Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010643.1

Orthogroup ID

OG0005249

Physical Location & Seq

Genomic Coordinates Forward (+)

5264 .. 17199

Gene Structure 11936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010643.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4242 bp

atggggtctcttactgtgtttcaattctatgatctgttcagaactgtaaagtgtgtcgaggaatatgagcaactcgtgtttcaattctatgatctgttcagaactgtaaagtgtgtcgaggaatatgagcaactcgcgcagccgcgcaagtcttgttctatatccaacaaattttgtggcaacagtttgcagaagccgaagccggccatggggtctcgtcggcccgttacagttgttccttgcgctgtactaaccacggatccgcattctgatcagcttgccgggaaatacaaccttgatggtaacattgaattgcaggtttatgttgatgcttcccctccagggtctgccactaaagtagaatttcaggtctcatatggcggtgactctttggttcttcattggggtgggataaaagatagaaaagaaaaatgggtgcttccttctcgccgcccagatggaaccaaagaatataagaagagagctcttagaactccttttgcgaaatctggctccaattccgtacttaaaattgagattgatgatcctgcaatacaagctatagagtttctcatagttgatgaaagtcagaacagatggtttaagaacaatggcggcaactttcatgttaagttaccttcgaaagagaagttgatatcaaatgtttcagttcctgaagatttagtgcaaattcaagcatatctgaggtgggagcgaaagggcaaacagatgtacacaccagagcaagagaaggtggagtatgaagcagcccgaactgagctattggaggaagtagccaggggtgcttccatagaagagctccaagcaaagctgactaagaaaactgatgctagtaacagtcaggaaccatctcatgctggtaacaaagaagtttccaaggccacaaagaaacatgagagtaaaaaggttttcagaactgaaagaattaagcggaagcaacgagatttaatgaagattctcaacaaacatgctactaaacctgtagatgaagctaaacttgcgcatgaagaatcaaagaaaccaaaagccttgaaagcagttgagctatttgccagggcaaaagaagaacaagatggtggttccgtcctgaacaaaacaatctacaggctcggtgataaggacctgctggtacttgtgacaaaggttgctgacaagataaaggttcatctggcaacagatatcaaagagccaattaacattcattgggctctatctgtaaacaaagctggagagtggttggaaccacctccaaatgtactgccccagggttcagtttctctaaatggggctgttgaaacacaatttgtatctagttctgttgattctacttatgaggttcaatctttagaaatagaaatgcaagaggaaagtttcaaaggaatgccatttgtcctttgttcttctggaaactggattaagaaccaaggctcagatttctatgctgactttggtgttgcggtcaagaaagttcagaaggatgctggtgatgggaaaggtactgcaaaggatttattggataaaatagcagatctggagagtgaggcgcaaaaatcctttatgcatcggtttaacattgcagcagacttgataaatcaagcaaaagatgctggcgaattaggtcttgctggtattctggtgtggatgaggtttatggctacgaggcagctgatttggaataaaaattacaatgtcaaaccacgtgagattagtaaagcacaggacaggctcacaggcttgctccagaatatttacacaagtcatccacagtatcgagagcttctacggatgatattgtctactgttggacgtggaggagaaggggatgtgggacagcgaattcgagatgagatccttgttatccagagaaactgtgattgtaagggggggatgatggaggaatggcatcaaaagttgcataataacactagcccagatgatgttgttatatgtcaggcactaattgattacatcaaaagtgactttgatattggtgtttactggaaaactttgaacaagaatggaattacaaaagaacgtcttctaagctatgaccgtgcaatccacaatgaaccaagtttcagggcagatcagaaagagcgtcttctgcatgatctggggaactacatgagaactttaaaggaagttcactcaggtgcagatcttgagtctgccatcacaaattgtttgggttacagtgctcagggtcaaggcttcatggttggagtacaaataaatcctgtatctggcctgccctctgaagttccaggactgctgcaacttgtaatggaacatgttgaggacaagaatgtggaagtccttattgagggtttgcttgaggctcgtcaggagctgtggccgttgctctctaagcctaatgatcgcctgaaggatctcttatttttggacattgcccttgattctactgtgagaaccgccattgagaggggatatgaagaactgaataatgctgggccggagaaaattatgtacttcatctcaatggttctagaaaacctggcattatcatcagatgataatgaggatctcatctactgtttgaagggatggaatcatgcgttaaacatgttaaagagtaataccgataactgggcattatatgcaaaatcaatcctagacagaacccggctggcgcttgcaaacaaggcagagtcgtatcacagtattttacagccatcagcagagtaccttggatcaaagcttggagtggaccaatgggctttgagcatatttactgaagaagttatccgtgctggatcagctgcctctttgtccgcactcgttaatcgacttgatccagttcttcggaagactgctaatttgggaagttggcaggttatcagcccagttgaagtggttggatatgttgtagttgtggacgagttgctcactgtccagaataaagtatatgagaagccgactattttggtggcaagaagtgtgagaggtgaggaagaaattccagatggcacagttgctgtgctaacacctgatatgccagacgtcctatctcatgtttctgtccgagcaagaaatagcaaggtttgttttgcgacatgttttgactccaatattctagctgacctccaagcttgtaaagggaagttattgcgtgtaaagccaactcctgctgatgtagtttatagcgaggttaatgagaatgagctaggagatgcaagttcaactaattcaaatgaagacatcccagctctgacattagtgaagaaacagtttacgggtagatatgccatatcatctgatgagttcacaagtgaaatggttggagctaaatcacgtaatatttcttatataaaaggaaaactgccctcttgggttggaattcctacatcagttgccctaccatttggagtatttgaaaaagttctttctgaagattcaaataaggctgttgctgacaagttagaaattctaaagaaaaagttaaaagaaggagattttggttcacttggggagattcgagagacagttttacagttgacagcaccacccccgttggtgcaagagctgaagactaagatgcaaagttcaggaatgccttggcctggtgatgagggtgaacaacgatgggaacaagcatggttggctataaaaaaggtctgggcttcaaagtggaatgagagagcatacttcagcacaagaaaagtgaaattagaccatgattatctttgcatggctgtccttgttcaagaaataataaatgccgactatgcattcgttattcacacaactaacccatcttcaggagactcgtcggagatatatgctgaggttgtcaaaggtcttggagaaaccttagttggagcttatcctggacgtgctttaagttttattagcaagaaaaacgctctggactctcctcaggtgttaggttaccctagcaaaccgattggcctctttatcagacagtccataatcttccgatccgattccaatggtgaagatcttgaaggttatgctggtgcaggcctttatgacagtgtgcctatggatgcggaagaggaagtcgtgcttgactactcatctgacccactcattactgatgggaacttccaaaagacaattctgtccagcattgctcgcgcaggaagtgcaatcgaggagttatatggatcagcacaagacatcgaaggtgtgatcagagatgggaaactctatgttgtccagacaagaccccagatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009631 GO:0009941 GO:0009987 GO:0016052 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016781 GO:0031967 GO:0031975 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050521 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPDK_N

