Rmu_sc0004862.1_g000014

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004862.1
Physical Location & Seq
Reverse (-)
50495 .. 52315
1821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004862.1_g000014.1.cds

Sequence Viewer

Length: 1242 bp
atggagtggattatgagtgagattaagaaagagaggcctaatatcgaatgggtttcttctccgagcaccaacagtgagcctaagaagcttaggaagaaattggaatggtgggtatctttggatgaagaggtggactttctcagcgacgtcatttgcatcgaagtcggagtggacctcgaggtggaagaggcgggagaggaagaaaaagcggccgagatgattgaggagcttgctgatttggttggtgcggacggagatcaaccgcttgttgccgccatgctggcctctggggaaggactccgagttggaatcgtcgtcgacgagagcggctgcggaagattgggtgtagtggcgaagctggaggggtgcgaagagggcggaggcgcaacggcactggaggaggaacattttggatttgggagccctcgatcaggagggatggtgaagcttaaagggggtggaggcactgtaactcagcctcactgctccggtgaacttaccagtgtggagtttgacctccaggtccatatagatgaaacaacgaccaagttttgtgctttacaggactcggtctcgaaaatccttgaagaactcagatccatgaaggcggaggctaagaacctgcagatccagcaaggttcacctcagctgaacgttggatccatacctgtccctgttggtttagcagagggtagctctatggggatatcggcgtcgtcgactatggctacgtcggcttctattcaagttgaaggagagggtagcacaactaaacccaatcattctagctgtagttttcctttgaacttaaatgataatgatgtgatattggggtttgctagtgatcattatgctgaaatgattaaggctaccaatcttatgcaaacaactagtactactgtgagtggaactgattcaactaagaaattggatcataaagttgttggatgcatgggacctcgcagcttgtcacatcatgaacaaaatcatttttctcagcatgccagttttgactcacaaatctttaaccggatttctggacatggtaacacctcaacacatggcttgaatacaagtgcatatggatttgctccaacttcacactatagctacacagatccatttgtcatgacctattcaggaccctacccacacactccaattgatttcacatcatatttgcaaccttccccaccctactctaccatttcacatcatatttgcaacctactctaccattag

Protein Analysis

413

Amino Acids

44.46

Weight (kDa)

