Rmu_sc0004206.1_g000015

ELMO domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004206.1
Physical Location & Seq
Forward (+)
50559 .. 57679
7121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004206.1_g000015.1.cds

Sequence Viewer

Length: 1707 bp
atgaaagagtcaaatagaaaggaggtcgaagcccagaccgagtctccactaacccagatacccgtgatggagaccgggccatttctccgtccttcggccatgaatcggcggcggactggtggcgttagctttgtcttgatgtcgctgtcaaatcgtggccgcttaccggtgtcgaagctttctctcgtccttgacgacttatccgtggcgttcgttgtccagataataagttttgagggagaatcgaagaagataacttttctaagtttcccggcgatttgccatgttttccggaaactgactggtttcattgccattgatagagggagactccacactccttccctaaacaaacttttttcattctcagaacacataatgtcttcttcttctttctctatcaatcttgctccctcccatttcttgaagtgggccccgccgtcaaaccaccaccatcatcatcaccaacaacaccaccacccaagccaacatgtttcctcagttgccatagcaggtaatcctcctacggttgatgaggatgagatttattggacacagaagagcaaaagcagtaaggagcaacgtggttcaactcgtgtgataccacagtcagttcaatgttttattaatgctatggttggaccacgatcatggacaggactgtttagccgctcaagcaacaaacgtaatgggaagtatgttgactaccctttgagtcctatgcaggagcagagacttttggggcttcaagaacgactacaagtaccttttgacgagactcgccctgatcatcaagaagccttgaaagcactctggtatgctgcctttccagatgttgctatcagtggtttgatctctgagcaatggaaagagatggggtggcaaggtcctaacccatctactgactttaggagttgcggtgttattgcccttgagaacttgcttttcttcgccagaacttatcctgcatctttccggagattattgttcaagcaaggtgggagacgagcaacttgggaatacccatttgctgttgctggcataaacatatcatttatgttgattcaattgctggatctttggtcagaagatgaagctgcttttgatgtactattctgtatagcttttgaaatggtggatgctcaatggcttgctatgaatgcatcctacatgcagtttaatggcgtagccactcataaggctacttgggctatagcccaagggagaatttcgcccaaaatgcgtcaagtatggaacttcagatcggttccgccttccactcttccagagttccagcttccaacttccaggctccagccacggagccacctccaaggctccaatcgctgcgagccacagagccacctccaatctcagagtttcagtccaccgagtcacctcctactctcactctcctcgtctccccgttcagaacttcagttcaattttgattcccccttccagagttccaggctccaggctccagccaccgtgcctgcgtcaagtatggaacttcagatcggttccgccttccactcttccagagttccagcttccaacttccaggctccagccacggagccacctccaaggctccaatcgctgcgagccacagagccacctccaatctcagagtttcagtccaccgagtcacctcctactctcactctcctcgtctccccgttcagaacttcagttcaattttga

Protein Analysis

568

Amino Acids

63.9

Weight (kDa)

9.34

Isoelectric Point (pI)

