Zein-binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16720 |
| fragaria_vesca | FvH4_1g28750 FvH4_1g28751 |
| malus_domestica | MD09G1263700.v1.1 MD17G1258500.v1.1 MD17G1259000.v1.1 |
| prunus_persica | Prupe.3G161200_v2.0.a1 Prupe.3G161200_v2.0.a1 Prupe.3G161200_v2.0.a1 Prupe.3G161200_v2.0.a1 |
| pyrus_communis | pycom09g17760 pycom17g26040 |
| rosa_chinensis | RchiOBHm_Chr3g0493141 |
| rosa_laevigata | RLG00000022726 |
| rosa_multiflora | Rmu_sc0008162.1_g000002 Rmu_sc0013424.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00391780 |
| rosa_rugosa | Rorug03G0259400 |
| rosa_samantha | Rh3AG308300 Rh3BG344500 Rh3CG341600 Rh3DG343800 |
| rosa_wichuraiana | Rw0G002840 Rw0G018330 Rw3G027120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 2348, 2603 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1624 |
| AciI | CCGC | 2 cut(s) | 1395, 2575 |
| AclWI | GGATC | 5 cut(s) | 211, 1106, 2127, 2472, 2529 |
| AcoI | YGGCCR | 2 cut(s) | 957, 1143 |
| AcsI | RAATTY | 3 cut(s) | 328, 1137, 1885 |
| AcuI | CTGAAG | 1 cut(s) | 2373 |
| AfaI | GTAC | 4 cut(s) | 659, 1273, 1430, 2218 |
| AfeI | AGCGCT | 1 cut(s) | 1564 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 58, 1624, 1912, 2324 |
| AflII | CTTAAG | 2 cut(s) | 574, 941 |
| AflIII | ACRYGT | 1 cut(s) | 174 |
| AjnI | CCWGG | 4 cut(s) | 20, 149, 1815, 2094 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2273, 2305 |
| Alw21I | GWGCWC | 2 cut(s) | 174, 1527 |
| Alw26I | GTCTC | 3 cut(s) | 257, 554, 573 |
| AlwI | GGATC | 5 cut(s) | 211, 1106, 2127, 2472, 2529 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1610 |
| Aor51HI | AGCGCT | 1 cut(s) | 1564 |
| AoxI | GGCC | 3 cut(s) | 130, 957, 1143 |
| ApoI | RAATTY | 3 cut(s) | 328, 1137, 1885 |
| AseI | ATTAAT | 1 cut(s) | 2589 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1888 |
| AspLEI | GCGC | 2 cut(s) | 1565, 1927 |
| AsuC2I | CCSGG | 1 cut(s) | 2552 |
| AsuHPI | GGTGA | 1 cut(s) | 2425 |
| AxyI | CCTNAGG | 1 cut(s) | 1374 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2200, 2233 |
| BalI | TGGCCA | 1 cut(s) | 959 |
| BanII | GRGCYC | 1 cut(s) | 1527 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 879, 911, 1873, 1905 |
| Bbv12I | GWGCWC | 2 cut(s) | 174, 1527 |
| BbvCI | CCTCAGC | 1 cut(s) | 2337 |
| BccI | CCATC | 9 cut(s) | 340, 401, 550, 636, 949, 1463, 1663, 1690, 2512 |
| BceAI | ACGGC | 1 cut(s) | 1130 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2378, 2412 |
| BciT130I | CCWGG | 4 cut(s) | 22, 151, 1817, 2096 |
| BclI | TGATCA | 3 cut(s) | 105, 823, 1717 |
| BcnI | CCSGG | 1 cut(s) | 2552 |
| BcoDI | GTCTC | 3 cut(s) | 257, 554, 573 |
| BfmI | CTRYAG | 6 cut(s) | 406, 588, 1602, 1900, 2212, 2610 |
| BfoI | RGCGCY | 1 cut(s) | 1566 |
