Rmu_sc0004226.1_g000018

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004226.1
OG0003060
Physical Location & Seq
Forward (+)
56092 .. 57088
997 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 801 bp
atgtacttccccaccatccatgcagcccaaattggccgggactatagtaacatcggagacaaggtttgtatccctggttggaagcccttgtggcttgacgatctcgtccttgaacttttgatcccccaactgttgaatctatctaatcgtgtcccggtgctcaatggcgttttggtcaacacatgggaggagttggagccagtgacgctcagtgcatttaaagagaaccctttctttcttcgtacgtgtaccatctcctcaaacatatccgattgcggagggactctgtcggctgagcagatgactgagttggccttcgggttggaactaagtgggaaacgattcctttgggtggctcggcctcctagtcaagctaatgcatccgcaagcttcttcgaaactggctgtgatgatgcccgagatccggatcatccatcggtggccgggtttgtgactcactgcggatggaactctgtactggagagcattgttcatggcttggcgatgattacttggccgctctacgccgagcagaaaatgaatgcgacaatgttggtggatgaaggggtggctgtgaggataaagaagcttcaggttgagcaagatgggaagaggattgcggggcgtcgtgaaatcgagacggcggtgaggatggttatggagggtgaggaaggaaagaggatgaggcagagggtcagagagcttcagagcagtgctgtgagtgcattgagtcatgatgggttgtctagtggatgtctcactcgcctgggaaacaaatggcttgacggaggcacggtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

266

Amino Acids

29.39

Weight (kDa)