69.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 503
AccBSI CCGCTC 1 cut(s) 672
AccIII TCCGGA 2 cut(s) 291, 975
AciI CCGC 8 cut(s) 109, 112, 160, 437, 670, 918, 1271, 1527
AclWI GGATC 1 cut(s) 1083
AcoI YGGCCR 2 cut(s) 96, 157
AcsI RAATTY 1 cut(s) 1227
AcuI CTGAAG 4 cut(s) 1243, 1421, 1499, 1677
AfaI GTAC 2 cut(s) 765, 1110
AfiI CCNNNNNNNGG 3 cut(s) 94, 105, 166
AflIII ACRYGT 1 cut(s) 490
AgeI ACCGGT 1 cut(s) 166
AjnI CCWGG 4 cut(s) 1307, 1469, 1476, 1563
AluBI AGCT 6 cut(s) 129, 178, 1097, 1124, 1297, 1553
AluI AGCT 6 cut(s) 129, 178, 1097, 1124, 1297, 1553
Alw26I GTCTC 8 cut(s) 48, 65, 322, 727, 770, 997, 1425, 1681
AlwI GGATC 1 cut(s) 1083
Aor13HI TCCGGA 2 cut(s) 291, 975
AoxI GGCC 4 cut(s) 77, 96, 157, 432
ApaI GGGCCC 1 cut(s) 436
ApeKI GCWGC 4 cut(s) 821, 1097, 1347, 1603
ApoI RAATTY 1 cut(s) 1227
AseI ATTAAT 1 cut(s) 627
AsiGI ACCGGT 1 cut(s) 166
AspS9I GGNCC 5 cut(s) 77, 432, 433, 641, 887
AsuC2I CCSGG 2 cut(s) 76, 272
AsuHPI GGTGA 3 cut(s) 455, 1388, 1644
AvaII GGWCC 2 cut(s) 641, 887
BaeGI GKGCMC 1 cut(s) 436
BaeI ACNNNNGTAYC 2 cut(s) 593, 626
BanII GRGCYC 1 cut(s) 436
BauI CACGAG 1 cut(s) 594
BbsI GAAGAC 1 cut(s) 375
BbvI GCAGC 4 cut(s) 808, 1084, 1334, 1590
BccI CCATC 4 cut(s) 61, 462, 868, 904
BceAI ACGGC 1 cut(s) 424
BciT130I CCWGG 4 cut(s) 1309, 1471, 1478, 1565
BclI TGATCA 1 cut(s) 787
BcnI CCSGG 2 cut(s) 76, 272
BcoDI GTCTC 8 cut(s) 48, 65, 322, 727, 770, 997, 1425, 1681
BfmI CTRYAG 1 cut(s) 1212
BfuAI ACCTGC 1 cut(s) 503
BisI GCNGC 7 cut(s) 110, 160, 670, 822, 1098, 1348, 1604
BlsI GCNGC 7 cut(s) 111, 161, 671, 823, 1099, 1349, 1605
Bme1390I CCNGG 6 cut(s) 76, 272, 1309, 1471, 1478, 1565
Bme18I GGWCC 2 cut(s) 641, 887
BmgT120I GGNCC 5 cut(s) 77, 432, 433, 641, 887
BmrFI CCNGG 6 cut(s) 76, 272, 1309, 1471, 1478, 1565
BmsI GCATC 3 cut(s) 977, 1129, 1172
BpiI GAAGAC 1 cut(s) 375
BplI GAGNNNNNCTC 2 cut(s) 315, 347
BpmI CTGGAG 4 cut(s) 1298, 1460, 1467, 1554
BpuEI CTTGAG 2 cut(s) 658, 953
BpuMI CCSGG 2 cut(s) 76, 272
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 6 cut(s) 204, 1219, 1319, 1333, 1575, 1589
BsaWI WCCGGW 3 cut(s) 166, 291, 975
BsaXI ACNNNNNCTCC 4 cut(s) 28, 58, 904, 934
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 105, 166
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 2 cut(s) 121, 307
Bse3DI GCAATG 2 cut(s) 309, 869
BseAI TCCGGA 2 cut(s) 291, 975
BseBI CCWGG 4 cut(s) 1309, 1471, 1478, 1565
BseDI CCNNGG 6 cut(s) 204, 1219, 1319, 1333, 1575, 1589
BseGI GGATG 3 cut(s) 544, 1144, 1163
BseLI CCNNNNNNNGG 3 cut(s) 94, 105, 166
BseMI GCAATG 2 cut(s) 309, 869
BseMII CTCAG 5 cut(s) 381, 513, 849, 1388, 1644
BseNI ACTGG 2 cut(s) 121, 307
BseRI GAGGAG 2 cut(s) 1405, 1661
BseSI GKGCMC 1 cut(s) 436
BseXI GCAGC 4 cut(s) 808, 1084, 1334, 1590
