Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003936.1

Orthogroup ID

OG0004801

Physical Location & Seq

Genomic Coordinates Forward (+)

165104 .. 171959

Gene Structure 6856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003936.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

atgtctcttacattcttctccaggcaggagctggccaaggccatcaacaacttctctcccaactccattatctgtgtaggtggattcggtccgatatacaaggctgagctctccaatggctctactgtggctttgaaatatttggactcaaatgcatttggagggttctcgtatattcatgctgaaataaaaacattagggaagctccgccatcccaatcttgtcaagcttctaggacgttgcatgtccagttccggcaggtttcttgtttatgagttcatcgagaatggtagtctccacgagtggctgcatggacagcggggagtccgggatccgatggcattgccttgggaaacaagaatgaagattgtgaagggtgttgctgatgctcttaaatatttgcatggattgcaaagaccagtcattcacagggatataaaggccggccatgtgttattggactctaattttgaggctcatcttactgattttgggctggctcgaatgttggaaccctcagagacgcacttgtcaacctatatcaatgctggttctttctggtataggccaccggagtatttattcagtaaggcatcatgggcgacattgaaaggcgatgtatacagctttggagttttgatgttggagatagcatctgggaagcctccgagttccatggacatccatccttccttcaggttacggcttcctcaatgtgccaagaagcttgttgcccaaaacatgcacatggatttagtggattcaaggattttgaggcaggacttaaacgaagctagtgttatagagtattttaggattgctcttagttgtctcaaaaaagaccccaagaaaagacctgaaatgagtaaggttgtacaaatgttgaatgaacttcccattattgagcatgatcttgacctcatcatctttgaagaccctcatgtccatgcttctcaagctttccttgatgatattgatgggctggatagcttcccggcggagatggatcccagtcgcgtcggcagcaagaagaggccaaccagaagctcaagagctccggccagaatccaatctctcgaccacgacatcctctgtatcatcttctcttttctcgacttcttcgacctcgcacgttgttccgtcgtctgcaaaacctggagtggtattgtcaacaagtcaaagttgctagaagcgctttactacaagaagtggcagatgggtcttgtgggttctgagaataggtccagtgggtgcccagagaaatctttgaatgtttatttggaggagatggctctgcagcatcatagactggcattacagctaggtcgaaattggagcacaacaactgctacagatatcgaaggcacatatgtggatgatatcattttcctaaccttgctttctattagggttgatcagtgccgaaagaagatgggtttgcttcttactggcattggtgataaggttatgcgcctttggtcattggaaagctataaatgtgtgggagaatatcccattccagacaaactccctttagttgactttgattttgatgagagcaagattgttggtttggtcggcagtcgtatatgcatatggaggcggaatgggataagaagtatattcccctcgcgtgagggcacctttccaaagggcttatgcatgcgttactgcgatcctgatgctgtggttggctgtgtggatgggacagctcgtgtatttgacatgtacagtcaacaatgttctcaaatcgttaaaatgcatgctggtccagtgacatgcttgtgtttgactgatgatcagttgatacttagcggttcttctcttggcagtatcacggtgtctaatcttttatctgatcagcgggttgcagaattaagactgacacattccacaggcataaggactttgtgtttcaacccctcatctcaccagctgtttgctggatcaactgctggatatgtattttgttgggacctcaggacaaggagatgtttatgggagacacgagtgagtccaaatgaggtatattcaatgcaacacctgagaaatgatgcatcaagcttggtggttggtggaatagatggtgtgctacgtatactgaatcagaacacaggtgaagtagtttcaagatttgttttggaaggcaacttattgtcaagttcaagttcaagttcaagttctcatcaacacgtagtgggaagtggcactgtccaaagaatgacaggacgaaggctttcacaaaatgcctcaattgatagcattcctagaagcagtcgacctcccatcacttgcttagcagtcgggatgaagaaggttatcaccacacacaataataagtacatcagaacgtggaagttcaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

788

Amino Acids

88.34

Weight (kDa)

8.86

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52030 AT3G52030
fragaria_vesca	FvH4_2g17910 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770 FvH4_7g01770
malus_domestica	MD07G1016900.v1.1 MD07G1023200.v1.1
prunus_persica	Prupe.2G024000_v2.0.a1
pyrus_communis	pycom07g01760
rosa_chinensis	RchiOBHm_Chr1g0318361
rosa_laevigata	RLG00000030542
rosa_multiflora	Rmu_sc0002662.1_g000010 Rmu_sc0003936.1_g000037
rosa_roxburghii	Rroxscaffold_4G00329280
rosa_rugosa	Rorug01G0020800 Rorug01G0020900
rosa_samantha	Rh1AG032900 Rh1BG028800 Rh1CG031300 Rh1DG038200
rosa_wichuraiana	Rw1G002640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	529, 941
Acc36I	ACCTGC	1 cut(s)	249
AccB1I	GGYRCC	2 cut(s)	1251, 1640
AccI	GTMKAC	3 cut(s)	621, 2098, 2278
AccII	CGCG	2 cut(s)	1017, 1633
AciI	CCGC	6 cut(s)	208, 319, 998, 1603, 1815, 1864
AclWI	GGATC	6 cut(s)	326, 339, 1001, 1014, 1670, 1954
AcoI	YGGCCR	3 cut(s)	33, 445, 1059
AcuI	CTGAAG	1 cut(s)	679
AdeI	CACNNNGTG	1 cut(s)	2197
AfaI	GTAC	3 cut(s)	876, 1730, 2342
AfeI	AGCGCT	1 cut(s)	1194
AflIII	ACRYGT	2 cut(s)	1725, 2191
AjnI	CCWGG	2 cut(s)	20, 1154
AjuI	GAANNNNNNNTTGG	2 cut(s)	1262, 1294
AleI	CACNNNNGTG	1 cut(s)	1370
Alw21I	GWGCWC	3 cut(s)	111, 1057, 1340
Alw26I	GTCTC	5 cut(s)	9, 299, 515, 836, 1997
AlwI	GGATC	6 cut(s)	326, 339, 1001, 1014, 1670, 1954
AlwNI	CAGNNNCTG	1 cut(s)	31
Aor51HI	AGCGCT	1 cut(s)	1194
AoxI	GGCC	7 cut(s)	33, 39, 441, 445, 566, 1034, 1059
ApeKI	GCWGC	3 cut(s)	307, 1023, 1297
ArsI	GACNNNNNNTTYG	4 cut(s)	452, 484, 1532, 1564
Asp700I	GAANNNNTTC	1 cut(s)	2236