4.85

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 521
AatII GACGTC 1 cut(s) 150
AbsI CCTCGAGG 1 cut(s) 176
Acc36I ACCTGC 1 cut(s) 630
AccBSI CCGCTC 1 cut(s) 327
AccI GTMKAC 2 cut(s) 318, 719
AciI CCGC 9 cut(s) 191, 209, 248, 263, 273, 327, 333, 378, 608
AclI AACGTT 1 cut(s) 654
AclWI GGATC 6 cut(s) 591, 622, 654, 667, 939, 1112
AcoI YGGCCR 1 cut(s) 210
AcyI GRCGYC 2 cut(s) 147, 713
AfaI GTAC 1 cut(s) 895
AfiI CCNNNNNNNGG 2 cut(s) 181, 431
AgsI TTSAA 6 cut(s) 587, 746, 752, 805, 918, 1069
AhlI ACTAGT 1 cut(s) 890
AjnI CCWGG 1 cut(s) 519
AloI GAACNNNNNNTCC 2 cut(s) 644, 676
AluBI AGCT 9 cut(s) 88, 229, 358, 448, 649, 696, 789, 966, 1110
AluI AGCT 9 cut(s) 88, 229, 358, 448, 649, 696, 789, 966, 1110
Alw21I GWGCWC 1 cut(s) 68
Alw26I GTCTC 1 cut(s) 577
AlwI GGATC 6 cut(s) 591, 622, 654, 667, 939, 1112
Ama87I CYCGRG 1 cut(s) 176
AoxI GGCC 3 cut(s) 35, 210, 282
ApeKI GCWGC 2 cut(s) 330, 963
Asp700I GAANNNNTTC 1 cut(s) 913
AspLEI GCGC 1 cut(s) 386
AspS9I GGNCC 4 cut(s) 172, 523, 956, 1142
AsuHPI GGTGA 3 cut(s) 454, 503, 633
AvaI CYCGRG 1 cut(s) 176
AvaII GGWCC 4 cut(s) 172, 523, 956, 1142
BamHI GGATCC 1 cut(s) 659
BanII GRGCYC 1 cut(s) 425
Bbv12I GWGCWC 1 cut(s) 68
BbvCI CCTCAGC 1 cut(s) 645
BbvI GCAGC 2 cut(s) 317, 975
BccI CCATC 1 cut(s) 433
BceAI ACGGC 1 cut(s) 405
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 1 cut(s) 521
BclI TGATCA 1 cut(s) 844
BcoDI GTCTC 1 cut(s) 577
BcuI ACTAGT 1 cut(s) 890
BfaI CTAG 3 cut(s) 786, 840, 891
BfmI CTRYAG 3 cut(s) 623, 790, 1105
BfuAI ACCTGC 1 cut(s) 630
BglI GCCNNNNNGGC 1 cut(s) 281
BisI GCNGC 5 cut(s) 210, 273, 328, 331, 964
BlsI GCNGC 5 cut(s) 211, 274, 329, 332, 965
BmcAI AGTACT 1 cut(s) 895
Bme1390I CCNGG 1 cut(s) 521
Bme18I GGWCC 4 cut(s) 172, 523, 956, 1142
BmeT110I CYCGRG 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 172, 523, 956, 1142
BmiI GGNNCC 4 cut(s) 422, 661, 957, 1144
BmrFI CCNGG 1 cut(s) 521
BmsI GCATC 2 cut(s) 165, 938
BplI GAGNNNNNCTC 4 cut(s) 159, 191, 680, 712
BpmI CTGGAG 3 cut(s) 380, 416, 503
Bpu10I CCTNAGC 2 cut(s) 89, 645
BsaHI GRCGYC 2 cut(s) 147, 713
BsaI GGTCTC 1 cut(s) 577
BsaWI WCCGGW 2 cut(s) 488, 1029
BsaXI ACNNNNNCTCC 4 cut(s) 426, 453, 456, 483
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 431
Bse1I ACTGG 3 cut(s) 399, 501, 1005
BseBI CCWGG 1 cut(s) 521
BseGI GGATG 3 cut(s) 127, 444, 953
BseLI CCNNNNNNNGG 2 cut(s) 181, 431
BseMII CTCAG 5 cut(s) 154, 488, 607, 659, 1010
BseNI ACTGG 3 cut(s) 399, 501, 1005
BseRI GAGGAG 2 cut(s) 239, 413
BseX3I CGGCCG 1 cut(s) 210
BseXI GCAGC 2 cut(s) 317, 975
Bsh1285I CGRYCG 1 cut(s) 213
BshFI GGCC 3 cut(s) 37, 212, 284
BsiEI CGRYCG 1 cut(s) 213
BsiHKAI GWGCWC 1 cut(s) 68
BsiHKCI CYCGRG 1 cut(s) 176
BsiSI CCGG 2 cut(s) 489, 1030
BslFI GGGAC 2 cut(s) 656, 969
BslI CCNNNNNNNGG 2 cut(s) 181, 431
BsmAI GTCTC 1 cut(s) 577
BsmFI GGGAC 2 cut(s) 656, 969