Protein Analysis

1413

Amino Acids

157.7

Weight (kDa)

5.81

Isoelectric Point (pI)

41.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10760 AT1G10760 AT1G10760
fragaria_vesca	FvH4_4g25800 FvH4_4g25800 FvH4_4g25800 FvH4_4g25800
malus_domestica	MD13G1096800.v1.1 MD16G1097800.v1.1
prunus_persica	Prupe.1G248900_v2.0.a1 Prupe.1G248900_v2.0.a1 Prupe.1G248900_v2.0.a1 Prupe.1G248900_v2.0.a1 Prupe.1G248900_v2.0.a1
pyrus_communis	pycom13g08450 pycom16g08330
rosa_chinensis	RchiOBHm_Chr4g0433251
rosa_laevigata	RLG00000006771
rosa_multiflora	Rmu_co8055492.1_g000001 Rmu_sc0010643.1_g000001
rosa_roxburghii	Rroxscaffold_5G00374810
rosa_rugosa	Rorug04G0267200 Rorug04G0267300 Rorug04G0267400 Rorug04G0267400
rosa_samantha	Rh4AG321900 Rh4BG329300 Rh4CG344600
rosa_wichuraiana	Rw4G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	4123
AatII	GACGTC	1 cut(s)	3045
Acc16I	TGCGCA	1 cut(s)	1023
Acc36I	ACCTGC	3 cut(s)	307, 1152, 2863
AccI	GTMKAC	1 cut(s)	1817
AccII	CGCG	3 cut(s)	137, 145, 4140
AcoI	YGGCCR	2 cut(s)	204, 2375
AcsI	RAATTY	7 cut(s)	170, 362, 690, 1857, 2997, 3378, 3465
AcuI	CTGAAG	8 cut(s)	696, 2298, 2426, 2796, 3450, 3587, 3673, 3783
AcvI	CACGTG	1 cut(s)	1721
AcyI	GRCGYC	1 cut(s)	3042
AfaI	GTAC	9 cut(s)	249, 525, 734, 1152, 1278, 1519, 2247, 2510, 2726
AfiI	CCNNNNNNNGG	8 cut(s)	209, 342, 2264, 2344, 2463, 2628, 3602, 3800
AflIII	ACRYGT	3 cut(s)	2311, 2604, 3095
AjiI	CACGTC	2 cut(s)	1829, 3875
AjnI	CCWGG	8 cut(s)	340, 797, 1073, 1284, 2284, 2535, 3601, 3868
AjuI	GAANNNNNNNTTGG	6 cut(s)	3480, 3512, 3840, 3872, 4104, 4136
AleI	CACNNNNGTG	1 cut(s)	2172
Alw21I	GWGCWC	3 cut(s)	487, 822, 2221
Alw26I	GTCTC	5 cut(s)	12, 219, 376, 3515, 3798
AlwNI	CAGNNNCTG	4 cut(s)	347, 674, 2371, 3017
AoxI	GGCC	9 cut(s)	204, 221, 900, 2266, 2375, 2492, 3599, 3949, 4024
ApeKI	GCWGC	6 cut(s)	139, 767, 1598, 1684, 2293, 2801
ApoI	RAATTY	7 cut(s)	170, 362, 690, 1857, 2997, 3378, 3465
ArsI	GACNNNNNNTTYG	6 cut(s)	1842, 1874, 2842, 2874, 3755, 3787
Asp700I	GAANNNNTTC	3 cut(s)	2058, 2997, 3420
AspLEI	GCGC	7 cut(s)	139, 147, 245, 1024, 1567, 2674, 4142
AspS9I	GGNCC	4 cut(s)	222, 1141, 2492, 2749
AsuC2I	CCSGG	2 cut(s)	283, 2665
AsuHPI	GGTGA	7 cut(s)	395, 1145, 1517, 2999, 3617, 3626, 4007
AsuII	TTCGAA	1 cut(s)	641
AvaII	GGWCC	2 cut(s)	1141, 2749
AxyI	CCTNAGG	1 cut(s)	3918
BamHI	GGATCC	1 cut(s)	259
BanII	GRGCYC	3 cut(s)	487, 822, 1231
BauI	CACGAG	1 cut(s)	74
BbrPI	CACGTG	1 cut(s)	1721
BbsI	GAAGAC	5 cut(s)	2051, 2114, 2855, 3243, 3575
