Rmu_sc0007276.1_g000009

Hypothetical methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007276.1
OG0011785
Physical Location & Seq
Forward (+)
35657 .. 43840
8184 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007276.1_g000009.1.cds

Sequence Viewer

Length: 2613 bp
atgtcggctacaagcacggaggatgtgaaggaccaagagcttgctgatagtgctctcaataaccaaggtcacggtgacagtgctgagcaagacataaaagcttcagatgaaagccgcgatgaacatcccatgccttcagttcagaaggaggaggaaacaattaagaaaaagtatgggggtattattcctaagaagcctccactaatatccaaggaccatgagcgggcttattttgattctgctgattgggcattgggaaagggagcacataagccgaaaggaccacttgaagcactccgcccaaagctgcagcctacaccacaccagcaagtgcgttcgaggcgcgcctcctatacacgcgcagatgatgttgaagtagatggcgtcaataacaacactttggaggaggaagtccaatccagcgaaaccgatggtagcagcagtaacaacaccagcacaaacaccgctactgaggatgagagccgccatgaagtcaactcggacgcttcaccggccggatcactcgggccggactcgttctgtccgagcggcttatgttcttgcggaagaagacgcttcatcgaagcagcagtcacttcatctctattcccaatttgcccctccacctccttcgcttgcaagtcgcagttcgacgattatacggccacgttgaggaaagttcaccctcctcgaccagactggtatgaagagttgtatgcgtcagtgttgaacaccggcatgcaatcttacgaagacgagattgcgggttacaagacggagctctttgctaagttgaagggaaaagctgagcaagtgttggaaattggaatagggactggtcctaatctaagatactatggtgctgatgatggtgtccgagttttcggcgtggatcctaataaaaagatggaaagatatgctaaggctgcggcagtggctgctggtctgcccctttcgaactttgagtttatacaagcagttggggaggctataccattagatgatgcttctgttgatgcagttgttggaaccctagtattgtgttctgtaaaagatgtcaacaagactctaaaagagattaagagagtgctgagaccaggtggactctacttgtttgtggagcatgtggctgcaaaagatgggacagccctcagatttatacagagtgttcttgatcctttgcaacaaacccttgccgatgggtgtcatctcacccgggaaacaggaaccaatatatccagatccggcttctcaggcgtcgagcttagcatgacttccttgtccagtacctcaattataaaccctcaaatctatggaatagctttcaagccacatgagtcacatacggccagtagggactggtctgttggtccagacgagccttgttggcgaactaatacgagcttttctccacctccttcgagatgggattttcgattccaatctgaagaactgcaatatggtttgcatgatggtgtgcaactatatgggtcttctacttcatcaaacagtagaggaagtaggggatgggtgagagggaatcatctctataatcatcattactctgcatctgatggtgctgggctgtttttaagtagttcgtctgaccattctcaaggtcctcagtggacacctccagcaatacaggaaatcagtatcgatgattatgaaactacaaaaaggagaggtccagcttttgggaagtcatcctttagacctaccatggagggaacctcagaaattcaagatactggggggtccacgtcatctcgttcagacagtagtgaatctgaacccacggtcaaggcatccctatcttgtcatcatactttcgcaagtcgccgttctttcatgtccaaacctatatatcccttgtcatttcctccacaaactccccccagagaggcttctgacttcacagttgctgggtttcctgaatttgatgctgctactcctcagagagatggccaccgctggagcagtgccagcagcagtgttgattttactgatgtttctgagtcatttgaggcagaaatttctggtcgacactttagtaatatgtctgaggggtttagatgtggcttgtgtgataggttcctttcacagagatcaccttggagttctcgtcgcatagtcagaagtggagatatgccaatcactggggttctttcttgttgtcatgttttccatgcagagtgcttggagcaaacaacaccgaagatccgcaaaagtgaccctccttgccccctatgtgcccgacttgatgaggaaaatctctctgaacagcaaaacttttctagattgcgagctagttttccaagacttagaccaattagtgatgatggaccatccaggccttggggatgcgctcaggtgggagattgtgttgaaggggctttgcatgctcccccacgaaatagtatgctgttgcttaataggagtcgcataaagaaaaatctttctttgaaaagtaattcgagcaaagaatttcctggtaagttgagaaaaagcggcgcttactattcacaacatctgagtggaaactcagttgatcagggagcagttggatgctcaaagtcaaagatgacagcagggccgagtattaagagctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11

Protein Analysis

870

Amino Acids

95.16

Weight (kDa)

6.1

Isoelectric Point (pI)

53.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011785)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14180 AT1G14180
fragaria_vesca FvH4_4g31130 FvH4_4g31130
malus_domestica MD13G1070100.v1.1 MD16G1070500.v1.1
prunus_persica Prupe.1G276800_v2.0.a1
pyrus_communis pycom13g06280 pycom16g06130
rosa_chinensis RchiOBHm_Chr4g0439521
rosa_laevigata RLG00000006261
rosa_multiflora Rmu_sc0007276.1_g000009
rosa_roxburghii Rroxscaffold_5G00380440
rosa_rugosa Rorug04G0319300
rosa_samantha Rh4AG370400 Rh4BG382300 Rh4CG396900 Rh4DG377000
rosa_wichuraiana Rw4G031580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1298
AasI GACNNNNNNGTC 1 cut(s) 1279
AccB7I CCANNNNNTGG 3 cut(s) 1697, 2159, 2358
AccBSI CCGCTC 2 cut(s) 223, 549
AccI GTMKAC 1 cut(s) 2044
AccII CGCG 3 cut(s) 117, 345, 360
AclWI GGATC 6 cut(s) 526, 887, 900, 1169, 1236, 2215
AcoI YGGCCR 4 cut(s) 513, 663, 1347, 1966
AcsI RAATTY 4 cut(s) 1740, 1937, 2034, 2486
AcuI CTGAAG 3 cut(s) 87, 120, 1467
AcyI GRCGYC 2 cut(s) 384, 1257
AfaI GTAC 1 cut(s) 1288
AfiI CCNNNNNNNGG 6 cut(s) 223, 672, 1697, 1903, 2159, 2358
AgsI TTSAA 8 cut(s) 290, 374, 730, 796, 1327, 1745, 2390, 2467
AjiI CACGTC 1 cut(s) 1764
AjnI CCWGG 3 cut(s) 1096, 2351, 2491
Alw21I GWGCWC 3 cut(s) 55, 268, 783
Alw26I GTCTC 1 cut(s) 1087
AlwI GGATC 6 cut(s) 526, 887, 900, 1169, 1236, 2215
AlwNI CAGNNNCTG 2 cut(s) 938, 1925
Ama87I CYCGRG 2 cut(s) 524, 1215
AoxI GGCC 7 cut(s) 513, 527, 663, 1347, 1966, 2354, 2594
ApeKI GCWGC 9 cut(s) 307, 310, 438, 587, 926, 938, 1130, 1946, 1989
ApoI RAATTY 4 cut(s) 1740, 1937, 2034, 2486
ArsI GACNNNNNNTTYG 2 cut(s) 576, 608
AscI GGCGCGCC 1 cut(s) 343
AspLEI GCGC 5 cut(s) 345, 347, 362, 2369, 2516
AsuC2I CCSGG 2 cut(s) 1216, 1217
AsuHPI GGTGA 6 cut(s) 86, 501, 674, 1204, 1543, 2103
AsuII TTCGAA 1 cut(s) 956
AvaI CYCGRG 2 cut(s) 524, 1215
AvaII GGWCC 9 cut(s) 31, 214, 281, 839, 1370, 1619, 1688, 1758, 2345