BshFI GGCC 4 cut(s) 79, 98, 159, 434
BshTI ACCGGT 1 cut(s) 166
BsiSI CCGG 5 cut(s) 75, 167, 272, 292, 976
BslI CCNNNNNNNGG 3 cut(s) 94, 105, 166
BsmAI GTCTC 8 cut(s) 48, 65, 322, 727, 770, 997, 1425, 1681
BsmBI CGTCTC 3 cut(s) 997, 1425, 1681
BsmI GAATGC 1 cut(s) 1165
BsnI GGCC 4 cut(s) 79, 98, 159, 434
Bso31I GGTCTC 1 cut(s) 65
Bsp120I GGGCCC 1 cut(s) 432
Bsp1286I GDGCHC 1 cut(s) 436
Bsp13I TCCGGA 2 cut(s) 291, 975
Bsp143I GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
BspACI CCGC 8 cut(s) 109, 112, 160, 437, 670, 918, 1271, 1527
BspANI GGCC 4 cut(s) 79, 98, 159, 434
BspCNI CTCAG 5 cut(s) 380, 512, 850, 1387, 1643
BspEI TCCGGA 2 cut(s) 291, 975
BspMI ACCTGC 1 cut(s) 503
BspPI GGATC 1 cut(s) 1083
BspQI GCTCTTC 1 cut(s) 554
BspTNI GGTCTC 1 cut(s) 65
BsrBI CCGCTC 1 cut(s) 672
BsrDI GCAATG 2 cut(s) 309, 869
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 2 cut(s) 121, 307
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 6 cut(s) 204, 1219, 1319, 1333, 1575, 1589
BssMI GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
BssSI CACGAG 1 cut(s) 594
BssT1I CCWWGG 3 cut(s) 1219, 1333, 1589
Bst2BI CACGAG 1 cut(s) 594
Bst2UI CCWGG 4 cut(s) 1309, 1471, 1478, 1565
Bst4CI ACNGT 4 cut(s) 529, 609, 663, 1492
Bst6I CTCTTC 3 cut(s) 554, 1287, 1543
BstC8I GCNNGC 5 cut(s) 1039, 1152, 1352, 1497, 1608
BstDEI CTNAG 6 cut(s) 263, 367, 499, 858, 1374, 1630
BstDSI CCRYGG 3 cut(s) 204, 1319, 1575
BstF5I GGATG 3 cut(s) 544, 1144, 1163
BstKTI GATC 6 cut(s) 650, 790, 855, 1078, 1265, 1521
BstMAI GTCTC 8 cut(s) 48, 65, 322, 727, 770, 997, 1425, 1681
BstMBI GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
BstMWI GCNNNNNNNGC 7 cut(s) 675, 806, 1160, 1208, 1240, 1344, 1600
BstNI CCWGG 4 cut(s) 1309, 1471, 1478, 1565
BstNSI RCATGY 2 cut(s) 494, 1174
BstSCI CCNGG 6 cut(s) 74, 270, 1307, 1469, 1476, 1563
BstSFI CTRYAG 1 cut(s) 1212
BstSLI GKGCMC 1 cut(s) 436
BstV1I GCAGC 4 cut(s) 808, 1084, 1334, 1590
BstV2I GAAGAC 1 cut(s) 375
BstX2I RGATCY 1 cut(s) 1075
BstXI CCANNNNNNTGG 1 cut(s) 651
BstYI RGATCY 1 cut(s) 1075
BsuRI GGCC 4 cut(s) 79, 98, 159, 434
BtgI CCRYGG 3 cut(s) 204, 1319, 1575
BtsCI GGATG 3 cut(s) 544, 1144, 1163
BtsIMutI CAGTG 1 cut(s) 850
BveI ACCTGC 1 cut(s) 503
Cac8I GCNNGC 5 cut(s) 1039, 1152, 1352, 1497, 1608
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 5 cut(s) 77, 432, 433, 641, 887
CseI GACGC 2 cut(s) 1232, 1488
Csp6I GTAC 2 cut(s) 764, 1109
CspAI ACCGGT 1 cut(s) 166
CspCI CAANNNNNGTGG 2 cut(s) 979, 1014
CviAII CATG 5 cut(s) 100, 284, 491, 651, 1171
CviQI GTAC 2 cut(s) 764, 1109
DdeI CTNAG 6 cut(s) 263, 367, 499, 858, 1374, 1630
DpnI GATC 6 cut(s) 649, 789, 854, 1077, 1264, 1520
DpnII GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