Bbv12I	GWGCWC	3 cut(s)	487, 822, 2221
BbvCI	CCTCAGC	1 cut(s)	3825
BbvI	GCAGC	6 cut(s)	151, 779, 1610, 1696, 2280, 2788
BceAI	ACGGC	1 cut(s)	2362
BciT130I	CCWGG	8 cut(s)	342, 799, 1075, 1286, 2286, 2537, 3603, 3870
BclI	TGATCA	2 cut(s)	271, 4194
BcnI	CCSGG	2 cut(s)	283, 2665
BcoDI	GTCTC	5 cut(s)	12, 219, 376, 3515, 3798
BfaI	CTAG	8 cut(s)	852, 1332, 1947, 2528, 2654, 3116, 3206, 3936
BfmI	CTRYAG	3 cut(s)	561, 1002, 1123
BfoI	RGCGCY	1 cut(s)	2675
BfuAI	ACCTGC	3 cut(s)	307, 1152, 2863
BglII	AGATCT	3 cut(s)	1549, 2179, 4000
BisI	GCNGC	9 cut(s)	140, 143, 451, 616, 768, 1599, 1685, 2294, 2802
BlsI	GCNGC	9 cut(s)	141, 144, 452, 617, 769, 1600, 1686, 2295, 2803
Bme18I	GGWCC	2 cut(s)	1141, 2749
BmgBI	CACGTC	2 cut(s)	1829, 3875
BmgT120I	GGNCC	4 cut(s)	222, 1141, 2492, 2749
BmiI	GGNNCC	6 cut(s)	261, 463, 514, 867, 1102, 1263
BmrI	ACTGGG	2 cut(s)	2638, 2879
BmsI	GCATC	9 cut(s)	319, 838, 1489, 1591, 1615, 1933, 3202, 3567, 4039
BmuI	ACTGGG	2 cut(s)	2638, 2879
BpiI	GAAGAC	5 cut(s)	2051, 2114, 2855, 3243, 3575
BpmI	CTGGAG	4 cut(s)	324, 1269, 1574, 1745
Bpu10I	CCTNAGC	2 cut(s)	2220, 3825
Bpu14I	TTCGAA	1 cut(s)	641
BpuEI	CTTGAG	2 cut(s)	2204, 2375
BpuMI	CCSGG	2 cut(s)	283, 2665
BsaAI	YACGTR	2 cut(s)	1721, 3335
BsaHI	GRCGYC	1 cut(s)	3042
BsaI	GGTCTC	3 cut(s)	12, 219, 376
Bsc4I	CCNNNNNNNGG	8 cut(s)	209, 342, 2264, 2344, 2463, 2628, 3602, 3800
Bse118I	RCCGGY	1 cut(s)	202
Bse1I	ACTGG	5 cut(s)	1436, 2024, 2633, 2837, 2885
Bse21I	CCTNAGG	1 cut(s)	3918
Bse3DI	GCAATG	3 cut(s)	1593, 2427, 4131
BseBI	CCWGG	8 cut(s)	342, 799, 1075, 1286, 2286, 2537, 3603, 3870
BseGI	GGATG	9 cut(s)	1504, 1668, 1780, 1812, 1849, 1914, 2591, 3240, 4054
BseLI	CCNNNNNNNGG	8 cut(s)	209, 342, 2264, 2344, 2463, 2628, 3602, 3800
BseMI	GCAATG	3 cut(s)	1593, 2427, 4131
BseMII	CTCAG	7 cut(s)	695, 768, 1464, 2184, 2234, 3816, 3932
BseNI	ACTGG	5 cut(s)	1436, 2024, 2633, 2837, 2885
BseRI	GAGGAG	3 cut(s)	1848, 3906, 4172
BseXI	GCAGC	6 cut(s)	151, 779, 1610, 1696, 2280, 2788
BseYI	CCCAGC	2 cut(s)	2489, 3244
BsgI	GTGCAG	2 cut(s)	2196, 4041
Bsh1236I	CGCG	3 cut(s)	137, 145, 4140
BshFI	GGCC	9 cut(s)	206, 223, 902, 2268, 2377, 2494, 3601, 3951, 4026
BsiHKAI	GWGCWC	3 cut(s)	487, 822, 2221
BsiSI	CCGG	4 cut(s)	203, 282, 2495, 2665
BslFI	GGGAC	1 cut(s)	1863
BslI	CCNNNNNNNGG	8 cut(s)	209, 342, 2264, 2344, 2463, 2628, 3602, 3800
BsmAI	GTCTC	5 cut(s)	12, 219, 376, 3515, 3798
BsmFI	GGGAC	1 cut(s)	1863
BsmI	GAATGC	4 cut(s)	265, 1407, 3597, 3770