BaeGI GKGCMC 1 cut(s) 2257
BaeI ACNNNNGTAYC 2 cut(s) 844, 877
BalI TGGCCA 1 cut(s) 1968
BamHI GGATCC 1 cut(s) 892
BanII GRGCYC 1 cut(s) 783
BbsI GAAGAC 3 cut(s) 577, 759, 1485
Bbv12I GWGCWC 3 cut(s) 55, 268, 783
BbvI GCAGC 9 cut(s) 294, 322, 450, 599, 913, 925, 1117, 1933, 2001
BceAI ACGGC 3 cut(s) 678, 1362, 1827
BciT130I CCWGG 3 cut(s) 1098, 2353, 2493
BclI TGATCA 1 cut(s) 2551
BcnI CCSGG 2 cut(s) 1216, 1217
BcoDI GTCTC 1 cut(s) 1087
BfaI CTAG 3 cut(s) 1034, 2298, 2310
BfmI CTRYAG 1 cut(s) 308
BfoI RGCGCY 1 cut(s) 2517
BglI GCCNNNNNGGC 1 cut(s) 1387
BlpI GCTNAGC 3 cut(s) 84, 807, 1265
Bme1390I CCNGG 5 cut(s) 1098, 1216, 1217, 2353, 2493
Bme18I GGWCC 9 cut(s) 31, 214, 281, 839, 1370, 1619, 1688, 1758, 2345
BmeT110I CYCGRG 2 cut(s) 524, 1215
BmgBI CACGTC 1 cut(s) 1764
BmiI GGNNCC 6 cut(s) 894, 1030, 1228, 1732, 1759, 2096
BmrFI CCNGG 5 cut(s) 1098, 1216, 1217, 2353, 2493
BmrI ACTGGG 2 cut(s) 1761, 2169
BmsI GCATC 7 cut(s) 994, 1006, 1577, 1817, 1933, 2354, 2558
BmuI ACTGGG 2 cut(s) 1761, 2169
BpiI GAAGAC 3 cut(s) 577, 759, 1485
BplI GAGNNNNNCTC 4 cut(s) 1393, 1425, 1718, 1750
BpmI CTGGAG 2 cut(s) 1620, 1996
Bpu10I CCTNAGC 2 cut(s) 921, 2370
Bpu1102I GCTNAGC 3 cut(s) 84, 807, 1265
Bpu14I TTCGAA 1 cut(s) 956
BpuEI CTTGAG 1 cut(s) 1599
BpuMI CCSGG 2 cut(s) 1216, 1217
Bsa29I ATCGAT 1 cut(s) 1659
BsaBI GATNNNNATC 2 cut(s) 123, 1441
BsaHI GRCGYC 2 cut(s) 384, 1257
BsaI GGTCTC 1 cut(s) 1087
BsaJI CCNNGG 7 cut(s) 64, 210, 1215, 1722, 1797, 2114, 2357
BsaXI ACNNNNNCTCC 4 cut(s) 2110, 2140, 2370, 2400
Bsc4I CCNNNNNNNGG 6 cut(s) 223, 672, 1697, 1903, 2159, 2358
Bse118I RCCGGY 2 cut(s) 511, 734
Bse1I ACTGG 7 cut(s) 704, 841, 1284, 1350, 1364, 1756, 2164
Bse8I GATNNNNATC 2 cut(s) 123, 1441
BseBI CCWGG 3 cut(s) 1098, 2353, 2493
BseCI ATCGAT 1 cut(s) 1659
BseDI CCNNGG 7 cut(s) 64, 210, 1215, 1722, 1797, 2114, 2357
BseGI GGATG 9 cut(s) 28, 124, 481, 1532, 1706, 1808, 2348, 2369, 2573
BseJI GATNNNNATC 2 cut(s) 123, 1441
BseLI CCNNNNNNNGG 6 cut(s) 223, 672, 1697, 1903, 2159, 2358
BseNI ACTGG 7 cut(s) 704, 841, 1284, 1350, 1364, 1756, 2164
BsePI GCGCGC 1 cut(s) 343
BseRI GAGGAG 4 cut(s) 164, 419, 678, 1944
BseSI GKGCMC 1 cut(s) 2257
BseX3I CGGCCG 1 cut(s) 513
BseXI GCAGC 9 cut(s) 294, 322, 450, 599, 913, 925, 1117, 1933, 2001
BseYI CCCAGC 2 cut(s) 1580, 1925
Bsh1236I CGCG 3 cut(s) 117, 345, 360
Bsh1285I CGRYCG 1 cut(s) 516
BshFI GGCC 7 cut(s) 515, 529, 665, 1349, 1968, 2356, 2596
BshVI ATCGAT 1 cut(s) 1659
BsiEI CGRYCG 1 cut(s) 516