EaeI YGGCCR 2 cut(s) 96, 157
Eam1104I CTCTTC 3 cut(s) 554, 1287, 1543
EarI CTCTTC 3 cut(s) 554, 1287, 1543
EciI GGCGGA 3 cut(s) 127, 1260, 1516
Eco130I CCWWGG 3 cut(s) 1219, 1333, 1589
Eco24I GRGCYC 1 cut(s) 436
Eco31I GGTCTC 1 cut(s) 65
Eco47I GGWCC 2 cut(s) 641, 887
Eco57I CTGAAG 4 cut(s) 1243, 1421, 1499, 1677
EcoO109I RGGNCCY 2 cut(s) 433, 887
EcoRII CCWGG 4 cut(s) 1307, 1469, 1476, 1563
EcoT14I CCWWGG 3 cut(s) 1219, 1333, 1589
EcoT22I ATGCAT 1 cut(s) 1165
EcoT38I GRGCYC 1 cut(s) 436
ErhI CCWWGG 3 cut(s) 1219, 1333, 1589
Esp3I CGTCTC 3 cut(s) 997, 1425, 1681
FaeI CATG 5 cut(s) 103, 287, 494, 654, 1174
FatI CATG 5 cut(s) 99, 283, 490, 650, 1170
FauI CCCGC 1 cut(s) 444
FbaI TGATCA 1 cut(s) 787
Fnu4HI GCNGC 7 cut(s) 110, 160, 670, 822, 1098, 1348, 1604
FokI GGATG 3 cut(s) 551, 1150, 1151
FriOI GRGCYC 1 cut(s) 436
Fsp4HI GCNGC 7 cut(s) 110, 160, 670, 822, 1098, 1348, 1604
GluI GCNGC 7 cut(s) 110, 160, 670, 822, 1098, 1348, 1604
GsuI CTGGAG 4 cut(s) 1298, 1460, 1467, 1554
HaeIII GGCC 4 cut(s) 79, 98, 159, 434
HapII CCGG 5 cut(s) 75, 167, 272, 292, 976
HgaI GACGC 2 cut(s) 1232, 1488
Hin1II CATG 5 cut(s) 103, 287, 494, 654, 1174
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HindIII AAGCTT 1 cut(s) 176
HpaII CCGG 5 cut(s) 75, 167, 272, 292, 976
HphI GGTGA 3 cut(s) 455, 1388, 1644
Hpy166II GTNNAC 3 cut(s) 703, 1388, 1644
Hpy188I TCNGA 9 cut(s) 370, 859, 1087, 1262, 1377, 1432, 1518, 1633, 1688
Hpy8I GTNNAC 3 cut(s) 703, 1388, 1644
HpyAV CCTTC 5 cut(s) 102, 351, 1284, 1468, 1540
HpyCH4III ACNGT 4 cut(s) 529, 609, 663, 1492
HpyCH4IV ACGT 2 cut(s) 583, 685
HpyCH4V TGCA 4 cut(s) 724, 968, 1163, 1174
HpyF10VI GCNNNNNNNGC 7 cut(s) 675, 806, 1160, 1208, 1240, 1344, 1600
HpyF3I CTNAG 6 cut(s) 263, 367, 499, 858, 1374, 1630
HpySE526I ACGT 2 cut(s) 583, 685
Hsp92II CATG 5 cut(s) 103, 287, 494, 654, 1174
Kpn2I TCCGGA 2 cut(s) 291, 975
Ksp22I TGATCA 1 cut(s) 787
Kzo9I GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
LguI GCTCTTC 1 cut(s) 554
Lsp1109I GCAGC 4 cut(s) 808, 1084, 1334, 1590
LweI GCATC 3 cut(s) 977, 1129, 1172
MaeII ACGT 2 cut(s) 583, 685
MaeIII GTNAC 2 cut(s) 1394, 1650
MalI GATC 6 cut(s) 649, 789, 854, 1077, 1264, 1520
MbiI CCGCTC 1 cut(s) 672
MboI GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
MfeI CAATTG 1 cut(s) 1067
MflI RGATCY 1 cut(s) 1075
MhlI GDGCHC 1 cut(s) 436
MluCI AATT 4 cut(s) 1067, 1227, 1444, 1700
MlyI GAGTC 7 cut(s) 17, 50, 324, 724, 772, 1402, 1658
MmeI TCCRAC 3 cut(s) 619, 1325, 1581
Mph1103I ATGCAT 1 cut(s) 1165
MroI TCCGGA 2 cut(s) 291, 975
MseI TTAA 2 cut(s) 627, 1179
MslI CAYNNNNRTG 1 cut(s) 649
MspI CCGG 5 cut(s) 75, 167, 272, 292, 976
MspR9I CCNGG 6 cut(s) 76, 272, 1309, 1471, 1478, 1565
MunI CAATTG 1 cut(s) 1067