BsnI	GGCC	9 cut(s)	206, 223, 902, 2268, 2377, 2494, 3601, 3951, 4026
Bso31I	GGTCTC	3 cut(s)	12, 219, 376
Bsp119I	TTCGAA	1 cut(s)	641
Bsp1286I	GDGCHC	4 cut(s)	487, 822, 1231, 2221
Bsp1407I	TGTACA	1 cut(s)	732
Bsp19I	CCATGG	1 cut(s)	207
BspANI	GGCC	9 cut(s)	206, 223, 902, 2268, 2377, 2494, 3601, 3951, 4026
BspCNI	CTCAG	7 cut(s)	696, 769, 1463, 2183, 2233, 3817, 3931
BspFNI	CGCG	3 cut(s)	137, 145, 4140
BspLI	GGNNCC	6 cut(s)	261, 463, 514, 867, 1102, 1263
BspMI	ACCTGC	3 cut(s)	307, 1152, 2863
BspQI	GCTCTTC	1 cut(s)	810
BspT104I	TTCGAA	1 cut(s)	641
BspTNI	GGTCTC	3 cut(s)	12, 219, 376
BsrDI	GCAATG	3 cut(s)	1593, 2427, 4131
BsrFI	RCCGGY	1 cut(s)	202
BsrGI	TGTACA	1 cut(s)	732
BsrI	ACTGG	5 cut(s)	1436, 2024, 2633, 2837, 2885
BssAI	RCCGGY	1 cut(s)	202
BssNI	GRCGYC	1 cut(s)	3042
BssSI	CACGAG	1 cut(s)	74
BssT1I	CCWWGG	5 cut(s)	207, 897, 1444, 2728, 3596
Bst2BI	CACGAG	1 cut(s)	74
Bst2UI	CCWGG	8 cut(s)	342, 799, 1075, 1286, 2286, 2537, 3603, 3870
Bst6I	CTCTTC	3 cut(s)	473, 810, 4050
BstACI	GRCGYC	1 cut(s)	3042
BstAPI	GCANNNNNTGC	3 cut(s)	1625, 2639, 4148
BstAUI	TGTACA	1 cut(s)	732
BstBAI	YACGTR	2 cut(s)	1721, 3335
BstBI	TTCGAA	1 cut(s)	641
BstC8I	GCNNGC	9 cut(s)	204, 279, 1630, 1757, 2270, 2670, 2676, 4024, 4138
BstDSI	CCRYGG	2 cut(s)	207, 255
BstEII	GGTNACC	1 cut(s)	3929
BstENI	CCTNNNNNAGG	1 cut(s)	2342
BstF5I	GGATG	9 cut(s)	1504, 1668, 1780, 1812, 1849, 1914, 2591, 3240, 4054
BstFNI	CGCG	3 cut(s)	137, 145, 4140
BstH2I	RGCGCY	1 cut(s)	2675
BstHHI	GCGC	7 cut(s)	139, 147, 245, 1024, 1567, 2674, 4142
BstMAI	GTCTC	5 cut(s)	12, 219, 376, 3515, 3798
BstNI	CCWGG	8 cut(s)	342, 799, 1075, 1286, 2286, 2537, 3603, 3870
BstNSI	RCATGY	4 cut(s)	992, 2315, 2608, 3099
BstPI	GGTNACC	1 cut(s)	3929
BstSFI	CTRYAG	3 cut(s)	561, 1002, 1123
BstUI	CGCG	3 cut(s)	137, 145, 4140
BstV1I	GCAGC	6 cut(s)	151, 779, 1610, 1696, 2280, 2788
BstV2I	GAAGAC	5 cut(s)	2051, 2114, 2855, 3243, 3575
BstX2I	RGATCY	7 cut(s)	259, 1549, 1869, 2179, 2410, 2563, 4000
BstYI	RGATCY	7 cut(s)	259, 1549, 1869, 2179, 2410, 2563, 4000
Bsu36I	CCTNAGG	1 cut(s)	3918
BsuRI	GGCC	9 cut(s)	206, 223, 902, 2268, 2377, 2494, 3601, 3951, 4026
BtgI	CCRYGG	2 cut(s)	207, 255
BtrI	CACGTC	2 cut(s)	1829, 3875
BtsCI	GGATG	9 cut(s)	1504, 1668, 1780, 1812, 1849, 1914, 2591, 3240, 4054
BtsIMutI	CAGTG	3 cut(s)	2221, 2928, 4042
BveI	ACCTGC	3 cut(s)	307, 1152, 2863
Cac8I	GCNNGC	9 cut(s)	204, 279, 1630, 1757, 2270, 2670, 2676, 4024, 4138
CaiI	CAGNNNCTG	4 cut(s)	347, 674, 2371, 3017
CfoI	GCGC	7 cut(s)	139, 147, 245, 1024, 1567, 2674, 4142