AspLEI	GCGC	2 cut(s)	1195, 1473
AspS9I	GGNCC	4 cut(s)	89, 1242, 1769, 1975
AsuC2I	CCSGG	2 cut(s)	329, 995
AsuHPI	GGTGA	4 cut(s)	1469, 1922, 2129, 2314
AvaII	GGWCC	4 cut(s)	89, 1242, 1769, 1975
AxyI	CCTNAGG	1 cut(s)	1979
BaeGI	GKGCMC	2 cut(s)	1256, 1643
BalI	TGGCCA	1 cut(s)	35
BamHI	GGATCC	2 cut(s)	331, 1006
BanI	GGYRCC	2 cut(s)	1251, 1640
BanII	GRGCYC	2 cut(s)	111, 1057
BauI	CACGAG	3 cut(s)	299, 1713, 2007
BbsI	GAAGAC	1 cut(s)	939
Bbv12I	GWGCWC	3 cut(s)	111, 1057, 1340
BbvI	GCAGC	3 cut(s)	294, 1035, 1309
BceAI	ACGGC	1 cut(s)	719
BcgI	CGANNNNNNTGC	4 cut(s)	325, 359, 1664, 1698
BciT130I	CCWGG	2 cut(s)	22, 1156
BclI	TGATCA	3 cut(s)	1414, 1798, 1858
BcnI	CCSGG	2 cut(s)	329, 995
BcoDI	GTCTC	5 cut(s)	9, 299, 515, 836, 1997
BfaI	CTAG	5 cut(s)	233, 795, 1187, 1322, 2268
BfmI	CTRYAG	2 cut(s)	1295, 1350
BfoI	RGCGCY	1 cut(s)	1196
BfuAI	ACCTGC	1 cut(s)	249
BisI	GCNGC	3 cut(s)	308, 1024, 1298
BlpI	GCTNAGC	2 cut(s)	105, 2296
BlsI	GCNGC	3 cut(s)	309, 1025, 1299
Bme1390I	CCNGG	4 cut(s)	22, 329, 995, 1156
Bme18I	GGWCC	4 cut(s)	89, 1242, 1769, 1975
BmgT120I	GGNCC	4 cut(s)	89, 1242, 1769, 1975
BmiI	GGNNCC	6 cut(s)	333, 513, 1008, 1253, 1642, 1976
BmrFI	CCNGG	4 cut(s)	22, 329, 995, 1156
BmrI	ACTGGG	1 cut(s)	1005
BmsI	GCATC	7 cut(s)	376, 602, 662, 1309, 1672, 2044, 2066
BmuI	ACTGGG	1 cut(s)	1005
BpiI	GAAGAC	1 cut(s)	939
BpmI	CTGGAG	2 cut(s)	4, 1177
Bpu1102I	GCTNAGC	2 cut(s)	105, 2296
BpuEI	CTTGAG	2 cut(s)	939, 1033
BpuMI	CCSGG	2 cut(s)	329, 995
BsaAI	YACGTR	2 cut(s)	2096, 2194
BsaJI	CCNNGG	3 cut(s)	36, 347, 675
BsaWI	WCCGGW	1 cut(s)	571
Bse118I	RCCGGY	1 cut(s)	443
Bse1I	ACTGG	7 cut(s)	249, 419, 1011, 1245, 1314, 1453, 1772
Bse21I	CCTNAGG	1 cut(s)	1979
Bse3DI	GCAATG	1 cut(s)	341
BseBI	CCWGG	2 cut(s)	22, 1156
BseDI	CCNNGG	3 cut(s)	36, 347, 675
BseGI	GGATG	7 cut(s)	211, 681, 685, 1086, 1381, 1708, 2313
BseMI	GCAATG	1 cut(s)	341
BseMII	CTCAG	5 cut(s)	96, 531, 1224, 1993, 2036
BseNI	ACTGG	7 cut(s)	249, 419, 1011, 1245, 1314, 1453, 1772
BseRI	GAGGAG	1 cut(s)	1298
BseSI	GKGCMC	2 cut(s)	1256, 1643
BseXI	GCAGC	3 cut(s)	294, 1035, 1309
Bsh1236I	CGCG	2 cut(s)	1017, 1633
BshFI	GGCC	7 cut(s)	35, 41, 443, 447, 568, 1036, 1061