5.46

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 97 - 224 1e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 104
AccBSI CCGCTC 1 cut(s) 520
AccIII TCCGGA 1 cut(s) 424
AciI CCGC 6 cut(s) 276, 384, 462, 518, 620, 644
AclWI GGATC 3 cut(s) 115, 416, 435
AcoI YGGCCR 3 cut(s) 34, 441, 515
AcuI CTGAAG 2 cut(s) 575, 689
AcyI GRCGYC 1 cut(s) 625
AfaI GTAC 4 cut(s) 5, 244, 250, 477
AfiI CCNNNNNNNGG 2 cut(s) 352, 424
AflIII ACRYGT 1 cut(s) 245
AgsI TTSAA 2 cut(s) 113, 136
AjnI CCWGG 2 cut(s) 73, 765
AloI GAACNNNNNNTCC 2 cut(s) 105, 137
AluBI AGCT 4 cut(s) 374, 390, 589, 703
AluI AGCT 4 cut(s) 374, 390, 589, 703
Alw21I GWGCWC 1 cut(s) 162
Alw26I GTCTC 3 cut(s) 51, 632, 761
AlwI GGATC 3 cut(s) 115, 416, 435
Ama87I CYCGRG 1 cut(s) 417
Aor13HI TCCGGA 1 cut(s) 424
AoxI GGCC 5 cut(s) 34, 312, 359, 441, 515
ApeKI GCWGC 1 cut(s) 23
Asp700I GAANNNNTTC 2 cut(s) 230, 341
AsuC2I CCSGG 3 cut(s) 38, 155, 445
AsuHPI GGTGA 2 cut(s) 658, 677
AsuII TTCGAA 1 cut(s) 396
AvaI CYCGRG 1 cut(s) 417
Bbv12I GWGCWC 1 cut(s) 162
BbvI GCAGC 1 cut(s) 35
BccI CCATC 7 cut(s) 23, 260, 442, 459, 599, 646, 731
BceAI ACGGC 1 cut(s) 657
BciT130I CCWGG 2 cut(s) 75, 767
BciVI GTATCC 1 cut(s) 80
BcnI CCSGG 3 cut(s) 38, 155, 445
BcoDI GTCTC 3 cut(s) 51, 632, 761
BfaI CTAG 2 cut(s) 366, 747
BfmI CTRYAG 1 cut(s) 43
BfuI GTATCC 1 cut(s) 80
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 2 cut(s) 24, 518
BlpI GCTNAGC 1 cut(s) 294
BlsI GCNGC 2 cut(s) 25, 519
Bme1390I CCNGG 5 cut(s) 38, 75, 155, 445, 767
BmeT110I CYCGRG 1 cut(s) 417
BmiI GGNNCC 1 cut(s) 198
BmrFI CCNGG 5 cut(s) 38, 75, 155, 445, 767
BmsI GCATC 2 cut(s) 389, 403
BpmI CTGGAG 1 cut(s) 500
Bpu1102I GCTNAGC 1 cut(s) 294
Bpu14I TTCGAA 1 cut(s) 396
BpuMI CCSGG 3 cut(s) 38, 155, 445
BsaAI YACGTR 1 cut(s) 246
BsaBI GATNNNNATC 1 cut(s) 426
BsaHI GRCGYC 1 cut(s) 625
BsaJI CCNNGG 2 cut(s) 73, 766
BsaWI WCCGGW 1 cut(s) 424
BsaXI ACNNNNNCTCC 3 cut(s) 48, 78, 780
Bsc4I CCNNNNNNNGG 2 cut(s) 352, 424
Bse1I ACTGG 3 cut(s) 200, 406, 483
Bse8I GATNNNNATC 1 cut(s) 426
BseAI TCCGGA 1 cut(s) 424
BseBI CCWGG 2 cut(s) 75, 767
BseDI CCNNGG 2 cut(s) 73, 766
BseGI GGATG 8 cut(s) 15, 380, 430, 470, 565, 657, 687, 758
BseJI GATNNNNATC 1 cut(s) 426
BseLI CCNNNNNNNGG 2 cut(s) 352, 424
BseMII CTCAG 3 cut(s) 223, 285, 297
BseNI ACTGG 3 cut(s) 200, 406, 483
BseRI GAGGAG 2 cut(s) 203, 247
BseXI GCAGC 1 cut(s) 35
BshFI GGCC 5 cut(s) 36, 314, 361, 443, 517
BsiHKAI GWGCWC 1 cut(s) 162
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 4 cut(s) 37, 155, 425, 444
BsiWI CGTACG 1 cut(s) 242
BslFI GGGAC 3 cut(s) 53, 137, 295
BslI CCNNNNNNNGG 2 cut(s) 352, 424
BsmAI GTCTC 3 cut(s) 51, 632, 761
BsmBI CGTCTC 1 cut(s) 632
BsmFI GGGAC 3 cut(s) 53, 137, 295
BsmI GAATGC 1 cut(s) 547
BsnI GGCC 5 cut(s) 36, 314, 361, 443, 517
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 1 cut(s) 396
Bsp1286I GDGCHC 1 cut(s) 162
Bsp13I TCCGGA 1 cut(s) 424
Bsp143I GATC 4 cut(s) 100, 120, 421, 427
Bsp1720I GCTNAGC 1 cut(s) 294