BsnI GGCC 3 cut(s) 37, 212, 284
Bso31I GGTCTC 1 cut(s) 577
BsoBI CYCGRG 1 cut(s) 176
Bsp1286I GDGCHC 2 cut(s) 68, 425
Bsp143I GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
BspACI CCGC 9 cut(s) 191, 209, 248, 263, 273, 327, 333, 378, 608
BspANI GGCC 3 cut(s) 37, 212, 284
BspCNI CTCAG 5 cut(s) 153, 487, 606, 658, 1009
BspHI TCATGA 2 cut(s) 976, 1128
BspLI GGNNCC 4 cut(s) 422, 661, 957, 1144
BspMAI CTGCAG 1 cut(s) 627
BspMI ACCTGC 1 cut(s) 630
BspPI GGATC 6 cut(s) 591, 622, 654, 667, 939, 1112
BspTNI GGTCTC 1 cut(s) 577
BsrBI CCGCTC 1 cut(s) 327
BsrI ACTGG 3 cut(s) 399, 501, 1005
BssMI GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
BssNI GRCGYC 2 cut(s) 147, 713
Bst2UI CCWGG 1 cut(s) 521
Bst4CI ACNGT 3 cut(s) 74, 469, 901
Bst6I CTCTTC 3 cut(s) 120, 180, 366
BstACI GRCGYC 2 cut(s) 147, 713
BstC8I GCNNGC 3 cut(s) 231, 282, 1002
BstDEI CTNAG 9 cut(s) 81, 89, 140, 474, 593, 615, 645, 921, 996
BstENI CCTNNNNNAGG 1 cut(s) 429
BstF5I GGATG 3 cut(s) 127, 444, 953
BstHHI GCGC 1 cut(s) 386
BstKTI GATC 8 cut(s) 259, 431, 599, 630, 662, 847, 934, 1120
BstMAI GTCTC 1 cut(s) 577
BstMBI GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
BstMCI CGRYCG 1 cut(s) 213
BstMWI GCNNNNNNNGC 5 cut(s) 85, 281, 375, 631, 734
BstNI CCWGG 1 cut(s) 521
BstNSI RCATGY 1 cut(s) 1004
BstSCI CCNGG 1 cut(s) 519
BstSFI CTRYAG 3 cut(s) 623, 790, 1105
BstV1I GCAGC 2 cut(s) 317, 975
BstX2I RGATCY 4 cut(s) 596, 627, 659, 1117
BstYI RGATCY 4 cut(s) 596, 627, 659, 1117
BstZI CGGCCG 1 cut(s) 210
BsuRI GGCC 3 cut(s) 37, 212, 284
BtsCI GGATG 3 cut(s) 127, 444, 953
BtsI GCAGTG 1 cut(s) 481
BtsIMutI CAGTG 5 cut(s) 79, 392, 465, 481, 508
BveI ACCTGC 1 cut(s) 630
Cac8I GCNNGC 3 cut(s) 231, 282, 1002
CciI TCATGA 2 cut(s) 976, 1128
CfoI GCGC 1 cut(s) 386
Cfr13I GGNCC 4 cut(s) 172, 523, 956, 1142
CseI GACGC 1 cut(s) 702
Csp6I GTAC 1 cut(s) 894
CviAII CATG 8 cut(s) 277, 601, 952, 977, 1001, 1043, 1061, 1129
CviQI GTAC 1 cut(s) 894
DdeI CTNAG 9 cut(s) 81, 89, 140, 474, 593, 615, 645, 921, 996
DpnI GATC 8 cut(s) 258, 430, 598, 629, 661, 846, 933, 1119
DpnII GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
DrdI GACNNNNNNGTC 1 cut(s) 521
DseDI GACNNNNNNGTC 1 cut(s) 521
EaeI YGGCCR 1 cut(s) 210
EagI CGGCCG 1 cut(s) 210
Eam1104I CTCTTC 3 cut(s) 120, 180, 366
EarI CTCTTC 3 cut(s) 120, 180, 366
EciI GGCGGA 2 cut(s) 393, 623
EclXI CGGCCG 1 cut(s) 210
Eco147I AGGCCT 1 cut(s) 37
Eco24I GRGCYC 1 cut(s) 425
Eco31I GGTCTC 1 cut(s) 577
Eco32I GATATC 1 cut(s) 708
Eco47I GGWCC 4 cut(s) 172, 523, 956, 1142
Eco52I CGGCCG 1 cut(s) 210
Eco88I CYCGRG 1 cut(s) 176
EcoNI CCTNNNNNAGG 1 cut(s) 429
EcoO109I RGGNCCY 2 cut(s) 956, 1142
EcoRII CCWGG 1 cut(s) 519
EcoRV GATATC 1 cut(s) 708
EcoT22I ATGCAT 1 cut(s) 953
EcoT38I GRGCYC 1 cut(s) 425
FaeI CATG 8 cut(s) 280, 604, 955, 980, 1004, 1046, 1064, 1132
FaqI GGGAC 2 cut(s) 656, 969