Mva1269I GAATGC 1 cut(s) 1165
MvaI CCWGG 4 cut(s) 1309, 1471, 1478, 1565
MwoI GCNNNNNNNGC 7 cut(s) 675, 806, 1160, 1208, 1240, 1344, 1600
NciI CCSGG 2 cut(s) 76, 272
NdeII GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
NlaIII CATG 5 cut(s) 103, 287, 494, 654, 1174
NmuCI GTSAC 2 cut(s) 1394, 1650
NsiI ATGCAT 1 cut(s) 1165
NspI RCATGY 2 cut(s) 494, 1174
PciI ACATGT 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 554
PcsI WCGNNNNNNNCGW 2 cut(s) 192, 201
PctI GAATGC 1 cut(s) 1165
PfeI GAWTC 4 cut(s) 103, 242, 1063, 1451
PflFI GACNNNGTC 1 cut(s) 40
PinAI ACCGGT 1 cut(s) 166
PkrI GCNGC 7 cut(s) 111, 161, 671, 823, 1099, 1349, 1605
PleI GAGTC 7 cut(s) 16, 49, 324, 723, 772, 1401, 1657
PpsI GAGTC 7 cut(s) 16, 49, 324, 723, 772, 1401, 1657
PpuMI RGGWCCY 1 cut(s) 887
PscI ACATGT 1 cut(s) 490
PshBI ATTAAT 1 cut(s) 627
Psp5II RGGWCCY 1 cut(s) 887
Psp6I CCWGG 4 cut(s) 1307, 1469, 1476, 1563
PspGI CCWGG 4 cut(s) 1307, 1469, 1476, 1563
PspOMI GGGCCC 1 cut(s) 432
PspPI GGNCC 5 cut(s) 77, 432, 433, 641, 887
PspPPI RGGWCCY 1 cut(s) 887
PsuI RGATCY 1 cut(s) 1075
PsyI GACNNNGTC 1 cut(s) 40
RsaI GTAC 2 cut(s) 765, 1110
RsaNI GTAC 2 cut(s) 764, 1109
RseI CAYNNNNRTG 1 cut(s) 649
SapI GCTCTTC 1 cut(s) 554
SaqAI TTAA 2 cut(s) 627, 1179
SatI GCNGC 7 cut(s) 110, 160, 670, 822, 1098, 1348, 1604
Sau3AI GATC 6 cut(s) 647, 787, 852, 1075, 1262, 1518
Sau96I GGNCC 5 cut(s) 77, 432, 433, 641, 887
SchI GAGTC 7 cut(s) 17, 50, 324, 724, 772, 1402, 1658
ScrFI CCNGG 6 cut(s) 76, 272, 1309, 1471, 1478, 1565
SduI GDGCHC 1 cut(s) 436
SfaNI GCATC 3 cut(s) 977, 1129, 1172
SfcI CTRYAG 1 cut(s) 1212
SinI GGWCC 2 cut(s) 641, 887
SmiMI CAYNNNNRTG 1 cut(s) 649
SmlI CTYRAG 2 cut(s) 673, 932
SmoI CTYRAG 2 cut(s) 673, 932
Sse9I AATT 4 cut(s) 1067, 1227, 1444, 1700
SsiI CCGC 8 cut(s) 109, 112, 160, 437, 670, 918, 1271, 1527
StyD4I CCNGG 6 cut(s) 74, 270, 1307, 1469, 1476, 1563
StyI CCWWGG 3 cut(s) 1219, 1333, 1589
TaaI ACNGT 4 cut(s) 529, 609, 663, 1492
TaiI ACGT 2 cut(s) 586, 688
TaqI TCGA 3 cut(s) 27, 173, 245
TaqII GACCGA 1 cut(s) 53
TasI AATT 4 cut(s) 1067, 1227, 1444, 1700
TatI WGTACW 1 cut(s) 1108
TauI GCSGC 3 cut(s) 112, 162, 672
TfiI GAWTC 4 cut(s) 103, 242, 1063, 1451
Tru1I TTAA 2 cut(s) 627, 1179
Tru9I TTAA 2 cut(s) 627, 1179
TscAI CASTG 1 cut(s) 850
TseFI GTSAC 2 cut(s) 1394, 1650
TseI GCWGC 4 cut(s) 821, 1097, 1347, 1603
Tsp45I GTSAC 2 cut(s) 1394, 1650
TspDTI ATGAA 6 cut(s) 17, 116, 298, 351, 1107, 1172
TspGWI ACGGA 4 cut(s) 77, 193, 1336, 1592
TspRI CASTG 1 cut(s) 850
Tth111I GACNNNGTC 1 cut(s) 40
VpaK11BI GGWCC 2 cut(s) 641, 887
VspI ATTAAT 1 cut(s) 627
XapI RAATTY 1 cut(s) 1227
XceI RCATGY 2 cut(s) 494, 1174
Zsp2I ATGCAT 1 cut(s) 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.