BspACI CCGC 6 cut(s) 276, 384, 462, 518, 620, 644
BspANI GGCC 5 cut(s) 36, 314, 361, 443, 517
BspCNI CTCAG 3 cut(s) 222, 286, 298
BspEI TCCGGA 1 cut(s) 424
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 1 cut(s) 198
BspPI GGATC 3 cut(s) 115, 416, 435
BspT104I TTCGAA 1 cut(s) 396
BsrBI CCGCTC 1 cut(s) 520
BsrI ACTGG 3 cut(s) 200, 406, 483
BssECI CCNNGG 2 cut(s) 73, 766
BssMI GATC 4 cut(s) 100, 120, 421, 427
BssNI GRCGYC 1 cut(s) 625
Bst2UI CCWGG 2 cut(s) 75, 767
Bst4CI ACNGT 2 cut(s) 132, 796
Bst6I CTCTTC 1 cut(s) 605
BstACI GRCGYC 1 cut(s) 625
BstBAI YACGTR 1 cut(s) 246
BstBI TTCGAA 1 cut(s) 396
BstC8I GCNNGC 1 cut(s) 388
BstDEI CTNAG 4 cut(s) 209, 294, 306, 329
BstF5I GGATG 8 cut(s) 15, 380, 430, 470, 565, 657, 687, 758
BstKTI GATC 4 cut(s) 103, 123, 424, 430
BstMAI GTCTC 3 cut(s) 51, 632, 761
BstMBI GATC 4 cut(s) 100, 120, 421, 427
BstMWI GCNNNNNNNGC 3 cut(s) 91, 205, 722
BstNI CCWGG 2 cut(s) 75, 767
BstSCI CCNGG 5 cut(s) 36, 73, 153, 443, 765
BstSFI CTRYAG 1 cut(s) 43
BstV1I GCAGC 1 cut(s) 35
BstX2I RGATCY 1 cut(s) 421
BstYI RGATCY 1 cut(s) 421
BsuI GTATCC 1 cut(s) 80
BsuRI GGCC 5 cut(s) 36, 314, 361, 443, 517
BtgZI GCGATG 1 cut(s) 518
BtsCI GGATG 8 cut(s) 15, 380, 430, 470, 565, 657, 687, 758
BtsI GCAGTG 2 cut(s) 457, 718
BtsIMutI CAGTG 4 cut(s) 207, 217, 457, 718
Cac8I GCNNGC 1 cut(s) 388
CciI TCATGA 1 cut(s) 733
CseI GACGC 2 cut(s) 214, 614
Csp6I GTAC 4 cut(s) 4, 243, 249, 476
CspCI CAANNNNNGTGG 2 cut(s) 537, 572
CviAII CATG 4 cut(s) 20, 183, 494, 734
CviQI GTAC 4 cut(s) 4, 243, 249, 476
DdeI CTNAG 4 cut(s) 209, 294, 306, 329
DpnI GATC 4 cut(s) 102, 122, 423, 429
DpnII GATC 4 cut(s) 100, 120, 421, 427
DraI TTTAAA 1 cut(s) 220
DrdI GACNNNNNNGTC 1 cut(s) 104
DseDI GACNNNNNNGTC 1 cut(s) 104
EaeI YGGCCR 3 cut(s) 34, 441, 515
Eam1104I CTCTTC 1 cut(s) 605
EarI CTCTTC 1 cut(s) 605
Eco57I CTGAAG 2 cut(s) 575, 689
Eco88I CYCGRG 1 cut(s) 417
EcoRII CCWGG 2 cut(s) 73, 765
EcoT22I ATGCAT 1 cut(s) 382
Esp3I CGTCTC 1 cut(s) 632
FaeI CATG 4 cut(s) 23, 186, 497, 737
FaiI YATR 7 cut(s) 21, 45, 184, 266, 495, 659, 735
FaqI GGGAC 3 cut(s) 53, 137, 295
FatI CATG 4 cut(s) 19, 182, 493, 733
FauI CCCGC 1 cut(s) 613
Fnu4HI GCNGC 2 cut(s) 24, 518
FokI GGATG 8 cut(s) 2, 367, 417, 477, 572, 664, 694, 765
Fsp4HI GCNGC 2 cut(s) 24, 518
FspBI CTAG 2 cut(s) 366, 747
GluI GCNGC 2 cut(s) 24, 518
GsuI CTGGAG 1 cut(s) 500
HaeIII GGCC 5 cut(s) 36, 314, 361, 443, 517
HapII CCGG 4 cut(s) 37, 155, 425, 444
HgaI GACGC 2 cut(s) 214, 614
Hin1I GRCGYC 1 cut(s) 625
Hin1II CATG 4 cut(s) 23, 186, 497, 737
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HindIII AAGCTT 2 cut(s) 388, 587
HinfI GANTC 5 cut(s) 136, 283, 342, 454, 730
HpaII CCGG 4 cut(s) 37, 155, 425, 444
HphI GGTGA 2 cut(s) 658, 677
Hpy166II GTNNAC 2 cut(s) 178, 249
Hpy188I TCNGA 4 cut(s) 56, 271, 698, 708
Hpy188III TCNNGA 4 cut(s) 425, 629, 637, 734
Hpy8I GTNNAC 2 cut(s) 178, 249
Hpy99I CGWCG 1 cut(s) 630
HpyAV CCTTC 3 cut(s) 325, 557, 665
HpyCH4III ACNGT 2 cut(s) 132, 796