| BfrI | CTTAAG | 2 cut(s) | 574, 941 |
| BfuAI | ACCTGC | 2 cut(s) | 2348, 2603 |
| BglII | AGATCT | 1 cut(s) | 202 |
| BmcAI | AGTACT | 1 cut(s) | 659 |
| Bme1390I | CCNGG | 5 cut(s) | 22, 151, 1817, 2096, 2552 |
| BmiI | GGNNCC | 1 cut(s) | 183 |
| BmrFI | CCNGG | 5 cut(s) | 22, 151, 1817, 2096, 2552 |
| BmrI | ACTGGG | 1 cut(s) | 251 |
| BmsI | GCATC | 4 cut(s) | 964, 1607, 1912, 2173 |
| BmuI | ACTGGG | 1 cut(s) | 251 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2159, 2191, 2189, 2221 |
| BpmI | CTGGAG | 1 cut(s) | 1035 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2337 |
| BpuEI | CTTGAG | 2 cut(s) | 1314, 1962 |
| BpuMI | CCSGG | 1 cut(s) | 2552 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1962 |
| BsaJI | CCNNGG | 4 cut(s) | 20, 149, 960, 2298 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1491, 1521 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 58, 1624, 1912, 2324 |
| Bse1I | ACTGG | 2 cut(s) | 246, 273 |
| Bse21I | CCTNAGG | 1 cut(s) | 1374 |
| Bse3DI | GCAATG | 4 cut(s) | 359, 1668, 1676, 2406 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1962 |
| BseBI | CCWGG | 4 cut(s) | 22, 151, 1817, 2096 |
| BseDI | CCNNGG | 4 cut(s) | 20, 149, 960, 2298 |
| BseGI | GGATG | 6 cut(s) | 351, 1963, 2188, 2523, 2569, 2608 |
| BseJI | GATNNNNATC | 1 cut(s) | 1962 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 58, 1624, 1912, 2324 |
| BseMI | GCAATG | 4 cut(s) | 359, 1668, 1676, 2406 |
| BseMII | CTCAG | 8 cut(s) | 213, 356, 470, 699, 1365, 1701, 2192, 2328 |
| BseNI | ACTGG | 2 cut(s) | 246, 273 |
| BseRI | GAGGAG | 4 cut(s) | 65, 426, 2468, 2471 |
| BshFI | GGCC | 3 cut(s) | 132, 959, 1145 |
| BsiHKAI | GWGCWC | 2 cut(s) | 174, 1527 |
| BsiSI | CCGG | 1 cut(s) | 2551 |
| BslFI | GGGAC | 2 cut(s) | 3, 132 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 58, 1624, 1912, 2324 |
| BsmAI | GTCTC | 3 cut(s) | 257, 554, 573 |
| BsmFI | GGGAC | 2 cut(s) | 3, 132 |
| BsmI | GAATGC | 2 cut(s) | 1988, 2067 |
| BsnI | GGCC | 3 cut(s) | 132, 959, 1145 |
| Bsp1286I | GDGCHC | 2 cut(s) | 174, 1527 |
| Bsp1407I | TGTACA | 1 cut(s) | 1428 |
| Bsp19I | CCATGG | 1 cut(s) | 2298 |
| BspACI | CCGC | 2 cut(s) | 1395, 2575 |
| BspANI | GGCC | 3 cut(s) | 132, 959, 1145 |
| BspCNI | CTCAG | 8 cut(s) | 212, 357, 469, 700, 1366, 1702, 2191, 2329 |
| BspHI | TCATGA | 4 cut(s) | 820, 826, 1848, 2239 |
| BspLI | GGNNCC | 1 cut(s) | 183 |
| BspMAI | CTGCAG | 5 cut(s) | 410, 592, 1606, 1904, 2614 |
| BspMI | ACCTGC | 2 cut(s) | 2348, 2603 |
| BspPI | GGATC | 5 cut(s) | 211, 1106, 2127, 2472, 2529 |
| BspQI | GCTCTTC | 1 cut(s) | 1515 |
| BspTI | CTTAAG | 2 cut(s) | 574, 941 |
| BsrDI | GCAATG | 4 cut(s) | 359, 1668, 1676, 2406 |
| BsrGI | TGTACA | 1 cut(s) | 1428 |
| BsrI | ACTGG | 2 cut(s) | 246, 273 |
