4 cut(s)	263, 725, 1312, 1411
MhlI	GDGCHC	5 cut(s)	302, 570, 890, 952, 1661
MluCI	AATT	8 cut(s)	191, 767, 939, 1085, 1144, 1191, 1326, 1700
MlyI	GAGTC	1 cut(s)	206
MmeI	TCCRAC	2 cut(s)	543, 981
Mph1103I	ATGCAT	2 cut(s)	613, 1546
MseI	TTAA	9 cut(s)	108, 149, 377, 437, 486, 942, 1139, 1163, 1385
MslI	CAYNNNNRTG	1 cut(s)	1338
MspA1I	CMGCKG	1 cut(s)	598
MspCI	CTTAAG	1 cut(s)	148
MspI	CCGG	5 cut(s)	497, 546, 688, 713, 984
MspR9I	CCNGG	5 cut(s)	497, 498, 985, 1257, 1488
MvaI	CCWGG	2 cut(s)	1257, 1488
MvnI	CGCG	2 cut(s)	598, 1293
MwoI	GCNNNNNNNGC	2 cut(s)	498, 920
NciI	CCSGG	3 cut(s)	497, 498, 985
NlaIII	CATG	2 cut(s)	725, 1681
NlaIV	GGNNCC	2 cut(s)	862, 888
NmuCI	GTSAC	4 cut(s)	37, 334, 538, 976
NsiI	ATGCAT	2 cut(s)	613, 1546
PfeI	GAWTC	8 cut(s)	466, 674, 684, 964, 1133, 1448, 1607, 1617
PfoI	TCCNGGA	1 cut(s)	1486
PkrI	GCNGC	1 cut(s)	1500
PleI	GAGTC	1 cut(s)	205
PpsI	GAGTC	1 cut(s)	205
Ppu21I	YACGTR	1 cut(s)	1375
PpuMI	RGGWCCY	1 cut(s)	860
PshBI	ATTAAT	1 cut(s)	942
PsiI	TTATAA	1 cut(s)	1325
Psp5II	RGGWCCY	1 cut(s)	860
Psp6I	CCWGG	2 cut(s)	1255, 1486
PspGI	CCWGG	2 cut(s)	1255, 1486
PspN4I	GGNNCC	2 cut(s)	862, 888
PspOMI	GGGCCC	1 cut(s)	886
PspPI	GGNCC	5 cut(s)	490, 860, 886, 887, 1067
PspPPI	RGGWCCY	1 cut(s)	860
PsrI	GAACNNNNNNTAC	2 cut(s)	1212, 1244
PstNI	CAGNNNCTG	1 cut(s)	1076
PsuI	RGATCY	4 cut(s)	263, 725, 1312, 1411
RsaI	GTAC	7 cut(s)	123, 168, 182, 870, 1029, 1428, 1444
RsaNI	GTAC	7 cut(s)	122, 167, 181, 869, 1028, 1427, 1443
RseI	CAYNNNNRTG	1 cut(s)	1338
SacII	CCGCGG	1 cut(s)	599
SalI	GTCGAC	1 cut(s)	1457
SaqAI	TTAA	9 cut(s)	108, 149, 377, 437, 486, 942, 1139, 1163, 1385
SatI	GCNGC	1 cut(s)	1499
Sau96I	GGNCC	5 cut(s)	490, 860, 886, 887, 1067
SchI	GAGTC	1 cut(s)	206
ScrFI	CCNGG	5 cut(s)	497, 498, 985, 1257, 1488
SduI	GDGCHC	5 cut(s)	302, 570, 890, 952, 1661
SfcI	CTRYAG	2 cut(s)	12, 1229
Sfr303I	CCGCGG	1 cut(s)	599
SgrBI	CCGCGG	1 cut(s)	599
SinI	GGWCC	2 cut(s)	860, 1067
SmaI	CCCGGG	1 cut(s)	498
SmiMI	CAYNNNNRTG	1 cut(s)	1338
SmlI	CTYRAG	2 cut(s)	148, 951
SmoI	CTYRAG	2 cut(s)	148, 951
SnaBI	TACGTA	1 cut(s)	1375
Sse9I	AATT	8 cut(s)	191, 767, 939, 1085, 1144, 1191, 1326, 1700
SsiI	CCGC	6 cut(s)	596, 598, 732, 1105, 1293, 1507
SspI	AATATT	1 cut(s)	1169
SspMI	CTAG	6 cut(s)	137, 213, 668, 678, 836, 1601
StyD4I	CCNGG	5 cut(s)	495, 496, 983, 1255, 1486
StyI	CCWWGG	2 cut(s)	809, 1742
TaaI	ACNGT	2 cut(s)	442, 1433
TaiI	ACGT	2 cut(s)	1225, 1377
TaqI	TCGA	1 cut(s)	1458
TaqII	GACCGA	1 cut(s)	1655
TasI	AATT	8 cut(s)	191, 767, 939, 1085, 1144, 1191, 1326, 1700
TatI	WGTACW	2 cut(s)	121, 1426
TfiI	GAWTC	8 cut(s)	466, 674, 684, 964, 1133, 1448, 1607, 1617
Tru1I	TTAA	9 cut(s)	108, 149, 377, 437, 486, 942, 1139, 1163, 1385
Tru9I	TTAA	9 cut(s)	108, 149, 377, 437, 486, 942, 1139, 1163, 1385
TscAI	CASTG	5 cut(s)	94, 137, 235, 1429, 1438
TseFI	GTSAC	4 cut(s)	37, 334, 538, 976
TseI	GCWGC	1 cut(s)	1498
Tsp45I	GTSAC	4 cut(s)	37, 334, 538, 976
TspDTI	ATGAA	7 cut(s)	71, 249, 597, 1035, 1143, 1218, 1409
TspMI	CCCGGG	1 cut(s)	496
TspRI	CASTG	5 cut(s)	94, 137, 235, 1429, 1438
Vha464I	CTTAAG	1 cut(s)	148
VpaK11BI	GGWCC	2 cut(s)	860, 1067
VspI	ATTAAT	1 cut(s)	942
XapI	RAATTY	4 cut(s)	767, 1144, 1191, 1700
XbaI	TCTAGA	1 cut(s)	677
XmaI	CCCGGG	1 cut(s)	496
XmiI	GTMKAC	4 cut(s)	591, 1225, 1458, 1524
XspI	CTAG	6 cut(s)	137, 213, 668, 678, 836, 1601
Zsp2I	ATGCAT	2 cut(s)	613, 1546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.