Cfr10I	RCCGGY	1 cut(s)	202
Cfr13I	GGNCC	4 cut(s)	222, 1141, 2492, 2749
CseI	GACGC	1 cut(s)	2108
Csp6I	GTAC	9 cut(s)	248, 524, 733, 1151, 1277, 1518, 2246, 2509, 2725
CspCI	CAANNNNNGTGG	4 cut(s)	157, 192, 3534, 3569
CviQI	GTAC	9 cut(s)	248, 524, 733, 1151, 1277, 1518, 2246, 2509, 2725
DraI	TTTAAA	1 cut(s)	2157
DrdI	GACNNNNNNGTC	1 cut(s)	4123
DseDI	GACNNNNNNGTC	1 cut(s)	4123
EaeI	YGGCCR	2 cut(s)	204, 2375
Eam1104I	CTCTTC	3 cut(s)	473, 810, 4050
EarI	CTCTTC	3 cut(s)	473, 810, 4050
Ecl136II	GAGCTC	2 cut(s)	485, 820
Eco130I	CCWWGG	5 cut(s)	207, 897, 1444, 2728, 3596
Eco147I	AGGCCT	1 cut(s)	4026
Eco24I	GRGCYC	3 cut(s)	487, 822, 1231
Eco31I	GGTCTC	3 cut(s)	12, 219, 376
Eco32I	GATATC	2 cut(s)	657, 1201
Eco47I	GGWCC	2 cut(s)	1141, 2749
Eco53kI	GAGCTC	2 cut(s)	485, 820
Eco57I	CTGAAG	8 cut(s)	696, 2298, 2426, 2796, 3450, 3587, 3673, 3783
Eco72I	CACGTG	1 cut(s)	1721
Eco81I	CCTNAGG	1 cut(s)	3918
Eco91I	GGTNACC	1 cut(s)	3929
EcoICRI	GAGCTC	2 cut(s)	485, 820
EcoNI	CCTNNNNNAGG	1 cut(s)	2342
EcoO109I	RGGNCCY	1 cut(s)	1141
EcoO65I	GGTNACC	1 cut(s)	3929
EcoRI	GAATTC	2 cut(s)	1857, 3378
EcoRII	CCWGG	8 cut(s)	340, 797, 1073, 1284, 2284, 2535, 3601, 3868
EcoRV	GATATC	2 cut(s)	657, 1201
EcoT14I	CCWWGG	5 cut(s)	207, 897, 1444, 2728, 3596
EcoT22I	ATGCAT	2 cut(s)	1584, 3772
EcoT38I	GRGCYC	3 cut(s)	487, 822, 1231
ErhI	CCWWGG	5 cut(s)	207, 897, 1444, 2728, 3596
FaqI	GGGAC	1 cut(s)	1863
FauNDI	CATATG	1 cut(s)	376
FbaI	TGATCA	2 cut(s)	271, 4194
FblI	GTMKAC	1 cut(s)	1817
Fnu4HI	GCNGC	9 cut(s)	140, 143, 451, 616, 768, 1599, 1685, 2294, 2802
FokI	GGATG	9 cut(s)	1511, 1675, 1767, 1819, 1856, 1921, 2598, 3227, 4061
FriOI	GRGCYC	3 cut(s)	487, 822, 1231
Fsp4HI	GCNGC	9 cut(s)	140, 143, 451, 616, 768, 1599, 1685, 2294, 2802
FspBI	CTAG	8 cut(s)	852, 1332, 1947, 2528, 2654, 3116, 3206, 3936
FspI	TGCGCA	1 cut(s)	1023
GlaI	GCGC	7 cut(s)	138, 146, 244, 1023, 1566, 2673, 4141
GluI	GCNGC	9 cut(s)	140, 143, 451, 616, 768, 1599, 1685, 2294, 2802
GsaI	CCCAGC	2 cut(s)	2493, 3248
GsuI	CTGGAG	4 cut(s)	324, 1269, 1574, 1745
HaeII	RGCGCY	1 cut(s)	2675
HaeIII	GGCC	9 cut(s)	206, 223, 902, 2268, 2377, 2494, 3601, 3951, 4026
HapII	CCGG	4 cut(s)	203, 282, 2495, 2665
HgaI	GACGC	1 cut(s)	2108
HhaI	GCGC	7 cut(s)	139, 147, 245, 1024, 1567, 2674, 4142
Hin1I	GRCGYC	1 cut(s)	3042
Hin6I	GCGC	7 cut(s)	137, 145, 243, 1022, 1565, 2672, 4140
HinP1I	GCGC	7 cut(s)	137, 145, 243, 1022, 1565, 2672, 4140
HincII	GTYRAC	1 cut(s)	3537
HindII	GTYRAC	1 cut(s)	3537