BshNI	GGYRCC	2 cut(s)	1251, 1640
BsiHKAI	GWGCWC	3 cut(s)	111, 1057, 1340
BsiSI	CCGG	6 cut(s)	255, 328, 444, 572, 995, 1058
BslFI	GGGAC	2 cut(s)	1720, 1988
BsmAI	GTCTC	5 cut(s)	9, 299, 515, 836, 1997
BsmBI	CGTCTC	1 cut(s)	515
BsmFI	GGGAC	2 cut(s)	1720, 1988
BsmI	GAATGC	1 cut(s)	2262
BsnI	GGCC	7 cut(s)	35, 41, 443, 447, 568, 1036, 1061
Bsp1286I	GDGCHC	5 cut(s)	111, 1057, 1256, 1340, 1643
Bsp1407I	TGTACA	2 cut(s)	874, 1728
Bsp143I	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
Bsp1720I	GCTNAGC	2 cut(s)	105, 2296
Bsp19I	CCATGG	1 cut(s)	675
BspACI	CCGC	6 cut(s)	208, 319, 998, 1603, 1815, 1864
BspANI	GGCC	7 cut(s)	35, 41, 443, 447, 568, 1036, 1061
BspCNI	CTCAG	5 cut(s)	97, 530, 1225, 1992, 2037
BspFNI	CGCG	2 cut(s)	1017, 1633
BspLI	GGNNCC	6 cut(s)	333, 513, 1008, 1253, 1642, 1976
BspMAI	CTGCAG	1 cut(s)	1299
BspMI	ACCTGC	1 cut(s)	249
BspPI	GGATC	6 cut(s)	326, 339, 1001, 1014, 1670, 1954
BspT107I	GGYRCC	2 cut(s)	1251, 1640
BsrDI	GCAATG	1 cut(s)	341
BsrFI	RCCGGY	1 cut(s)	443
BsrGI	TGTACA	2 cut(s)	874, 1728
BsrI	ACTGG	7 cut(s)	249, 419, 1011, 1245, 1314, 1453, 1772
BssAI	RCCGGY	1 cut(s)	443
BssECI	CCNNGG	3 cut(s)	36, 347, 675
BssMI	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
BssNAI	GTATAC	2 cut(s)	622, 2099
BssSI	CACGAG	3 cut(s)	299, 1713, 2007
BssT1I	CCWWGG	3 cut(s)	36, 347, 675
Bst1107I	GTATAC	2 cut(s)	622, 2099
Bst2BI	CACGAG	3 cut(s)	299, 1713, 2007
Bst2UI	CCWGG	2 cut(s)	22, 1156
Bst4CI	ACNGT	4 cut(s)	127, 1733, 1840, 2212
Bst6I	CTCTTC	1 cut(s)	1025
BstAPI	GCANNNNNTGC	1 cut(s)	409
BstAUI	TGTACA	2 cut(s)	874, 1728
BstBAI	YACGTR	2 cut(s)	2096, 2194
BstC8I	GCNNGC	5 cut(s)	33, 445, 498, 1664, 1764
BstDEI	CTNAG	8 cut(s)	105, 517, 824, 1233, 1811, 1979, 2045, 2296
BstDSI	CCRYGG	1 cut(s)	675
BstF5I	GGATG	7 cut(s)	211, 681, 685, 1086, 1381, 1708, 2313
BstFNI	CGCG	2 cut(s)	1017, 1633
BstH2I	RGCGCY	1 cut(s)	1196
BstHHI	GCGC	2 cut(s)	1195, 1473
BstKTI	GATC	8 cut(s)	334, 913, 1009, 1417, 1678, 1801, 1861, 1949
BstMAI	GTCTC	5 cut(s)	9, 299, 515, 836, 1997
BstMBI	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
BstMWI	GCNNNNNNNGC	6 cut(s)	316, 409, 599, 956, 1023, 1192
BstNI	CCWGG	2 cut(s)	22, 1156
