Photosystem II (PSII) is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1 D2 (PsbA PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00020 |
| rosa_chinensis | RchiOBHm_Chr1g0354591 RchiOBHm_Chr4g0432801 RchiOBHm_Chr7g0221101 RchiOBHm_CPg0502541 |
| rosa_laevigata | RLG00000000009 RLG00000000033 RLG00000000034 RLG00000000052 RLG00000000092 RLG00000000170 RLG00000000237 RLG00000000252 RLG00000000308 RLG00000002779 RLG00000029143 RLG00000029290 |
| rosa_multiflora | Rmu_sc0003316.1_g000010 Rmu_sc0017755.1_g000007 Rmu_sc0017755.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00119130 Rroxscaffold_7G00179730 |
| rosa_rugosa | RorugMtG0001300 |
| rosa_samantha | Rh1AG125200 Rh1AG254400 Rh1CG119100 Rh4AG317100 Rh4DG320500 |
| rosa_wichuraiana | Rw6G019460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 239 |
| AciI | CCGC | 2 cut(s) | 129, 296 |
| AclWI | GGATC | 2 cut(s) | 106, 214 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 203, 289 |
| AjiI | CACGTC | 1 cut(s) | 23 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 387, 419 |
| AluBI | AGCT | 5 cut(s) | 263, 340, 371, 446, 458 |
| AluI | AGCT | 5 cut(s) | 263, 340, 371, 446, 458 |
| Alw26I | GTCTC | 1 cut(s) | 13 |
| AlwI | GGATC | 2 cut(s) | 106, 214 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 449 |
| ApeKI | GCWGC | 4 cut(s) | 161, 260, 455, 458 |
| AspLEI | GCGC | 1 cut(s) | 420 |
| AspS9I | GGNCC | 1 cut(s) | 329 |
| AvaII | GGWCC | 1 cut(s) | 329 |
| BanI | GGYRCC | 1 cut(s) | 239 |
| BbvI | GCAGC | 4 cut(s) | 148, 272, 445, 467 |
| BccI | CCATC | 2 cut(s) | 87, 176 |
| BcoDI | GTCTC | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 475 |
| BfmI | CTRYAG | 2 cut(s) | 258, 264 |
| BisI | GCNGC | 5 cut(s) | 162, 261, 297, 456, 459 |
| BlsI | GCNGC | 5 cut(s) | 163, 262, 298, 457, 460 |
| Bme18I | GGWCC | 1 cut(s) | 329 |
| BmgBI | CACGTC | 1 cut(s) | 23 |
| BmgT120I | GGNCC | 1 cut(s) | 329 |
| BmiI | GGNNCC | 1 cut(s) | 241 |
| BsaJI | CCNNGG | 1 cut(s) | 422 |
| BsaWI | WCCGGW | 1 cut(s) | 169 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 203, 289 |
| Bse3DI | GCAATG | 1 cut(s) | 156 |
| BseDI | CCNNGG | 1 cut(s) | 422 |
| BseGI | GGATG | 1 cut(s) | 98 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 203, 289 |
| BseMI | GCAATG | 1 cut(s) | 156 |
| BseXI | GCAGC | 4 cut(s) | 148, 272, 445, 467 |
| BsgI | GTGCAG | 1 cut(s) | 147 |
| BshNI | GGYRCC | 1 cut(s) | 239 |