BsiHKAI GWGCWC 3 cut(s) 55, 268, 783
BsiHKCI CYCGRG 2 cut(s) 524, 1215
BsiSI CCGG 6 cut(s) 512, 516, 530, 735, 1216, 1245
BslFI GGGAC 3 cut(s) 847, 1156, 1370
BslI CCNNNNNNNGG 6 cut(s) 223, 672, 1697, 1903, 2159, 2358
BsmAI GTCTC 1 cut(s) 1087
BsmFI GGGAC 3 cut(s) 847, 1156, 1370
BsnI GGCC 7 cut(s) 515, 529, 665, 1349, 1968, 2356, 2596
Bso31I GGTCTC 1 cut(s) 1087
BsoBI CYCGRG 2 cut(s) 524, 1215
Bsp119I TTCGAA 1 cut(s) 956
Bsp1286I GDGCHC 4 cut(s) 55, 268, 783, 2257
Bsp143I GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
Bsp1720I GCTNAGC 3 cut(s) 84, 807, 1265
Bsp19I CCATGG 1 cut(s) 1722
BspANI GGCC 7 cut(s) 515, 529, 665, 1349, 1968, 2356, 2596
BspDI ATCGAT 1 cut(s) 1659
BspFNI CGCG 3 cut(s) 117, 345, 360
BspLI GGNNCC 6 cut(s) 894, 1030, 1228, 1732, 1759, 2096
BspMAI CTGCAG 1 cut(s) 312
BspPI GGATC 6 cut(s) 526, 887, 900, 1169, 1236, 2215
BspT104I TTCGAA 1 cut(s) 956
BspTNI GGTCTC 1 cut(s) 1087
BsrBI CCGCTC 2 cut(s) 223, 549
BsrFI RCCGGY 2 cut(s) 511, 734
BsrI ACTGG 7 cut(s) 704, 841, 1284, 1350, 1364, 1756, 2164
BssAI RCCGGY 2 cut(s) 511, 734
BssECI CCNNGG 7 cut(s) 64, 210, 1215, 1722, 1797, 2114, 2357
BssHII GCGCGC 1 cut(s) 343
BssMI GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
BssNI GRCGYC 2 cut(s) 384, 1257
BssT1I CCWWGG 5 cut(s) 64, 210, 1722, 2114, 2357
Bst2UI CCWGG 3 cut(s) 1098, 2353, 2493
Bst4CI ACNGT 6 cut(s) 74, 80, 1511, 1781, 1801, 1921
Bst6I CTCTTC 1 cut(s) 702
BstACI GRCGYC 2 cut(s) 384, 1257
BstAPI GCANNNNNTGC 1 cut(s) 938
BstBI TTCGAA 1 cut(s) 956
BstC8I GCNNGC 8 cut(s) 42, 225, 345, 637, 740, 1987, 2307, 2403
BstDSI CCRYGG 2 cut(s) 1722, 1797
BstF5I GGATG 9 cut(s) 28, 124, 481, 1532, 1706, 1808, 2348, 2369, 2573
BstFNI CGCG 3 cut(s) 117, 345, 360
BstH2I RGCGCY 1 cut(s) 2517
BstHHI GCGC 5 cut(s) 345, 347, 362, 2369, 2516
BstKTI GATC 7 cut(s) 521, 895, 1177, 1244, 2111, 2223, 2554
BstMAI GTCTC 1 cut(s) 1087
BstMBI GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
BstMCI CGRYCG 1 cut(s) 516
BstNI CCWGG 3 cut(s) 1098, 2353, 2493
BstNSI RCATGY 3 cut(s) 742, 1127, 2405
BstSCI CCNGG 5 cut(s) 1096, 1214, 1215, 2351, 2491
BstSFI CTRYAG 1 cut(s) 308
BstSLI GKGCMC 1 cut(s) 2257
BstUI CGCG 3 cut(s) 117, 345, 360
BstV1I GCAGC 9 cut(s) 294, 322, 450, 599, 913, 925, 1117, 1933, 2001
BstV2I GAAGAC 3 cut(s) 577, 759, 1485
BstX2I RGATCY 3 cut(s) 892, 1241, 2220
BstYI RGATCY 3 cut(s) 892, 1241, 2220
BstZI CGGCCG 1 cut(s) 513
Bsu15I ATCGAT 1 cut(s) 1659
BsuRI GGCC 7 cut(s) 515, 529, 665, 1349, 1968, 2356, 2596