BstNSI	RCATGY	6 cut(s)	247, 745, 1666, 1729, 1766, 1782
BstSCI	CCNGG	4 cut(s)	20, 327, 993, 1154
BstSFI	CTRYAG	2 cut(s)	1295, 1350
BstSLI	GKGCMC	2 cut(s)	1256, 1643
BstSNI	TACGTA	1 cut(s)	2096
BstUI	CGCG	2 cut(s)	1017, 1633
BstV1I	GCAGC	3 cut(s)	294, 1035, 1309
BstV2I	GAAGAC	1 cut(s)	939
BstX2I	RGATCY	2 cut(s)	331, 1006
BstYI	RGATCY	2 cut(s)	331, 1006
BstZ17I	GTATAC	2 cut(s)	622, 2099
Bsu36I	CCTNAGG	1 cut(s)	1979
BsuRI	GGCC	7 cut(s)	35, 41, 443, 447, 568, 1036, 1061
BtgI	CCRYGG	1 cut(s)	675
BtgZI	GCGATG	1 cut(s)	630
BtsCI	GGATG	7 cut(s)	211, 681, 685, 1086, 1381, 1708, 2313
BtsIMutI	CAGTG	4 cut(s)	1252, 1424, 1779, 2208
BveI	ACCTGC	1 cut(s)	249
Cac8I	GCNNGC	5 cut(s)	33, 445, 498, 1664, 1764
CaiI	CAGNNNCTG	1 cut(s)	31
CfoI	GCGC	2 cut(s)	1195, 1473
Cfr10I	RCCGGY	1 cut(s)	443
Cfr13I	GGNCC	4 cut(s)	89, 1242, 1769, 1975
CpoI	CGGWCCG	1 cut(s)	89
CseI	GACGC	2 cut(s)	532, 1006
Csp6I	GTAC	3 cut(s)	875, 1729, 2341
CspCI	CAANNNNNGTGG	2 cut(s)	2049, 2084
CspI	CGGWCCG	1 cut(s)	89
CviQI	GTAC	3 cut(s)	875, 1729, 2341
DdeI	CTNAG	8 cut(s)	105, 517, 824, 1233, 1811, 1979, 2045, 2296
DpnI	GATC	8 cut(s)	333, 912, 1008, 1416, 1677, 1800, 1860, 1948
DpnII	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
DraIII	CACNNNGTG	1 cut(s)	2197
DrdI	GACNNNNNNGTC	2 cut(s)	529, 941
DseDI	GACNNNNNNGTC	2 cut(s)	529, 941
EaeI	YGGCCR	3 cut(s)	33, 445, 1059
Eam1104I	CTCTTC	1 cut(s)	1025
EarI	CTCTTC	1 cut(s)	1025
EciI	GGCGGA	3 cut(s)	197, 1013, 1618
Ecl136II	GAGCTC	2 cut(s)	109, 1055
Eco105I	TACGTA	1 cut(s)	2096
Eco130I	CCWWGG	3 cut(s)	36, 347, 675
Eco24I	GRGCYC	2 cut(s)	111, 1057
Eco32I	GATATC	2 cut(s)	1357, 1381
Eco47I	GGWCC	4 cut(s)	89, 1242, 1769, 1975
Eco47III	AGCGCT	1 cut(s)	1194
Eco53kI	GAGCTC	2 cut(s)	109, 1055
Eco57I	CTGAAG	1 cut(s)	679
Eco81I	CCTNAGG	1 cut(s)	1979
EcoICRI	GAGCTC	2 cut(s)	109, 1055
EcoO109I	RGGNCCY	1 cut(s)	1975
EcoRII	CCWGG	2 cut(s)	20, 1154
EcoRV	GATATC	2 cut(s)	1357, 1381
EcoT14I	CCWWGG	3 cut(s)	36, 347, 675
EcoT22I	ATGCAT	5 cut(s)	157, 1595, 1664, 1764, 2059
EcoT38I	GRGCYC	2 cut(s)	111, 1057
ErhI	CCWWGG	3 cut(s)	36, 347, 675
Esp3I	CGTCTC	1 cut(s)	515
FalI	AAGNNNNNCTT	2 cut(s)	948, 980
FaqI	GGGAC	2 cut(s)	1720, 1988