| BsiSI | CCGG | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 203, 289 |
| BsmAI | GTCTC | 1 cut(s) | 13 |
| BsmBI | CGTCTC | 1 cut(s) | 13 |
| Bsp143I | GATC | 2 cut(s) | 111, 206 |
| BspACI | CCGC | 2 cut(s) | 129, 296 |
| BspHI | TCATGA | 1 cut(s) | 385 |
| BspLI | GGNNCC | 1 cut(s) | 241 |
| BspMAI | CTGCAG | 1 cut(s) | 262 |
| BspPI | GGATC | 2 cut(s) | 106, 214 |
| BspT107I | GGYRCC | 1 cut(s) | 239 |
| BsrDI | GCAATG | 1 cut(s) | 156 |
| BssECI | CCNNGG | 1 cut(s) | 422 |
| BssMI | GATC | 2 cut(s) | 111, 206 |
| BssT1I | CCWWGG | 1 cut(s) | 422 |
| Bst4CI | ACNGT | 2 cut(s) | 80, 326 |
| BstC8I | GCNNGC | 1 cut(s) | 373 |
| BstDEI | CTNAG | 1 cut(s) | 398 |
| BstF5I | GGATG | 1 cut(s) | 98 |
| BstHHI | GCGC | 1 cut(s) | 420 |
| BstKTI | GATC | 2 cut(s) | 114, 209 |
| BstMAI | GTCTC | 1 cut(s) | 13 |
| BstMBI | GATC | 2 cut(s) | 111, 206 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 158, 443, 452, 464 |
| BstSFI | CTRYAG | 2 cut(s) | 258, 264 |
| BstV1I | GCAGC | 4 cut(s) | 148, 272, 445, 467 |
| BstX2I | RGATCY | 1 cut(s) | 206 |
| BstYI | RGATCY | 1 cut(s) | 206 |
| BtrI | CACGTC | 1 cut(s) | 23 |
| BtsCI | GGATG | 1 cut(s) | 98 |
| BtsIMutI | CAGTG | 1 cut(s) | 69 |
| Cac8I | GCNNGC | 1 cut(s) | 373 |
| CaiI | CAGNNNCTG | 1 cut(s) | 449 |
| CciI | TCATGA | 1 cut(s) | 385 |
| CfoI | GCGC | 1 cut(s) | 420 |
| Cfr13I | GGNCC | 1 cut(s) | 329 |
| CviAII | CATG | 2 cut(s) | 379, 386 |
| CviJI | RGCY | 7 cut(s) | 36, 263, 299, 340, 371, 446, 458 |
| CviKI_1 | RGCY | 7 cut(s) | 36, 263, 299, 340, 371, 446, 458 |
| DdeI | CTNAG | 1 cut(s) | 398 |
| DpnI | GATC | 2 cut(s) | 113, 208 |
| DpnII | GATC | 2 cut(s) | 111, 206 |
| Eco130I | CCWWGG | 1 cut(s) | 422 |
| Eco47I | GGWCC | 1 cut(s) | 329 |
| EcoT14I | CCWWGG | 1 cut(s) | 422 |
| ErhI | CCWWGG | 1 cut(s) | 422 |
| Esp3I | CGTCTC | 1 cut(s) | 13 |
| FaeI | CATG | 2 cut(s) | 382, 389 |
| FaiI | YATR | 9 cut(s) | 40, 266, 289, 319, 336, 380, 387, 416, 439 |
| FatI | CATG | 2 cut(s) | 378, 385 |
| Fnu4HI | GCNGC | 5 cut(s) | 162, 261, 297, 456, 459 |
| FokI | GGATG | 1 cut(s) | 105 |
| Fsp4HI | GCNGC | 5 cut(s) | 162, 261, 297, 456, 459 |
| FspBI | CTAG | 1 cut(s) | 475 |
| GlaI | GCGC | 1 cut(s) | 419 |
| GluI | GCNGC | 5 cut(s) | 162, 261, 297, 456, 459 |
| HapII | CCGG | 1 cut(s) | 170 |
| HhaI | GCGC | 1 cut(s) | 420 |
| Hin1II | CATG | 2 cut(s) | 382, 389 |
| Hin6I | GCGC | 1 cut(s) | 418 |