BsuTUI ATCGAT 1 cut(s) 1659
BtgI CCRYGG 2 cut(s) 1722, 1797
BtgZI GCGATG 1 cut(s) 132
BtrI CACGTC 1 cut(s) 1764
BtsCI GGATG 9 cut(s) 28, 124, 481, 1532, 1706, 1808, 2348, 2369, 2573
BtsI GCAGTG 3 cut(s) 939, 1987, 1999
BtsIMutI CAGTG 7 cut(s) 85, 729, 939, 1631, 1987, 1999, 2157
Cac8I GCNNGC 8 cut(s) 42, 225, 345, 637, 740, 1987, 2307, 2403
CaiI CAGNNNCTG 2 cut(s) 938, 1925
CfoI GCGC 5 cut(s) 345, 347, 362, 2369, 2516
Cfr10I RCCGGY 2 cut(s) 511, 734
Cfr9I CCCGGG 1 cut(s) 1215
ClaI ATCGAT 1 cut(s) 1659
CseI GACGC 5 cut(s) 373, 512, 582, 708, 1246
CsiI ACCWGGT 1 cut(s) 1096
Csp6I GTAC 1 cut(s) 1287
CviQI GTAC 1 cut(s) 1287
DpnI GATC 7 cut(s) 520, 894, 1176, 1243, 2110, 2222, 2553
DpnII GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
DrdI GACNNNNNNGTC 1 cut(s) 1279
DseDI GACNNNNNNGTC 1 cut(s) 1279
EaeI YGGCCR 4 cut(s) 513, 663, 1347, 1966
EagI CGGCCG 1 cut(s) 513
Eam1104I CTCTTC 1 cut(s) 702
EarI CTCTTC 1 cut(s) 702
EciI GGCGGA 1 cut(s) 287
Ecl136II GAGCTC 1 cut(s) 781
EclXI CGGCCG 1 cut(s) 513
Eco130I CCWWGG 5 cut(s) 64, 210, 1722, 2114, 2357
Eco147I AGGCCT 1 cut(s) 2356
Eco24I GRGCYC 1 cut(s) 783
Eco31I GGTCTC 1 cut(s) 1087
Eco47I GGWCC 9 cut(s) 31, 214, 281, 839, 1370, 1619, 1688, 1758, 2345
Eco52I CGGCCG 1 cut(s) 513
Eco53kI GAGCTC 1 cut(s) 781
Eco57I CTGAAG 3 cut(s) 87, 120, 1467
Eco88I CYCGRG 2 cut(s) 524, 1215
EcoICRI GAGCTC 1 cut(s) 781
EcoO109I RGGNCCY 1 cut(s) 1619
EcoRII CCWGG 3 cut(s) 1096, 2351, 2491
EcoT14I CCWWGG 5 cut(s) 64, 210, 1722, 2114, 2357
EcoT38I GRGCYC 1 cut(s) 783
ErhI CCWWGG 5 cut(s) 64, 210, 1722, 2114, 2357
FalI AAGNNNNNCTT 6 cut(s) 270, 302, 1694, 1726, 2500, 2532
FaqI GGGAC 3 cut(s) 847, 1156, 1370
FauI CCCGC 2 cut(s) 216, 757
FbaI TGATCA 1 cut(s) 2551
FblI GTMKAC 1 cut(s) 2044
FokI GGATG 9 cut(s) 35, 111, 488, 1539, 1693, 1795, 2335, 2376, 2580
FriOI GRGCYC 1 cut(s) 783
FspBI CTAG 3 cut(s) 1034, 2298, 2310
GlaI GCGC 5 cut(s) 344, 346, 361, 2368, 2515
GsaI CCCAGC 2 cut(s) 1584, 1929
GsuI CTGGAG 2 cut(s) 1620, 1996
HaeII RGCGCY 1 cut(s) 2517
HaeIII GGCC 7 cut(s) 515, 529, 665, 1349, 1968, 2356, 2596
HapII CCGG 6 cut(s) 512, 516, 530, 735, 1216, 1245
HgaI GACGC 5 cut(s) 373, 512, 582, 708, 1246
HhaI GCGC 5 cut(s) 345, 347, 362, 2369, 2516
Hin1I GRCGYC 2 cut(s) 384, 1257
Hin6I GCGC 5 cut(s) 343, 345, 360, 2367, 2514
HinP1I GCGC 5 cut(s) 343, 345, 360, 2367, 2514
HincII GTYRAC 3 cut(s) 496, 1060, 2045
HindII GTYRAC 3 cut(s) 496, 1060, 2045
HindIII AAGCTT 1 cut(s) 99