FauI	CCCGC	2 cut(s)	312, 1857
FauNDI	CATATG	2 cut(s)	1369, 1595
FbaI	TGATCA	3 cut(s)	1414, 1798, 1858
FblI	GTMKAC	3 cut(s)	621, 2098, 2278
Fnu4HI	GCNGC	3 cut(s)	308, 1024, 1298
FokI	GGATG	7 cut(s)	198, 668, 672, 1073, 1388, 1715, 2320
FriOI	GRGCYC	2 cut(s)	111, 1057
FseI	GGCCGGCC	1 cut(s)	447
Fsp4HI	GCNGC	3 cut(s)	308, 1024, 1298
FspBI	CTAG	5 cut(s)	233, 795, 1187, 1322, 2268
GlaI	GCGC	2 cut(s)	1194, 1472
GluI	GCNGC	3 cut(s)	308, 1024, 1298
GsuI	CTGGAG	2 cut(s)	4, 1177
HaeII	RGCGCY	1 cut(s)	1196
HaeIII	GGCC	7 cut(s)	35, 41, 443, 447, 568, 1036, 1061
HapII	CCGG	6 cut(s)	255, 328, 444, 572, 995, 1058
HgaI	GACGC	2 cut(s)	532, 1006
HhaI	GCGC	2 cut(s)	1195, 1473
Hin6I	GCGC	2 cut(s)	1193, 1471
HinP1I	GCGC	2 cut(s)	1193, 1471
HincII	GTYRAC	5 cut(s)	534, 1171, 1540, 1736, 2279
HindII	GTYRAC	5 cut(s)	534, 1171, 1540, 1736, 2279
HindIII	AAGCTT	4 cut(s)	227, 725, 957, 2062
HinfI	GANTC	8 cut(s)	84, 146, 324, 461, 761, 1065, 2014, 2104
HpaII	CCGG	6 cut(s)	255, 328, 444, 572, 995, 1058
HphI	GGTGA	4 cut(s)	1469, 1922, 2129, 2314
Hpy166II	GTNNAC	7 cut(s)	534, 622, 1171, 1540, 1736, 2099, 2279
Hpy188I	TCNGA	8 cut(s)	93, 336, 520, 669, 1234, 1858, 2109, 2348
Hpy8I	GTNNAC	7 cut(s)	534, 622, 1171, 1540, 1736, 2099, 2279
Hpy99I	CGWCG	2 cut(s)	1022, 1145
HpyAV	CCTTC	7 cut(s)	367, 699, 703, 1355, 2138, 2226, 2308
HpyCH4III	ACNGT	4 cut(s)	127, 1733, 1840, 2212
HpyCH4IV	ACGT	5 cut(s)	238, 1132, 2095, 2193, 2351
HpyF10VI	GCNNNNNNNGC	6 cut(s)	316, 409, 599, 956, 1023, 1192
HpyF3I	CTNAG	8 cut(s)	105, 517, 824, 1233, 1811, 1979, 2045, 2296
HpySE526I	ACGT	5 cut(s)	238, 1132, 2095, 2193, 2351
HspAI	GCGC	2 cut(s)	1193, 1471
KroI	GCCGGC	1 cut(s)	443
KroNI	GCCGGC	1 cut(s)	445
Ksp22I	TGATCA	3 cut(s)	1414, 1798, 1858
Kzo9I	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
LmnI	GCTCC	4 cut(s)	28, 210, 1060, 1335
Lsp1109I	GCAGC	3 cut(s)	294, 1035, 1309
LweI	GCATC	7 cut(s)	376, 602, 662, 1309, 1672, 2044, 2066
MaeI	CTAG	5 cut(s)	233, 795, 1187, 1322, 2268
MaeII	ACGT	5 cut(s)	238, 1132, 2095, 2193, 2351
MaeIII	GTNAC	3 cut(s)	699, 1667, 1774
MalI	GATC	8 cut(s)	333, 912, 1008, 1416, 1677, 1800, 1860, 1948
MboI	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