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 4 cut(s) 23, 215, 380, 725
HpyF10VI GCNNNNNNNGC 3 cut(s) 91, 205, 722
HpyF3I CTNAG 4 cut(s) 209, 294, 306, 329
HpySE526I ACGT 1 cut(s) 245
Hsp92I GRCGYC 1 cut(s) 625
Hsp92II CATG 4 cut(s) 23, 186, 497, 737
Kpn2I TCCGGA 1 cut(s) 424
Kzo9I GATC 4 cut(s) 100, 120, 421, 427
LmnI GCTCC 1 cut(s) 196
Lsp1109I GCAGC 1 cut(s) 35
LweI GCATC 2 cut(s) 389, 403
MaeI CTAG 2 cut(s) 366, 747
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 3 cut(s) 47, 202, 451
MalI GATC 4 cut(s) 102, 122, 423, 429
MbiI CCGCTC 1 cut(s) 520
MboI GATC 4 cut(s) 100, 120, 421, 427
MboII GAAGA 3 cut(s) 230, 385, 622
MflI RGATCY 1 cut(s) 421
MhlI GDGCHC 1 cut(s) 162
MluCI AATT 1 cut(s) 30
MlyI GAGTC 3 cut(s) 277, 448, 739
MmeI TCCRAC 3 cut(s) 59, 174, 303
Mph1103I ATGCAT 1 cut(s) 382
MroI TCCGGA 1 cut(s) 424
MroXI GAANNNNTTC 2 cut(s) 230, 341
MseI TTAA 1 cut(s) 219
MspI CCGG 4 cut(s) 37, 155, 425, 444
MspR9I CCNGG 5 cut(s) 38, 75, 155, 445, 767
Mva1269I GAATGC 1 cut(s) 547
MvaI CCWGG 2 cut(s) 75, 767
MwoI GCNNNNNNNGC 3 cut(s) 91, 205, 722
NciI CCSGG 3 cut(s) 38, 155, 445
NdeII GATC 4 cut(s) 100, 120, 421, 427
NlaIII CATG 4 cut(s) 23, 186, 497, 737
NlaIV GGNNCC 1 cut(s) 198
NmeAIII GCCGAG 2 cut(s) 337, 553
NmuCI GTSAC 2 cut(s) 202, 451
NsiI ATGCAT 1 cut(s) 382
NspV TTCGAA 1 cut(s) 396
PagI TCATGA 1 cut(s) 733
PctI GAATGC 1 cut(s) 547
PdmI GAANNNNTTC 2 cut(s) 230, 341
PfeI GAWTC 2 cut(s) 136, 342
Pfl23II CGTACG 1 cut(s) 242
PflFI GACNNNGTC 1 cut(s) 286
PkrI GCNGC 2 cut(s) 25, 519
PleI GAGTC 3 cut(s) 277, 448, 738
PpsI GAGTC 3 cut(s) 277, 448, 738
Ppu21I YACGTR 1 cut(s) 246
Psp6I CCWGG 2 cut(s) 73, 765
PspGI CCWGG 2 cut(s) 73, 765
PspLI CGTACG 1 cut(s) 242
PspN4I GGNNCC 1 cut(s) 198
PsuI RGATCY 1 cut(s) 421
PsyI GACNNNGTC 1 cut(s) 286
RsaI GTAC 4 cut(s) 5, 244, 250, 477
RsaNI GTAC 4 cut(s) 4, 243, 249, 476
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 2 cut(s) 24, 518
Sau3AI GATC 4 cut(s) 100, 120, 421, 427
SchI GAGTC 3 cut(s) 277, 448, 739
ScrFI CCNGG 5 cut(s) 38, 75, 155, 445, 767
SduI GDGCHC 1 cut(s) 162
SetI ASST 7 cut(s) 66, 248, 376, 392, 591, 597, 705
SfaNI GCATC 2 cut(s) 389, 403
SfcI CTRYAG 1 cut(s) 43
SfuI TTCGAA 1 cut(s) 396
Sse9I AATT 1 cut(s) 30
SsiI CCGC 6 cut(s) 276, 384, 462, 518, 620, 644
SspMI CTAG 2 cut(s) 366, 747
StyD4I CCNGG 5 cut(s) 36, 73, 153, 443, 765
TaaI ACNGT 2 cut(s) 132, 796
TaiI ACGT 1 cut(s) 248
TaqI TCGA 2 cut(s) 396, 636
TasI AATT 1 cut(s) 30
TatI WGTACW 2 cut(s) 3, 475
TauI GCSGC 1 cut(s) 520
TfiI GAWTC 2 cut(s) 136, 342
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TscAI CASTG 4 cut(s) 207, 217, 464, 718
TseFI GTSAC 2 cut(s) 202, 451
TseI GCWGC 1 cut(s) 23
Tsp45I GTSAC 2 cut(s) 202, 451
TspDTI ATGAA 3 cut(s) 482, 554, 576
TspGWI ACGGA 1 cut(s) 801
TspRI CASTG 4 cut(s) 207, 217, 464, 718
Tth111I GACNNNGTC 1 cut(s) 286
XmnI GAANNNNTTC 2 cut(s) 230, 341
XspI CTAG 2 cut(s) 366, 747
Zsp2I ATGCAT 1 cut(s) 382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.