| HinP1I | GCGC | 1 cut(s) | 418 |
| HpaII | CCGG | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 194 |
| Hpy188III | TCNNGA | 3 cut(s) | 191, 204, 386 |
| Hpy8I | GTNNAC | 1 cut(s) | 194 |
| HpyCH4III | ACNGT | 2 cut(s) | 80, 326 |
| HpyCH4IV | ACGT | 1 cut(s) | 22 |
| HpyCH4V | TGCA | 6 cut(s) | 8, 164, 260, 274, 437, 455 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 158, 443, 452, 464 |
| HpyF3I | CTNAG | 1 cut(s) | 398 |
| HpySE526I | ACGT | 1 cut(s) | 22 |
| Hsp92II | CATG | 2 cut(s) | 382, 389 |
| HspAI | GCGC | 1 cut(s) | 418 |
| Kzo9I | GATC | 2 cut(s) | 111, 206 |
| LmnI | GCTCC | 1 cut(s) | 451 |
| LpnPI | CCDG | 7 cut(s) | 79, 183, 189, 210, 222, 395, 462 |
| Lsp1109I | GCAGC | 4 cut(s) | 148, 272, 445, 467 |
| MaeI | CTAG | 1 cut(s) | 475 |
| MaeII | ACGT | 1 cut(s) | 22 |
| MalI | GATC | 2 cut(s) | 113, 208 |
| MboI | GATC | 2 cut(s) | 111, 206 |
| MflI | RGATCY | 1 cut(s) | 206 |
| MluCI | AATT | 3 cut(s) | 9, 55, 342 |
| MnlI | CCTC | 1 cut(s) | 177 |
| MspA1I | CMGCKG | 1 cut(s) | 458 |
| MspI | CCGG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 158, 443, 452, 464 |
| NdeII | GATC | 2 cut(s) | 111, 206 |
| NlaIII | CATG | 2 cut(s) | 382, 389 |
| NlaIV | GGNNCC | 1 cut(s) | 241 |
| PagI | TCATGA | 1 cut(s) | 385 |
| PkrI | GCNGC | 5 cut(s) | 163, 262, 298, 457, 460 |
| PspN4I | GGNNCC | 1 cut(s) | 241 |
| PspPI | GGNCC | 1 cut(s) | 329 |
| PstI | CTGCAG | 1 cut(s) | 262 |
| PstNI | CAGNNNCTG | 1 cut(s) | 449 |
| PsuI | RGATCY | 1 cut(s) | 206 |
| PvuII | CAGCTG | 1 cut(s) | 458 |
| SatI | GCNGC | 5 cut(s) | 162, 261, 297, 456, 459 |
| Sau3AI | GATC | 2 cut(s) | 111, 206 |
| Sau96I | GGNCC | 1 cut(s) | 329 |
| SetI | ASST | 9 cut(s) | 25, 169, 199, 265, 271, 342, 373, 448, 460 |
| SfcI | CTRYAG | 2 cut(s) | 258, 264 |
| SinI | GGWCC | 1 cut(s) | 329 |
| Sse9I | AATT | 3 cut(s) | 9, 55, 342 |
| SsiI | CCGC | 2 cut(s) | 129, 296 |
| SspI | AATATT | 1 cut(s) | 229 |
| SspMI | CTAG | 1 cut(s) | 475 |
| StyI | CCWWGG | 1 cut(s) | 422 |
| TaaI | ACNGT | 2 cut(s) | 80, 326 |
| TaiI | ACGT | 1 cut(s) | 25 |
| TasI | AATT | 3 cut(s) | 9, 55, 342 |
| TauI | GCSGC | 1 cut(s) | 299 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseI | GCWGC | 4 cut(s) | 161, 260, 455, 458 |
| TspDTI | ATGAA | 2 cut(s) | 145, 324 |
| TspGWI | ACGGA | 3 cut(s) | 234, 292, 395 |
| TspRI | CASTG | 1 cut(s) | 76 |
| VpaK11BI | GGWCC | 1 cut(s) | 329 |
| XspI | CTAG | 1 cut(s) | 475 |