FatI CATG 8 cut(s) 276, 600, 951, 976, 1000, 1042, 1060, 1128
FauI CCCGC 1 cut(s) 184
FauNDI CATATG 1 cut(s) 1081
FbaI TGATCA 1 cut(s) 844
FblI GTMKAC 2 cut(s) 318, 719
Fnu4HI GCNGC 5 cut(s) 210, 273, 328, 331, 964
FokI GGATG 3 cut(s) 134, 451, 960
FriOI GRGCYC 1 cut(s) 425
Fsp4HI GCNGC 5 cut(s) 210, 273, 328, 331, 964
FspBI CTAG 3 cut(s) 786, 840, 891
GlaI GCGC 1 cut(s) 385
GluI GCNGC 5 cut(s) 210, 273, 328, 331, 964
GsuI CTGGAG 3 cut(s) 380, 416, 503
HaeIII GGCC 3 cut(s) 37, 212, 284
HapII CCGG 2 cut(s) 489, 1030
HgaI GACGC 1 cut(s) 702
HhaI GCGC 1 cut(s) 386
Hin1I GRCGYC 2 cut(s) 147, 713
Hin1II CATG 8 cut(s) 280, 604, 955, 980, 1004, 1046, 1064, 1132
Hin6I GCGC 1 cut(s) 384
HinP1I GCGC 1 cut(s) 384
HincII GTYRAC 2 cut(s) 319, 720
HindII GTYRAC 2 cut(s) 319, 720
HindIII AAGCTT 2 cut(s) 86, 446
HinfI GANTC 5 cut(s) 297, 309, 566, 914, 1013
HpaII CCGG 2 cut(s) 489, 1030
HphI GGTGA 3 cut(s) 454, 503, 633
Hpy166II GTNNAC 6 cut(s) 133, 172, 319, 494, 641, 720
Hpy188I TCNGA 4 cut(s) 63, 167, 302, 596
Hpy188III TCNNGA 6 cut(s) 432, 574, 977, 1038, 1129, 1140
Hpy8I GTNNAC 6 cut(s) 133, 172, 319, 494, 641, 720
Hpy99I CGWCG 7 cut(s) 149, 317, 320, 323, 718, 721, 736
HpyAV CCTTC 4 cut(s) 287, 598, 746, 1197
HpyCH4III ACNGT 3 cut(s) 74, 469, 901
HpyCH4IV ACGT 3 cut(s) 147, 654, 731
HpyCH4V TGCA 7 cut(s) 156, 625, 883, 951, 1079, 1183, 1224
HpyF10VI GCNNNNNNNGC 5 cut(s) 85, 281, 375, 631, 734
HpyF3I CTNAG 9 cut(s) 81, 89, 140, 474, 593, 615, 645, 921, 996
HpySE526I ACGT 3 cut(s) 147, 654, 731
Hsp92I GRCGYC 2 cut(s) 147, 713
Hsp92II CATG 8 cut(s) 280, 604, 955, 980, 1004, 1046, 1064, 1132
HspAI GCGC 1 cut(s) 384
Ksp22I TGATCA 1 cut(s) 844
Kzo9I GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
LmnI GCTCC 4 cut(s) 226, 420, 491, 1096
Lsp1109I GCAGC 2 cut(s) 317, 975
LweI GCATC 2 cut(s) 165, 938
MaeI CTAG 3 cut(s) 786, 840, 891
MaeII ACGT 3 cut(s) 147, 654, 731
MaeIII GTNAC 3 cut(s) 469, 969, 1046
MalI GATC 8 cut(s) 258, 430, 598, 629, 661, 846, 933, 1119
MbiI CCGCTC 1 cut(s) 327
MboI GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
MboII GAAGA 8 cut(s) 48, 106, 137, 197, 212, 348, 383, 599
MfeI CAATTG 1 cut(s) 1161
MflI RGATCY 4 cut(s) 596, 627, 659, 1117
MhlI GDGCHC 2 cut(s) 68, 425
MluCI AATT 3 cut(s) 98, 926, 1161
MlyI GAGTC 3 cut(s) 291, 560, 1007
MmeI TCCRAC 5 cut(s) 145, 286, 637, 925, 1118
Mph1103I ATGCAT 1 cut(s) 953
MroXI GAANNNNTTC 1 cut(s) 913
MseI TTAA 5 cut(s) 24, 450, 809, 864, 1026
MslI CAYNNNNRTG 1 cut(s) 531
MspA1I CMGCKG 1 cut(s) 649
MspI CCGG 2 cut(s) 489, 1030
MspR9I CCNGG 1 cut(s) 521
MunI CAATTG 1 cut(s) 1161
MvaI CCWGG 1 cut(s) 521
MwoI GCNNNNNNNGC 5 cut(s) 85, 281, 375, 631, 734
NdeI CATATG 1 cut(s) 1081
NdeII GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
NlaIII CATG 8 cut(s) 280, 604, 955, 980, 1004, 1046, 1064, 1132
NlaIV GGNNCC 4 cut(s) 422, 661, 957, 1144