HindIII	AAGCTT	2 cut(s)	2738, 3129
HpaII	CCGG	4 cut(s)	203, 282, 2495, 2665
HphI	GGTGA	7 cut(s)	395, 1145, 1517, 2999, 3617, 3626, 4007
Hpy99I	CGWCG	2 cut(s)	222, 3814
HpyCH4IV	ACGT	6 cut(s)	1720, 1828, 2056, 3042, 3334, 3874
HpySE526I	ACGT	6 cut(s)	1720, 1828, 2056, 3042, 3334, 3874
Hsp92I	GRCGYC	1 cut(s)	3042
HspAI	GCGC	7 cut(s)	137, 145, 243, 1022, 1565, 2672, 4140
KroI	GCCGGC	1 cut(s)	202
KroNI	GCCGGC	1 cut(s)	204
Ksp22I	TGATCA	2 cut(s)	271, 4194
LguI	GCTCTTC	1 cut(s)	810
LmnI	GCTCC	7 cut(s)	518, 712, 825, 1764, 2368, 3323, 3860
Lsp1109I	GCAGC	6 cut(s)	151, 779, 1610, 1696, 2280, 2788
LweI	GCATC	9 cut(s)	319, 838, 1489, 1591, 1615, 1933, 3202, 3567, 4039
MaeI	CTAG	8 cut(s)	852, 1332, 1947, 2528, 2654, 3116, 3206, 3936
MaeII	ACGT	6 cut(s)	1720, 1828, 2056, 3042, 3334, 3874
MflI	RGATCY	7 cut(s)	259, 1549, 1869, 2179, 2410, 2563, 4000
MhlI	GDGCHC	4 cut(s)	487, 822, 1231, 2221
MlyI	GAGTC	6 cut(s)	380, 2195, 2699, 3098, 3800, 3905
MmeI	TCCRAC	9 cut(s)	189, 1239, 1804, 2221, 2878, 3301, 3355, 3792, 3838
Mph1103I	ATGCAT	2 cut(s)	1584, 3772
MroNI	GCCGGC	1 cut(s)	202
MroXI	GAANNNNTTC	3 cut(s)	2058, 2997, 3420
MslI	CAYNNNNRTG	3 cut(s)	405, 2172, 2519
MspA1I	CMGCKG	2 cut(s)	1687, 2801
MspI	CCGG	4 cut(s)	203, 282, 2495, 2665
Mva1269I	GAATGC	4 cut(s)	265, 1407, 3597, 3770
MvaI	CCWGG	8 cut(s)	342, 799, 1075, 1286, 2286, 2537, 3603, 3870
MvnI	CGCG	3 cut(s)	137, 145, 4140
NaeI	GCCGGC	1 cut(s)	204
NciI	CCSGG	2 cut(s)	283, 2665
NcoI	CCATGG	1 cut(s)	207
NdeI	CATATG	1 cut(s)	376
NgoMIV	GCCGGC	1 cut(s)	202
NlaIV	GGNNCC	6 cut(s)	261, 463, 514, 867, 1102, 1263
NmuCI	GTSAC	3 cut(s)	383, 1156, 1997
NsbI	TGCGCA	1 cut(s)	1023
NsiI	ATGCAT	2 cut(s)	1584, 3772
NspI	RCATGY	4 cut(s)	992, 2315, 2608, 3099
NspV	TTCGAA	1 cut(s)	641
OliI	CACNNNNGTG	1 cut(s)	2172
PasI	CCCWGGG	1 cut(s)	1285
PceI	AGGCCT	1 cut(s)	4026
PciI	ACATGT	3 cut(s)	2311, 2604, 3095
PciSI	GCTCTTC	1 cut(s)	810
PctI	GAATGC	4 cut(s)	265, 1407, 3597, 3770
PdiI	GCCGGC	1 cut(s)	204
PdmI	GAANNNNTTC	3 cut(s)	2058, 2997, 3420
PfeI	GAWTC	8 cut(s)	976, 1031, 1343, 2438, 2590, 3434, 3514, 3986
PfoI	TCCNGGA	2 cut(s)	2284, 3868
PkrI	GCNGC	9 cut(s)	141, 144, 452, 617, 769, 1600, 1686, 2295, 2803
PleI	GAGTC	6 cut(s)	380, 2194, 2698, 3098, 3800, 3905
PmaCI	CACGTG	1 cut(s)	1721
PmlI	CACGTG	1 cut(s)	1721
PpsI	GAGTC	6 cut(s)	380, 2194, 2698, 3098, 3800, 3905
Ppu21I	YACGTR	2 cut(s)	1721, 3335
PpuMI	RGGWCCY	1 cut(s)	1141
PscI	ACATGT	3 cut(s)	2311, 2604, 3095
Psp124BI	GAGCTC	2 cut(s)	487, 822