| BssECI | CCNNGG | 4 cut(s) | 20, 149, 960, 2298 |
| BssT1I | CCWWGG | 2 cut(s) | 960, 2298 |
| Bst2UI | CCWGG | 4 cut(s) | 22, 151, 1817, 2096 |
| Bst4CI | ACNGT | 5 cut(s) | 251, 602, 662, 1262, 2216 |
| Bst6I | CTCTTC | 7 cut(s) | 2, 1125, 1374, 1515, 1581, 1644, 2094 |
| BstAFI | CTTAAG | 2 cut(s) | 574, 941 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1610 |
| BstAUI | TGTACA | 1 cut(s) | 1428 |
| BstC8I | GCNNGC | 3 cut(s) | 1254, 2089, 2540 |
| BstDSI | CCRYGG | 1 cut(s) | 2298 |
| BstEII | GGTNACC | 1 cut(s) | 2413 |
| BstF5I | GGATG | 6 cut(s) | 351, 1963, 2188, 2523, 2569, 2608 |
| BstH2I | RGCGCY | 1 cut(s) | 1566 |
| BstHHI | GCGC | 2 cut(s) | 1565, 1927 |
| BstMAI | GTCTC | 3 cut(s) | 257, 554, 573 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 414, 546, 1055, 1541, 1562, 1610, 2300 |
| BstNI | CCWGG | 4 cut(s) | 22, 151, 1817, 2096 |
| BstNSI | RCATGY | 2 cut(s) | 178, 1354 |
| BstPI | GGTNACC | 1 cut(s) | 2413 |
| BstSCI | CCNGG | 5 cut(s) | 20, 149, 1815, 2094, 2550 |
| BstSFI | CTRYAG | 6 cut(s) | 406, 588, 1602, 1900, 2212, 2610 |
| BstX2I | RGATCY | 3 cut(s) | 202, 216, 2521 |
| BstYI | RGATCY | 3 cut(s) | 202, 216, 2521 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1374 |
| BsuRI | GGCC | 3 cut(s) | 132, 959, 1145 |
| BtgI | CCRYGG | 1 cut(s) | 2298 |
| BtsCI | GGATG | 6 cut(s) | 351, 1963, 2188, 2523, 2569, 2608 |
| BtsI | GCAGTG | 3 cut(s) | 489, 1044, 1223 |
| BtsIMutI | CAGTG | 5 cut(s) | 489, 1044, 1077, 1223, 1267 |
| BveI | ACCTGC | 2 cut(s) | 2348, 2603 |
| Cac8I | GCNNGC | 3 cut(s) | 1254, 2089, 2540 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1610 |
| CciI | TCATGA | 4 cut(s) | 820, 826, 1848, 2239 |
| CfoI | GCGC | 2 cut(s) | 1565, 1927 |
| Csp6I | GTAC | 4 cut(s) | 658, 1272, 1429, 2217 |
| CviQI | GTAC | 4 cut(s) | 658, 1272, 1429, 2217 |
| EaeI | YGGCCR | 2 cut(s) | 957, 1143 |
| Eam1104I | CTCTTC | 7 cut(s) | 2, 1125, 1374, 1515, 1581, 1644, 2094 |
| EarI | CTCTTC | 7 cut(s) | 2, 1125, 1374, 1515, 1581, 1644, 2094 |
| Ecl136II | GAGCTC | 1 cut(s) | 1525 |
| Eco130I | CCWWGG | 2 cut(s) | 960, 2298 |
| Eco24I | GRGCYC | 1 cut(s) | 1527 |
| Eco32I | GATATC | 1 cut(s) | 234 |
| Eco47III | AGCGCT | 1 cut(s) | 1564 |
| Eco53kI | GAGCTC | 1 cut(s) | 1525 |
| Eco57I | CTGAAG | 1 cut(s) | 2373 |
| Eco81I | CCTNAGG | 1 cut(s) | 1374 |
| Eco91I | GGTNACC | 1 cut(s) | 2413 |
| EcoICRI | GAGCTC | 1 cut(s) | 1525 |
| EcoO65I | GGTNACC | 1 cut(s) | 2413 |
| EcoRII | CCWGG | 4 cut(s) | 20, 149, 1815, 2094 |
| EcoRV | GATATC | 1 cut(s) | 234 |
| EcoT14I | CCWWGG | 2 cut(s) | 960, 2298 |
| EcoT22I | ATGCAT | 1 cut(s) | 2406 |
| EcoT38I | GRGCYC | 1 cut(s) | 1527 |
| ErhI | CCWWGG | 2 cut(s) | 960, 2298 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1540, 1572 |