MboII	GAAGA	9 cut(s)	7, 376, 944, 1042, 1093, 1111, 1441, 1812, 2323
MfeI	CAATTG	1 cut(s)	2253
MflI	RGATCY	2 cut(s)	331, 1006
MhlI	GDGCHC	5 cut(s)	111, 1057, 1256, 1340, 1643
MlsI	TGGCCA	1 cut(s)	35
MluCI	AATT	4 cut(s)	466, 1330, 1874, 2253
MluNI	TGGCCA	1 cut(s)	35
MlyI	GAGTC	4 cut(s)	140, 333, 455, 2023
MmeI	TCCRAC	2 cut(s)	489, 624
Mox20I	TGGCCA	1 cut(s)	35
Mph1103I	ATGCAT	5 cut(s)	157, 1595, 1664, 1764, 2059
MroNI	GCCGGC	1 cut(s)	443
MroXI	GAANNNNTTC	1 cut(s)	2236
MscI	TGGCCA	1 cut(s)	35
MseI	TTAA	4 cut(s)	393, 785, 1755, 1877
MslI	CAYNNNNRTG	4 cut(s)	746, 945, 1370, 1783
Msp20I	TGGCCA	1 cut(s)	35
MspA1I	CMGCKG	3 cut(s)	319, 1864, 1936
MspI	CCGG	6 cut(s)	255, 328, 444, 572, 995, 1058
MspR9I	CCNGG	4 cut(s)	22, 329, 995, 1156
MunI	CAATTG	1 cut(s)	2253
Mva1269I	GAATGC	1 cut(s)	2262
MvaI	CCWGG	2 cut(s)	22, 1156
MvnI	CGCG	2 cut(s)	1017, 1633
MwoI	GCNNNNNNNGC	6 cut(s)	316, 409, 599, 956, 1023, 1192
NaeI	GCCGGC	1 cut(s)	445
NciI	CCSGG	2 cut(s)	329, 995
NcoI	CCATGG	1 cut(s)	675
NdeI	CATATG	2 cut(s)	1369, 1595
NdeII	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
NgoMIV	GCCGGC	1 cut(s)	443
NlaIV	GGNNCC	6 cut(s)	333, 513, 1008, 1253, 1642, 1976
NmuCI	GTSAC	1 cut(s)	1774
NsiI	ATGCAT	5 cut(s)	157, 1595, 1664, 1764, 2059
NspI	RCATGY	6 cut(s)	247, 745, 1666, 1729, 1766, 1782
OliI	CACNNNNGTG	1 cut(s)	1370
PaeI	GCATGC	2 cut(s)	1666, 1766
PciI	ACATGT	1 cut(s)	1725
PcsI	WCGNNNNNNNCGW	1 cut(s)	1119
PctI	GAATGC	1 cut(s)	2262
PdiI	GCCGGC	1 cut(s)	445
PdmI	GAANNNNTTC	1 cut(s)	2236
PfeI	GAWTC	4 cut(s)	84, 761, 1065, 2104
PfoI	TCCNGGA	1 cut(s)	327
PkrI	GCNGC	3 cut(s)	309, 1025, 1299
PleI	GAGTC	4 cut(s)	140, 332, 455, 2022
PpsI	GAGTC	4 cut(s)	140, 332, 455, 2022
Ppu21I	YACGTR	2 cut(s)	2096, 2194
PpuMI	RGGWCCY	1 cut(s)	1975
PscI	ACATGT	1 cut(s)	1725
Psp124BI	GAGCTC	2 cut(s)	111, 1057
Psp5II	RGGWCCY	1 cut(s)	1975
Psp6I	CCWGG	2 cut(s)	20, 1154
PspGI	CCWGG	2 cut(s)	20, 1154
PspN4I	GGNNCC	6 cut(s)	333, 513, 1008, 1253, 1642, 1976
PspPI	GGNCC	4 cut(s)	89, 1242, 1769, 1975
PspPPI	RGGWCCY	1 cut(s)	1975
PstI	CTGCAG	1 cut(s)	1299
PstNI	CAGNNNCTG	1 cut(s)	31
PsuI	RGATCY	2 cut(s)	331, 1006