HpaII CCGG 6 cut(s) 512, 516, 530, 735, 1216, 1245
HphI GGTGA 6 cut(s) 86, 501, 674, 1204, 1543, 2103
Hpy166II GTNNAC 7 cut(s) 496, 682, 1060, 1103, 1629, 1761, 2045
Hpy188III TCNNGA 7 cut(s) 1172, 1239, 1373, 1422, 1745, 1934, 2298
Hpy8I GTNNAC 7 cut(s) 496, 682, 1060, 1103, 1629, 1761, 2045
Hpy99I CGWCG 3 cut(s) 656, 1262, 2130
HpyAV CCTTC 7 cut(s) 22, 139, 144, 640, 790, 1428, 2384
HpyCH4III ACNGT 6 cut(s) 74, 80, 1511, 1781, 1801, 1921
HpyCH4IV ACGT 2 cut(s) 668, 1763
HpySE526I ACGT 2 cut(s) 668, 1763
Hsp92I GRCGYC 2 cut(s) 384, 1257
HspAI GCGC 5 cut(s) 343, 345, 360, 2367, 2514
Ksp22I TGATCA 1 cut(s) 2551
Kzo9I GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
LmnI GCTCC 7 cut(s) 263, 778, 1120, 1977, 2203, 2410, 2558
Lsp1109I GCAGC 9 cut(s) 294, 322, 450, 599, 913, 925, 1117, 1933, 2001
LweI GCATC 7 cut(s) 994, 1006, 1577, 1817, 1933, 2354, 2558
MabI ACCWGGT 1 cut(s) 1096
MaeI CTAG 3 cut(s) 1034, 2298, 2310
MaeII ACGT 2 cut(s) 668, 1763
MaeIII GTNAC 7 cut(s) 68, 74, 443, 592, 767, 1338, 2231
MalI GATC 7 cut(s) 520, 894, 1176, 1243, 2110, 2222, 2553
MbiI CCGCTC 2 cut(s) 223, 549
MboI GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
MboII GAAGA 7 cut(s) 579, 582, 719, 764, 1460, 1485, 2230
MflI RGATCY 3 cut(s) 892, 1241, 2220
MhlI GDGCHC 4 cut(s) 55, 268, 783, 2257
MlsI TGGCCA 1 cut(s) 1968
MluNI TGGCCA 1 cut(s) 1968
MlyI GAGTC 6 cut(s) 527, 1060, 1098, 1346, 2027, 2449
MmeI TCCRAC 3 cut(s) 798, 1006, 2545
Mox20I TGGCCA 1 cut(s) 1968
MscI TGGCCA 1 cut(s) 1968
MseI TTAA 5 cut(s) 162, 1080, 1592, 2433, 2604
MslI CAYNNNNRTG 3 cut(s) 737, 1473, 2535
Msp20I TGGCCA 1 cut(s) 1968
MspA1I CMGCKG 1 cut(s) 1974
MspI CCGG 6 cut(s) 512, 516, 530, 735, 1216, 1245
MspR9I CCNGG 5 cut(s) 1098, 1216, 1217, 2353, 2493
MvaI CCWGG 3 cut(s) 1098, 2353, 2493
MvnI CGCG 3 cut(s) 117, 345, 360
NciI CCSGG 2 cut(s) 1216, 1217
NcoI CCATGG 1 cut(s) 1722
NdeII GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
NlaIV GGNNCC 6 cut(s) 894, 1030, 1228, 1732, 1759, 2096
NmuCI GTSAC 5 cut(s) 68, 74, 592, 1338, 2231
NspI RCATGY 3 cut(s) 742, 1127, 2405
NspV TTCGAA 1 cut(s) 956
PaeI GCATGC 2 cut(s) 742, 2405
PalAI GGCGCGCC 1 cut(s) 343
PauI GCGCGC 1 cut(s) 343
PceI AGGCCT 1 cut(s) 2356
PcsI WCGNNNNNNNCGW 1 cut(s) 542
PfeI GAWTC 4 cut(s) 236, 1437, 1540, 1787
PflMI CCANNNNNTGG 3 cut(s) 1697, 2159, 2358
PleI GAGTC 6 cut(s) 527, 1060, 1098, 1345, 2026, 2448
PpsI GAGTC 6 cut(s) 527, 1060, 1098, 1345, 2026, 2448
PpuMI RGGWCCY 1 cut(s) 1619