| FaqI | GGGAC | 2 cut(s) | 3, 132 |
| FbaI | TGATCA | 3 cut(s) | 105, 823, 1717 |
| FokI | GGATG | 6 cut(s) | 358, 1970, 2195, 2530, 2576, 2615 |
| FriOI | GRGCYC | 1 cut(s) | 1527 |
| GlaI | GCGC | 2 cut(s) | 1564, 1926 |
| GsuI | CTGGAG | 1 cut(s) | 1035 |
| HaeII | RGCGCY | 1 cut(s) | 1566 |
| HaeIII | GGCC | 3 cut(s) | 132, 959, 1145 |
| HapII | CCGG | 1 cut(s) | 2551 |
| HhaI | GCGC | 2 cut(s) | 1565, 1927 |
| Hin6I | GCGC | 2 cut(s) | 1563, 1925 |
| HinP1I | GCGC | 2 cut(s) | 1563, 1925 |
| HincII | GTYRAC | 2 cut(s) | 1075, 1339 |
| HindII | GTYRAC | 2 cut(s) | 1075, 1339 |
| HindIII | AAGCTT | 2 cut(s) | 1554, 2026 |
| HpaII | CCGG | 1 cut(s) | 2551 |
| HphI | GGTGA | 1 cut(s) | 2425 |
| Hpy166II | GTNNAC | 4 cut(s) | 535, 1075, 1339, 1370 |
| Hpy8I | GTNNAC | 4 cut(s) | 535, 1075, 1339, 1370 |
| HpyAV | CCTTC | 9 cut(s) | 399, 497, 677, 710, 714, 779, 1534, 1648, 2506 |
| HpyCH4III | ACNGT | 5 cut(s) | 251, 602, 662, 1262, 2216 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 414, 546, 1055, 1541, 1562, 1610, 2300 |
| HspAI | GCGC | 2 cut(s) | 1563, 1925 |
| Ksp22I | TGATCA | 3 cut(s) | 105, 823, 1717 |
| LguI | GCTCTTC | 1 cut(s) | 1515 |
| LmnI | GCTCC | 1 cut(s) | 1054 |
| LweI | GCATC | 4 cut(s) | 964, 1607, 1912, 2173 |
| MfeI | CAATTG | 1 cut(s) | 1942 |
| MflI | RGATCY | 3 cut(s) | 202, 216, 2521 |
| MhlI | GDGCHC | 2 cut(s) | 174, 1527 |
| MlsI | TGGCCA | 1 cut(s) | 959 |
| MluNI | TGGCCA | 1 cut(s) | 959 |
| MlyI | GAGTC | 2 cut(s) | 783, 2072 |
| MmeI | TCCRAC | 1 cut(s) | 159 |
| Mox20I | TGGCCA | 1 cut(s) | 959 |
| Mph1103I | ATGCAT | 1 cut(s) | 2406 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1888 |
| MscI | TGGCCA | 1 cut(s) | 959 |
| MseI | TTAA | 8 cut(s) | 575, 803, 861, 942, 1559, 2055, 2127, 2589 |
| MslI | CAYNNNNRTG | 4 cut(s) | 225, 825, 1120, 1263 |
| Msp20I | TGGCCA | 1 cut(s) | 959 |
| MspA1I | CMGCKG | 1 cut(s) | 2336 |
| MspCI | CTTAAG | 2 cut(s) | 574, 941 |
| MspI | CCGG | 1 cut(s) | 2551 |
| MspR9I | CCNGG | 5 cut(s) | 22, 151, 1817, 2096, 2552 |
| MunI | CAATTG | 1 cut(s) | 1942 |
| Mva1269I | GAATGC | 2 cut(s) | 1988, 2067 |
| MvaI | CCWGG | 4 cut(s) | 22, 151, 1817, 2096 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 414, 546, 1055, 1541, 1562, 1610, 2300 |
| NciI | CCSGG | 1 cut(s) | 2552 |
| NcoI | CCATGG | 1 cut(s) | 2298 |
| NlaIV | GGNNCC | 1 cut(s) | 183 |
| NmuCI | GTSAC | 4 cut(s) | 368, 1042, 1486, 2413 |
| NsiI | ATGCAT | 1 cut(s) | 2406 |
| NspI | RCATGY | 2 cut(s) | 178, 1354 |
| PagI | TCATGA | 4 cut(s) | 820, 826, 1848, 2239 |
| PciI | ACATGT | 1 cut(s) | 174 |
| PciSI | GCTCTTC | 1 cut(s) | 1515 |
| PctI | GAATGC | 2 cut(s) | 1988, 2067 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1888 |
