3-isopropylmalate dehydratase small
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g28310 |
| rosa_chinensis | RchiOBHm_Chr3g0496791 |
| rosa_laevigata | RLG00000008047 RLG00000022502 RLG00000027947 |
| rosa_multiflora | Rmu_sc0004684.1_g000029 Rmu_sc0013168.1_g000001 Rmu_sc0013725.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00136000 Rroxscaffold_6G00388700 |
| rosa_rugosa | Rorug03G0287300 |
| rosa_samantha | Rh3AG331500 Rh3BG343000 Rh3BG368000 Rh3CG364400 Rh3DG367600 Rh7DG330000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 72 |
| AciI | CCGC | 3 cut(s) | 125, 128, 140 |
| AcoI | YGGCCR | 1 cut(s) | 186 |
| AfaI | GTAC | 1 cut(s) | 203 |
| AgsI | TTSAA | 2 cut(s) | 47, 217 |
| AluBI | AGCT | 1 cut(s) | 55 |
| AluI | AGCT | 1 cut(s) | 55 |
| Alw21I | GWGCWC | 1 cut(s) | 57 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 137 |
| AoxI | GGCC | 1 cut(s) | 186 |
| ApeKI | GCWGC | 1 cut(s) | 137 |
| AspLEI | GCGC | 1 cut(s) | 109 |
| BalI | TGGCCA | 1 cut(s) | 188 |
| BanII | GRGCYC | 1 cut(s) | 57 |
| BbsI | GAAGAC | 1 cut(s) | 224 |
| Bbv12I | GWGCWC | 1 cut(s) | 57 |
| BbvI | GCAGC | 1 cut(s) | 124 |
| BccI | CCATC | 1 cut(s) | 8 |
| BceAI | ACGGC | 1 cut(s) | 91 |
| BfaI | CTAG | 1 cut(s) | 209 |
| BisI | GCNGC | 3 cut(s) | 126, 129, 138 |
| BlsI | GCNGC | 3 cut(s) | 127, 130, 139 |
| BmsI | GCATC | 1 cut(s) | 174 |
| BpiI | GAAGAC | 1 cut(s) | 224 |
| Bse1I | ACTGG | 1 cut(s) | 110 |
| BseNI | ACTGG | 1 cut(s) | 110 |
| BseXI | GCAGC | 1 cut(s) | 124 |
| BshFI | GGCC | 1 cut(s) | 188 |
| BsiHKAI | GWGCWC | 1 cut(s) | 57 |
| BsmI | GAATGC | 1 cut(s) | 109 |
| BsnI | GGCC | 1 cut(s) | 188 |
| Bsp1286I | GDGCHC | 1 cut(s) | 57 |
| BspACI | CCGC | 3 cut(s) | 125, 128, 140 |
| BspANI | GGCC | 1 cut(s) | 188 |
| BsrI | ACTGG | 1 cut(s) | 110 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 137 |
| BstC8I | GCNNGC | 1 cut(s) | 163 |
| BstHHI | GCGC | 1 cut(s) | 109 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 113, 122, 134, 137 |
| BstV1I | GCAGC | 1 cut(s) | 124 |
| BstV2I | GAAGAC | 1 cut(s) | 224 |
| BsuRI | GGCC | 1 cut(s) | 188 |
| BtsI | GCAGTG | 1 cut(s) | 138 |
| BtsIMutI | CAGTG | 2 cut(s) | 117, 138 |
| Cac8I | GCNNGC | 1 cut(s) | 163 |
| CaiI | CAGNNNCTG | 1 cut(s) | 137 |
| CfoI | GCGC | 1 cut(s) | 109 |
| CseI | GACGC | 1 cut(s) | 92 |
| Csp6I | GTAC | 1 cut(s) | 202 |
| CviJI | RGCY | 5 cut(s) | 55, 78, 116, 137, 188 |
| CviKI_1 | RGCY | 5 cut(s) | 55, 78, 116, 137, 188 |
| CviQI | GTAC | 1 cut(s) | 202 |
| EaeI | YGGCCR | 1 cut(s) | 186 |
| Ecl136II | GAGCTC | 1 cut(s) | 55 |
| Eco24I | GRGCYC | 1 cut(s) | 57 |
| Eco53kI | GAGCTC | 1 cut(s) | 55 |
| EcoICRI | GAGCTC | 1 cut(s) | 55 |
| EcoT38I | GRGCYC | 1 cut(s) | 57 |
| FblI | GTMKAC | 1 cut(s) | 72 |
| Fnu4HI | GCNGC | 3 cut(s) | 126, 129, 138 |