Psp5II	RGGWCCY	1 cut(s)	1141
Psp6I	CCWGG	8 cut(s)	340, 797, 1073, 1284, 2284, 2535, 3601, 3868
PspCI	CACGTG	1 cut(s)	1721
PspEI	GGTNACC	1 cut(s)	3929
PspFI	CCCAGC	2 cut(s)	2489, 3244
PspGI	CCWGG	8 cut(s)	340, 797, 1073, 1284, 2284, 2535, 3601, 3868
PspN4I	GGNNCC	6 cut(s)	261, 463, 514, 867, 1102, 1263
PspPI	GGNCC	4 cut(s)	222, 1141, 2492, 2749
PspPPI	RGGWCCY	1 cut(s)	1141
PstNI	CAGNNNCTG	4 cut(s)	347, 674, 2371, 3017
PsuI	RGATCY	7 cut(s)	259, 1549, 1869, 2179, 2410, 2563, 4000
PvuII	CAGCTG	2 cut(s)	1687, 2801
RsaI	GTAC	9 cut(s)	249, 525, 734, 1152, 1278, 1519, 2247, 2510, 2726
RsaNI	GTAC	9 cut(s)	248, 524, 733, 1151, 1277, 1518, 2246, 2509, 2725
RseI	CAYNNNNRTG	3 cut(s)	405, 2172, 2519
SacI	GAGCTC	2 cut(s)	487, 822
SapI	GCTCTTC	1 cut(s)	810
SatI	GCNGC	9 cut(s)	140, 143, 451, 616, 768, 1599, 1685, 2294, 2802
Sau96I	GGNCC	4 cut(s)	222, 1141, 2492, 2749
SchI	GAGTC	6 cut(s)	380, 2195, 2699, 3098, 3800, 3905
SduI	GDGCHC	4 cut(s)	487, 822, 1231, 2221
SfaNI	GCATC	9 cut(s)	319, 838, 1489, 1591, 1615, 1933, 3202, 3567, 4039
SfcI	CTRYAG	3 cut(s)	561, 1002, 1123
SfuI	TTCGAA	1 cut(s)	641
SinI	GGWCC	2 cut(s)	1141, 2749
SmiMI	CAYNNNNRTG	3 cut(s)	405, 2172, 2519
SmlI	CTYRAG	2 cut(s)	2183, 2354
SmoI	CTYRAG	2 cut(s)	2183, 2354
SseBI	AGGCCT	1 cut(s)	4026
SspI	AATATT	3 cut(s)	1768, 3112, 3340
SspMI	CTAG	8 cut(s)	852, 1332, 1947, 2528, 2654, 3116, 3206, 3936
SstI	GAGCTC	2 cut(s)	487, 822
StuI	AGGCCT	1 cut(s)	4026
StyI	CCWWGG	5 cut(s)	207, 897, 1444, 2728, 3596
TaiI	ACGT	6 cut(s)	1723, 1831, 2059, 3045, 3337, 3877
TaqI	TCGA	9 cut(s)	57, 117, 641, 1792, 1861, 2827, 3517, 4155, 4185
TatI	WGTACW	5 cut(s)	247, 732, 1276, 2245, 2508
TauI	GCSGC	3 cut(s)	145, 453, 618
TfiI	GAWTC	8 cut(s)	976, 1031, 1343, 2438, 2590, 3434, 3514, 3986
TscAI	CASTG	3 cut(s)	2221, 2935, 4042
TseFI	GTSAC	3 cut(s)	383, 1156, 1997
TseI	GCWGC	6 cut(s)	139, 767, 1598, 1684, 2293, 2801
Tsp45I	GTSAC	3 cut(s)	383, 1156, 1997
TspGWI	ACGGA	5 cut(s)	272, 511, 1093, 1819, 2777
TspRI	CASTG	3 cut(s)	2221, 2935, 4042
VpaK11BI	GGWCC	2 cut(s)	1141, 2749
XagI	CCTNNNNNAGG	1 cut(s)	2342
XapI	RAATTY	7 cut(s)	170, 362, 690, 1857, 2997, 3378, 3465
XbaI	TCTAGA	1 cut(s)	2527
XceI	RCATGY	4 cut(s)	992, 2315, 2608, 3099
XmiI	GTMKAC	1 cut(s)	1817
XmnI	GAANNNNTTC	3 cut(s)	2058, 2997, 3420
XspI	CTAG	8 cut(s)	852, 1332, 1947, 2528, 2654, 3116, 3206, 3936
ZraI	GACGTC	1 cut(s)	3043
Zsp2I	ATGCAT	2 cut(s)	1584, 3772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.