| PfeI | GAWTC | 8 cut(s) | 275, 467, 745, 845, 1103, 1217, 1857, 2390 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1624 |
| PfoI | TCCNGGA | 3 cut(s) | 1815, 2094, 2550 |
| PleI | GAGTC | 2 cut(s) | 783, 2072 |
| PpsI | GAGTC | 2 cut(s) | 783, 2072 |
| PscI | ACATGT | 1 cut(s) | 174 |
| PshBI | ATTAAT | 1 cut(s) | 2589 |
| Psp124BI | GAGCTC | 1 cut(s) | 1527 |
| Psp6I | CCWGG | 4 cut(s) | 20, 149, 1815, 2094 |
| PspEI | GGTNACC | 1 cut(s) | 2413 |
| PspGI | CCWGG | 4 cut(s) | 20, 149, 1815, 2094 |
| PspN4I | GGNNCC | 1 cut(s) | 183 |
| PstI | CTGCAG | 5 cut(s) | 410, 592, 1606, 1904, 2614 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1610 |
| PsuI | RGATCY | 3 cut(s) | 202, 216, 2521 |
| PvuII | CAGCTG | 1 cut(s) | 2336 |
| RsaI | GTAC | 4 cut(s) | 659, 1273, 1430, 2218 |
| RsaNI | GTAC | 4 cut(s) | 658, 1272, 1429, 2217 |
| RseI | CAYNNNNRTG | 4 cut(s) | 225, 825, 1120, 1263 |
| SacI | GAGCTC | 1 cut(s) | 1527 |
| SapI | GCTCTTC | 1 cut(s) | 1515 |
| SaqAI | TTAA | 8 cut(s) | 575, 803, 861, 942, 1559, 2055, 2127, 2589 |
| ScaI | AGTACT | 1 cut(s) | 659 |
| SchI | GAGTC | 2 cut(s) | 783, 2072 |
| ScrFI | CCNGG | 5 cut(s) | 22, 151, 1817, 2096, 2552 |
| SduI | GDGCHC | 2 cut(s) | 174, 1527 |
| SfaNI | GCATC | 4 cut(s) | 964, 1607, 1912, 2173 |
| SfcI | CTRYAG | 6 cut(s) | 406, 588, 1602, 1900, 2212, 2610 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 225, 825, 1120, 1263 |
| SmlI | CTYRAG | 4 cut(s) | 574, 941, 1329, 1977 |
| SmoI | CTYRAG | 4 cut(s) | 574, 941, 1329, 1977 |
| SsiI | CCGC | 2 cut(s) | 1395, 2575 |
| SstI | GAGCTC | 1 cut(s) | 1527 |
| StyD4I | CCNGG | 5 cut(s) | 20, 149, 1815, 2094, 2550 |
| StyI | CCWWGG | 2 cut(s) | 960, 2298 |
| TaaI | ACNGT | 5 cut(s) | 251, 602, 662, 1262, 2216 |
| TaqI | TCGA | 3 cut(s) | 54, 604, 2196 |
| TatI | WGTACW | 2 cut(s) | 657, 1428 |
| TfiI | GAWTC | 8 cut(s) | 275, 467, 745, 845, 1103, 1217, 1857, 2390 |
| Tru1I | TTAA | 8 cut(s) | 575, 803, 861, 942, 1559, 2055, 2127, 2589 |
| Tru9I | TTAA | 8 cut(s) | 575, 803, 861, 942, 1559, 2055, 2127, 2589 |
| TscAI | CASTG | 5 cut(s) | 489, 1051, 1084, 1230, 1267 |
| TseFI | GTSAC | 4 cut(s) | 368, 1042, 1486, 2413 |
| Tsp45I | GTSAC | 4 cut(s) | 368, 1042, 1486, 2413 |
| TspRI | CASTG | 5 cut(s) | 489, 1051, 1084, 1230, 1267 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1624 |
| Vha464I | CTTAAG | 2 cut(s) | 574, 941 |
| VspI | ATTAAT | 1 cut(s) | 2589 |
| XapI | RAATTY | 3 cut(s) | 328, 1137, 1885 |
| XbaI | TCTAGA | 3 cut(s) | 161, 685, 1009 |
| XceI | RCATGY | 2 cut(s) | 178, 1354 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 147, 542, 1621 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1888 |
| ZrmI | AGTACT | 1 cut(s) | 659 |
| Zsp2I | ATGCAT | 1 cut(s) | 2406 |