PsiI TTATAA 1 cut(s) 1298
Psp124BI GAGCTC 1 cut(s) 783
Psp5II RGGWCCY 1 cut(s) 1619
Psp6I CCWGG 3 cut(s) 1096, 2351, 2491
PspFI CCCAGC 2 cut(s) 1580, 1925
PspGI CCWGG 3 cut(s) 1096, 2351, 2491
PspN4I GGNNCC 6 cut(s) 894, 1030, 1228, 1732, 1759, 2096
PspPPI RGGWCCY 1 cut(s) 1619
PstI CTGCAG 1 cut(s) 312
PstNI CAGNNNCTG 2 cut(s) 938, 1925
PsuI RGATCY 3 cut(s) 892, 1241, 2220
PteI GCGCGC 1 cut(s) 343
RsaI GTAC 1 cut(s) 1288
RsaNI GTAC 1 cut(s) 1287
RseI CAYNNNNRTG 3 cut(s) 737, 1473, 2535
SacI GAGCTC 1 cut(s) 783
SalI GTCGAC 1 cut(s) 2043
SaqAI TTAA 5 cut(s) 162, 1080, 1592, 2433, 2604
Sau3AI GATC 7 cut(s) 518, 892, 1174, 1241, 2108, 2220, 2551
SchI GAGTC 6 cut(s) 527, 1060, 1098, 1346, 2027, 2449
ScrFI CCNGG 5 cut(s) 1098, 1216, 1217, 2353, 2493
SduI GDGCHC 4 cut(s) 55, 268, 783, 2257
SexAI ACCWGGT 1 cut(s) 1096
SfaNI GCATC 7 cut(s) 994, 1006, 1577, 1817, 1933, 2354, 2558
SfcI CTRYAG 1 cut(s) 308
SfuI TTCGAA 1 cut(s) 956
SgsI GGCGCGCC 1 cut(s) 343
SinI GGWCC 9 cut(s) 31, 214, 281, 839, 1370, 1619, 1688, 1758, 2345
SmaI CCCGGG 1 cut(s) 1217
SmiMI CAYNNNNRTG 3 cut(s) 737, 1473, 2535
SmlI CTYRAG 1 cut(s) 1614
SmoI CTYRAG 1 cut(s) 1614
SphI GCATGC 2 cut(s) 742, 2405
SseBI AGGCCT 1 cut(s) 2356
SspMI CTAG 3 cut(s) 1034, 2298, 2310
SstI GAGCTC 1 cut(s) 783
StuI AGGCCT 1 cut(s) 2356
StyD4I CCNGG 5 cut(s) 1096, 1214, 1215, 2351, 2491
StyI CCWWGG 5 cut(s) 64, 210, 1722, 2114, 2357
TaaI ACNGT 6 cut(s) 74, 80, 1511, 1781, 1801, 1921
TaiI ACGT 2 cut(s) 671, 1766
TauI GCSGC 5 cut(s) 117, 486, 552, 932, 2514
TfiI GAWTC 4 cut(s) 236, 1437, 1540, 1787
Tru1I TTAA 5 cut(s) 162, 1080, 1592, 2433, 2604
Tru9I TTAA 5 cut(s) 162, 1080, 1592, 2433, 2604
TscAI CASTG 7 cut(s) 85, 729, 939, 1631, 1987, 1999, 2164
TseFI GTSAC 5 cut(s) 68, 74, 592, 1338, 2231
TseI GCWGC 9 cut(s) 307, 310, 438, 587, 926, 938, 1130, 1946, 1989
Tsp45I GTSAC 5 cut(s) 68, 74, 592, 1338, 2231
TspDTI ATGAA 9 cut(s) 123, 135, 504, 568, 588, 720, 1491, 1683, 1840
TspGWI ACGGA 2 cut(s) 32, 791
TspMI CCCGGG 1 cut(s) 1215
TspRI CASTG 7 cut(s) 85, 729, 939, 1631, 1987, 1999, 2164
Van91I CCANNNNNTGG 3 cut(s) 1697, 2159, 2358
VpaK11BI GGWCC 9 cut(s) 31, 214, 281, 839, 1370, 1619, 1688, 1758, 2345
XapI RAATTY 4 cut(s) 1740, 1937, 2034, 2486
XbaI TCTAGA 1 cut(s) 2297
XceI RCATGY 3 cut(s) 742, 1127, 2405
XcmI CCANNNNNNNNNTGG 1 cut(s) 2355
XmaI CCCGGG 1 cut(s) 1215
XmiI GTMKAC 1 cut(s) 2044
XspI CTAG 3 cut(s) 1034, 2298, 2310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.