Rmu_sc0007413.1_g000001

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007413.1
Physical Location & Seq
Reverse (-)
1 .. 4548
4548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007413.1_g000001.1.cds

Sequence Viewer

Length: 228 bp
atggacacggcggaggtggtgcagaaggtggtgttcgattcgggagaggcggcgacgatggtggaggggctgagggcgagttataggtctgggaagacgaggagctacgagtggagagtgtcgcagttgcagaagctggagaaggtgacggagtttcatgaacaggaaatcgttgaggccctccggtcggacctgtataaaccggaattcgaagccttcgttcaagag

Protein Analysis

76

Amino Acids

8.83

Weight (kDa)

4.88

Isoelectric Point (pI)

42.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 11, 50
AcsI RAATTY 1 cut(s) 206
AfiI CCNNNNNNNGG 1 cut(s) 187
AgsI TTSAA 1 cut(s) 224
AluBI AGCT 2 cut(s) 105, 136
AluI AGCT 2 cut(s) 105, 136
AlwNI CAGNNNCTG 1 cut(s) 136
AoxI GGCC 1 cut(s) 177
ApoI RAATTY 1 cut(s) 206
AspS9I GGNCC 2 cut(s) 178, 190
AsuHPI GGTGA 1 cut(s) 157
AsuII TTCGAA 1 cut(s) 210
AvaII GGWCC 1 cut(s) 190
BbsI GAAGAC 1 cut(s) 101
BbvCI CCTCAGC 1 cut(s) 71
BccI CCATC 1 cut(s) 52
BceAI ACGGC 1 cut(s) 24
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
Bme18I GGWCC 1 cut(s) 190
BmgT120I GGNCC 2 cut(s) 178, 190
BpiI GAAGAC 1 cut(s) 101
BpmI CTGGAG 1 cut(s) 158
Bpu10I CCTNAGC 1 cut(s) 71
Bpu14I TTCGAA 1 cut(s) 210
BsaWI WCCGGW 2 cut(s) 183, 202
Bsc4I CCNNNNNNNGG 1 cut(s) 187
BseLI CCNNNNNNNGG 1 cut(s) 187
BseMII CTCAG 1 cut(s) 62
BseRI GAGGAG 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 41
Bsh1285I CGRYCG 1 cut(s) 188
BshFI GGCC 1 cut(s) 179
BsiEI CGRYCG 1 cut(s) 188
BsiSI CCGG 2 cut(s) 184, 203
BslI CCNNNNNNNGG 1 cut(s) 187
BsnI GGCC 1 cut(s) 179
Bsp119I TTCGAA 1 cut(s) 210
BspACI CCGC 2 cut(s) 11, 50
BspANI GGCC 1 cut(s) 179
BspCNI CTCAG 1 cut(s) 63
BspHI TCATGA 1 cut(s) 157
BspT104I TTCGAA 1 cut(s) 210
BstBI TTCGAA 1 cut(s) 210
BstDEI CTNAG 1 cut(s) 71
BstMCI CGRYCG 1 cut(s) 188
BstV2I GAAGAC 1 cut(s) 101
BsuRI GGCC 1 cut(s) 179
CaiI CAGNNNCTG 1 cut(s) 136
CciI TCATGA 1 cut(s) 157
Cfr13I GGNCC 2 cut(s) 178, 190
CviAII CATG 1 cut(s) 158
CviJI RGCY 5 cut(s) 70, 105, 136, 179, 215
CviKI_1 RGCY 5 cut(s) 70, 105, 136, 179, 215
DdeI CTNAG 1 cut(s) 71
EciI GGCGGA 1 cut(s) 26
Eco47I GGWCC 1 cut(s) 190
EcoO109I RGGNCCY 1 cut(s) 178
EcoRI GAATTC 1 cut(s) 206
FaeI CATG 1 cut(s) 161
FaiI YATR 3 cut(s) 84, 159, 198
FatI CATG 1 cut(s) 157
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
GluI GCNGC 1 cut(s) 51
GsuI CTGGAG 1 cut(s) 158
HaeIII GGCC 1 cut(s) 179
HapII CCGG 2 cut(s) 184, 203
Hin1II CATG 1 cut(s) 161
HinfI GANTC 1 cut(s) 38
HpaII CCGG 2 cut(s) 184, 203
HphI GGTGA 1 cut(s) 157
Hpy188I TCNGA 1 cut(s) 190
Hpy188III TCNNGA 3 cut(s) 42, 158, 224
Hpy99I CGWCG 1 cut(s) 58
HpyAV CCTTC 3 cut(s) 19, 136, 226
HpyCH4V TGCA 2 cut(s) 22, 130
HpyF3I CTNAG 1 cut(s) 71
Hsp92II CATG 1 cut(s) 161
LmnI GCTCC 1 cut(s) 102
LpnPI CCDG 6 cut(s) 75, 122, 149, 197, 206, 216
MaeIII GTNAC 1 cut(s) 145
MboII GAAGA 1 cut(s) 106
MluCI AATT 1 cut(s) 206
MmeI TCCRAC 1 cut(s) 168
MnlI CCTC 7 cut(s) 7, 40, 58, 66, 93, 169, 191
MspI CCGG 2 cut(s) 184, 203
NlaIII CATG 1 cut(s) 161
NmuCI GTSAC 1 cut(s) 145
NspV TTCGAA 1 cut(s) 210
PagI TCATGA 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 216
PfeI GAWTC 1 cut(s) 38
PkrI GCNGC 1 cut(s) 52
PspPI GGNCC 2 cut(s) 178, 190
PstNI CAGNNNCTG 1 cut(s) 136
SatI GCNGC 1 cut(s) 51
Sau96I GGNCC 2 cut(s) 178, 190
SetI ASST 7 cut(s) 18, 30, 89, 107, 138, 147, 195
SfuI TTCGAA 1 cut(s) 210
SinI GGWCC 1 cut(s) 190
Sse9I AATT 1 cut(s) 206
SsiI CCGC 2 cut(s) 11, 50
TaqI TCGA 2 cut(s) 36, 210
TasI AATT 1 cut(s) 206
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 1 cut(s) 38
TseFI GTSAC 1 cut(s) 145
Tsp45I GTSAC 1 cut(s) 145
TspDTI ATGAA 2 cut(s) 146, 174
TspGWI ACGGA 1 cut(s) 164
VpaK11BI GGWCC 1 cut(s) 190
XapI RAATTY 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.