PvuII	CAGCTG	1 cut(s)	1936
RigI	GGCCGGCC	1 cut(s)	447
RsaI	GTAC	3 cut(s)	876, 1730, 2342
RsaNI	GTAC	3 cut(s)	875, 1729, 2341
RseI	CAYNNNNRTG	4 cut(s)	746, 945, 1370, 1783
Rsr2I	CGGWCCG	1 cut(s)	89
RsrII	CGGWCCG	1 cut(s)	89
SacI	GAGCTC	2 cut(s)	111, 1057
SalI	GTCGAC	1 cut(s)	2277
SaqAI	TTAA	4 cut(s)	393, 785, 1755, 1877
SatI	GCNGC	3 cut(s)	308, 1024, 1298
Sau3AI	GATC	8 cut(s)	331, 910, 1006, 1414, 1675, 1798, 1858, 1946
Sau96I	GGNCC	4 cut(s)	89, 1242, 1769, 1975
SchI	GAGTC	4 cut(s)	140, 333, 455, 2023
ScrFI	CCNGG	4 cut(s)	22, 329, 995, 1156
SduI	GDGCHC	5 cut(s)	111, 1057, 1256, 1340, 1643
SfaNI	GCATC	7 cut(s)	376, 602, 662, 1309, 1672, 2044, 2066
SfcI	CTRYAG	2 cut(s)	1295, 1350
SinI	GGWCC	4 cut(s)	89, 1242, 1769, 1975
SmiMI	CAYNNNNRTG	4 cut(s)	746, 945, 1370, 1783
SmlI	CTYRAG	2 cut(s)	954, 1048
SmoI	CTYRAG	2 cut(s)	954, 1048
SnaBI	TACGTA	1 cut(s)	2096
SphI	GCATGC	2 cut(s)	1666, 1766
Sse9I	AATT	4 cut(s)	466, 1330, 1874, 2253
SsiI	CCGC	6 cut(s)	208, 319, 998, 1603, 1815, 1864
SspI	AATATT	2 cut(s)	140, 398
SspMI	CTAG	5 cut(s)	233, 795, 1187, 1322, 2268
SstI	GAGCTC	2 cut(s)	111, 1057
StyD4I	CCNGG	4 cut(s)	20, 327, 993, 1154
StyI	CCWWGG	3 cut(s)	36, 347, 675
TaaI	ACNGT	4 cut(s)	127, 1733, 1840, 2212
TaiI	ACGT	5 cut(s)	241, 1135, 2098, 2196, 2354
TaqI	TCGA	8 cut(s)	282, 502, 1077, 1113, 1122, 1327, 1359, 2278
TaqII	GACCGA	1 cut(s)	77
TasI	AATT	4 cut(s)	466, 1330, 1874, 2253
TatI	WGTACW	3 cut(s)	874, 1728, 2340
TfiI	GAWTC	4 cut(s)	84, 761, 1065, 2104
Tru1I	TTAA	4 cut(s)	393, 785, 1755, 1877
Tru9I	TTAA	4 cut(s)	393, 785, 1755, 1877
TscAI	CASTG	4 cut(s)	1252, 1424, 1779, 2215
TseFI	GTSAC	1 cut(s)	1774
TseI	GCWGC	3 cut(s)	307, 1023, 1297
Tsp45I	GTSAC	1 cut(s)	1774
TspDTI	ATGAA	5 cut(s)	167, 268, 377, 903, 2324
TspGWI	ACGGA	1 cut(s)	1129
TspRI	CASTG	4 cut(s)	1252, 1424, 1779, 2215
VpaK11BI	GGWCC	4 cut(s)	89, 1242, 1769, 1975
XceI	RCATGY	6 cut(s)	247, 745, 1666, 1729, 1766, 1782
XcmI	CCANNNNNNNNNTGG	2 cut(s)	28, 1940
XmiI	GTMKAC	3 cut(s)	621, 2098, 2278
XmnI	GAANNNNTTC	1 cut(s)	2236
XspI	CTAG	5 cut(s)	233, 795, 1187, 1322, 2268
Zsp2I	ATGCAT	5 cut(s)	157, 1595, 1664, 1764, 2059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.