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 1 cut(s) 969
NsiI ATGCAT 1 cut(s) 953
NspI RCATGY 1 cut(s) 1004
PaeI GCATGC 1 cut(s) 1004
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 2 cut(s) 976, 1128
PceI AGGCCT 1 cut(s) 37
PcsI WCGNNNNNNNCGW 2 cut(s) 318, 716
PdmI GAANNNNTTC 1 cut(s) 913
PfeI GAWTC 2 cut(s) 309, 914
PflFI GACNNNGTC 1 cut(s) 569
PkrI GCNGC 5 cut(s) 211, 274, 329, 332, 965
PleI GAGTC 3 cut(s) 291, 560, 1007
PpsI GAGTC 3 cut(s) 291, 560, 1007
PpuMI RGGWCCY 2 cut(s) 956, 1142
Psp1406I AACGTT 1 cut(s) 654
Psp5II RGGWCCY 2 cut(s) 956, 1142
Psp6I CCWGG 1 cut(s) 519
PspGI CCWGG 1 cut(s) 519
PspN4I GGNNCC 4 cut(s) 422, 661, 957, 1144
PspPI GGNCC 4 cut(s) 172, 523, 956, 1142
PspPPI RGGWCCY 2 cut(s) 956, 1142
PspXI VCTCGAGB 1 cut(s) 176
PstI CTGCAG 1 cut(s) 627
PsuI RGATCY 4 cut(s) 596, 627, 659, 1117
PsyI GACNNNGTC 1 cut(s) 569
PvuII CAGCTG 1 cut(s) 649
RsaI GTAC 1 cut(s) 895
RsaNI GTAC 1 cut(s) 894
RseI CAYNNNNRTG 1 cut(s) 531
SalI GTCGAC 2 cut(s) 317, 718
SaqAI TTAA 5 cut(s) 24, 450, 809, 864, 1026
SatI GCNGC 5 cut(s) 210, 273, 328, 331, 964
Sau3AI GATC 8 cut(s) 256, 428, 596, 627, 659, 844, 931, 1117
Sau96I GGNCC 4 cut(s) 172, 523, 956, 1142
ScaI AGTACT 1 cut(s) 895
SchI GAGTC 3 cut(s) 291, 560, 1007
ScrFI CCNGG 1 cut(s) 521
SduI GDGCHC 2 cut(s) 68, 425
SfaNI GCATC 2 cut(s) 165, 938
SfcI CTRYAG 3 cut(s) 623, 790, 1105
Sfr274I CTCGAG 1 cut(s) 176
SgrDI CGTCGACG 1 cut(s) 317
SinI GGWCC 4 cut(s) 172, 523, 956, 1142
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 1 cut(s) 531
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
SpeI ACTAGT 1 cut(s) 890
SphI GCATGC 1 cut(s) 1004
Sse9I AATT 3 cut(s) 98, 926, 1161
SseBI AGGCCT 1 cut(s) 37
SsiI CCGC 9 cut(s) 191, 209, 248, 263, 273, 327, 333, 378, 608
SspMI CTAG 3 cut(s) 786, 840, 891
StuI AGGCCT 1 cut(s) 37
StyD4I CCNGG 1 cut(s) 519
TaaI ACNGT 3 cut(s) 74, 469, 901
TaiI ACGT 3 cut(s) 150, 657, 734
TaqI TCGA 7 cut(s) 45, 159, 177, 318, 427, 575, 719
TaqII GACCGA 1 cut(s) 559
TasI AATT 3 cut(s) 98, 926, 1161
TatI WGTACW 1 cut(s) 893
TauI GCSGC 3 cut(s) 212, 275, 330
TfiI GAWTC 2 cut(s) 309, 914
Tru1I TTAA 5 cut(s) 24, 450, 809, 864, 1026
Tru9I TTAA 5 cut(s) 24, 450, 809, 864, 1026
TscAI CASTG 5 cut(s) 79, 399, 472, 488, 508
TseFI GTSAC 1 cut(s) 969
TseI GCWGC 2 cut(s) 330, 963
Tsp45I GTSAC 1 cut(s) 969
TspDTI ATGAA 4 cut(s) 138, 549, 617, 993
TspGWI ACGGA 1 cut(s) 267
TspRI CASTG 5 cut(s) 79, 399, 472, 488, 508
Tth111I GACNNNGTC 1 cut(s) 569
VpaK11BI GGWCC 4 cut(s) 172, 523, 956, 1142
XagI CCTNNNNNAGG 1 cut(s) 429
XceI RCATGY 1 cut(s) 1004
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 2 cut(s) 318, 719
XmnI GAANNNNTTC 1 cut(s) 913
XspI CTAG 3 cut(s) 786, 840, 891
ZraI GACGTC 1 cut(s) 148
ZrmI AGTACT 1 cut(s) 895
Zsp2I ATGCAT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.