| FriOI | GRGCYC | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 3 cut(s) | 126, 129, 138 |
| FspBI | CTAG | 1 cut(s) | 209 |
| GlaI | GCGC | 1 cut(s) | 108 |
| GluI | GCNGC | 3 cut(s) | 126, 129, 138 |
| HaeIII | GGCC | 1 cut(s) | 188 |
| HgaI | GACGC | 1 cut(s) | 92 |
| HhaI | GCGC | 1 cut(s) | 109 |
| Hin6I | GCGC | 1 cut(s) | 107 |
| HinP1I | GCGC | 1 cut(s) | 107 |
| HinfI | GANTC | 1 cut(s) | 152 |
| Hpy166II | GTNNAC | 2 cut(s) | 73, 202 |
| Hpy188III | TCNNGA | 2 cut(s) | 175, 209 |
| Hpy8I | GTNNAC | 2 cut(s) | 73, 202 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 86 |
| HpyCH4IV | ACGT | 1 cut(s) | 93 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 113, 122, 134, 137 |
| HpySE526I | ACGT | 1 cut(s) | 93 |
| HspAI | GCGC | 1 cut(s) | 107 |
| LmnI | GCTCC | 1 cut(s) | 60 |
| LpnPI | CCDG | 1 cut(s) | 123 |
| Lsp1109I | GCAGC | 1 cut(s) | 124 |
| LweI | GCATC | 1 cut(s) | 174 |
| MaeI | CTAG | 1 cut(s) | 209 |
| MaeII | ACGT | 1 cut(s) | 93 |
| MaeIII | GTNAC | 1 cut(s) | 94 |
| MboII | GAAGA | 5 cut(s) | 22, 55, 160, 163, 229 |
| MhlI | GDGCHC | 1 cut(s) | 57 |
| MlsI | TGGCCA | 1 cut(s) | 188 |
| MluCI | AATT | 3 cut(s) | 48, 212, 226 |
| MluNI | TGGCCA | 1 cut(s) | 188 |
| MlyI | GAGTC | 1 cut(s) | 161 |
| MnlI | CCTC | 3 cut(s) | 44, 216, 216 |
| Mox20I | TGGCCA | 1 cut(s) | 188 |
| MscI | TGGCCA | 1 cut(s) | 188 |
| MseI | TTAA | 1 cut(s) | 90 |
| Msp20I | TGGCCA | 1 cut(s) | 188 |
| Mva1269I | GAATGC | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 113, 122, 134, 137 |
| NmuCI | GTSAC | 1 cut(s) | 94 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 90 |
| PctI | GAATGC | 1 cut(s) | 109 |
| PkrI | GCNGC | 3 cut(s) | 127, 130, 139 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| Psp124BI | GAGCTC | 1 cut(s) | 57 |
| PstNI | CAGNNNCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 203 |
| RsaNI | GTAC | 1 cut(s) | 202 |
| SacI | GAGCTC | 1 cut(s) | 57 |
| SaqAI | TTAA | 1 cut(s) | 90 |
| SatI | GCNGC | 3 cut(s) | 126, 129, 138 |
| SchI | GAGTC | 1 cut(s) | 161 |
| SduI | GDGCHC | 1 cut(s) | 57 |
| SetI | ASST | 3 cut(s) | 57, 96, 201 |
| SfaNI | GCATC | 1 cut(s) | 174 |
| SgeI | CNNG | 7 cut(s) | 122, 131, 174, 187, 193, 208, 221 |
| Sse9I | AATT | 3 cut(s) | 48, 212, 226 |
| SsiI | CCGC | 3 cut(s) | 125, 128, 140 |
| SspMI | CTAG | 1 cut(s) | 209 |
| SstI | GAGCTC | 1 cut(s) | 57 |
| TaiI | ACGT | 1 cut(s) | 96 |
| TaqI | TCGA | 1 cut(s) | 81 |
| TasI | AATT | 3 cut(s) | 48, 212, 226 |
| TauI | GCSGC | 2 cut(s) | 128, 131 |
| Tru1I | TTAA | 1 cut(s) | 90 |
| Tru9I | TTAA | 1 cut(s) | 90 |
| TscAI | CASTG | 2 cut(s) | 117, 138 |
| TseFI | GTSAC | 1 cut(s) | 94 |
| TseI | GCWGC | 1 cut(s) | 137 |
| Tsp45I | GTSAC | 1 cut(s) | 94 |
| TspRI | CASTG | 2 cut(s) | 117, 138 |
| XbaI | TCTAGA | 1 cut(s) | 208 |
| XmiI | GTMKAC | 1 cut(s) | 72 |
| XspI | CTAG | 1 cut(s) | 209 |